####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS288_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 18 - 38 4.82 12.47 LONGEST_CONTINUOUS_SEGMENT: 21 19 - 39 4.82 12.15 LCS_AVERAGE: 44.73 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 22 - 32 1.91 18.72 LCS_AVERAGE: 19.83 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.76 18.09 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.50 17.98 LCS_AVERAGE: 14.88 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 20 0 3 4 4 5 9 11 14 16 17 19 22 25 28 29 32 34 37 38 39 LCS_GDT V 3 V 3 3 5 20 0 3 4 4 4 7 7 8 10 13 17 22 24 28 29 32 34 37 38 39 LCS_GDT Q 4 Q 4 4 5 20 0 3 4 4 4 7 7 8 10 13 14 16 18 24 28 32 34 37 38 39 LCS_GDT G 5 G 5 4 5 20 0 3 4 4 4 7 7 8 12 13 16 19 21 23 28 31 34 37 38 39 LCS_GDT P 6 P 6 4 5 20 2 3 5 5 6 11 12 14 15 18 19 22 25 27 30 32 34 37 38 39 LCS_GDT W 7 W 7 4 5 20 2 3 5 5 5 7 8 13 14 15 18 22 25 27 30 32 34 37 38 39 LCS_GDT V 8 V 8 4 10 20 3 3 5 5 6 11 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT G 9 G 9 9 10 20 4 9 9 9 9 11 12 14 15 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT S 10 S 10 9 10 20 4 9 9 9 9 9 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT S 11 S 11 9 10 20 4 9 9 9 9 10 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT Y 12 Y 12 9 10 20 4 9 9 9 9 11 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT V 13 V 13 9 10 20 4 9 9 9 9 9 10 12 14 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT A 14 A 14 9 10 20 4 9 9 9 9 9 10 11 11 13 14 20 23 25 30 32 34 37 38 39 LCS_GDT E 15 E 15 9 10 20 4 9 9 9 9 9 10 11 13 17 19 22 25 27 30 32 34 37 38 39 LCS_GDT T 16 T 16 9 10 20 4 9 9 9 9 11 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT G 17 G 17 9 10 20 3 9 9 9 9 9 10 11 11 13 18 22 25 28 29 32 34 37 38 39 LCS_GDT Q 18 Q 18 4 10 21 3 3 4 4 6 8 10 13 14 16 19 22 25 28 30 32 34 37 38 39 LCS_GDT N 19 N 19 4 10 21 3 3 4 6 8 10 11 13 16 17 19 22 25 28 30 32 34 37 38 39 LCS_GDT W 20 W 20 9 10 21 6 9 9 9 9 10 14 15 16 17 19 22 25 28 29 32 34 37 38 39 LCS_GDT A 21 A 21 9 10 21 6 9 9 9 9 10 14 15 16 17 18 22 24 28 30 32 34 37 38 39 LCS_GDT S 22 S 22 9 11 21 6 9 9 9 9 12 14 15 16 17 19 22 25 28 30 32 34 37 38 39 LCS_GDT L 23 L 23 9 11 21 6 9 9 9 9 12 14 15 16 17 19 22 25 28 30 32 34 37 38 39 LCS_GDT A 24 A 24 9 11 21 6 9 9 9 9 12 14 15 16 17 18 19 23 27 30 32 34 37 38 39 LCS_GDT A 25 A 25 9 11 21 6 9 9 9 9 12 14 15 16 17 18 19 23 27 30 32 34 37 38 39 LCS_GDT N 26 N 26 9 11 21 5 9 9 9 9 12 13 15 16 17 18 19 23 27 30 32 34 37 38 39 LCS_GDT E 27 E 27 9 11 21 6 9 9 9 9 12 14 15 16 17 18 19 19 24 29 31 34 35 36 39 LCS_GDT L 28 L 28 9 11 21 5 9 9 9 9 12 14 15 16 17 17 19 19 19 25 27 33 34 35 36 LCS_GDT R 29 R 29 5 11 21 4 5 6 8 9 12 14 15 16 17 18 19 24 27 30 32 34 37 38 39 LCS_GDT V 30 V 30 5 11 21 4 5 6 8 9 12 14 15 16 17 19 22 25 27 30 32 34 37 38 39 LCS_GDT T 31 T 31 5 11 21 4 5 6 8 9 12 14 15 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT E 32 E 32 5 11 21 2 5 6 8 9 12 14 15 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT R 33 R 33 4 9 21 2 3 5 6 9 12 14 15 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT P 34 P 34 4 7 21 2 3 4 4 7 11 14 15 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT F 35 F 35 3 4 21 4 4 5 6 8 11 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT W 36 W 36 7 8 21 6 7 8 9 9 11 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT I 37 I 37 7 8 21 6 7 8 9 9 11 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT S 38 S 38 7 8 21 6 7 8 9 9 10 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT S 39 S 39 7 8 21 6 7 8 9 9 10 12 14 16 18 19 22 25 28 30 32 34 37 38 39 LCS_GDT F 40 F 40 7 8 14 6 7 8 9 9 10 11 14 16 18 19 22 25 28 29 32 34 37 38 39 LCS_GDT I 41 I 41 7 8 14 6 7 8 9 9 10 11 13 15 17 19 22 25 28 29 32 34 37 38 39 LCS_GDT G 42 G 42 7 8 14 3 4 6 7 7 9 11 13 14 17 18 22 24 28 28 30 32 34 36 38 LCS_GDT R 43 R 43 4 8 14 3 4 4 5 7 9 10 11 12 13 15 17 21 23 26 27 31 31 34 35 LCS_GDT S 44 S 44 4 5 14 3 4 4 5 7 9 10 11 12 13 14 16 16 17 17 18 19 21 24 25 LCS_GDT K 45 K 45 4 5 14 1 4 4 5 7 9 10 11 12 13 14 16 16 17 17 18 19 20 22 25 LCS_AVERAGE LCS_A: 26.48 ( 14.88 19.83 44.73 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 9 9 9 12 14 15 16 18 19 22 25 28 30 32 34 37 38 39 GDT PERCENT_AT 13.64 20.45 20.45 20.45 20.45 27.27 31.82 34.09 36.36 40.91 43.18 50.00 56.82 63.64 68.18 72.73 77.27 84.09 86.36 88.64 GDT RMS_LOCAL 0.24 0.50 0.50 0.50 0.50 2.06 2.52 2.59 2.96 3.55 3.80 4.16 4.67 4.86 5.53 5.46 5.68 6.11 6.23 6.40 GDT RMS_ALL_AT 18.30 17.98 17.98 17.98 17.98 18.23 17.24 17.35 16.27 9.02 8.66 9.24 8.77 8.69 9.08 8.55 8.58 8.59 8.63 8.68 # Checking swapping # possible swapping detected: Y 12 Y 12 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 27.017 0 0.068 0.067 28.515 0.000 0.000 - LGA V 3 V 3 24.915 0 0.048 1.159 25.739 0.000 0.000 20.512 LGA Q 4 Q 4 26.164 0 0.604 0.989 30.886 0.000 0.000 29.599 LGA G 5 G 5 22.940 0 0.446 0.446 23.959 0.000 0.000 - LGA P 6 P 6 22.839 0 0.632 0.536 25.348 0.000 0.000 24.969 LGA W 7 W 7 21.081 0 0.358 1.302 23.538 0.000 0.000 14.664 LGA V 8 V 8 20.355 0 0.631 1.417 21.870 0.000 0.000 21.870 LGA G 9 G 9 17.458 0 0.527 0.527 18.627 0.000 0.000 - LGA S 10 S 10 21.542 0 0.140 0.752 24.385 0.000 0.000 24.385 LGA S 11 S 11 21.449 0 0.030 0.657 22.737 0.000 0.000 22.737 LGA Y 12 Y 12 16.455 0 0.042 1.219 17.877 0.000 0.000 14.135 LGA V 13 V 13 17.225 0 0.113 1.027 20.210 0.000 0.000 20.210 LGA A 14 A 14 20.150 0 0.128 0.126 22.112 0.000 0.000 - LGA E 15 E 15 17.934 0 0.119 1.523 25.022 0.000 0.000 25.022 LGA T 16 T 16 14.579 0 0.048 0.164 15.482 0.000 0.000 14.226 LGA G 17 G 17 16.438 0 0.685 0.685 16.438 0.000 0.000 - LGA Q 18 Q 18 12.438 0 0.514 1.306 14.745 0.000 0.000 14.334 LGA N 19 N 19 7.573 0 0.065 1.460 9.410 0.455 0.227 7.507 LGA W 20 W 20 3.598 0 0.636 1.097 11.293 14.545 4.156 11.293 LGA A 21 A 21 3.288 0 0.098 0.103 4.281 28.182 23.636 - LGA S 22 S 22 1.837 0 0.033 0.622 2.645 45.000 46.970 1.553 LGA L 23 L 23 1.951 0 0.100 1.392 7.956 62.273 33.409 5.065 LGA A 24 A 24 1.029 0 0.060 0.063 2.036 65.909 60.364 - LGA A 25 A 25 2.901 0 0.118 0.117 3.483 27.727 25.818 - LGA N 26 N 26 3.288 0 0.163 1.193 7.099 17.273 11.818 7.099 LGA E 27 E 27 1.773 0 0.156 0.912 5.847 50.909 36.162 5.847 LGA L 28 L 28 2.306 0 0.690 1.397 8.315 43.182 22.955 8.315 LGA R 29 R 29 1.049 0 0.217 1.626 8.931 52.273 25.455 8.931 LGA V 30 V 30 1.927 0 0.106 0.421 3.343 62.273 47.532 3.343 LGA T 31 T 31 3.169 0 0.669 0.936 5.467 15.909 12.468 3.381 LGA E 32 E 32 2.608 0 0.069 1.500 9.524 42.273 19.394 9.524 LGA R 33 R 33 2.290 0 0.088 0.875 9.328 39.545 14.545 9.328 LGA P 34 P 34 3.717 0 0.644 0.612 6.636 15.455 15.325 4.052 LGA F 35 F 35 8.671 0 0.687 1.441 15.813 0.000 0.000 15.813 LGA W 36 W 36 7.123 0 0.661 1.071 10.013 0.000 0.000 10.013 LGA I 37 I 37 10.444 0 0.079 0.406 14.124 0.000 0.000 9.016 LGA S 38 S 38 16.116 0 0.029 0.048 18.456 0.000 0.000 15.365 LGA S 39 S 39 15.411 0 0.014 0.637 18.155 0.000 0.000 13.228 LGA F 40 F 40 17.940 0 0.073 0.972 22.234 0.000 0.000 13.809 LGA I 41 I 41 23.635 0 0.637 0.543 26.730 0.000 0.000 22.838 LGA G 42 G 42 28.356 0 0.661 0.661 28.361 0.000 0.000 - LGA R 43 R 43 29.472 0 0.114 1.621 33.520 0.000 0.000 33.520 LGA S 44 S 44 35.569 0 0.565 0.710 37.357 0.000 0.000 36.252 LGA K 45 K 45 37.901 0 0.082 1.090 45.360 0.000 0.000 45.360 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.365 8.398 9.783 13.254 9.096 2.649 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.59 36.932 31.494 0.558 LGA_LOCAL RMSD: 2.587 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.352 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.365 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.426985 * X + 0.253781 * Y + 0.867917 * Z + 3.615671 Y_new = 0.903976 * X + -0.095779 * Y + -0.416719 * Z + 47.267693 Z_new = -0.022627 * X + 0.962508 * Y + -0.270308 * Z + 2.752554 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.129520 0.022629 1.844581 [DEG: 64.7167 1.2965 105.6867 ] ZXZ: 1.123165 1.844509 -0.023504 [DEG: 64.3526 105.6826 -1.3467 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS288_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.59 31.494 8.36 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS288_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 REFINED PARENT N/A ATOM 9 N ALA 2 -5.365 38.834 -6.906 1.00 4.90 ATOM 10 CA ALA 2 -5.317 39.496 -8.225 1.00 4.90 ATOM 11 C ALA 2 -5.792 40.966 -8.230 1.00 4.90 ATOM 12 O ALA 2 -6.643 41.368 -7.438 1.00 4.90 ATOM 13 CB ALA 2 -6.135 38.649 -9.210 1.00 5.00 ATOM 14 N VAL 3 -5.239 41.767 -9.151 1.00 4.60 ATOM 15 CA VAL 3 -5.459 43.225 -9.264 1.00 4.60 ATOM 16 C VAL 3 -4.940 43.773 -10.610 1.00 4.60 ATOM 17 O VAL 3 -3.935 43.288 -11.132 1.00 4.60 ATOM 18 CB VAL 3 -4.787 43.944 -8.065 1.00 4.60 ATOM 19 CG1 VAL 3 -3.307 43.566 -7.896 1.00 4.60 ATOM 20 CG2 VAL 3 -4.901 45.470 -8.154 1.00 4.60 ATOM 21 N GLN 4 -5.593 44.811 -11.155 1.00 4.70 ATOM 22 CA GLN 4 -5.157 45.563 -12.357 1.00 4.70 ATOM 23 C GLN 4 -5.221 47.101 -12.172 1.00 4.70 ATOM 24 O GLN 4 -5.264 47.862 -13.141 1.00 4.70 ATOM 25 CB GLN 4 -5.987 45.111 -13.580 1.00 5.10 ATOM 26 CG GLN 4 -5.842 43.630 -13.975 1.00 5.10 ATOM 27 CD GLN 4 -4.472 43.250 -14.550 1.00 5.10 ATOM 28 OE1 GLN 4 -3.545 44.043 -14.676 1.00 5.10 ATOM 29 NE2 GLN 4 -4.295 42.008 -14.953 1.00 5.10 ATOM 30 N GLY 5 -5.269 47.565 -10.917 1.00 4.70 ATOM 31 CA GLY 5 -5.582 48.943 -10.507 1.00 4.70 ATOM 32 C GLY 5 -6.765 48.899 -9.534 1.00 4.70 ATOM 33 O GLY 5 -6.552 49.027 -8.328 1.00 4.70 ATOM 34 N PRO 6 -8.000 48.633 -10.010 1.00 4.80 ATOM 35 CA PRO 6 -9.129 48.299 -9.140 1.00 4.80 ATOM 36 C PRO 6 -8.864 46.942 -8.460 1.00 4.80 ATOM 37 O PRO 6 -8.680 45.919 -9.125 1.00 4.80 ATOM 38 CB PRO 6 -10.357 48.281 -10.059 1.00 4.90 ATOM 39 CG PRO 6 -9.784 47.922 -11.429 1.00 4.90 ATOM 40 CD PRO 6 -8.406 48.579 -11.411 1.00 4.90 ATOM 41 N TRP 7 -8.794 46.933 -7.126 1.00 4.70 ATOM 42 CA TRP 7 -8.534 45.722 -6.336 1.00 4.70 ATOM 43 C TRP 7 -9.774 44.806 -6.250 1.00 4.70 ATOM 44 O TRP 7 -10.896 45.291 -6.088 1.00 4.70 ATOM 45 CB TRP 7 -8.016 46.114 -4.946 1.00 3.90 ATOM 46 CG TRP 7 -7.579 44.932 -4.143 1.00 3.90 ATOM 47 CD1 TRP 7 -8.406 44.143 -3.427 1.00 3.90 ATOM 48 CD2 TRP 7 -6.273 44.282 -4.103 1.00 3.90 ATOM 49 NE1 TRP 7 -7.719 43.027 -2.995 1.00 3.90 ATOM 50 CE2 TRP 7 -6.418 43.032 -3.433 1.00 3.90 ATOM 51 CE3 TRP 7 -4.980 44.618 -4.550 1.00 3.90 ATOM 52 CZ2 TRP 7 -5.367 42.121 -3.300 1.00 3.90 ATOM 53 CZ3 TRP 7 -3.907 43.717 -4.402 1.00 3.90 ATOM 54 CH2 TRP 7 -4.107 42.461 -3.813 1.00 3.90 ATOM 55 N VAL 8 -9.565 43.484 -6.327 1.00 4.80 ATOM 56 CA VAL 8 -10.596 42.419 -6.296 1.00 4.80 ATOM 57 C VAL 8 -10.060 41.135 -5.621 1.00 4.80 ATOM 58 O VAL 8 -8.866 41.028 -5.341 1.00 4.80 ATOM 59 CB VAL 8 -11.125 42.107 -7.722 1.00 4.80 ATOM 60 CG1 VAL 8 -11.937 43.262 -8.322 1.00 4.80 ATOM 61 CG2 VAL 8 -10.024 41.725 -8.721 1.00 4.80 ATOM 62 N GLY 9 -10.926 40.142 -5.364 1.00 4.80 ATOM 63 CA GLY 9 -10.523 38.789 -4.922 1.00 4.80 ATOM 64 C GLY 9 -11.143 38.316 -3.602 1.00 4.80 ATOM 65 O GLY 9 -10.424 37.942 -2.676 1.00 4.80 ATOM 66 N SER 10 -12.477 38.312 -3.503 1.00 5.10 ATOM 67 CA SER 10 -13.232 38.066 -2.257 1.00 5.10 ATOM 68 C SER 10 -13.127 36.632 -1.675 1.00 5.10 ATOM 69 O SER 10 -13.714 36.344 -0.631 1.00 5.10 ATOM 70 CB SER 10 -14.696 38.481 -2.486 1.00 5.30 ATOM 71 OG SER 10 -15.427 38.612 -1.274 1.00 5.30 ATOM 72 N SER 11 -12.379 35.720 -2.308 1.00 5.40 ATOM 73 CA SER 11 -12.030 34.399 -1.751 1.00 5.40 ATOM 74 C SER 11 -10.799 34.438 -0.826 1.00 5.40 ATOM 75 O SER 11 -10.799 33.799 0.229 1.00 5.40 ATOM 76 CB SER 11 -11.804 33.405 -2.897 1.00 5.60 ATOM 77 OG SER 11 -10.766 33.847 -3.761 1.00 5.60 ATOM 78 N TYR 12 -9.762 35.211 -1.177 1.00 4.70 ATOM 79 CA TYR 12 -8.480 35.261 -0.452 1.00 4.70 ATOM 80 C TYR 12 -8.603 35.884 0.947 1.00 4.70 ATOM 81 O TYR 12 -7.969 35.411 1.894 1.00 4.70 ATOM 82 CB TYR 12 -7.458 36.038 -1.295 1.00 5.40 ATOM 83 CG TYR 12 -7.107 35.391 -2.623 1.00 5.40 ATOM 84 CD1 TYR 12 -7.686 35.860 -3.819 1.00 5.40 ATOM 85 CD2 TYR 12 -6.196 34.317 -2.663 1.00 5.40 ATOM 86 CE1 TYR 12 -7.374 35.247 -5.049 1.00 5.40 ATOM 87 CE2 TYR 12 -5.875 33.705 -3.890 1.00 5.40 ATOM 88 CZ TYR 12 -6.470 34.162 -5.086 1.00 5.40 ATOM 89 OH TYR 12 -6.131 33.582 -6.270 1.00 5.40 ATOM 90 N VAL 13 -9.471 36.892 1.100 1.00 4.40 ATOM 91 CA VAL 13 -9.716 37.632 2.358 1.00 4.40 ATOM 92 C VAL 13 -10.135 36.736 3.537 1.00 4.40 ATOM 93 O VAL 13 -9.871 37.078 4.688 1.00 4.40 ATOM 94 CB VAL 13 -10.746 38.757 2.101 1.00 4.40 ATOM 95 CG1 VAL 13 -12.151 38.231 1.788 1.00 4.40 ATOM 96 CG2 VAL 13 -10.855 39.751 3.262 1.00 4.40 ATOM 97 N ALA 14 -10.742 35.574 3.272 1.00 5.10 ATOM 98 CA ALA 14 -11.134 34.599 4.294 1.00 5.10 ATOM 99 C ALA 14 -10.048 33.544 4.620 1.00 5.10 ATOM 100 O ALA 14 -10.114 32.909 5.673 1.00 5.10 ATOM 101 CB ALA 14 -12.425 33.925 3.812 1.00 5.30 ATOM 102 N GLU 15 -9.058 33.346 3.739 1.00 5.00 ATOM 103 CA GLU 15 -8.106 32.218 3.793 1.00 5.00 ATOM 104 C GLU 15 -6.664 32.644 4.114 1.00 5.00 ATOM 105 O GLU 15 -6.114 32.220 5.134 1.00 5.00 ATOM 106 CB GLU 15 -8.171 31.434 2.470 1.00 5.50 ATOM 107 CG GLU 15 -9.538 30.759 2.261 1.00 5.50 ATOM 108 CD GLU 15 -9.666 30.007 0.918 1.00 5.50 ATOM 109 OE1 GLU 15 -8.707 29.971 0.107 1.00 5.50 ATOM 110 OE2 GLU 15 -10.750 29.424 0.666 1.00 5.50 ATOM 111 N THR 16 -6.062 33.490 3.266 1.00 4.30 ATOM 112 CA THR 16 -4.780 34.164 3.558 1.00 4.30 ATOM 113 C THR 16 -5.004 35.457 4.350 1.00 4.30 ATOM 114 O THR 16 -4.095 35.927 5.031 1.00 4.30 ATOM 115 CB THR 16 -3.956 34.437 2.298 1.00 4.30 ATOM 116 OG1 THR 16 -4.720 35.128 1.334 1.00 4.30 ATOM 117 CG2 THR 16 -3.419 33.166 1.649 1.00 4.30 ATOM 118 N GLY 17 -6.210 36.037 4.286 1.00 4.40 ATOM 119 CA GLY 17 -6.661 37.064 5.232 1.00 4.40 ATOM 120 C GLY 17 -7.102 36.387 6.545 1.00 4.40 ATOM 121 O GLY 17 -6.531 35.365 6.918 1.00 4.40 ATOM 122 N GLN 18 -8.113 36.935 7.231 1.00 5.10 ATOM 123 CA GLN 18 -8.852 36.387 8.394 1.00 5.10 ATOM 124 C GLN 18 -8.229 35.172 9.129 1.00 5.10 ATOM 125 O GLN 18 -7.650 35.329 10.202 1.00 5.10 ATOM 126 CB GLN 18 -10.312 36.123 7.963 1.00 5.80 ATOM 127 CG GLN 18 -11.273 35.794 9.123 1.00 5.80 ATOM 128 CD GLN 18 -11.538 36.968 10.074 1.00 5.80 ATOM 129 OE1 GLN 18 -11.304 38.133 9.778 1.00 5.80 ATOM 130 NE2 GLN 18 -12.051 36.708 11.258 1.00 5.80 ATOM 131 N ASN 19 -8.319 33.964 8.556 1.00 4.90 ATOM 132 CA ASN 19 -7.760 32.716 9.095 1.00 4.90 ATOM 133 C ASN 19 -6.262 32.795 9.474 1.00 4.90 ATOM 134 O ASN 19 -5.895 32.331 10.553 1.00 4.90 ATOM 135 CB ASN 19 -8.034 31.617 8.051 1.00 5.30 ATOM 136 CG ASN 19 -7.160 30.386 8.226 1.00 5.30 ATOM 137 OD1 ASN 19 -7.353 29.574 9.119 1.00 5.30 ATOM 138 ND2 ASN 19 -6.167 30.220 7.380 1.00 5.30 ATOM 139 N TRP 20 -5.393 33.398 8.650 1.00 4.30 ATOM 140 CA TRP 20 -3.968 33.576 8.989 1.00 4.30 ATOM 141 C TRP 20 -3.763 34.493 10.200 1.00 4.30 ATOM 142 O TRP 20 -2.852 34.258 10.995 1.00 4.30 ATOM 143 CB TRP 20 -3.182 34.124 7.786 1.00 3.80 ATOM 144 CG TRP 20 -2.650 33.145 6.776 1.00 3.80 ATOM 145 CD1 TRP 20 -2.819 31.801 6.776 1.00 3.80 ATOM 146 CD2 TRP 20 -1.780 33.428 5.630 1.00 3.80 ATOM 147 NE1 TRP 20 -2.098 31.237 5.739 1.00 3.80 ATOM 148 CE2 TRP 20 -1.417 32.192 5.016 1.00 3.80 ATOM 149 CE3 TRP 20 -1.241 34.604 5.061 1.00 3.80 ATOM 150 CZ2 TRP 20 -0.542 32.121 3.920 1.00 3.80 ATOM 151 CZ3 TRP 20 -0.378 34.549 3.949 1.00 3.80 ATOM 152 CH2 TRP 20 -0.018 33.311 3.386 1.00 3.80 ATOM 153 N ALA 21 -4.624 35.498 10.390 1.00 4.50 ATOM 154 CA ALA 21 -4.595 36.327 11.592 1.00 4.50 ATOM 155 C ALA 21 -5.006 35.520 12.833 1.00 4.50 ATOM 156 O ALA 21 -4.276 35.514 13.820 1.00 4.50 ATOM 157 CB ALA 21 -5.471 37.564 11.383 1.00 4.60 ATOM 158 N SER 22 -6.110 34.770 12.765 1.00 5.10 ATOM 159 CA SER 22 -6.574 33.901 13.863 1.00 5.10 ATOM 160 C SER 22 -5.559 32.806 14.232 1.00 5.10 ATOM 161 O SER 22 -5.387 32.499 15.414 1.00 5.10 ATOM 162 CB SER 22 -7.914 33.252 13.497 1.00 5.40 ATOM 163 OG SER 22 -8.898 34.248 13.250 1.00 5.40 ATOM 164 N LEU 23 -4.840 32.261 13.243 1.00 5.00 ATOM 165 CA LEU 23 -3.714 31.337 13.424 1.00 5.00 ATOM 166 C LEU 23 -2.557 31.996 14.201 1.00 5.00 ATOM 167 O LEU 23 -2.112 31.465 15.218 1.00 5.00 ATOM 168 CB LEU 23 -3.276 30.845 12.026 1.00 5.20 ATOM 169 CG LEU 23 -1.940 30.080 11.952 1.00 5.20 ATOM 170 CD1 LEU 23 -1.980 28.765 12.730 1.00 5.20 ATOM 171 CD2 LEU 23 -1.616 29.772 10.490 1.00 5.20 ATOM 172 N ALA 24 -2.081 33.156 13.738 1.00 4.60 ATOM 173 CA ALA 24 -0.921 33.831 14.323 1.00 4.60 ATOM 174 C ALA 24 -1.205 34.521 15.674 1.00 4.60 ATOM 175 O ALA 24 -0.305 34.603 16.507 1.00 4.60 ATOM 176 CB ALA 24 -0.384 34.817 13.283 1.00 4.60 ATOM 177 N ALA 25 -2.437 34.981 15.929 1.00 4.80 ATOM 178 CA ALA 25 -2.803 35.770 17.115 1.00 4.80 ATOM 179 C ALA 25 -2.586 35.056 18.468 1.00 4.80 ATOM 180 O ALA 25 -2.387 35.725 19.485 1.00 4.80 ATOM 181 CB ALA 25 -4.271 36.197 16.973 1.00 4.90 ATOM 182 N ASN 26 -2.623 33.716 18.495 1.00 5.50 ATOM 183 CA ASN 26 -2.286 32.913 19.682 1.00 5.50 ATOM 184 C ASN 26 -0.833 32.385 19.689 1.00 5.50 ATOM 185 O ASN 26 -0.385 31.846 20.704 1.00 5.50 ATOM 186 CB ASN 26 -3.345 31.815 19.895 1.00 5.90 ATOM 187 CG ASN 26 -3.451 30.817 18.752 1.00 5.90 ATOM 188 OD1 ASN 26 -2.521 30.089 18.437 1.00 5.90 ATOM 189 ND2 ASN 26 -4.593 30.742 18.107 1.00 5.90 ATOM 190 N GLU 27 -0.076 32.564 18.598 1.00 5.60 ATOM 191 CA GLU 27 1.373 32.320 18.564 1.00 5.60 ATOM 192 C GLU 27 2.117 33.513 19.198 1.00 5.60 ATOM 193 O GLU 27 2.891 33.317 20.139 1.00 5.60 ATOM 194 CB GLU 27 1.847 32.042 17.128 1.00 6.20 ATOM 195 CG GLU 27 1.301 30.715 16.580 1.00 6.20 ATOM 196 CD GLU 27 1.838 30.365 15.175 1.00 6.20 ATOM 197 OE1 GLU 27 2.134 31.277 14.367 1.00 6.20 ATOM 198 OE2 GLU 27 1.957 29.153 14.868 1.00 6.20 ATOM 199 N LEU 28 1.834 34.742 18.734 1.00 5.20 ATOM 200 CA LEU 28 2.236 36.014 19.366 1.00 5.20 ATOM 201 C LEU 28 1.326 37.179 18.885 1.00 5.20 ATOM 202 O LEU 28 0.298 36.932 18.249 1.00 5.20 ATOM 203 CB LEU 28 3.759 36.250 19.189 1.00 5.90 ATOM 204 CG LEU 28 4.426 37.204 20.212 1.00 5.90 ATOM 205 CD1 LEU 28 4.020 36.940 21.667 1.00 5.90 ATOM 206 CD2 LEU 28 5.949 37.061 20.141 1.00 5.90 ATOM 207 N ARG 29 1.616 38.441 19.240 1.00 4.50 ATOM 208 CA ARG 29 0.701 39.584 19.045 1.00 4.50 ATOM 209 C ARG 29 0.559 40.076 17.591 1.00 4.50 ATOM 210 O ARG 29 1.112 41.102 17.181 1.00 4.50 ATOM 211 CB ARG 29 1.013 40.716 20.047 1.00 6.30 ATOM 212 CG ARG 29 -0.130 41.756 20.070 1.00 6.30 ATOM 213 CD ARG 29 0.057 42.848 21.132 1.00 6.30 ATOM 214 NE ARG 29 -0.303 42.384 22.490 1.00 6.30 ATOM 215 CZ ARG 29 -1.504 42.393 23.048 1.00 6.30 ATOM 216 NH1 ARG 29 -1.654 42.043 24.293 1.00 6.30 ATOM 217 NH2 ARG 29 -2.577 42.746 22.397 1.00 6.30 ATOM 218 N VAL 30 -0.258 39.351 16.830 1.00 3.10 ATOM 219 CA VAL 30 -0.829 39.790 15.547 1.00 3.10 ATOM 220 C VAL 30 -2.048 40.676 15.876 1.00 3.10 ATOM 221 O VAL 30 -2.827 40.337 16.771 1.00 3.10 ATOM 222 CB VAL 30 -1.176 38.569 14.655 1.00 3.00 ATOM 223 CG1 VAL 30 -2.590 38.576 14.067 1.00 3.00 ATOM 224 CG2 VAL 30 -0.203 38.479 13.475 1.00 3.00 ATOM 225 N THR 31 -2.231 41.801 15.171 1.00 2.70 ATOM 226 CA THR 31 -3.302 42.789 15.457 1.00 2.70 ATOM 227 C THR 31 -4.126 43.108 14.204 1.00 2.70 ATOM 228 O THR 31 -3.543 43.344 13.146 1.00 2.70 ATOM 229 CB THR 31 -2.701 44.081 16.051 1.00 2.90 ATOM 230 OG1 THR 31 -1.889 43.798 17.173 1.00 2.90 ATOM 231 CG2 THR 31 -3.764 45.074 16.528 1.00 2.90 ATOM 232 N GLU 32 -5.459 43.189 14.311 1.00 2.00 ATOM 233 CA GLU 32 -6.394 43.398 13.183 1.00 2.00 ATOM 234 C GLU 32 -7.657 44.202 13.567 1.00 2.00 ATOM 235 O GLU 32 -8.045 44.228 14.738 1.00 2.00 ATOM 236 CB GLU 32 -6.785 42.022 12.597 1.00 2.30 ATOM 237 CG GLU 32 -7.813 41.206 13.406 1.00 2.30 ATOM 238 CD GLU 32 -9.291 41.578 13.141 1.00 2.30 ATOM 239 OE1 GLU 32 -9.668 41.852 11.976 1.00 2.30 ATOM 240 OE2 GLU 32 -10.097 41.565 14.103 1.00 2.30 ATOM 241 N ARG 33 -8.326 44.804 12.569 1.00 2.20 ATOM 242 CA ARG 33 -9.670 45.428 12.620 1.00 2.20 ATOM 243 C ARG 33 -10.378 45.242 11.258 1.00 2.20 ATOM 244 O ARG 33 -9.696 45.202 10.227 1.00 2.20 ATOM 245 CB ARG 33 -9.582 46.936 12.950 1.00 4.00 ATOM 246 CG ARG 33 -9.248 47.327 14.402 1.00 4.00 ATOM 247 CD ARG 33 -10.336 46.964 15.428 1.00 4.00 ATOM 248 NE ARG 33 -10.098 45.650 16.057 1.00 4.00 ATOM 249 CZ ARG 33 -10.635 45.189 17.174 1.00 4.00 ATOM 250 NH1 ARG 33 -10.248 44.044 17.659 1.00 4.00 ATOM 251 NH2 ARG 33 -11.550 45.845 17.832 1.00 4.00 ATOM 252 N PRO 34 -11.727 45.196 11.197 1.00 2.50 ATOM 253 CA PRO 34 -12.459 44.918 9.954 1.00 2.50 ATOM 254 C PRO 34 -12.414 46.063 8.928 1.00 2.50 ATOM 255 O PRO 34 -12.546 45.807 7.733 1.00 2.50 ATOM 256 CB PRO 34 -13.894 44.608 10.394 1.00 2.80 ATOM 257 CG PRO 34 -14.051 45.431 11.672 1.00 2.80 ATOM 258 CD PRO 34 -12.663 45.332 12.308 1.00 2.80 ATOM 259 N PHE 35 -12.155 47.306 9.357 1.00 2.40 ATOM 260 CA PHE 35 -12.073 48.494 8.485 1.00 2.40 ATOM 261 C PHE 35 -10.990 48.404 7.393 1.00 2.40 ATOM 262 O PHE 35 -11.033 49.149 6.415 1.00 2.40 ATOM 263 CB PHE 35 -11.837 49.734 9.362 1.00 3.00 ATOM 264 CG PHE 35 -12.903 49.954 10.420 1.00 3.00 ATOM 265 CD1 PHE 35 -12.575 49.907 11.791 1.00 3.00 ATOM 266 CD2 PHE 35 -14.237 50.189 10.031 1.00 3.00 ATOM 267 CE1 PHE 35 -13.578 50.080 12.762 1.00 3.00 ATOM 268 CE2 PHE 35 -15.239 50.358 11.003 1.00 3.00 ATOM 269 CZ PHE 35 -14.910 50.301 12.368 1.00 3.00 ATOM 270 N TRP 36 -10.025 47.492 7.557 1.00 1.90 ATOM 271 CA TRP 36 -8.953 47.213 6.592 1.00 1.90 ATOM 272 C TRP 36 -9.148 45.872 5.859 1.00 1.90 ATOM 273 O TRP 36 -8.542 45.648 4.812 1.00 1.90 ATOM 274 CB TRP 36 -7.614 47.271 7.336 1.00 2.90 ATOM 275 CG TRP 36 -7.495 48.326 8.402 1.00 2.90 ATOM 276 CD1 TRP 36 -7.906 49.614 8.317 1.00 2.90 ATOM 277 CD2 TRP 36 -6.997 48.164 9.763 1.00 2.90 ATOM 278 NE1 TRP 36 -7.660 50.264 9.512 1.00 2.90 ATOM 279 CE2 TRP 36 -7.098 49.414 10.440 1.00 2.90 ATOM 280 CE3 TRP 36 -6.501 47.071 10.502 1.00 2.90 ATOM 281 CZ2 TRP 36 -6.692 49.578 11.772 1.00 2.90 ATOM 282 CZ3 TRP 36 -6.108 47.221 11.845 1.00 2.90 ATOM 283 CH2 TRP 36 -6.189 48.473 12.477 1.00 2.90 ATOM 284 N ILE 37 -10.021 44.994 6.375 1.00 2.20 ATOM 285 CA ILE 37 -10.476 43.768 5.696 1.00 2.20 ATOM 286 C ILE 37 -11.492 44.115 4.594 1.00 2.20 ATOM 287 O ILE 37 -11.454 43.525 3.514 1.00 2.20 ATOM 288 CB ILE 37 -10.991 42.732 6.743 1.00 2.70 ATOM 289 CG1 ILE 37 -10.238 41.379 6.644 1.00 2.70 ATOM 290 CG2 ILE 37 -12.507 42.464 6.699 1.00 2.70 ATOM 291 CD1 ILE 37 -9.351 41.118 7.868 1.00 2.70 ATOM 292 N SER 38 -12.332 45.138 4.802 1.00 2.90 ATOM 293 CA SER 38 -13.216 45.685 3.760 1.00 2.90 ATOM 294 C SER 38 -12.443 46.342 2.604 1.00 2.90 ATOM 295 O SER 38 -12.962 46.425 1.493 1.00 2.90 ATOM 296 CB SER 38 -14.224 46.665 4.372 1.00 3.10 ATOM 297 OG SER 38 -13.564 47.764 4.974 1.00 3.10 ATOM 298 N SER 39 -11.167 46.707 2.791 1.00 2.80 ATOM 299 CA SER 39 -10.276 47.177 1.714 1.00 2.80 ATOM 300 C SER 39 -9.949 46.110 0.651 1.00 2.80 ATOM 301 O SER 39 -9.406 46.445 -0.400 1.00 2.80 ATOM 302 CB SER 39 -8.975 47.744 2.291 1.00 2.90 ATOM 303 OG SER 39 -9.217 48.603 3.392 1.00 2.90 ATOM 304 N PHE 40 -10.289 44.834 0.884 1.00 2.70 ATOM 305 CA PHE 40 -10.239 43.774 -0.137 1.00 2.70 ATOM 306 C PHE 40 -11.425 43.866 -1.133 1.00 2.70 ATOM 307 O PHE 40 -11.385 43.261 -2.202 1.00 2.70 ATOM 308 CB PHE 40 -10.201 42.394 0.562 1.00 3.70 ATOM 309 CG PHE 40 -9.178 41.408 0.014 1.00 3.70 ATOM 310 CD1 PHE 40 -8.142 40.943 0.848 1.00 3.70 ATOM 311 CD2 PHE 40 -9.267 40.919 -1.303 1.00 3.70 ATOM 312 CE1 PHE 40 -7.176 40.049 0.355 1.00 3.70 ATOM 313 CE2 PHE 40 -8.278 40.053 -1.807 1.00 3.70 ATOM 314 CZ PHE 40 -7.227 39.628 -0.981 1.00 3.70 ATOM 315 N ILE 41 -12.493 44.606 -0.797 1.00 2.80 ATOM 316 CA ILE 41 -13.767 44.604 -1.540 1.00 2.80 ATOM 317 C ILE 41 -13.774 45.593 -2.730 1.00 2.80 ATOM 318 O ILE 41 -14.453 45.326 -3.726 1.00 2.80 ATOM 319 CB ILE 41 -14.956 44.814 -0.559 1.00 3.00 ATOM 320 CG1 ILE 41 -14.944 43.741 0.567 1.00 3.00 ATOM 321 CG2 ILE 41 -16.315 44.786 -1.286 1.00 3.00 ATOM 322 CD1 ILE 41 -15.979 43.961 1.681 1.00 3.00 ATOM 323 N GLY 42 -13.025 46.709 -2.683 1.00 2.30 ATOM 324 CA GLY 42 -13.076 47.728 -3.752 1.00 2.30 ATOM 325 C GLY 42 -12.074 48.894 -3.692 1.00 2.30 ATOM 326 O GLY 42 -11.144 48.907 -2.884 1.00 2.30 ATOM 327 N ARG 43 -12.294 49.877 -4.582 1.00 1.90 ATOM 328 CA ARG 43 -11.528 51.130 -4.789 1.00 1.90 ATOM 329 C ARG 43 -12.448 52.211 -5.383 1.00 1.90 ATOM 330 O ARG 43 -13.048 51.957 -6.429 1.00 1.90 ATOM 331 CB ARG 43 -10.365 50.840 -5.769 1.00 3.10 ATOM 332 CG ARG 43 -9.525 52.078 -6.172 1.00 3.10 ATOM 333 CD ARG 43 -9.120 52.080 -7.655 1.00 3.10 ATOM 334 NE ARG 43 -10.287 52.296 -8.539 1.00 3.10 ATOM 335 CZ ARG 43 -10.277 52.393 -9.858 1.00 3.10 ATOM 336 NH1 ARG 43 -11.388 52.614 -10.502 1.00 3.10 ATOM 337 NH2 ARG 43 -9.183 52.282 -10.556 1.00 3.10 ATOM 338 N SER 44 -12.500 53.425 -4.819 1.00 1.70 ATOM 339 CA SER 44 -13.190 54.565 -5.466 1.00 1.70 ATOM 340 C SER 44 -12.302 55.310 -6.484 1.00 1.70 ATOM 341 O SER 44 -12.643 55.359 -7.667 1.00 1.70 ATOM 342 CB SER 44 -13.794 55.521 -4.430 1.00 1.70 ATOM 343 OG SER 44 -12.794 56.142 -3.647 1.00 1.70 ATOM 344 N LYS 45 -11.158 55.857 -6.046 1.00 1.70 ATOM 345 CA LYS 45 -10.248 56.738 -6.821 1.00 1.70 ATOM 346 C LYS 45 -8.763 56.384 -6.621 1.00 1.70 ATOM 347 O LYS 45 -8.423 55.573 -5.757 1.00 1.70 ATOM 348 CB LYS 45 -10.522 58.211 -6.425 1.00 2.50 ATOM 349 CG LYS 45 -11.942 58.736 -6.714 1.00 2.50 ATOM 350 CD LYS 45 -12.282 58.809 -8.211 1.00 2.50 ATOM 351 CE LYS 45 -13.739 59.250 -8.410 1.00 2.50 ATOM 352 NZ LYS 45 -14.125 59.234 -9.848 1.00 2.50 TER END