####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS288_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 17 - 45 4.78 10.52 LCS_AVERAGE: 58.16 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.94 13.87 LCS_AVERAGE: 17.67 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.38 14.84 LCS_AVERAGE: 14.67 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 19 0 4 4 4 4 6 8 9 10 12 14 16 18 20 23 26 29 32 35 35 LCS_GDT V 3 V 3 4 5 19 3 4 4 4 5 6 8 9 10 11 12 16 18 20 22 24 29 31 35 35 LCS_GDT Q 4 Q 4 4 5 19 3 4 4 4 5 6 8 9 10 11 12 16 17 20 22 24 29 31 35 35 LCS_GDT G 5 G 5 4 5 19 3 4 4 4 5 6 8 9 10 11 13 16 18 20 23 26 30 33 38 39 LCS_GDT P 6 P 6 4 5 19 2 3 4 5 5 6 8 11 12 14 15 18 22 25 28 31 32 33 38 39 LCS_GDT W 7 W 7 4 5 19 3 3 4 5 5 6 10 11 13 14 16 20 23 26 29 31 32 33 38 39 LCS_GDT V 8 V 8 4 10 19 3 3 4 5 5 7 10 10 13 13 14 16 19 22 24 26 30 33 38 39 LCS_GDT G 9 G 9 9 10 19 8 9 9 9 9 9 10 10 13 13 14 16 17 22 24 26 30 33 38 39 LCS_GDT S 10 S 10 9 10 19 8 9 9 9 9 9 10 11 13 14 15 20 23 26 29 31 32 33 38 39 LCS_GDT S 11 S 11 9 10 19 8 9 9 9 9 9 10 11 13 13 15 16 19 22 24 26 30 33 38 39 LCS_GDT Y 12 Y 12 9 10 19 8 9 9 9 9 9 10 11 13 13 15 16 19 22 24 26 30 33 38 39 LCS_GDT V 13 V 13 9 10 19 8 9 9 9 9 9 10 11 13 14 18 21 24 27 29 31 32 33 38 39 LCS_GDT A 14 A 14 9 10 19 8 9 9 9 9 9 10 11 13 13 15 18 22 26 29 31 32 33 38 39 LCS_GDT E 15 E 15 9 10 19 8 9 9 9 9 9 10 11 13 13 15 16 18 20 23 25 29 33 38 39 LCS_GDT T 16 T 16 9 10 19 8 9 9 9 9 9 10 11 13 13 15 18 21 25 29 31 32 33 38 39 LCS_GDT G 17 G 17 9 10 29 7 9 9 9 9 9 10 14 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT Q 18 Q 18 4 5 29 3 4 4 4 5 9 10 11 17 20 23 25 26 27 29 31 32 33 38 39 LCS_GDT N 19 N 19 4 11 29 3 4 4 4 6 7 10 13 15 20 23 25 26 27 29 31 32 33 38 39 LCS_GDT W 20 W 20 10 11 29 9 10 10 10 10 10 10 13 15 20 23 25 26 27 29 30 32 33 38 39 LCS_GDT A 21 A 21 10 11 29 9 10 10 10 10 10 10 13 15 18 23 25 26 27 29 31 32 33 38 39 LCS_GDT S 22 S 22 10 11 29 9 10 10 10 10 10 10 11 14 17 18 21 23 27 29 31 32 33 38 39 LCS_GDT L 23 L 23 10 11 29 9 10 10 10 10 10 10 12 15 20 23 25 26 27 29 31 32 33 38 39 LCS_GDT A 24 A 24 10 11 29 9 10 10 10 10 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT A 25 A 25 10 11 29 9 10 10 10 10 10 11 13 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT N 26 N 26 10 11 29 9 10 10 10 10 10 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT E 27 E 27 10 11 29 9 10 10 10 10 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT L 28 L 28 10 11 29 9 10 10 10 10 10 12 15 19 22 23 23 26 27 29 31 32 33 38 39 LCS_GDT R 29 R 29 10 11 29 7 10 10 10 10 10 13 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT V 30 V 30 4 5 29 3 4 4 5 8 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT T 31 T 31 4 5 29 3 4 4 6 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT E 32 E 32 4 5 29 3 4 4 5 8 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT R 33 R 33 4 5 29 3 4 4 6 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT P 34 P 34 3 5 29 2 3 4 6 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT F 35 F 35 3 5 29 3 3 4 5 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT W 36 W 36 4 5 29 3 4 5 6 6 10 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT I 37 I 37 4 5 29 3 4 5 6 6 9 12 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT S 38 S 38 4 5 29 3 4 5 6 6 8 10 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT S 39 S 39 4 5 29 3 4 5 6 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT F 40 F 40 4 6 29 3 3 5 5 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT I 41 I 41 5 6 29 4 5 6 6 6 7 13 15 19 22 23 25 26 27 29 30 32 33 35 36 LCS_GDT G 42 G 42 5 6 29 4 5 6 6 8 10 15 17 19 22 23 25 26 27 29 30 32 33 35 36 LCS_GDT R 43 R 43 5 6 29 4 5 6 6 8 10 15 17 19 22 23 25 26 27 29 31 32 33 35 39 LCS_GDT S 44 S 44 5 6 29 4 5 6 6 9 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 LCS_GDT K 45 K 45 5 6 29 4 5 6 6 6 7 8 12 17 19 21 25 26 27 29 31 32 33 38 39 LCS_AVERAGE LCS_A: 30.17 ( 14.67 17.67 58.16 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 10 10 10 11 15 17 19 22 23 25 26 27 29 31 32 33 38 39 GDT PERCENT_AT 20.45 22.73 22.73 22.73 22.73 25.00 34.09 38.64 43.18 50.00 52.27 56.82 59.09 61.36 65.91 70.45 72.73 75.00 86.36 88.64 GDT RMS_LOCAL 0.32 0.38 0.38 0.38 0.38 2.30 2.75 3.10 3.27 3.56 3.70 4.20 4.31 4.49 4.78 5.61 5.61 5.80 6.81 6.88 GDT RMS_ALL_AT 14.98 14.84 14.84 14.84 14.84 10.69 11.33 10.97 11.17 10.80 10.62 11.24 11.26 10.80 10.52 8.14 8.85 8.66 7.82 7.83 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 23.119 0 0.027 0.034 25.469 0.000 0.000 - LGA V 3 V 3 21.416 0 0.060 0.169 23.666 0.000 0.000 18.933 LGA Q 4 Q 4 22.763 0 0.179 0.696 28.485 0.000 0.000 27.251 LGA G 5 G 5 19.527 0 0.276 0.276 20.928 0.000 0.000 - LGA P 6 P 6 17.494 0 0.659 0.581 19.239 0.000 0.000 18.486 LGA W 7 W 7 14.270 0 0.404 1.173 16.168 0.000 0.000 13.280 LGA V 8 V 8 18.690 0 0.060 0.189 22.628 0.000 0.000 22.628 LGA G 9 G 9 14.822 0 0.485 0.485 15.643 0.000 0.000 - LGA S 10 S 10 13.725 0 0.109 0.653 16.505 0.000 0.000 16.505 LGA S 11 S 11 19.014 0 0.058 0.690 23.645 0.000 0.000 23.645 LGA Y 12 Y 12 16.352 0 0.086 1.287 20.842 0.000 0.000 20.842 LGA V 13 V 13 9.367 0 0.036 1.113 11.793 0.000 0.000 7.724 LGA A 14 A 14 13.705 0 0.048 0.048 16.096 0.000 0.000 - LGA E 15 E 15 16.555 0 0.073 0.916 22.696 0.000 0.000 22.696 LGA T 16 T 16 11.805 0 0.038 0.077 15.157 0.000 0.000 11.119 LGA G 17 G 17 5.477 0 0.081 0.081 7.909 10.909 10.909 - LGA Q 18 Q 18 6.420 0 0.639 1.476 8.730 0.000 0.202 7.049 LGA N 19 N 19 9.673 0 0.026 0.809 11.157 0.000 0.000 8.003 LGA W 20 W 20 9.327 0 0.633 0.407 19.252 0.000 0.000 19.252 LGA A 21 A 21 8.677 0 0.028 0.032 10.707 0.000 0.000 - LGA S 22 S 22 10.687 0 0.020 0.608 12.890 0.000 0.000 12.651 LGA L 23 L 23 7.479 0 0.051 0.119 12.477 1.818 0.909 12.229 LGA A 24 A 24 1.699 0 0.044 0.048 3.829 37.727 35.636 - LGA A 25 A 25 5.248 0 0.016 0.032 7.541 6.818 5.455 - LGA N 26 N 26 3.499 0 0.055 0.064 9.067 32.727 16.364 7.500 LGA E 27 E 27 3.242 0 0.136 1.078 8.508 20.000 9.495 7.997 LGA L 28 L 28 5.429 0 0.241 1.279 10.666 4.545 2.273 9.145 LGA R 29 R 29 4.056 0 0.254 1.056 10.404 10.000 3.636 10.404 LGA V 30 V 30 2.129 0 0.637 0.492 5.669 37.727 23.377 5.669 LGA T 31 T 31 3.564 0 0.205 0.225 7.377 23.636 13.506 6.864 LGA E 32 E 32 2.037 0 0.373 1.350 8.515 50.909 22.828 7.991 LGA R 33 R 33 2.425 0 0.046 1.555 13.575 33.182 12.066 13.575 LGA P 34 P 34 1.617 0 0.664 0.646 4.364 33.636 51.948 0.511 LGA F 35 F 35 3.157 0 0.662 1.237 12.202 28.636 10.413 12.202 LGA W 36 W 36 3.470 0 0.630 1.183 13.411 31.364 8.961 13.411 LGA I 37 I 37 4.740 0 0.128 0.772 8.120 2.727 1.364 7.727 LGA S 38 S 38 5.190 0 0.153 0.699 6.355 1.818 1.212 6.149 LGA S 39 S 39 2.530 0 0.423 0.590 4.416 24.545 27.879 3.088 LGA F 40 F 40 1.653 0 0.635 1.552 10.213 40.000 15.537 10.213 LGA I 41 I 41 5.094 0 0.044 0.514 9.689 10.000 5.000 9.552 LGA G 42 G 42 3.261 0 0.047 0.047 4.389 28.182 28.182 - LGA R 43 R 43 3.069 0 0.259 1.292 12.025 33.636 12.727 8.623 LGA S 44 S 44 3.618 0 0.099 0.625 5.537 10.000 10.606 3.068 LGA K 45 K 45 7.096 0 0.018 1.077 9.066 0.000 0.000 6.751 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.812 7.594 9.354 11.694 7.511 3.377 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 3.10 38.636 32.945 0.532 LGA_LOCAL RMSD: 3.098 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.969 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.812 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.846910 * X + 0.531679 * Y + 0.007731 * Z + 1.458025 Y_new = 0.476708 * X + 0.765627 * Y + -0.431930 * Z + 40.866001 Z_new = -0.235567 * X + -0.362121 * Y + -0.901874 * Z + 4.290447 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.628915 0.237802 -2.759776 [DEG: 150.6257 13.6251 -158.1235 ] ZXZ: 0.017896 2.694884 -2.564852 [DEG: 1.0254 154.4055 -146.9552 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS288_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 3.10 32.945 7.81 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS288_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 REFINED PARENT N/A ATOM 9 N ALA 2 7.639 19.721 -1.604 1.00 1.40 ATOM 10 CA ALA 2 7.950 20.152 -2.973 1.00 1.40 ATOM 11 C ALA 2 6.691 20.647 -3.712 1.00 1.40 ATOM 12 O ALA 2 5.562 20.303 -3.351 1.00 1.40 ATOM 13 CB ALA 2 8.645 19.004 -3.713 1.00 1.50 ATOM 14 N VAL 3 6.891 21.472 -4.743 1.00 1.30 ATOM 15 CA VAL 3 5.835 22.230 -5.434 1.00 1.30 ATOM 16 C VAL 3 6.131 22.341 -6.940 1.00 1.30 ATOM 17 O VAL 3 7.296 22.395 -7.334 1.00 1.30 ATOM 18 CB VAL 3 5.737 23.652 -4.836 1.00 1.50 ATOM 19 CG1 VAL 3 4.438 24.356 -5.234 1.00 1.50 ATOM 20 CG2 VAL 3 5.877 23.752 -3.305 1.00 1.50 ATOM 21 N GLN 4 5.089 22.424 -7.775 1.00 1.40 ATOM 22 CA GLN 4 5.166 22.772 -9.201 1.00 1.40 ATOM 23 C GLN 4 3.983 23.686 -9.551 1.00 1.40 ATOM 24 O GLN 4 2.842 23.224 -9.617 1.00 1.40 ATOM 25 CB GLN 4 5.188 21.493 -10.057 1.00 2.40 ATOM 26 CG GLN 4 5.101 21.803 -11.561 1.00 2.40 ATOM 27 CD GLN 4 5.537 20.615 -12.412 1.00 2.40 ATOM 28 OE1 GLN 4 4.799 19.661 -12.630 1.00 2.40 ATOM 29 NE2 GLN 4 6.748 20.626 -12.930 1.00 2.40 ATOM 30 N GLY 5 4.238 24.986 -9.742 1.00 1.80 ATOM 31 CA GLY 5 3.168 25.990 -9.846 1.00 1.80 ATOM 32 C GLY 5 2.290 25.987 -8.574 1.00 1.80 ATOM 33 O GLY 5 2.822 26.240 -7.489 1.00 1.80 ATOM 34 N PRO 6 0.978 25.685 -8.658 1.00 1.60 ATOM 35 CA PRO 6 0.117 25.501 -7.486 1.00 1.60 ATOM 36 C PRO 6 0.538 24.345 -6.548 1.00 1.60 ATOM 37 O PRO 6 0.929 23.270 -7.011 1.00 1.60 ATOM 38 CB PRO 6 -1.300 25.291 -8.033 1.00 1.70 ATOM 39 CG PRO 6 -1.252 25.958 -9.406 1.00 1.70 ATOM 40 CD PRO 6 0.173 25.664 -9.870 1.00 1.70 ATOM 41 N TRP 7 0.424 24.531 -5.224 1.00 1.50 ATOM 42 CA TRP 7 0.749 23.499 -4.215 1.00 1.50 ATOM 43 C TRP 7 -0.367 22.454 -3.981 1.00 1.50 ATOM 44 O TRP 7 -1.542 22.722 -4.236 1.00 1.50 ATOM 45 CB TRP 7 1.226 24.154 -2.907 1.00 3.00 ATOM 46 CG TRP 7 1.785 23.198 -1.891 1.00 3.00 ATOM 47 CD1 TRP 7 2.761 22.291 -2.133 1.00 3.00 ATOM 48 CD2 TRP 7 1.382 22.975 -0.501 1.00 3.00 ATOM 49 NE1 TRP 7 3.011 21.551 -0.998 1.00 3.00 ATOM 50 CE2 TRP 7 2.180 21.918 0.036 1.00 3.00 ATOM 51 CE3 TRP 7 0.413 23.534 0.360 1.00 3.00 ATOM 52 CZ2 TRP 7 2.016 21.435 1.339 1.00 3.00 ATOM 53 CZ3 TRP 7 0.188 23.008 1.644 1.00 3.00 ATOM 54 CH2 TRP 7 0.992 21.965 2.136 1.00 3.00 ATOM 55 N VAL 8 0.009 21.262 -3.475 1.00 2.00 ATOM 56 CA VAL 8 -0.846 20.050 -3.398 1.00 2.00 ATOM 57 C VAL 8 -0.891 19.363 -2.011 1.00 2.00 ATOM 58 O VAL 8 -1.840 18.634 -1.729 1.00 2.00 ATOM 59 CB VAL 8 -0.383 19.034 -4.481 1.00 2.50 ATOM 60 CG1 VAL 8 -1.312 17.820 -4.632 1.00 2.50 ATOM 61 CG2 VAL 8 -0.261 19.668 -5.877 1.00 2.50 ATOM 62 N GLY 9 0.084 19.592 -1.118 1.00 2.40 ATOM 63 CA GLY 9 0.310 18.834 0.137 1.00 2.40 ATOM 64 C GLY 9 -0.667 19.049 1.311 1.00 2.40 ATOM 65 O GLY 9 -0.248 19.060 2.470 1.00 2.40 ATOM 66 N SER 10 -1.965 19.181 1.027 1.00 2.30 ATOM 67 CA SER 10 -3.062 19.465 1.970 1.00 2.30 ATOM 68 C SER 10 -3.042 18.618 3.258 1.00 2.30 ATOM 69 O SER 10 -3.185 19.146 4.364 1.00 2.30 ATOM 70 CB SER 10 -4.381 19.227 1.220 1.00 2.70 ATOM 71 OG SER 10 -5.509 19.453 2.049 1.00 2.70 ATOM 72 N SER 11 -2.811 17.306 3.141 1.00 2.50 ATOM 73 CA SER 11 -2.822 16.385 4.289 1.00 2.50 ATOM 74 C SER 11 -1.679 16.639 5.281 1.00 2.50 ATOM 75 O SER 11 -1.859 16.471 6.488 1.00 2.50 ATOM 76 CB SER 11 -2.754 14.931 3.805 1.00 3.00 ATOM 77 OG SER 11 -3.804 14.660 2.883 1.00 3.00 ATOM 78 N TYR 12 -0.508 17.072 4.797 1.00 2.30 ATOM 79 CA TYR 12 0.674 17.296 5.636 1.00 2.30 ATOM 80 C TYR 12 0.548 18.564 6.485 1.00 2.30 ATOM 81 O TYR 12 0.800 18.509 7.688 1.00 2.30 ATOM 82 CB TYR 12 1.937 17.309 4.768 1.00 3.30 ATOM 83 CG TYR 12 2.134 16.010 4.007 1.00 3.30 ATOM 84 CD1 TYR 12 1.954 15.966 2.610 1.00 3.30 ATOM 85 CD2 TYR 12 2.446 14.831 4.713 1.00 3.30 ATOM 86 CE1 TYR 12 2.076 14.745 1.919 1.00 3.30 ATOM 87 CE2 TYR 12 2.566 13.608 4.027 1.00 3.30 ATOM 88 CZ TYR 12 2.379 13.559 2.628 1.00 3.30 ATOM 89 OH TYR 12 2.490 12.368 1.975 1.00 3.30 ATOM 90 N VAL 13 0.070 19.675 5.907 1.00 2.00 ATOM 91 CA VAL 13 -0.229 20.893 6.683 1.00 2.00 ATOM 92 C VAL 13 -1.322 20.650 7.731 1.00 2.00 ATOM 93 O VAL 13 -1.191 21.110 8.865 1.00 2.00 ATOM 94 CB VAL 13 -0.529 22.101 5.768 1.00 2.10 ATOM 95 CG1 VAL 13 -1.676 21.887 4.776 1.00 2.10 ATOM 96 CG2 VAL 13 -0.850 23.358 6.576 1.00 2.10 ATOM 97 N ALA 14 -2.358 19.867 7.403 1.00 2.40 ATOM 98 CA ALA 14 -3.401 19.492 8.359 1.00 2.40 ATOM 99 C ALA 14 -2.882 18.609 9.517 1.00 2.40 ATOM 100 O ALA 14 -3.364 18.737 10.645 1.00 2.40 ATOM 101 CB ALA 14 -4.541 18.816 7.590 1.00 2.50 ATOM 102 N GLU 15 -1.890 17.743 9.274 1.00 2.60 ATOM 103 CA GLU 15 -1.237 16.937 10.317 1.00 2.60 ATOM 104 C GLU 15 -0.331 17.777 11.239 1.00 2.60 ATOM 105 O GLU 15 -0.466 17.713 12.464 1.00 2.60 ATOM 106 CB GLU 15 -0.453 15.781 9.664 1.00 3.20 ATOM 107 CG GLU 15 0.313 14.931 10.693 1.00 3.20 ATOM 108 CD GLU 15 0.909 13.636 10.103 1.00 3.20 ATOM 109 OE1 GLU 15 1.253 13.585 8.896 1.00 3.20 ATOM 110 OE2 GLU 15 1.065 12.648 10.864 1.00 3.20 ATOM 111 N THR 16 0.600 18.555 10.674 1.00 2.60 ATOM 112 CA THR 16 1.662 19.236 11.443 1.00 2.60 ATOM 113 C THR 16 1.255 20.588 12.031 1.00 2.60 ATOM 114 O THR 16 1.860 21.029 13.008 1.00 2.60 ATOM 115 CB THR 16 2.922 19.457 10.589 1.00 2.80 ATOM 116 OG1 THR 16 2.642 20.307 9.498 1.00 2.80 ATOM 117 CG2 THR 16 3.504 18.148 10.055 1.00 2.80 ATOM 118 N GLY 17 0.230 21.250 11.486 1.00 2.50 ATOM 119 CA GLY 17 -0.096 22.642 11.804 1.00 2.50 ATOM 120 C GLY 17 -0.585 22.953 13.225 1.00 2.50 ATOM 121 O GLY 17 -0.680 24.130 13.549 1.00 2.50 ATOM 122 N GLN 18 -0.891 21.972 14.083 1.00 2.30 ATOM 123 CA GLN 18 -1.522 22.220 15.394 1.00 2.30 ATOM 124 C GLN 18 -0.670 23.077 16.355 1.00 2.30 ATOM 125 O GLN 18 -1.226 23.936 17.042 1.00 2.30 ATOM 126 CB GLN 18 -1.923 20.872 16.025 1.00 3.10 ATOM 127 CG GLN 18 -2.569 20.953 17.425 1.00 3.10 ATOM 128 CD GLN 18 -3.903 21.704 17.456 1.00 3.10 ATOM 129 OE1 GLN 18 -4.977 21.121 17.366 1.00 3.10 ATOM 130 NE2 GLN 18 -3.900 23.015 17.590 1.00 3.10 ATOM 131 N ASN 19 0.655 22.894 16.414 1.00 2.30 ATOM 132 CA ASN 19 1.534 23.737 17.245 1.00 2.30 ATOM 133 C ASN 19 1.880 25.083 16.572 1.00 2.30 ATOM 134 O ASN 19 1.955 26.109 17.251 1.00 2.30 ATOM 135 CB ASN 19 2.778 22.948 17.710 1.00 2.80 ATOM 136 CG ASN 19 3.669 22.369 16.619 1.00 2.80 ATOM 137 OD1 ASN 19 3.364 22.385 15.438 1.00 2.80 ATOM 138 ND2 ASN 19 4.803 21.818 16.990 1.00 2.80 ATOM 139 N TRP 20 2.000 25.124 15.242 1.00 1.90 ATOM 140 CA TRP 20 2.144 26.376 14.482 1.00 1.90 ATOM 141 C TRP 20 0.874 27.247 14.552 1.00 1.90 ATOM 142 O TRP 20 0.968 28.469 14.594 1.00 1.90 ATOM 143 CB TRP 20 2.578 26.062 13.042 1.00 3.00 ATOM 144 CG TRP 20 3.836 25.243 12.944 1.00 3.00 ATOM 145 CD1 TRP 20 3.899 23.933 12.612 1.00 3.00 ATOM 146 CD2 TRP 20 5.215 25.632 13.252 1.00 3.00 ATOM 147 NE1 TRP 20 5.200 23.479 12.718 1.00 3.00 ATOM 148 CE2 TRP 20 6.049 24.476 13.150 1.00 3.00 ATOM 149 CE3 TRP 20 5.846 26.835 13.638 1.00 3.00 ATOM 150 CZ2 TRP 20 7.416 24.496 13.466 1.00 3.00 ATOM 151 CZ3 TRP 20 7.217 26.870 13.962 1.00 3.00 ATOM 152 CH2 TRP 20 8.001 25.704 13.888 1.00 3.00 ATOM 153 N ALA 21 -0.311 26.644 14.690 1.00 1.80 ATOM 154 CA ALA 21 -1.574 27.340 14.953 1.00 1.80 ATOM 155 C ALA 21 -1.598 28.058 16.319 1.00 1.80 ATOM 156 O ALA 21 -2.177 29.139 16.427 1.00 1.80 ATOM 157 CB ALA 21 -2.717 26.324 14.834 1.00 2.00 ATOM 158 N SER 22 -0.923 27.527 17.348 1.00 2.10 ATOM 159 CA SER 22 -0.731 28.233 18.630 1.00 2.10 ATOM 160 C SER 22 0.146 29.480 18.462 1.00 2.10 ATOM 161 O SER 22 -0.156 30.536 19.016 1.00 2.10 ATOM 162 CB SER 22 -0.102 27.308 19.682 1.00 2.50 ATOM 163 OG SER 22 -0.864 26.121 19.850 1.00 2.50 ATOM 164 N LEU 23 1.195 29.395 17.636 1.00 2.10 ATOM 165 CA LEU 23 2.039 30.542 17.280 1.00 2.10 ATOM 166 C LEU 23 1.265 31.570 16.430 1.00 2.10 ATOM 167 O LEU 23 1.368 32.767 16.694 1.00 2.10 ATOM 168 CB LEU 23 3.327 30.040 16.595 1.00 2.90 ATOM 169 CG LEU 23 4.200 29.134 17.492 1.00 2.90 ATOM 170 CD1 LEU 23 5.312 28.494 16.670 1.00 2.90 ATOM 171 CD2 LEU 23 4.846 29.907 18.644 1.00 2.90 ATOM 172 N ALA 24 0.408 31.115 15.508 1.00 1.70 ATOM 173 CA ALA 24 -0.516 31.971 14.756 1.00 1.70 ATOM 174 C ALA 24 -1.488 32.719 15.682 1.00 1.70 ATOM 175 O ALA 24 -1.655 33.928 15.537 1.00 1.70 ATOM 176 CB ALA 24 -1.276 31.127 13.720 1.00 1.80 ATOM 177 N ALA 25 -2.075 32.039 16.675 1.00 1.90 ATOM 178 CA ALA 25 -2.933 32.658 17.687 1.00 1.90 ATOM 179 C ALA 25 -2.178 33.712 18.523 1.00 1.90 ATOM 180 O ALA 25 -2.685 34.812 18.738 1.00 1.90 ATOM 181 CB ALA 25 -3.524 31.548 18.570 1.00 2.10 ATOM 182 N ASN 26 -0.951 33.408 18.960 1.00 2.00 ATOM 183 CA ASN 26 -0.129 34.327 19.757 1.00 2.00 ATOM 184 C ASN 26 0.344 35.564 18.964 1.00 2.00 ATOM 185 O ASN 26 0.518 36.632 19.550 1.00 2.00 ATOM 186 CB ASN 26 1.023 33.535 20.406 1.00 2.70 ATOM 187 CG ASN 26 0.551 32.524 21.447 1.00 2.70 ATOM 188 OD1 ASN 26 -0.561 32.580 21.962 1.00 2.70 ATOM 189 ND2 ASN 26 1.383 31.584 21.829 1.00 2.70 ATOM 190 N GLU 27 0.499 35.460 17.640 1.00 1.80 ATOM 191 CA GLU 27 0.703 36.611 16.745 1.00 1.80 ATOM 192 C GLU 27 -0.602 37.409 16.546 1.00 1.80 ATOM 193 O GLU 27 -0.627 38.625 16.748 1.00 1.80 ATOM 194 CB GLU 27 1.274 36.115 15.404 1.00 2.70 ATOM 195 CG GLU 27 2.799 35.953 15.498 1.00 2.70 ATOM 196 CD GLU 27 3.435 35.279 14.264 1.00 2.70 ATOM 197 OE1 GLU 27 4.551 35.699 13.870 1.00 2.70 ATOM 198 OE2 GLU 27 2.881 34.284 13.745 1.00 2.70 ATOM 199 N LEU 28 -1.702 36.715 16.228 1.00 1.60 ATOM 200 CA LEU 28 -3.033 37.267 15.934 1.00 1.60 ATOM 201 C LEU 28 -3.572 38.201 17.025 1.00 1.60 ATOM 202 O LEU 28 -4.152 39.241 16.706 1.00 1.60 ATOM 203 CB LEU 28 -3.964 36.061 15.681 1.00 2.10 ATOM 204 CG LEU 28 -5.478 36.323 15.550 1.00 2.10 ATOM 205 CD1 LEU 28 -6.113 35.134 14.823 1.00 2.10 ATOM 206 CD2 LEU 28 -6.197 36.426 16.901 1.00 2.10 ATOM 207 N ARG 29 -3.393 37.859 18.312 1.00 2.10 ATOM 208 CA ARG 29 -3.940 38.660 19.430 1.00 2.10 ATOM 209 C ARG 29 -3.325 40.062 19.551 1.00 2.10 ATOM 210 O ARG 29 -3.913 40.925 20.202 1.00 2.10 ATOM 211 CB ARG 29 -3.829 37.895 20.761 1.00 3.70 ATOM 212 CG ARG 29 -4.777 36.684 20.818 1.00 3.70 ATOM 213 CD ARG 29 -4.962 36.138 22.244 1.00 3.70 ATOM 214 NE ARG 29 -3.683 35.870 22.937 1.00 3.70 ATOM 215 CZ ARG 29 -2.876 34.837 22.786 1.00 3.70 ATOM 216 NH1 ARG 29 -1.778 34.744 23.476 1.00 3.70 ATOM 217 NH2 ARG 29 -3.111 33.868 21.950 1.00 3.70 ATOM 218 N VAL 30 -2.171 40.309 18.922 1.00 2.20 ATOM 219 CA VAL 30 -1.510 41.629 18.893 1.00 2.20 ATOM 220 C VAL 30 -1.998 42.491 17.715 1.00 2.20 ATOM 221 O VAL 30 -2.008 43.717 17.799 1.00 2.20 ATOM 222 CB VAL 30 0.031 41.480 18.853 1.00 2.70 ATOM 223 CG1 VAL 30 0.707 42.753 19.376 1.00 2.70 ATOM 224 CG2 VAL 30 0.561 40.322 19.713 1.00 2.70 ATOM 225 N THR 31 -2.427 41.861 16.618 1.00 1.90 ATOM 226 CA THR 31 -2.730 42.473 15.310 1.00 1.90 ATOM 227 C THR 31 -4.224 42.651 15.007 1.00 1.90 ATOM 228 O THR 31 -4.599 42.684 13.843 1.00 1.90 ATOM 229 CB THR 31 -2.026 41.670 14.192 1.00 2.20 ATOM 230 OG1 THR 31 -2.109 40.282 14.426 1.00 2.20 ATOM 231 CG2 THR 31 -0.549 42.022 14.100 1.00 2.20 ATOM 232 N GLU 32 -5.100 42.801 16.004 1.00 2.10 ATOM 233 CA GLU 32 -6.576 42.785 15.858 1.00 2.10 ATOM 234 C GLU 32 -7.196 43.998 15.107 1.00 2.10 ATOM 235 O GLU 32 -7.916 44.817 15.687 1.00 2.10 ATOM 236 CB GLU 32 -7.225 42.584 17.241 1.00 3.00 ATOM 237 CG GLU 32 -6.854 41.236 17.877 1.00 3.00 ATOM 238 CD GLU 32 -7.683 40.928 19.143 1.00 3.00 ATOM 239 OE1 GLU 32 -8.032 41.859 19.910 1.00 3.00 ATOM 240 OE2 GLU 32 -7.988 39.734 19.385 1.00 3.00 ATOM 241 N ARG 33 -6.929 44.103 13.795 1.00 1.50 ATOM 242 CA ARG 33 -7.439 45.117 12.847 1.00 1.50 ATOM 243 C ARG 33 -7.351 44.552 11.414 1.00 1.50 ATOM 244 O ARG 33 -6.317 43.956 11.111 1.00 1.50 ATOM 245 CB ARG 33 -6.594 46.392 13.074 1.00 2.70 ATOM 246 CG ARG 33 -6.968 47.669 12.318 1.00 2.70 ATOM 247 CD ARG 33 -6.356 47.796 10.922 1.00 2.70 ATOM 248 NE ARG 33 -4.883 47.974 10.951 1.00 2.70 ATOM 249 CZ ARG 33 -4.147 48.684 10.113 1.00 2.70 ATOM 250 NH1 ARG 33 -2.861 48.523 10.076 1.00 2.70 ATOM 251 NH2 ARG 33 -4.667 49.512 9.257 1.00 2.70 ATOM 252 N PRO 34 -8.311 44.793 10.490 1.00 1.80 ATOM 253 CA PRO 34 -8.381 44.093 9.185 1.00 1.80 ATOM 254 C PRO 34 -7.153 44.169 8.254 1.00 1.80 ATOM 255 O PRO 34 -6.964 43.304 7.403 1.00 1.80 ATOM 256 CB PRO 34 -9.637 44.641 8.494 1.00 2.10 ATOM 257 CG PRO 34 -10.547 44.992 9.665 1.00 2.10 ATOM 258 CD PRO 34 -9.561 45.527 10.702 1.00 2.10 ATOM 259 N PHE 35 -6.300 45.184 8.415 1.00 1.40 ATOM 260 CA PHE 35 -5.019 45.319 7.703 1.00 1.40 ATOM 261 C PHE 35 -3.797 44.909 8.557 1.00 1.40 ATOM 262 O PHE 35 -2.806 44.469 7.987 1.00 1.40 ATOM 263 CB PHE 35 -4.897 46.762 7.190 1.00 2.00 ATOM 264 CG PHE 35 -5.840 47.192 6.078 1.00 2.00 ATOM 265 CD1 PHE 35 -7.226 47.341 6.302 1.00 2.00 ATOM 266 CD2 PHE 35 -5.308 47.564 4.831 1.00 2.00 ATOM 267 CE1 PHE 35 -8.072 47.796 5.275 1.00 2.00 ATOM 268 CE2 PHE 35 -6.148 48.062 3.823 1.00 2.00 ATOM 269 CZ PHE 35 -7.534 48.155 4.030 1.00 2.00 ATOM 270 N TRP 36 -3.840 44.977 9.905 1.00 1.10 ATOM 271 CA TRP 36 -2.741 44.474 10.769 1.00 1.10 ATOM 272 C TRP 36 -2.646 42.956 10.748 1.00 1.10 ATOM 273 O TRP 36 -1.550 42.404 10.750 1.00 1.10 ATOM 274 CB TRP 36 -2.917 44.831 12.243 1.00 1.80 ATOM 275 CG TRP 36 -2.448 46.149 12.737 1.00 1.80 ATOM 276 CD1 TRP 36 -1.371 46.854 12.321 1.00 1.80 ATOM 277 CD2 TRP 36 -2.952 46.837 13.911 1.00 1.80 ATOM 278 NE1 TRP 36 -1.298 48.025 13.052 1.00 1.80 ATOM 279 CE2 TRP 36 -2.283 48.084 14.023 1.00 1.80 ATOM 280 CE3 TRP 36 -3.932 46.524 14.876 1.00 1.80 ATOM 281 CZ2 TRP 36 -2.671 49.030 14.981 1.00 1.80 ATOM 282 CZ3 TRP 36 -4.319 47.463 15.844 1.00 1.80 ATOM 283 CH2 TRP 36 -3.704 48.721 15.880 1.00 1.80 ATOM 284 N ILE 37 -3.794 42.283 10.714 1.00 1.10 ATOM 285 CA ILE 37 -3.851 40.836 10.514 1.00 1.10 ATOM 286 C ILE 37 -3.082 40.482 9.215 1.00 1.10 ATOM 287 O ILE 37 -2.249 39.584 9.229 1.00 1.10 ATOM 288 CB ILE 37 -5.341 40.425 10.563 1.00 1.50 ATOM 289 CG1 ILE 37 -5.989 40.488 11.964 1.00 1.50 ATOM 290 CG2 ILE 37 -5.602 39.047 9.974 1.00 1.50 ATOM 291 CD1 ILE 37 -5.336 39.645 13.065 1.00 1.50 ATOM 292 N SER 38 -3.217 41.288 8.152 1.00 1.10 ATOM 293 CA SER 38 -2.445 41.179 6.895 1.00 1.10 ATOM 294 C SER 38 -1.035 41.835 6.912 1.00 1.10 ATOM 295 O SER 38 -0.381 41.920 5.871 1.00 1.10 ATOM 296 CB SER 38 -3.319 41.719 5.752 1.00 1.40 ATOM 297 OG SER 38 -2.933 41.176 4.501 1.00 1.40 ATOM 298 N SER 39 -0.548 42.310 8.070 1.00 1.00 ATOM 299 CA SER 39 0.655 43.159 8.213 1.00 1.00 ATOM 300 C SER 39 1.925 42.410 8.650 1.00 1.00 ATOM 301 O SER 39 2.596 41.855 7.779 1.00 1.00 ATOM 302 CB SER 39 0.347 44.380 9.089 1.00 1.20 ATOM 303 OG SER 39 1.456 45.210 9.299 1.00 1.20 ATOM 304 N PHE 40 2.273 42.410 9.956 1.00 0.90 ATOM 305 CA PHE 40 3.458 41.760 10.556 1.00 0.90 ATOM 306 C PHE 40 3.532 41.893 12.098 1.00 0.90 ATOM 307 O PHE 40 2.966 42.829 12.671 1.00 0.90 ATOM 308 CB PHE 40 4.717 42.397 9.956 1.00 1.10 ATOM 309 CG PHE 40 6.045 41.870 10.446 1.00 1.10 ATOM 310 CD1 PHE 40 6.450 40.583 10.060 1.00 1.10 ATOM 311 CD2 PHE 40 6.902 42.679 11.215 1.00 1.10 ATOM 312 CE1 PHE 40 7.740 40.132 10.366 1.00 1.10 ATOM 313 CE2 PHE 40 8.188 42.220 11.540 1.00 1.10 ATOM 314 CZ PHE 40 8.611 40.957 11.093 1.00 1.10 ATOM 315 N ILE 41 4.286 40.990 12.750 1.00 1.10 ATOM 316 CA ILE 41 4.683 41.024 14.174 1.00 1.10 ATOM 317 C ILE 41 6.203 40.789 14.281 1.00 1.10 ATOM 318 O ILE 41 6.736 39.872 13.655 1.00 1.10 ATOM 319 CB ILE 41 3.925 39.966 15.023 1.00 1.30 ATOM 320 CG1 ILE 41 2.388 40.076 14.968 1.00 1.30 ATOM 321 CG2 ILE 41 4.319 40.061 16.514 1.00 1.30 ATOM 322 CD1 ILE 41 1.750 39.392 13.754 1.00 1.30 ATOM 323 N GLY 42 6.897 41.551 15.135 1.00 1.40 ATOM 324 CA GLY 42 8.363 41.505 15.298 1.00 1.40 ATOM 325 C GLY 42 8.964 40.236 15.934 1.00 1.40 ATOM 326 O GLY 42 10.186 40.152 16.068 1.00 1.40 ATOM 327 N ARG 43 8.147 39.252 16.345 1.00 1.30 ATOM 328 CA ARG 43 8.590 37.995 16.985 1.00 1.30 ATOM 329 C ARG 43 8.816 36.878 15.952 1.00 1.30 ATOM 330 O ARG 43 7.884 36.165 15.576 1.00 1.30 ATOM 331 CB ARG 43 7.595 37.611 18.099 1.00 3.50 ATOM 332 CG ARG 43 8.118 36.412 18.908 1.00 3.50 ATOM 333 CD ARG 43 7.159 35.986 20.024 1.00 3.50 ATOM 334 NE ARG 43 7.568 34.674 20.569 1.00 3.50 ATOM 335 CZ ARG 43 6.862 33.872 21.348 1.00 3.50 ATOM 336 NH1 ARG 43 7.321 32.694 21.658 1.00 3.50 ATOM 337 NH2 ARG 43 5.697 34.214 21.821 1.00 3.50 ATOM 338 N SER 44 10.061 36.714 15.514 1.00 1.00 ATOM 339 CA SER 44 10.502 35.703 14.536 1.00 1.00 ATOM 340 C SER 44 10.554 34.265 15.080 1.00 1.00 ATOM 341 O SER 44 10.455 34.026 16.288 1.00 1.00 ATOM 342 CB SER 44 11.873 36.114 13.982 1.00 1.50 ATOM 343 OG SER 44 12.830 36.175 15.032 1.00 1.50 ATOM 344 N LYS 45 10.705 33.303 14.157 1.00 1.00 ATOM 345 CA LYS 45 10.904 31.863 14.400 1.00 1.00 ATOM 346 C LYS 45 12.037 31.318 13.512 1.00 1.00 ATOM 347 O LYS 45 12.268 31.827 12.415 1.00 1.00 ATOM 348 CB LYS 45 9.606 31.084 14.112 1.00 1.90 ATOM 349 CG LYS 45 8.359 31.481 14.925 1.00 1.90 ATOM 350 CD LYS 45 7.472 32.514 14.200 1.00 1.90 ATOM 351 CE LYS 45 6.171 32.807 14.961 1.00 1.90 ATOM 352 NZ LYS 45 6.371 33.778 16.074 1.00 1.90 TER END