####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS312_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS312_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 34 - 42 4.87 77.88 LCS_AVERAGE: 17.82 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 1.06 93.80 LONGEST_CONTINUOUS_SEGMENT: 5 28 - 32 1.87 52.11 LONGEST_CONTINUOUS_SEGMENT: 5 29 - 33 1.81 55.05 LONGEST_CONTINUOUS_SEGMENT: 5 33 - 37 1.77 73.92 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 1.59 74.88 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 1.75 89.69 LCS_AVERAGE: 9.66 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.82 94.05 LONGEST_CONTINUOUS_SEGMENT: 4 3 - 6 0.82 94.07 LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.77 92.37 LCS_AVERAGE: 4.18 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 7 0 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT V 3 V 3 4 5 7 3 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT Q 4 Q 4 4 5 7 3 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT G 5 G 5 4 5 7 3 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 9 9 LCS_GDT P 6 P 6 4 5 7 0 3 5 5 5 5 5 5 6 6 6 6 7 7 8 8 8 8 9 9 LCS_GDT W 7 W 7 0 4 7 0 0 3 4 4 4 5 5 6 6 6 6 7 7 8 8 8 8 9 9 LCS_GDT V 8 V 8 0 4 7 0 0 3 4 4 4 5 5 5 5 6 6 7 7 8 8 8 8 9 9 LCS_GDT G 9 G 9 0 4 7 0 0 3 4 4 4 5 5 5 5 6 6 7 7 8 8 8 8 9 9 LCS_GDT S 10 S 10 0 3 7 0 0 3 3 3 3 5 5 5 5 6 6 7 7 8 8 8 8 9 9 LCS_GDT S 11 S 11 0 3 7 0 1 3 3 3 3 3 4 4 5 5 6 7 7 8 8 8 8 9 9 LCS_GDT Y 12 Y 12 0 3 7 0 0 3 3 3 3 3 4 4 5 5 6 7 7 8 8 8 8 9 9 LCS_GDT V 13 V 13 0 3 7 0 0 3 3 3 3 3 4 4 5 5 6 6 7 8 8 8 8 9 9 LCS_GDT A 14 A 14 0 3 8 0 0 3 3 3 3 4 4 5 5 5 6 7 7 7 7 9 9 9 9 LCS_GDT E 15 E 15 0 4 8 0 0 3 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT T 16 T 16 3 4 8 0 0 3 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT G 17 G 17 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT Q 18 Q 18 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT N 19 N 19 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT W 20 W 20 3 4 8 0 3 4 4 4 4 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT A 21 A 21 3 4 8 0 3 3 4 4 4 5 5 6 6 6 6 6 7 8 8 9 9 9 9 LCS_GDT S 22 S 22 0 4 8 0 1 3 4 4 4 4 4 6 6 6 6 6 7 8 8 9 9 9 9 LCS_GDT L 23 L 23 0 3 7 0 0 3 3 3 3 3 4 4 5 6 6 6 7 7 7 8 8 8 9 LCS_GDT A 24 A 24 0 3 7 0 1 3 3 3 3 3 4 4 5 6 6 6 7 7 7 8 8 8 9 LCS_GDT A 25 A 25 0 3 7 0 0 3 3 3 3 3 4 4 5 6 6 6 7 7 7 8 8 8 9 LCS_GDT N 26 N 26 0 3 7 0 0 3 3 3 3 3 4 4 5 6 6 6 7 7 7 8 8 8 9 LCS_GDT E 27 E 27 0 3 8 0 0 3 3 4 4 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT L 28 L 28 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT R 29 R 29 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT V 30 V 30 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT T 31 T 31 3 5 8 0 3 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT E 32 E 32 3 5 8 0 3 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT R 33 R 33 3 5 8 0 3 3 4 5 5 6 6 6 7 7 7 8 8 8 9 10 10 10 10 LCS_GDT P 34 P 34 3 5 9 3 3 4 4 5 5 6 6 6 7 7 8 9 9 9 9 10 10 10 10 LCS_GDT F 35 F 35 3 5 9 3 3 4 4 5 5 6 6 6 6 6 8 9 9 9 9 10 10 10 10 LCS_GDT W 36 W 36 3 5 9 3 3 4 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT I 37 I 37 3 5 9 0 2 4 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT S 38 S 38 0 5 9 0 0 3 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT S 39 S 39 0 4 9 0 0 3 3 4 4 5 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT F 40 F 40 3 4 9 0 3 3 3 4 4 5 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT I 41 I 41 3 5 9 0 3 3 4 4 5 5 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT G 42 G 42 4 5 9 0 4 4 4 4 5 5 5 6 6 7 7 9 9 9 9 10 10 10 10 LCS_GDT R 43 R 43 4 5 8 3 4 4 4 4 5 5 5 6 6 7 7 8 8 8 9 9 9 10 10 LCS_GDT S 44 S 44 4 5 8 3 4 4 4 4 5 5 5 6 6 7 7 8 8 8 9 9 9 9 10 LCS_GDT K 45 K 45 4 5 8 3 4 4 4 4 5 5 5 5 5 6 7 8 8 8 8 8 8 9 10 LCS_AVERAGE LCS_A: 10.55 ( 4.18 9.66 17.82 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 4 5 5 5 5 6 6 6 7 7 8 9 9 9 9 10 10 10 10 GDT PERCENT_AT 6.82 9.09 11.36 11.36 11.36 11.36 13.64 13.64 13.64 15.91 15.91 18.18 20.45 20.45 20.45 20.45 22.73 22.73 22.73 22.73 GDT RMS_LOCAL 0.38 0.77 1.06 1.06 1.06 1.06 2.14 2.14 2.14 2.97 2.97 4.58 4.87 4.87 4.87 4.87 5.53 5.53 5.53 5.53 GDT RMS_ALL_AT 94.93 92.37 93.80 93.80 93.80 93.80 74.12 74.12 74.12 54.74 54.74 77.44 77.88 77.88 77.88 77.88 77.11 77.11 77.11 77.11 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 140.930 0 0.201 0.243 143.156 0.000 0.000 - LGA V 3 V 3 136.184 0 0.221 0.398 137.354 0.000 0.000 133.232 LGA Q 4 Q 4 134.949 0 0.242 1.397 140.786 0.000 0.000 140.786 LGA G 5 G 5 131.470 0 0.215 0.215 132.501 0.000 0.000 - LGA P 6 P 6 128.558 0 0.678 0.792 131.829 0.000 0.000 130.786 LGA W 7 W 7 124.303 0 0.493 1.160 129.618 0.000 0.000 129.618 LGA V 8 V 8 117.020 0 0.566 1.252 119.469 0.000 0.000 115.722 LGA G 9 G 9 112.086 0 0.513 0.513 113.934 0.000 0.000 - LGA S 10 S 10 110.867 0 0.597 0.651 113.118 0.000 0.000 113.118 LGA S 11 S 11 107.587 0 0.475 0.821 108.879 0.000 0.000 108.879 LGA Y 12 Y 12 100.127 0 0.560 1.159 102.563 0.000 0.000 95.435 LGA V 13 V 13 96.799 0 0.511 0.711 98.077 0.000 0.000 95.839 LGA A 14 A 14 95.838 0 0.546 0.592 97.074 0.000 0.000 - LGA E 15 E 15 90.411 0 0.551 1.253 92.047 0.000 0.000 91.271 LGA T 16 T 16 83.122 0 0.686 0.636 85.814 0.000 0.000 82.638 LGA G 17 G 17 80.030 0 0.753 0.753 81.636 0.000 0.000 - LGA Q 18 Q 18 73.871 0 0.284 0.818 75.995 0.000 0.000 70.403 LGA N 19 N 19 70.381 0 0.538 0.643 74.395 0.000 0.000 74.395 LGA W 20 W 20 62.985 0 0.254 1.264 65.562 0.000 0.000 60.374 LGA A 21 A 21 58.563 0 0.540 0.514 60.134 0.000 0.000 - LGA S 22 S 22 51.417 0 0.524 0.660 53.660 0.000 0.000 51.363 LGA L 23 L 23 49.285 0 0.557 0.693 50.129 0.000 0.000 49.540 LGA A 24 A 24 48.384 0 0.540 0.578 49.135 0.000 0.000 - LGA A 25 A 25 42.461 0 0.500 0.549 44.207 0.000 0.000 - LGA N 26 N 26 37.509 0 0.526 1.301 39.206 0.000 0.000 34.234 LGA E 27 E 27 37.634 0 0.581 0.776 38.270 0.000 0.000 37.034 LGA L 28 L 28 34.491 0 0.465 1.183 37.440 0.000 0.000 35.283 LGA R 29 R 29 27.792 0 0.465 1.654 30.003 0.000 0.000 29.601 LGA V 30 V 30 22.180 0 0.394 0.714 25.991 0.000 0.000 21.555 LGA T 31 T 31 14.729 0 0.581 0.657 17.468 0.000 0.000 16.200 LGA E 32 E 32 10.063 0 0.335 1.335 17.598 0.000 0.000 16.618 LGA R 33 R 33 3.375 0 0.433 1.651 5.503 24.091 13.884 5.319 LGA P 34 P 34 1.592 0 0.443 0.949 4.422 65.909 43.117 4.422 LGA F 35 F 35 0.887 0 0.473 1.536 9.465 71.364 28.595 9.465 LGA W 36 W 36 0.689 0 0.200 1.277 6.299 77.727 45.584 3.398 LGA I 37 I 37 1.938 0 0.603 1.469 3.914 41.364 45.000 1.660 LGA S 38 S 38 2.939 0 0.552 0.682 4.951 18.182 18.182 3.315 LGA S 39 S 39 9.487 0 0.598 0.671 12.019 0.000 0.000 10.894 LGA F 40 F 40 12.440 0 0.534 1.042 18.045 0.000 0.000 18.045 LGA I 41 I 41 12.552 0 0.160 0.694 14.125 0.000 0.000 10.842 LGA G 42 G 42 16.006 0 0.557 0.557 18.936 0.000 0.000 - LGA R 43 R 43 22.496 0 0.271 1.304 27.823 0.000 0.000 26.878 LGA S 44 S 44 27.138 0 0.314 0.311 30.250 0.000 0.000 26.140 LGA K 45 K 45 33.327 0 0.211 1.145 35.223 0.000 0.000 31.478 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 45.194 45.150 44.775 6.787 4.417 2.649 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 6 2.14 13.636 12.911 0.267 LGA_LOCAL RMSD: 2.144 Number of atoms: 6 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 74.121 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 45.194 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.547543 * X + -0.065302 * Y + 0.834226 * Z + 76.450043 Y_new = 0.805118 * X + -0.230523 * Y + -0.546483 * Z + 19.483152 Z_new = 0.227994 * X + 0.970873 * Y + -0.073645 * Z + -29.947035 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.973566 -0.230017 1.646506 [DEG: 55.7812 -13.1790 94.3378 ] ZXZ: 0.990859 1.644508 0.230655 [DEG: 56.7720 94.2234 13.2156 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS312_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS312_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 6 2.14 12.911 45.19 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS312_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 5D7W_A ATOM 9 N ALA 2 -116.186 72.078 66.904 1.00 0.00 ATOM 10 CA ALA 2 -115.194 72.297 65.888 1.00 0.00 ATOM 11 CB ALA 2 -114.542 73.385 66.727 1.00 0.00 ATOM 12 C ALA 2 -114.275 71.485 65.024 1.00 0.00 ATOM 13 O ALA 2 -114.516 70.313 65.289 1.00 0.00 ATOM 14 N VAL 3 -113.198 71.743 64.288 1.00 0.00 ATOM 15 CA VAL 3 -112.315 70.695 63.800 1.00 0.00 ATOM 16 CB VAL 3 -112.094 69.868 62.517 1.00 0.00 ATOM 17 CG1 VAL 3 -111.534 68.497 62.869 1.00 0.00 ATOM 18 CG2 VAL 3 -113.403 69.726 61.762 1.00 0.00 ATOM 19 C VAL 3 -110.781 70.530 63.772 1.00 0.00 ATOM 20 O VAL 3 -110.230 71.439 64.381 1.00 0.00 ATOM 21 N GLN 4 -110.016 69.727 63.039 1.00 0.00 ATOM 22 CA GLN 4 -108.548 69.970 62.950 1.00 0.00 ATOM 23 CB GLN 4 -107.768 70.120 64.237 1.00 0.00 ATOM 24 CG GLN 4 -107.169 71.500 64.408 1.00 0.00 ATOM 25 CD GLN 4 -108.118 72.479 65.064 1.00 0.00 ATOM 26 OE1 GLN 4 -109.233 72.747 64.589 1.00 0.00 ATOM 27 NE2 GLN 4 -107.688 73.058 66.189 1.00 0.00 ATOM 28 C GLN 4 -107.592 69.922 61.711 1.00 0.00 ATOM 29 O GLN 4 -108.178 69.971 60.635 1.00 0.00 ATOM 30 N GLY 5 -106.277 69.731 61.689 1.00 0.00 ATOM 31 CA GLY 5 -105.568 69.416 60.468 1.00 0.00 ATOM 32 C GLY 5 -104.407 68.576 60.036 1.00 0.00 ATOM 33 O GLY 5 -104.125 67.816 60.955 1.00 0.00 ATOM 34 N PRO 6 -103.599 68.597 58.981 1.00 0.00 ATOM 35 CA PRO 6 -102.397 67.806 58.838 1.00 0.00 ATOM 36 CB PRO 6 -102.840 67.341 57.454 1.00 0.00 ATOM 37 CG PRO 6 -103.216 68.620 56.732 1.00 0.00 ATOM 38 CD PRO 6 -103.497 69.694 57.776 1.00 0.00 ATOM 39 C PRO 6 -101.223 67.549 58.313 1.00 0.00 ATOM 40 O PRO 6 -101.253 68.618 57.854 1.00 0.00 ATOM 41 N TRP 7 -100.076 66.918 58.147 1.00 0.00 ATOM 42 CA TRP 7 -98.723 67.687 57.468 1.00 0.00 ATOM 43 CB TRP 7 -97.826 67.983 58.666 1.00 0.00 ATOM 44 CG TRP 7 -97.686 66.791 59.578 1.00 0.00 ATOM 45 CD1 TRP 7 -96.823 65.742 59.431 1.00 0.00 ATOM 46 CD2 TRP 7 -98.467 66.503 60.745 1.00 0.00 ATOM 47 NE1 TRP 7 -97.018 64.814 60.432 1.00 0.00 ATOM 48 CE2 TRP 7 -98.022 65.255 61.253 1.00 0.00 ATOM 49 CE3 TRP 7 -99.500 67.177 61.412 1.00 0.00 ATOM 50 CZ2 TRP 7 -98.578 64.667 62.399 1.00 0.00 ATOM 51 CZ3 TRP 7 -100.055 66.589 62.555 1.00 0.00 ATOM 52 CH2 TRP 7 -99.590 65.346 63.033 1.00 0.00 ATOM 53 C TRP 7 -97.893 67.090 56.251 1.00 0.00 ATOM 54 O TRP 7 -98.359 66.012 55.904 1.00 0.00 ATOM 55 N VAL 8 -96.694 67.424 55.784 1.00 0.00 ATOM 56 CA VAL 8 -95.904 66.283 55.104 1.00 0.00 ATOM 57 CB VAL 8 -96.878 66.390 53.921 1.00 0.00 ATOM 58 CG1 VAL 8 -97.386 67.835 53.780 1.00 0.00 ATOM 59 CG2 VAL 8 -96.195 65.931 52.640 1.00 0.00 ATOM 60 C VAL 8 -94.366 66.061 54.908 1.00 0.00 ATOM 61 O VAL 8 -93.758 66.870 55.600 1.00 0.00 ATOM 62 N GLY 9 -93.660 65.327 54.053 1.00 0.00 ATOM 63 CA GLY 9 -92.235 65.666 53.764 1.00 0.00 ATOM 64 C GLY 9 -90.945 65.303 53.097 1.00 0.00 ATOM 65 O GLY 9 -90.428 64.403 53.716 1.00 0.00 ATOM 66 N SER 10 -90.577 65.571 51.819 1.00 0.00 ATOM 67 CA SER 10 -89.165 65.058 51.302 1.00 0.00 ATOM 68 CB SER 10 -89.328 64.044 50.166 1.00 0.00 ATOM 69 OG SER 10 -90.475 63.239 50.381 1.00 0.00 ATOM 70 C SER 10 -88.316 65.481 50.007 1.00 0.00 ATOM 71 O SER 10 -88.872 65.539 48.934 1.00 0.00 ATOM 72 N SER 11 -87.044 65.925 50.158 1.00 0.00 ATOM 73 CA SER 11 -85.996 66.005 49.148 1.00 0.00 ATOM 74 CB SER 11 -86.154 67.298 49.949 1.00 0.00 ATOM 75 OG SER 11 -85.736 67.108 51.297 1.00 0.00 ATOM 76 C SER 11 -84.746 66.052 48.303 1.00 0.00 ATOM 77 O SER 11 -84.562 67.242 48.193 1.00 0.00 ATOM 78 N TYR 12 -83.718 65.175 48.189 1.00 0.00 ATOM 79 CA TYR 12 -82.577 65.606 47.181 1.00 0.00 ATOM 80 CB TYR 12 -81.952 66.590 48.180 1.00 0.00 ATOM 81 CG TYR 12 -81.248 65.958 49.366 1.00 0.00 ATOM 82 CD1 TYR 12 -81.959 65.247 50.334 1.00 0.00 ATOM 83 CD2 TYR 12 -79.873 66.113 49.541 1.00 0.00 ATOM 84 CE1 TYR 12 -81.317 64.715 51.452 1.00 0.00 ATOM 85 CE2 TYR 12 -79.221 65.584 50.651 1.00 0.00 ATOM 86 CZ TYR 12 -79.947 64.889 51.602 1.00 0.00 ATOM 87 OH TYR 12 -79.301 64.380 52.712 1.00 0.00 ATOM 88 C TYR 12 -81.572 65.011 46.292 1.00 0.00 ATOM 89 O TYR 12 -82.000 63.869 46.160 1.00 0.00 ATOM 90 N VAL 13 -80.406 65.303 45.727 1.00 0.00 ATOM 91 CA VAL 13 -79.477 64.463 45.034 1.00 0.00 ATOM 92 CB VAL 13 -79.113 64.391 43.536 1.00 0.00 ATOM 93 CG1 VAL 13 -78.944 62.939 43.111 1.00 0.00 ATOM 94 CG2 VAL 13 -80.195 65.061 42.709 1.00 0.00 ATOM 95 C VAL 13 -78.099 63.864 44.917 1.00 0.00 ATOM 96 O VAL 13 -77.485 64.475 45.786 1.00 0.00 ATOM 97 N ALA 14 -77.389 63.170 44.033 1.00 0.00 ATOM 98 CA ALA 14 -75.883 63.184 44.046 1.00 0.00 ATOM 99 CB ALA 14 -75.873 62.043 45.050 1.00 0.00 ATOM 100 C ALA 14 -74.713 63.388 42.982 1.00 0.00 ATOM 101 O ALA 14 -75.249 63.426 41.881 1.00 0.00 ATOM 102 N GLU 15 -73.399 63.191 43.023 1.00 0.00 ATOM 103 CA GLU 15 -72.749 62.727 41.666 1.00 0.00 ATOM 104 CB GLU 15 -71.986 64.020 41.368 1.00 0.00 ATOM 105 CG GLU 15 -72.901 65.208 41.087 1.00 0.00 ATOM 106 CD GLU 15 -72.333 66.162 40.054 1.00 0.00 ATOM 107 OE1 GLU 15 -73.030 67.139 39.697 1.00 0.00 ATOM 108 OE2 GLU 15 -71.191 65.936 39.597 1.00 0.00 ATOM 109 C GLU 15 -71.438 62.225 41.070 1.00 0.00 ATOM 110 O GLU 15 -71.255 63.094 40.248 1.00 0.00 ATOM 111 N THR 16 -70.407 61.476 41.534 1.00 0.00 ATOM 112 CA THR 16 -69.177 61.361 40.492 1.00 0.00 ATOM 113 CB THR 16 -68.237 62.227 41.399 1.00 0.00 ATOM 114 OG1 THR 16 -68.680 62.192 42.766 1.00 0.00 ATOM 115 CG2 THR 16 -68.235 63.670 40.921 1.00 0.00 ATOM 116 C THR 16 -68.162 60.592 40.449 1.00 0.00 ATOM 117 O THR 16 -68.279 59.787 41.375 1.00 0.00 ATOM 118 N GLY 17 -67.275 60.455 39.462 1.00 0.00 ATOM 119 CA GLY 17 -66.161 58.892 39.571 1.00 0.00 ATOM 120 C GLY 17 -65.180 59.589 38.162 1.00 0.00 ATOM 121 O GLY 17 -65.725 60.129 37.188 1.00 0.00 ATOM 122 N GLN 18 -63.857 59.395 38.230 1.00 0.00 ATOM 123 CA GLN 18 -62.861 59.554 37.384 1.00 0.00 ATOM 124 CB GLN 18 -62.193 60.694 38.159 1.00 0.00 ATOM 125 CG GLN 18 -61.488 60.236 39.434 1.00 0.00 ATOM 126 CD GLN 18 -60.689 61.342 40.094 1.00 0.00 ATOM 127 OE1 GLN 18 -59.483 61.451 39.893 1.00 0.00 ATOM 128 NE2 GLN 18 -61.353 62.159 40.896 1.00 0.00 ATOM 129 C GLN 18 -61.772 58.888 36.498 1.00 0.00 ATOM 130 O GLN 18 -61.998 57.691 36.362 1.00 0.00 ATOM 131 N ASN 19 -60.697 59.386 35.895 1.00 0.00 ATOM 132 CA ASN 19 -59.681 58.727 35.111 1.00 0.00 ATOM 133 CB ASN 19 -60.051 59.376 33.758 1.00 0.00 ATOM 134 CG ASN 19 -61.550 59.525 33.522 1.00 0.00 ATOM 135 OD1 ASN 19 -62.276 60.434 34.106 1.00 0.00 ATOM 136 ND2 ASN 19 -62.010 58.643 32.626 1.00 0.00 ATOM 137 C ASN 19 -58.267 58.973 34.499 1.00 0.00 ATOM 138 O ASN 19 -57.984 60.068 34.071 1.00 0.00 ATOM 139 N TRP 20 -57.310 58.033 34.696 1.00 0.00 ATOM 140 CA TRP 20 -55.920 58.021 34.069 1.00 0.00 ATOM 141 CB TRP 20 -54.825 58.512 35.047 1.00 0.00 ATOM 142 CG TRP 20 -53.590 59.059 34.355 1.00 0.00 ATOM 143 CD1 TRP 20 -52.400 58.400 34.197 1.00 0.00 ATOM 144 CD2 TRP 20 -53.410 60.337 33.703 1.00 0.00 ATOM 145 NE1 TRP 20 -51.488 59.157 33.485 1.00 0.00 ATOM 146 CE2 TRP 20 -52.080 60.351 33.167 1.00 0.00 ATOM 147 CE3 TRP 20 -54.223 61.470 33.540 1.00 0.00 ATOM 148 CZ2 TRP 20 -51.571 61.469 32.508 1.00 0.00 ATOM 149 CZ3 TRP 20 -53.704 62.579 32.890 1.00 0.00 ATOM 150 CH2 TRP 20 -52.403 62.567 32.378 1.00 0.00 ATOM 151 C TRP 20 -54.847 56.889 33.653 1.00 0.00 ATOM 152 O TRP 20 -54.681 55.868 34.281 1.00 0.00 ATOM 153 N ALA 21 -54.229 57.084 32.462 1.00 0.00 ATOM 154 CA ALA 21 -53.070 56.376 31.873 1.00 0.00 ATOM 155 CB ALA 21 -53.507 55.435 30.766 1.00 0.00 ATOM 156 C ALA 21 -51.487 56.373 31.809 1.00 0.00 ATOM 157 O ALA 21 -50.995 57.417 32.222 1.00 0.00 ATOM 158 N SER 22 -50.690 55.530 31.158 1.00 0.00 ATOM 159 CA SER 22 -49.319 56.123 30.719 1.00 0.00 ATOM 160 CB SER 22 -48.437 55.989 31.936 1.00 0.00 ATOM 161 OG SER 22 -49.204 55.983 33.120 1.00 0.00 ATOM 162 C SER 22 -48.378 55.628 29.618 1.00 0.00 ATOM 163 O SER 22 -48.953 54.815 28.904 1.00 0.00 ATOM 164 N LEU 23 -47.077 55.816 29.415 1.00 0.00 ATOM 165 CA LEU 23 -46.294 55.033 28.471 1.00 0.00 ATOM 166 CB LEU 23 -45.425 56.028 27.716 1.00 0.00 ATOM 167 CG LEU 23 -46.064 57.271 27.107 1.00 0.00 ATOM 168 CD1 LEU 23 -45.097 58.030 26.200 1.00 0.00 ATOM 169 CD2 LEU 23 -47.310 56.855 26.331 1.00 0.00 ATOM 170 C LEU 23 -44.946 54.368 28.383 1.00 0.00 ATOM 171 O LEU 23 -44.371 54.615 29.437 1.00 0.00 ATOM 172 N ALA 24 -44.226 53.848 27.395 1.00 0.00 ATOM 173 CA ALA 24 -42.766 53.579 27.548 1.00 0.00 ATOM 174 CB ALA 24 -43.002 52.207 28.162 1.00 0.00 ATOM 175 C ALA 24 -41.534 53.866 26.633 1.00 0.00 ATOM 176 O ALA 24 -41.904 54.379 25.584 1.00 0.00 ATOM 177 N ALA 25 -40.289 53.407 26.690 1.00 0.00 ATOM 178 CA ALA 25 -39.451 53.463 25.421 1.00 0.00 ATOM 179 CB ALA 25 -39.156 54.953 25.515 1.00 0.00 ATOM 180 C ALA 25 -38.388 52.442 24.888 1.00 0.00 ATOM 181 O ALA 25 -38.343 51.430 25.577 1.00 0.00 ATOM 182 N ASN 26 -37.433 52.612 23.979 1.00 0.00 ATOM 183 CA ASN 26 -36.302 51.637 23.910 1.00 0.00 ATOM 184 CB ASN 26 -36.228 50.233 23.273 1.00 0.00 ATOM 185 CG ASN 26 -36.432 50.243 21.777 1.00 0.00 ATOM 186 OD1 ASN 26 -36.187 51.239 21.103 1.00 0.00 ATOM 187 ND2 ASN 26 -36.871 49.099 21.241 1.00 0.00 ATOM 188 C ASN 26 -34.772 51.796 23.638 1.00 0.00 ATOM 189 O ASN 26 -34.477 52.983 23.561 1.00 0.00 ATOM 190 N GLU 27 -33.847 50.907 23.291 1.00 0.00 ATOM 191 CA GLU 27 -32.551 51.364 22.702 1.00 0.00 ATOM 192 CB GLU 27 -31.594 50.763 23.734 1.00 0.00 ATOM 193 CG GLU 27 -31.825 51.288 25.147 1.00 0.00 ATOM 194 CD GLU 27 -30.543 51.417 25.948 1.00 0.00 ATOM 195 OE1 GLU 27 -30.606 51.901 27.100 1.00 0.00 ATOM 196 OE2 GLU 27 -29.472 51.038 25.425 1.00 0.00 ATOM 197 C GLU 27 -31.598 50.872 21.550 1.00 0.00 ATOM 198 O GLU 27 -32.125 49.915 20.992 1.00 0.00 ATOM 199 N LEU 28 -30.333 51.143 21.248 1.00 0.00 ATOM 200 CA LEU 28 -29.530 50.154 20.435 1.00 0.00 ATOM 201 CB LEU 28 -29.706 49.402 19.088 1.00 0.00 ATOM 202 CG LEU 28 -30.155 50.312 17.967 1.00 0.00 ATOM 203 CD1 LEU 28 -29.089 51.353 17.643 1.00 0.00 ATOM 204 CD2 LEU 28 -30.549 49.530 16.717 1.00 0.00 ATOM 205 C LEU 28 -28.231 49.822 19.790 1.00 0.00 ATOM 206 O LEU 28 -28.221 50.392 18.724 1.00 0.00 ATOM 207 N ARG 29 -27.081 49.363 20.345 1.00 0.00 ATOM 208 CA ARG 29 -25.824 49.155 19.371 1.00 0.00 ATOM 209 CB ARG 29 -25.232 50.562 19.489 1.00 0.00 ATOM 210 CG ARG 29 -24.951 51.292 18.174 1.00 0.00 ATOM 211 CD ARG 29 -23.904 50.595 17.349 1.00 0.00 ATOM 212 NE ARG 29 -22.909 51.518 16.803 1.00 0.00 ATOM 213 CZ ARG 29 -21.824 51.117 16.148 1.00 0.00 ATOM 214 NH1 ARG 29 -21.613 49.822 15.957 1.00 0.00 ATOM 215 NH2 ARG 29 -20.939 52.000 15.706 1.00 0.00 ATOM 216 C ARG 29 -24.504 48.220 19.854 1.00 0.00 ATOM 217 O ARG 29 -24.065 48.169 20.980 1.00 0.00 ATOM 218 N VAL 30 -24.045 47.385 18.888 1.00 0.00 ATOM 219 CA VAL 30 -22.796 46.688 18.711 1.00 0.00 ATOM 220 CB VAL 30 -23.530 45.412 19.199 1.00 0.00 ATOM 221 CG1 VAL 30 -22.574 44.558 20.016 1.00 0.00 ATOM 222 CG2 VAL 30 -24.733 45.775 20.044 1.00 0.00 ATOM 223 C VAL 30 -21.293 46.718 18.236 1.00 0.00 ATOM 224 O VAL 30 -20.797 47.827 18.396 1.00 0.00 ATOM 225 N THR 31 -20.488 45.732 17.855 1.00 0.00 ATOM 226 CA THR 31 -19.120 45.576 17.640 1.00 0.00 ATOM 227 CB THR 31 -19.094 44.336 18.621 1.00 0.00 ATOM 228 OG1 THR 31 -20.379 44.201 19.249 1.00 0.00 ATOM 229 CG2 THR 31 -18.019 44.481 19.716 1.00 0.00 ATOM 230 C THR 31 -18.239 44.703 16.500 1.00 0.00 ATOM 231 O THR 31 -18.575 43.658 15.993 1.00 0.00 ATOM 232 N GLU 32 -17.171 45.394 16.029 1.00 0.00 ATOM 233 CA GLU 32 -16.002 44.968 15.233 1.00 0.00 ATOM 234 CB GLU 32 -16.700 45.132 13.885 1.00 0.00 ATOM 235 CG GLU 32 -18.217 45.137 13.964 1.00 0.00 ATOM 236 CD GLU 32 -18.864 45.006 12.601 1.00 0.00 ATOM 237 OE1 GLU 32 -18.388 45.665 11.654 1.00 0.00 ATOM 238 OE2 GLU 32 -19.851 44.250 12.478 1.00 0.00 ATOM 239 C GLU 32 -14.321 45.220 15.110 1.00 0.00 ATOM 240 O GLU 32 -13.782 46.281 15.328 1.00 0.00 ATOM 241 N ARG 33 -13.590 44.101 14.882 1.00 0.00 ATOM 242 CA ARG 33 -12.281 43.874 14.316 1.00 0.00 ATOM 243 CB ARG 33 -12.071 43.075 15.606 1.00 0.00 ATOM 244 CG ARG 33 -11.191 43.729 16.673 1.00 0.00 ATOM 245 CD ARG 33 -9.774 43.919 16.204 1.00 0.00 ATOM 246 NE ARG 33 -8.789 43.514 17.206 1.00 0.00 ATOM 247 CZ ARG 33 -7.482 43.476 16.969 1.00 0.00 ATOM 248 NH1 ARG 33 -7.019 43.827 15.777 1.00 0.00 ATOM 249 NH2 ARG 33 -6.640 43.065 17.908 1.00 0.00 ATOM 250 C ARG 33 -10.952 43.625 13.678 1.00 0.00 ATOM 251 O ARG 33 -10.468 42.805 14.425 1.00 0.00 ATOM 252 N PRO 34 -10.525 43.737 12.395 1.00 0.00 ATOM 253 CA PRO 34 -9.015 43.167 12.120 1.00 0.00 ATOM 254 CB PRO 34 -9.276 42.282 10.905 1.00 0.00 ATOM 255 CG PRO 34 -9.816 41.017 11.573 1.00 0.00 ATOM 256 CD PRO 34 -10.692 41.534 12.736 1.00 0.00 ATOM 257 C PRO 34 -7.763 43.448 11.453 1.00 0.00 ATOM 258 O PRO 34 -7.084 44.014 12.335 1.00 0.00 ATOM 259 N PHE 35 -6.892 43.932 10.761 1.00 0.00 ATOM 260 CA PHE 35 -5.881 43.907 9.804 1.00 0.00 ATOM 261 CB PHE 35 -5.599 45.181 10.598 1.00 0.00 ATOM 262 CG PHE 35 -4.376 45.908 10.118 1.00 0.00 ATOM 263 CD1 PHE 35 -4.444 46.758 9.034 1.00 0.00 ATOM 264 CD2 PHE 35 -3.159 45.731 10.749 1.00 0.00 ATOM 265 CE1 PHE 35 -3.322 47.422 8.591 1.00 0.00 ATOM 266 CE2 PHE 35 -2.034 46.393 10.313 1.00 0.00 ATOM 267 CZ PHE 35 -2.115 47.241 9.230 1.00 0.00 ATOM 268 C PHE 35 -4.732 43.680 8.809 1.00 0.00 ATOM 269 O PHE 35 -4.825 44.666 8.115 1.00 0.00 ATOM 270 N TRP 36 -3.524 43.120 9.069 1.00 0.00 ATOM 271 CA TRP 36 -2.425 43.438 7.860 1.00 0.00 ATOM 272 CB TRP 36 -1.793 44.775 7.398 1.00 0.00 ATOM 273 CG TRP 36 -1.139 44.699 6.031 1.00 0.00 ATOM 274 CD1 TRP 36 0.206 44.598 5.789 1.00 0.00 ATOM 275 CD2 TRP 36 -1.763 44.684 4.728 1.00 0.00 ATOM 276 NE1 TRP 36 0.477 44.506 4.436 1.00 0.00 ATOM 277 CE2 TRP 36 -0.714 44.555 3.758 1.00 0.00 ATOM 278 CE3 TRP 36 -3.093 44.787 4.283 1.00 0.00 ATOM 279 CZ2 TRP 36 -0.980 44.553 2.391 1.00 0.00 ATOM 280 CZ3 TRP 36 -3.344 44.793 2.920 1.00 0.00 ATOM 281 CH2 TRP 36 -2.301 44.668 1.995 1.00 0.00 ATOM 282 C TRP 36 -1.330 42.542 7.303 1.00 0.00 ATOM 283 O TRP 36 -1.040 41.883 8.296 1.00 0.00 ATOM 284 N ILE 37 -0.484 42.518 6.278 1.00 0.00 ATOM 285 CA ILE 37 0.854 41.758 6.366 1.00 0.00 ATOM 286 CB ILE 37 1.060 40.262 6.084 1.00 0.00 ATOM 287 CG1 ILE 37 0.120 39.447 6.952 1.00 0.00 ATOM 288 CG2 ILE 37 2.510 39.864 6.350 1.00 0.00 ATOM 289 CD1 ILE 37 0.094 37.968 6.601 1.00 0.00 ATOM 290 C ILE 37 1.976 41.816 5.151 1.00 0.00 ATOM 291 O ILE 37 1.646 41.782 3.988 1.00 0.00 ATOM 292 N SER 38 3.268 42.031 5.503 1.00 0.00 ATOM 293 CA SER 38 4.501 41.742 4.797 1.00 0.00 ATOM 294 CB SER 38 5.395 42.954 5.067 1.00 0.00 ATOM 295 OG SER 38 4.632 44.025 5.598 1.00 0.00 ATOM 296 C SER 38 6.015 41.472 4.661 1.00 0.00 ATOM 297 O SER 38 6.703 42.044 5.477 1.00 0.00 ATOM 298 N SER 39 6.529 40.485 3.886 1.00 0.00 ATOM 299 CA SER 39 7.979 40.347 3.545 1.00 0.00 ATOM 300 CB SER 39 8.342 38.909 3.923 1.00 0.00 ATOM 301 OG SER 39 7.469 38.426 4.931 1.00 0.00 ATOM 302 C SER 39 8.984 39.640 2.557 1.00 0.00 ATOM 303 O SER 39 8.711 38.515 2.205 1.00 0.00 ATOM 304 N PHE 40 9.966 40.344 1.938 1.00 0.00 ATOM 305 CA PHE 40 11.112 39.757 1.198 1.00 0.00 ATOM 306 CB PHE 40 10.388 38.622 0.521 1.00 0.00 ATOM 307 CG PHE 40 11.313 37.459 0.217 1.00 0.00 ATOM 308 CD1 PHE 40 11.752 36.621 1.228 1.00 0.00 ATOM 309 CD2 PHE 40 11.723 37.236 -1.084 1.00 0.00 ATOM 310 CE1 PHE 40 12.590 35.543 0.941 1.00 0.00 ATOM 311 CE2 PHE 40 12.556 36.177 -1.376 1.00 0.00 ATOM 312 CZ PHE 40 12.999 35.349 -0.361 1.00 0.00 ATOM 313 C PHE 40 12.445 39.544 0.595 1.00 0.00 ATOM 314 O PHE 40 12.393 40.163 -0.442 1.00 0.00 ATOM 315 N ILE 41 13.637 39.200 1.144 1.00 0.00 ATOM 316 CA ILE 41 14.895 39.178 0.129 1.00 0.00 ATOM 317 CB ILE 41 15.964 40.109 0.679 1.00 0.00 ATOM 318 CG1 ILE 41 15.595 41.556 0.542 1.00 0.00 ATOM 319 CG2 ILE 41 17.270 39.837 -0.042 1.00 0.00 ATOM 320 CD1 ILE 41 16.356 42.460 1.544 1.00 0.00 ATOM 321 C ILE 41 16.346 38.510 0.559 1.00 0.00 ATOM 322 O ILE 41 16.843 38.662 1.651 1.00 0.00 ATOM 323 N GLY 42 16.875 37.636 -0.332 1.00 0.00 ATOM 324 CA GLY 42 18.214 37.146 -0.495 1.00 0.00 ATOM 325 C GLY 42 19.690 37.267 -1.044 1.00 0.00 ATOM 326 O GLY 42 20.039 38.441 -1.017 1.00 0.00 ATOM 327 N ARG 43 20.603 36.357 -1.369 1.00 0.00 ATOM 328 CA ARG 43 21.931 36.376 -1.726 1.00 0.00 ATOM 329 CB ARG 43 23.133 35.798 -0.995 1.00 0.00 ATOM 330 CG ARG 43 22.885 35.305 0.391 1.00 0.00 ATOM 331 CD ARG 43 24.179 35.008 1.125 1.00 0.00 ATOM 332 NE ARG 43 23.945 34.506 2.474 1.00 0.00 ATOM 333 CZ ARG 43 24.911 34.166 3.319 1.00 0.00 ATOM 334 NH1 ARG 43 26.180 34.277 2.952 1.00 0.00 ATOM 335 NH2 ARG 43 24.607 33.722 4.530 1.00 0.00 ATOM 336 C ARG 43 22.969 35.510 -2.723 1.00 0.00 ATOM 337 O ARG 43 22.773 34.370 -3.078 1.00 0.00 ATOM 338 N SER 44 23.910 36.276 -3.329 1.00 0.00 ATOM 339 CA SER 44 25.126 35.870 -4.087 1.00 0.00 ATOM 340 CB SER 44 25.178 36.650 -5.402 1.00 0.00 ATOM 341 OG SER 44 23.907 37.200 -5.704 1.00 0.00 ATOM 342 C SER 44 26.656 35.560 -4.219 1.00 0.00 ATOM 343 O SER 44 27.175 36.190 -3.305 1.00 0.00 ATOM 344 N LYS 45 27.454 35.075 -5.164 1.00 0.00 ATOM 345 CA LYS 45 28.994 35.270 -5.106 1.00 0.00 ATOM 346 CB LYS 45 29.389 34.498 -3.847 1.00 0.00 ATOM 347 CG LYS 45 28.200 34.056 -3.004 1.00 0.00 ATOM 348 CD LYS 45 27.711 35.147 -2.063 1.00 0.00 ATOM 349 CE LYS 45 27.848 34.699 -0.607 1.00 0.00 ATOM 350 NZ LYS 45 27.357 35.699 0.379 1.00 0.00 ATOM 351 C LYS 45 30.052 35.686 -6.267 1.00 0.00 ATOM 352 O LYS 45 29.484 35.805 -7.347 1.00 0.00 TER END