####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS312_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS312_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 34 - 42 4.89 77.88 LCS_AVERAGE: 17.82 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 1.13 93.72 LONGEST_CONTINUOUS_SEGMENT: 5 28 - 32 1.94 52.32 LONGEST_CONTINUOUS_SEGMENT: 5 29 - 33 1.82 54.96 LONGEST_CONTINUOUS_SEGMENT: 5 33 - 37 1.83 73.82 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 1.70 74.82 LONGEST_CONTINUOUS_SEGMENT: 5 41 - 45 1.70 89.68 LCS_AVERAGE: 9.71 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.95 94.26 LONGEST_CONTINUOUS_SEGMENT: 4 3 - 6 0.90 94.01 LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.83 92.30 LCS_AVERAGE: 4.03 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 7 0 2 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT V 3 V 3 4 5 7 2 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT Q 4 Q 4 4 5 7 2 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 8 8 LCS_GDT G 5 G 5 4 5 7 2 3 5 5 5 5 5 5 6 6 6 6 6 6 7 7 7 7 9 9 LCS_GDT P 6 P 6 4 5 7 0 3 5 5 5 5 5 5 6 6 6 6 7 7 8 8 8 9 9 9 LCS_GDT W 7 W 7 0 4 7 0 0 2 4 4 4 5 5 6 6 6 6 7 7 8 8 8 9 9 9 LCS_GDT V 8 V 8 0 4 7 0 0 3 4 4 4 5 5 5 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT G 9 G 9 0 4 7 0 0 3 4 4 4 5 5 5 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT S 10 S 10 0 3 7 0 0 3 3 3 3 5 5 5 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT S 11 S 11 0 3 7 0 1 3 3 3 3 3 4 4 5 6 6 7 7 8 8 8 9 9 9 LCS_GDT Y 12 Y 12 0 3 7 0 0 3 3 3 3 3 4 4 5 5 6 7 7 8 8 8 9 9 9 LCS_GDT V 13 V 13 0 3 7 0 0 3 3 3 3 3 4 4 5 5 6 6 7 8 8 8 9 9 9 LCS_GDT A 14 A 14 0 3 8 0 0 3 3 3 3 4 4 5 5 5 6 7 7 7 7 9 9 9 9 LCS_GDT E 15 E 15 0 4 8 0 0 3 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT T 16 T 16 3 4 8 0 0 3 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT G 17 G 17 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT Q 18 Q 18 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT N 19 N 19 3 4 8 0 3 4 4 4 5 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT W 20 W 20 3 4 8 0 0 4 4 4 4 5 6 6 6 6 6 7 7 8 8 9 9 9 9 LCS_GDT A 21 A 21 3 4 8 0 2 3 4 4 4 5 5 6 6 6 6 6 7 8 8 9 9 9 9 LCS_GDT S 22 S 22 0 4 8 0 0 3 4 4 4 4 4 6 6 6 6 6 7 8 8 9 9 9 9 LCS_GDT L 23 L 23 0 3 7 0 0 3 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT A 24 A 24 0 3 7 0 2 3 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT A 25 A 25 0 3 7 0 2 2 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT N 26 N 26 0 3 7 0 0 2 3 3 3 3 4 4 5 6 6 6 7 7 8 8 8 8 9 LCS_GDT E 27 E 27 0 4 8 0 0 3 3 4 4 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT L 28 L 28 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT R 29 R 29 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT V 30 V 30 0 5 8 0 0 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT T 31 T 31 3 5 8 0 2 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT E 32 E 32 3 5 8 0 2 3 4 5 5 6 6 6 7 7 7 8 8 8 8 8 8 9 9 LCS_GDT R 33 R 33 3 5 8 0 2 3 4 5 5 6 6 6 7 7 7 8 8 8 9 10 10 10 10 LCS_GDT P 34 P 34 3 5 9 2 3 4 4 5 5 6 6 6 7 7 8 9 9 9 9 10 10 10 10 LCS_GDT F 35 F 35 3 5 9 0 3 4 4 5 5 6 6 6 6 6 8 9 9 9 9 10 10 10 10 LCS_GDT W 36 W 36 3 5 9 2 3 4 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT I 37 I 37 0 5 9 0 1 4 4 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT S 38 S 38 0 5 9 0 0 2 3 5 5 6 6 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT S 39 S 39 0 4 9 0 0 2 3 4 4 4 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT F 40 F 40 3 4 9 0 3 3 3 4 4 4 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT I 41 I 41 3 5 9 0 3 3 4 4 5 5 5 6 6 7 8 9 9 9 9 10 10 10 10 LCS_GDT G 42 G 42 4 5 9 0 4 4 4 4 5 5 5 6 6 7 7 9 9 9 9 10 10 10 10 LCS_GDT R 43 R 43 4 5 8 0 4 4 4 4 5 5 5 5 6 7 7 8 8 8 9 9 9 10 10 LCS_GDT S 44 S 44 4 5 8 0 4 4 4 4 5 5 5 5 6 7 7 8 8 8 9 9 9 9 10 LCS_GDT K 45 K 45 4 5 8 0 4 4 4 4 5 5 5 5 5 6 7 8 8 8 8 8 8 9 10 LCS_AVERAGE LCS_A: 10.52 ( 4.03 9.71 17.82 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 2 4 5 5 5 5 6 6 6 7 7 8 9 9 9 9 10 10 10 10 GDT PERCENT_AT 4.55 9.09 11.36 11.36 11.36 11.36 13.64 13.64 13.64 15.91 15.91 18.18 20.45 20.45 20.45 20.45 22.73 22.73 22.73 22.73 GDT RMS_LOCAL 22.36 0.83 1.13 1.13 1.13 1.13 2.23 2.23 2.23 2.98 2.98 4.60 4.89 4.89 4.89 4.89 5.55 5.55 5.55 5.55 GDT RMS_ALL_AT 92.61 92.30 93.72 93.72 93.72 93.72 74.03 74.03 74.03 54.71 54.71 77.46 77.88 77.88 77.88 77.88 77.12 77.12 77.12 77.12 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 141.043 0 0.339 0.695 143.455 0.000 0.000 - LGA V 3 V 3 136.163 0 0.255 0.250 137.569 0.000 0.000 133.677 LGA Q 4 Q 4 135.004 0 0.290 1.328 139.079 0.000 0.000 139.079 LGA G 5 G 5 131.437 0 0.222 0.222 132.549 0.000 0.000 - LGA P 6 P 6 128.521 0 0.430 0.491 131.813 0.000 0.000 130.865 LGA W 7 W 7 124.167 0 0.401 1.301 129.824 0.000 0.000 124.840 LGA V 8 V 8 116.926 0 0.584 1.513 119.512 0.000 0.000 116.138 LGA G 9 G 9 111.930 0 0.436 0.436 113.746 0.000 0.000 - LGA S 10 S 10 110.660 0 0.581 0.605 112.720 0.000 0.000 112.720 LGA S 11 S 11 107.437 0 0.408 0.899 109.023 0.000 0.000 109.023 LGA Y 12 Y 12 99.960 0 0.479 1.412 102.527 0.000 0.000 95.337 LGA V 13 V 13 96.557 0 0.588 1.474 99.045 0.000 0.000 99.045 LGA A 14 A 14 95.703 0 0.486 0.653 96.985 0.000 0.000 - LGA E 15 E 15 90.318 0 0.426 1.142 92.142 0.000 0.000 88.007 LGA T 16 T 16 83.027 0 0.578 0.630 85.731 0.000 0.000 82.472 LGA G 17 G 17 79.786 0 0.715 0.715 81.489 0.000 0.000 - LGA Q 18 Q 18 73.558 0 0.300 1.078 75.512 0.000 0.000 70.502 LGA N 19 N 19 69.976 0 0.498 0.671 74.041 0.000 0.000 74.041 LGA W 20 W 20 62.578 0 0.323 1.177 65.168 0.000 0.000 60.002 LGA A 21 A 21 58.383 0 0.555 0.603 59.778 0.000 0.000 - LGA S 22 S 22 51.106 0 0.569 0.690 53.468 0.000 0.000 50.634 LGA L 23 L 23 49.073 0 0.569 1.144 49.838 0.000 0.000 49.163 LGA A 24 A 24 48.303 0 0.467 0.741 48.638 0.000 0.000 - LGA A 25 A 25 42.314 0 0.435 0.529 44.408 0.000 0.000 - LGA N 26 N 26 37.577 0 0.471 1.288 39.138 0.000 0.000 34.089 LGA E 27 E 27 37.560 0 0.514 0.822 38.974 0.000 0.000 37.986 LGA L 28 L 28 34.527 0 0.514 1.127 35.435 0.000 0.000 35.263 LGA R 29 R 29 27.943 0 0.563 1.624 30.722 0.000 0.000 30.722 LGA V 30 V 30 22.188 0 0.472 1.458 24.338 0.000 0.000 23.366 LGA T 31 T 31 14.808 0 0.556 0.682 17.453 0.000 0.000 16.448 LGA E 32 E 32 9.972 0 0.365 1.484 12.667 0.000 0.000 10.531 LGA R 33 R 33 3.392 0 0.470 1.269 8.955 26.818 16.198 8.955 LGA P 34 P 34 1.696 0 0.440 0.968 5.209 66.364 40.779 5.209 LGA F 35 F 35 0.913 0 0.434 1.551 9.579 75.455 29.091 9.579 LGA W 36 W 36 0.752 0 0.285 1.301 6.435 77.727 37.792 4.515 LGA I 37 I 37 2.261 0 0.572 1.384 4.397 36.364 25.000 4.397 LGA S 38 S 38 2.970 0 0.494 0.792 5.842 18.182 15.152 5.842 LGA S 39 S 39 9.394 0 0.554 0.643 11.490 0.000 0.000 10.383 LGA F 40 F 40 12.313 0 0.477 1.039 17.629 0.000 0.000 17.629 LGA I 41 I 41 12.493 0 0.187 0.701 14.065 0.000 0.000 11.249 LGA G 42 G 42 15.707 0 0.559 0.559 18.912 0.000 0.000 - LGA R 43 R 43 22.387 0 0.289 1.110 25.909 0.000 0.000 25.909 LGA S 44 S 44 26.994 0 0.357 0.382 30.401 0.000 0.000 25.990 LGA K 45 K 45 33.460 0 0.249 1.145 35.330 0.000 0.000 32.327 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 45.189 45.148 44.611 6.839 3.728 0.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 6 2.23 13.636 12.924 0.258 LGA_LOCAL RMSD: 2.226 Number of atoms: 6 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 74.032 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 45.189 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.529113 * X + 0.572202 * Y + -0.626598 * Z + 78.218346 Y_new = 0.848283 * X + 0.338109 * Y + -0.407552 * Z + 21.869022 Z_new = -0.021344 * X + -0.747173 * Y + -0.664287 * Z + -28.101030 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.128494 0.021346 -2.297538 [DEG: 121.9537 1.2230 -131.6392 ] ZXZ: -0.994125 2.297335 -3.113034 [DEG: -56.9592 131.6276 -178.3637 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS312_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS312_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 6 2.23 12.924 45.19 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS312_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 1SMP_A ATOM 9 N ALA 2 -118.049 69.562 64.845 1.00 0.00 ATOM 10 CA ALA 2 -116.897 69.233 64.066 1.00 0.00 ATOM 11 CB ALA 2 -115.929 70.174 64.757 1.00 0.00 ATOM 12 C ALA 2 -115.398 68.895 63.925 1.00 0.00 ATOM 13 O ALA 2 -114.738 68.767 64.930 1.00 0.00 ATOM 14 N VAL 3 -115.020 68.304 62.764 1.00 0.00 ATOM 15 CA VAL 3 -113.621 68.009 62.422 1.00 0.00 ATOM 16 CB VAL 3 -113.589 66.732 63.301 1.00 0.00 ATOM 17 CG1 VAL 3 -112.162 66.462 63.752 1.00 0.00 ATOM 18 CG2 VAL 3 -114.482 66.892 64.512 1.00 0.00 ATOM 19 C VAL 3 -112.811 67.594 61.090 1.00 0.00 ATOM 20 O VAL 3 -113.302 67.237 60.043 1.00 0.00 ATOM 21 N GLN 4 -111.521 68.009 61.149 1.00 0.00 ATOM 22 CA GLN 4 -110.428 67.696 60.253 1.00 0.00 ATOM 23 CB GLN 4 -110.113 68.832 61.241 1.00 0.00 ATOM 24 CG GLN 4 -108.863 69.632 60.943 1.00 0.00 ATOM 25 CD GLN 4 -109.004 70.469 59.701 1.00 0.00 ATOM 26 OE1 GLN 4 -110.051 71.073 59.464 1.00 0.00 ATOM 27 NE2 GLN 4 -107.950 70.512 58.892 1.00 0.00 ATOM 28 C GLN 4 -109.273 66.818 59.826 1.00 0.00 ATOM 29 O GLN 4 -109.011 66.069 60.761 1.00 0.00 ATOM 30 N GLY 5 -108.419 66.856 58.808 1.00 0.00 ATOM 31 CA GLY 5 -107.066 66.233 58.961 1.00 0.00 ATOM 32 C GLY 5 -105.676 66.439 58.505 1.00 0.00 ATOM 33 O GLY 5 -105.663 67.539 57.963 1.00 0.00 ATOM 34 N PRO 6 -104.595 65.676 58.378 1.00 0.00 ATOM 35 CA PRO 6 -103.584 65.974 57.354 1.00 0.00 ATOM 36 CB PRO 6 -102.639 66.301 58.508 1.00 0.00 ATOM 37 CG PRO 6 -102.797 65.135 59.463 1.00 0.00 ATOM 38 CD PRO 6 -104.126 64.452 59.169 1.00 0.00 ATOM 39 C PRO 6 -102.540 65.534 56.509 1.00 0.00 ATOM 40 O PRO 6 -103.101 65.061 55.499 1.00 0.00 ATOM 41 N TRP 7 -101.651 64.817 56.098 1.00 0.00 ATOM 42 CA TRP 7 -100.401 64.777 55.562 1.00 0.00 ATOM 43 CB TRP 7 -100.963 63.473 55.015 1.00 0.00 ATOM 44 CG TRP 7 -101.945 63.655 53.907 1.00 0.00 ATOM 45 CD1 TRP 7 -103.300 63.843 54.012 1.00 0.00 ATOM 46 CD2 TRP 7 -101.647 63.682 52.530 1.00 0.00 ATOM 47 NE1 TRP 7 -103.862 64.007 52.767 1.00 0.00 ATOM 48 CE2 TRP 7 -102.868 63.901 51.833 1.00 0.00 ATOM 49 CE3 TRP 7 -100.474 63.538 51.806 1.00 0.00 ATOM 50 CZ2 TRP 7 -102.947 63.958 50.464 1.00 0.00 ATOM 51 CZ3 TRP 7 -100.541 63.621 50.436 1.00 0.00 ATOM 52 CH2 TRP 7 -101.783 63.828 49.771 1.00 0.00 ATOM 53 C TRP 7 -99.422 64.037 54.620 1.00 0.00 ATOM 54 O TRP 7 -99.853 63.154 53.915 1.00 0.00 ATOM 55 N VAL 8 -98.294 64.710 54.284 1.00 0.00 ATOM 56 CA VAL 8 -97.105 64.058 53.743 1.00 0.00 ATOM 57 CB VAL 8 -97.720 64.889 52.597 1.00 0.00 ATOM 58 CG1 VAL 8 -99.237 64.820 52.669 1.00 0.00 ATOM 59 CG2 VAL 8 -97.241 66.332 52.680 1.00 0.00 ATOM 60 C VAL 8 -95.696 63.768 53.377 1.00 0.00 ATOM 61 O VAL 8 -95.391 64.942 53.553 1.00 0.00 ATOM 62 N GLY 9 -94.784 62.968 52.833 1.00 0.00 ATOM 63 CA GLY 9 -93.639 63.345 52.147 1.00 0.00 ATOM 64 C GLY 9 -92.191 63.149 51.645 1.00 0.00 ATOM 65 O GLY 9 -91.557 62.453 52.405 1.00 0.00 ATOM 66 N SER 10 -91.887 63.193 50.323 1.00 0.00 ATOM 67 CA SER 10 -90.420 62.777 49.883 1.00 0.00 ATOM 68 CB SER 10 -90.311 61.452 49.126 1.00 0.00 ATOM 69 OG SER 10 -91.261 60.520 49.617 1.00 0.00 ATOM 70 C SER 10 -89.713 62.990 48.401 1.00 0.00 ATOM 71 O SER 10 -90.293 62.892 47.345 1.00 0.00 ATOM 72 N SER 11 -88.462 63.511 48.464 1.00 0.00 ATOM 73 CA SER 11 -87.406 63.604 47.425 1.00 0.00 ATOM 74 CB SER 11 -86.824 65.020 47.441 1.00 0.00 ATOM 75 OG SER 11 -87.690 65.905 48.131 1.00 0.00 ATOM 76 C SER 11 -86.270 62.991 46.594 1.00 0.00 ATOM 77 O SER 11 -86.537 61.818 46.357 1.00 0.00 ATOM 78 N TYR 12 -85.213 63.518 45.984 1.00 0.00 ATOM 79 CA TYR 12 -84.092 62.971 45.373 1.00 0.00 ATOM 80 CB TYR 12 -84.453 63.436 43.943 1.00 0.00 ATOM 81 CG TYR 12 -85.092 62.423 43.015 1.00 0.00 ATOM 82 CD1 TYR 12 -84.303 61.521 42.269 1.00 0.00 ATOM 83 CD2 TYR 12 -86.492 62.393 42.837 1.00 0.00 ATOM 84 CE1 TYR 12 -84.903 60.600 41.358 1.00 0.00 ATOM 85 CE2 TYR 12 -87.101 61.483 41.936 1.00 0.00 ATOM 86 CZ TYR 12 -86.300 60.590 41.208 1.00 0.00 ATOM 87 OH TYR 12 -86.905 59.656 40.402 1.00 0.00 ATOM 88 C TYR 12 -83.069 62.816 44.241 1.00 0.00 ATOM 89 O TYR 12 -83.288 63.391 43.199 1.00 0.00 ATOM 90 N VAL 13 -81.798 62.571 44.649 1.00 0.00 ATOM 91 CA VAL 13 -80.703 62.182 43.667 1.00 0.00 ATOM 92 CB VAL 13 -80.472 63.708 43.670 1.00 0.00 ATOM 93 CG1 VAL 13 -81.809 64.431 43.650 1.00 0.00 ATOM 94 CG2 VAL 13 -79.657 64.112 44.890 1.00 0.00 ATOM 95 C VAL 13 -79.503 61.465 43.247 1.00 0.00 ATOM 96 O VAL 13 -78.947 61.737 44.306 1.00 0.00 ATOM 97 N ALA 14 -78.756 60.958 42.271 1.00 0.00 ATOM 98 CA ALA 14 -77.318 61.002 42.232 1.00 0.00 ATOM 99 CB ALA 14 -77.677 59.580 42.635 1.00 0.00 ATOM 100 C ALA 14 -76.368 60.425 41.030 1.00 0.00 ATOM 101 O ALA 14 -76.796 59.876 40.040 1.00 0.00 ATOM 102 N GLU 15 -75.116 60.947 41.051 1.00 0.00 ATOM 103 CA GLU 15 -73.952 60.479 40.360 1.00 0.00 ATOM 104 CB GLU 15 -73.270 59.281 41.020 1.00 0.00 ATOM 105 CG GLU 15 -72.286 59.648 42.117 1.00 0.00 ATOM 106 CD GLU 15 -71.427 58.473 42.537 1.00 0.00 ATOM 107 OE1 GLU 15 -71.977 57.360 42.678 1.00 0.00 ATOM 108 OE2 GLU 15 -70.209 58.662 42.731 1.00 0.00 ATOM 109 C GLU 15 -72.732 59.935 39.556 1.00 0.00 ATOM 110 O GLU 15 -72.711 60.540 38.508 1.00 0.00 ATOM 111 N THR 16 -71.582 59.521 40.145 1.00 0.00 ATOM 112 CA THR 16 -70.382 59.283 39.129 1.00 0.00 ATOM 113 CB THR 16 -69.532 60.555 39.475 1.00 0.00 ATOM 114 OG1 THR 16 -69.794 60.988 40.820 1.00 0.00 ATOM 115 CG2 THR 16 -69.876 61.686 38.521 1.00 0.00 ATOM 116 C THR 16 -68.935 58.951 39.379 1.00 0.00 ATOM 117 O THR 16 -68.335 59.010 40.426 1.00 0.00 ATOM 118 N GLY 17 -68.495 58.164 38.366 1.00 0.00 ATOM 119 CA GLY 17 -67.038 57.105 38.593 1.00 0.00 ATOM 120 C GLY 17 -65.769 57.954 37.481 1.00 0.00 ATOM 121 O GLY 17 -65.793 59.106 37.063 1.00 0.00 ATOM 122 N GLN 18 -64.683 57.230 37.230 1.00 0.00 ATOM 123 CA GLN 18 -63.908 57.651 36.114 1.00 0.00 ATOM 124 CB GLN 18 -64.525 59.010 35.876 1.00 0.00 ATOM 125 CG GLN 18 -64.137 60.027 36.929 1.00 0.00 ATOM 126 CD GLN 18 -62.842 60.743 36.610 1.00 0.00 ATOM 127 OE1 GLN 18 -61.772 60.139 36.440 1.00 0.00 ATOM 128 NE2 GLN 18 -62.906 62.075 36.532 1.00 0.00 ATOM 129 C GLN 18 -62.748 57.017 35.378 1.00 0.00 ATOM 130 O GLN 18 -62.949 55.810 35.316 1.00 0.00 ATOM 131 N ASN 19 -61.696 57.503 34.726 1.00 0.00 ATOM 132 CA ASN 19 -60.582 56.937 34.047 1.00 0.00 ATOM 133 CB ASN 19 -60.777 57.919 32.869 1.00 0.00 ATOM 134 CG ASN 19 -62.231 58.302 32.606 1.00 0.00 ATOM 135 OD1 ASN 19 -62.894 59.136 33.354 1.00 0.00 ATOM 136 ND2 ASN 19 -62.717 57.712 31.508 1.00 0.00 ATOM 137 C ASN 19 -59.104 57.305 33.627 1.00 0.00 ATOM 138 O ASN 19 -58.650 58.425 33.654 1.00 0.00 ATOM 139 N TRP 20 -58.288 56.224 33.551 1.00 0.00 ATOM 140 CA TRP 20 -56.988 56.079 32.872 1.00 0.00 ATOM 141 CB TRP 20 -56.060 55.795 34.078 1.00 0.00 ATOM 142 CG TRP 20 -54.657 56.348 33.910 1.00 0.00 ATOM 143 CD1 TRP 20 -53.545 55.625 33.569 1.00 0.00 ATOM 144 CD2 TRP 20 -54.201 57.714 34.037 1.00 0.00 ATOM 145 NE1 TRP 20 -52.425 56.431 33.457 1.00 0.00 ATOM 146 CE2 TRP 20 -52.798 57.719 33.736 1.00 0.00 ATOM 147 CE3 TRP 20 -54.828 58.921 34.391 1.00 0.00 ATOM 148 CZ2 TRP 20 -52.042 58.887 33.810 1.00 0.00 ATOM 149 CZ3 TRP 20 -54.062 60.074 34.470 1.00 0.00 ATOM 150 CH2 TRP 20 -52.695 60.051 34.175 1.00 0.00 ATOM 151 C TRP 20 -55.918 55.968 31.859 1.00 0.00 ATOM 152 O TRP 20 -56.499 55.267 31.038 1.00 0.00 ATOM 153 N ALA 21 -54.604 56.117 31.723 1.00 0.00 ATOM 154 CA ALA 21 -53.830 55.198 30.846 1.00 0.00 ATOM 155 CB ALA 21 -54.338 56.029 29.678 1.00 0.00 ATOM 156 C ALA 21 -52.497 54.588 30.647 1.00 0.00 ATOM 157 O ALA 21 -51.942 54.878 31.701 1.00 0.00 ATOM 158 N SER 22 -51.746 54.086 29.672 1.00 0.00 ATOM 159 CA SER 22 -50.280 54.154 29.718 1.00 0.00 ATOM 160 CB SER 22 -50.117 52.710 30.125 1.00 0.00 ATOM 161 OG SER 22 -51.303 52.211 30.704 1.00 0.00 ATOM 162 C SER 22 -49.059 54.331 28.883 1.00 0.00 ATOM 163 O SER 22 -49.576 54.247 27.774 1.00 0.00 ATOM 164 N LEU 23 -47.736 54.225 28.956 1.00 0.00 ATOM 165 CA LEU 23 -46.962 53.714 27.779 1.00 0.00 ATOM 166 CB LEU 23 -46.795 53.626 26.238 1.00 0.00 ATOM 167 CG LEU 23 -47.127 54.926 25.540 1.00 0.00 ATOM 168 CD1 LEU 23 -46.144 56.026 25.931 1.00 0.00 ATOM 169 CD2 LEU 23 -47.187 54.764 24.025 1.00 0.00 ATOM 170 C LEU 23 -45.371 53.778 27.699 1.00 0.00 ATOM 171 O LEU 23 -44.734 54.660 28.228 1.00 0.00 ATOM 172 N ALA 24 -44.762 52.655 27.243 1.00 0.00 ATOM 173 CA ALA 24 -43.472 52.499 26.659 1.00 0.00 ATOM 174 CB ALA 24 -42.942 51.476 27.645 1.00 0.00 ATOM 175 C ALA 24 -42.373 51.655 25.984 1.00 0.00 ATOM 176 O ALA 24 -42.490 50.451 26.026 1.00 0.00 ATOM 177 N ALA 25 -41.531 52.242 25.096 1.00 0.00 ATOM 178 CA ALA 25 -40.196 51.742 24.758 1.00 0.00 ATOM 179 CB ALA 25 -40.495 50.271 24.926 1.00 0.00 ATOM 180 C ALA 25 -39.129 51.574 23.671 1.00 0.00 ATOM 181 O ALA 25 -39.379 51.961 22.554 1.00 0.00 ATOM 182 N ASN 26 -37.849 51.497 24.112 1.00 0.00 ATOM 183 CA ASN 26 -36.729 51.123 23.230 1.00 0.00 ATOM 184 CB ASN 26 -36.867 52.462 22.484 1.00 0.00 ATOM 185 CG ASN 26 -36.210 52.347 21.122 1.00 0.00 ATOM 186 OD1 ASN 26 -35.156 52.970 20.863 1.00 0.00 ATOM 187 ND2 ASN 26 -36.760 51.478 20.286 1.00 0.00 ATOM 188 C ASN 26 -35.123 51.029 23.273 1.00 0.00 ATOM 189 O ASN 26 -34.454 51.406 24.208 1.00 0.00 ATOM 190 N GLU 27 -34.637 50.119 22.391 1.00 0.00 ATOM 191 CA GLU 27 -33.272 49.932 21.985 1.00 0.00 ATOM 192 CB GLU 27 -33.020 49.039 23.200 1.00 0.00 ATOM 193 CG GLU 27 -33.967 49.283 24.362 1.00 0.00 ATOM 194 CD GLU 27 -33.507 48.599 25.632 1.00 0.00 ATOM 195 OE1 GLU 27 -33.069 47.433 25.551 1.00 0.00 ATOM 196 OE2 GLU 27 -33.589 49.224 26.710 1.00 0.00 ATOM 197 C GLU 27 -32.291 49.273 20.832 1.00 0.00 ATOM 198 O GLU 27 -32.686 48.509 19.981 1.00 0.00 ATOM 199 N LEU 28 -31.098 49.904 20.704 1.00 0.00 ATOM 200 CA LEU 28 -29.891 49.429 20.094 1.00 0.00 ATOM 201 CB LEU 28 -29.899 49.107 21.590 1.00 0.00 ATOM 202 CG LEU 28 -28.521 49.048 22.257 1.00 0.00 ATOM 203 CD1 LEU 28 -28.686 48.928 23.762 1.00 0.00 ATOM 204 CD2 LEU 28 -27.724 47.880 21.696 1.00 0.00 ATOM 205 C LEU 28 -28.690 48.859 19.339 1.00 0.00 ATOM 206 O LEU 28 -28.744 49.295 18.212 1.00 0.00 ATOM 207 N ARG 29 -27.497 48.629 19.941 1.00 0.00 ATOM 208 CA ARG 29 -26.269 48.358 18.906 1.00 0.00 ATOM 209 CB ARG 29 -25.970 49.711 18.252 1.00 0.00 ATOM 210 CG ARG 29 -26.037 49.755 16.723 1.00 0.00 ATOM 211 CD ARG 29 -24.997 48.876 16.084 1.00 0.00 ATOM 212 NE ARG 29 -24.302 49.536 14.979 1.00 0.00 ATOM 213 CZ ARG 29 -23.263 49.001 14.347 1.00 0.00 ATOM 214 NH1 ARG 29 -22.819 47.806 14.709 1.00 0.00 ATOM 215 NH2 ARG 29 -22.653 49.664 13.374 1.00 0.00 ATOM 216 C ARG 29 -25.184 47.269 18.847 1.00 0.00 ATOM 217 O ARG 29 -25.061 46.971 20.029 1.00 0.00 ATOM 218 N VAL 30 -24.227 46.880 18.010 1.00 0.00 ATOM 219 CA VAL 30 -22.893 46.365 18.636 1.00 0.00 ATOM 220 CB VAL 30 -23.578 45.090 19.148 1.00 0.00 ATOM 221 CG1 VAL 30 -24.796 44.754 18.270 1.00 0.00 ATOM 222 CG2 VAL 30 -22.587 43.934 19.160 1.00 0.00 ATOM 223 C VAL 30 -21.451 46.378 18.099 1.00 0.00 ATOM 224 O VAL 30 -21.097 47.550 18.038 1.00 0.00 ATOM 225 N THR 31 -20.529 45.444 17.892 1.00 0.00 ATOM 226 CA THR 31 -19.239 45.363 17.486 1.00 0.00 ATOM 227 CB THR 31 -19.290 44.065 18.388 1.00 0.00 ATOM 228 OG1 THR 31 -20.612 43.911 18.925 1.00 0.00 ATOM 229 CG2 THR 31 -18.283 44.124 19.552 1.00 0.00 ATOM 230 C THR 31 -18.256 44.490 16.504 1.00 0.00 ATOM 231 O THR 31 -18.547 43.420 16.021 1.00 0.00 ATOM 232 N GLU 32 -17.212 45.212 16.022 1.00 0.00 ATOM 233 CA GLU 32 -15.916 44.754 15.477 1.00 0.00 ATOM 234 CB GLU 32 -15.587 46.037 14.713 1.00 0.00 ATOM 235 CG GLU 32 -14.109 46.229 14.424 1.00 0.00 ATOM 236 CD GLU 32 -13.796 47.628 13.935 1.00 0.00 ATOM 237 OE1 GLU 32 -14.566 48.148 13.100 1.00 0.00 ATOM 238 OE2 GLU 32 -12.782 48.205 14.380 1.00 0.00 ATOM 239 C GLU 32 -14.574 44.103 15.215 1.00 0.00 ATOM 240 O GLU 32 -14.026 44.396 16.272 1.00 0.00 ATOM 241 N ARG 33 -13.810 43.636 14.233 1.00 0.00 ATOM 242 CA ARG 33 -12.309 43.877 14.274 1.00 0.00 ATOM 243 CB ARG 33 -12.819 42.593 14.947 1.00 0.00 ATOM 244 CG ARG 33 -11.754 41.538 15.251 1.00 0.00 ATOM 245 CD ARG 33 -12.401 40.250 15.780 1.00 0.00 ATOM 246 NE ARG 33 -13.223 40.538 16.952 1.00 0.00 ATOM 247 CZ ARG 33 -14.429 40.027 17.180 1.00 0.00 ATOM 248 NH1 ARG 33 -14.979 39.172 16.323 1.00 0.00 ATOM 249 NH2 ARG 33 -15.110 40.419 18.250 1.00 0.00 ATOM 250 C ARG 33 -10.846 43.788 13.815 1.00 0.00 ATOM 251 O ARG 33 -10.203 43.306 14.719 1.00 0.00 ATOM 252 N PRO 34 -10.486 43.594 12.522 1.00 0.00 ATOM 253 CA PRO 34 -8.929 43.285 12.257 1.00 0.00 ATOM 254 CB PRO 34 -8.932 41.982 11.465 1.00 0.00 ATOM 255 CG PRO 34 -9.179 40.961 12.575 1.00 0.00 ATOM 256 CD PRO 34 -10.191 41.650 13.519 1.00 0.00 ATOM 257 C PRO 34 -7.759 43.461 11.480 1.00 0.00 ATOM 258 O PRO 34 -7.194 44.367 12.128 1.00 0.00 ATOM 259 N PHE 35 -6.979 43.858 10.639 1.00 0.00 ATOM 260 CA PHE 35 -5.959 43.743 9.710 1.00 0.00 ATOM 261 CB PHE 35 -5.858 45.216 10.105 1.00 0.00 ATOM 262 CG PHE 35 -4.753 45.936 9.387 1.00 0.00 ATOM 263 CD1 PHE 35 -4.950 46.430 8.114 1.00 0.00 ATOM 264 CD2 PHE 35 -3.520 46.111 9.985 1.00 0.00 ATOM 265 CE1 PHE 35 -3.936 47.088 7.451 1.00 0.00 ATOM 266 CE2 PHE 35 -2.504 46.770 9.330 1.00 0.00 ATOM 267 CZ PHE 35 -2.712 47.260 8.060 1.00 0.00 ATOM 268 C PHE 35 -4.771 43.644 8.769 1.00 0.00 ATOM 269 O PHE 35 -4.953 44.552 7.990 1.00 0.00 ATOM 270 N TRP 36 -3.518 43.209 9.052 1.00 0.00 ATOM 271 CA TRP 36 -2.497 43.237 7.806 1.00 0.00 ATOM 272 CB TRP 36 -2.207 44.479 6.930 1.00 0.00 ATOM 273 CG TRP 36 -1.595 44.144 5.583 1.00 0.00 ATOM 274 CD1 TRP 36 -0.273 44.265 5.249 1.00 0.00 ATOM 275 CD2 TRP 36 -2.240 43.613 4.402 1.00 0.00 ATOM 276 NE1 TRP 36 -0.031 43.838 3.955 1.00 0.00 ATOM 277 CE2 TRP 36 -1.220 43.430 3.412 1.00 0.00 ATOM 278 CE3 TRP 36 -3.570 43.295 4.078 1.00 0.00 ATOM 279 CZ2 TRP 36 -1.520 42.968 2.132 1.00 0.00 ATOM 280 CZ3 TRP 36 -3.859 42.845 2.800 1.00 0.00 ATOM 281 CH2 TRP 36 -2.844 42.677 1.851 1.00 0.00 ATOM 282 C TRP 36 -1.364 42.559 7.198 1.00 0.00 ATOM 283 O TRP 36 -1.221 41.645 8.002 1.00 0.00 ATOM 284 N ILE 37 -0.440 42.699 6.253 1.00 0.00 ATOM 285 CA ILE 37 0.968 42.161 6.380 1.00 0.00 ATOM 286 CB ILE 37 1.280 40.993 7.340 1.00 0.00 ATOM 287 CG1 ILE 37 0.661 41.264 8.715 1.00 0.00 ATOM 288 CG2 ILE 37 2.787 40.812 7.465 1.00 0.00 ATOM 289 CD1 ILE 37 0.643 40.046 9.639 1.00 0.00 ATOM 290 C ILE 37 2.029 41.471 5.448 1.00 0.00 ATOM 291 O ILE 37 1.685 40.612 4.670 1.00 0.00 ATOM 292 N SER 38 3.172 42.174 5.250 1.00 0.00 ATOM 293 CA SER 38 4.480 41.582 4.835 1.00 0.00 ATOM 294 CB SER 38 3.988 42.249 3.546 1.00 0.00 ATOM 295 OG SER 38 4.765 41.850 2.433 1.00 0.00 ATOM 296 C SER 38 5.932 42.024 4.298 1.00 0.00 ATOM 297 O SER 38 6.396 43.125 4.490 1.00 0.00 ATOM 298 N SER 39 6.739 40.945 4.138 1.00 0.00 ATOM 299 CA SER 39 8.044 40.935 3.462 1.00 0.00 ATOM 300 CB SER 39 8.995 40.367 4.518 1.00 0.00 ATOM 301 OG SER 39 8.399 40.424 5.804 1.00 0.00 ATOM 302 C SER 39 9.259 39.954 2.956 1.00 0.00 ATOM 303 O SER 39 9.263 38.753 3.098 1.00 0.00 ATOM 304 N PHE 40 10.027 40.547 2.008 1.00 0.00 ATOM 305 CA PHE 40 11.345 40.141 1.545 1.00 0.00 ATOM 306 CB PHE 40 10.837 38.730 1.416 1.00 0.00 ATOM 307 CG PHE 40 11.957 37.710 1.511 1.00 0.00 ATOM 308 CD1 PHE 40 12.549 37.422 2.729 1.00 0.00 ATOM 309 CD2 PHE 40 12.393 37.066 0.369 1.00 0.00 ATOM 310 CE1 PHE 40 13.568 36.472 2.815 1.00 0.00 ATOM 311 CE2 PHE 40 13.403 36.132 0.443 1.00 0.00 ATOM 312 CZ PHE 40 13.998 35.854 1.660 1.00 0.00 ATOM 313 C PHE 40 12.554 39.816 0.721 1.00 0.00 ATOM 314 O PHE 40 12.340 39.947 -0.463 1.00 0.00 ATOM 315 N ILE 41 13.811 39.923 1.218 1.00 0.00 ATOM 316 CA ILE 41 15.027 39.685 0.236 1.00 0.00 ATOM 317 CB ILE 41 15.939 40.901 0.213 1.00 0.00 ATOM 318 CG1 ILE 41 15.284 42.102 -0.401 1.00 0.00 ATOM 319 CG2 ILE 41 17.203 40.554 -0.551 1.00 0.00 ATOM 320 CD1 ILE 41 15.941 43.431 0.048 1.00 0.00 ATOM 321 C ILE 41 16.605 39.496 0.655 1.00 0.00 ATOM 322 O ILE 41 17.151 40.106 1.544 1.00 0.00 ATOM 323 N GLY 42 17.216 38.443 0.054 1.00 0.00 ATOM 324 CA GLY 42 18.594 38.135 -0.138 1.00 0.00 ATOM 325 C GLY 42 20.008 38.272 -0.755 1.00 0.00 ATOM 326 O GLY 42 20.175 39.453 -1.040 1.00 0.00 ATOM 327 N ARG 43 21.045 37.452 -0.892 1.00 0.00 ATOM 328 CA ARG 43 22.255 37.539 -1.490 1.00 0.00 ATOM 329 CB ARG 43 23.117 38.757 -1.148 1.00 0.00 ATOM 330 CG ARG 43 22.439 40.102 -1.385 1.00 0.00 ATOM 331 CD ARG 43 21.344 40.329 -0.359 1.00 0.00 ATOM 332 NE ARG 43 20.956 41.731 -0.230 1.00 0.00 ATOM 333 CZ ARG 43 20.377 42.453 -1.186 1.00 0.00 ATOM 334 NH1 ARG 43 20.111 41.917 -2.371 1.00 0.00 ATOM 335 NH2 ARG 43 20.051 43.717 -0.949 1.00 0.00 ATOM 336 C ARG 43 23.467 36.635 -2.156 1.00 0.00 ATOM 337 O ARG 43 23.442 35.426 -2.182 1.00 0.00 ATOM 338 N SER 44 24.267 37.335 -2.998 1.00 0.00 ATOM 339 CA SER 44 25.594 36.949 -3.515 1.00 0.00 ATOM 340 CB SER 44 25.493 37.271 -5.008 1.00 0.00 ATOM 341 OG SER 44 24.140 37.477 -5.380 1.00 0.00 ATOM 342 C SER 44 27.087 36.855 -3.809 1.00 0.00 ATOM 343 O SER 44 27.445 37.884 -3.250 1.00 0.00 ATOM 344 N LYS 45 27.979 36.219 -4.563 1.00 0.00 ATOM 345 CA LYS 45 29.373 36.617 -4.822 1.00 0.00 ATOM 346 CB LYS 45 29.904 36.099 -3.486 1.00 0.00 ATOM 347 CG LYS 45 28.808 35.691 -2.511 1.00 0.00 ATOM 348 CD LYS 45 28.256 36.869 -1.723 1.00 0.00 ATOM 349 CE LYS 45 28.508 36.677 -0.226 1.00 0.00 ATOM 350 NZ LYS 45 27.965 37.773 0.621 1.00 0.00 ATOM 351 C LYS 45 30.388 36.933 -6.011 1.00 0.00 ATOM 352 O LYS 45 29.767 36.744 -7.052 1.00 0.00 TER END