####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS288_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 18 - 37 4.84 11.05 LONGEST_CONTINUOUS_SEGMENT: 20 19 - 38 4.97 10.28 LCS_AVERAGE: 41.89 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.90 17.13 LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.86 15.46 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 1.93 14.60 LONGEST_CONTINUOUS_SEGMENT: 10 36 - 45 1.48 13.40 LCS_AVERAGE: 20.04 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.61 18.44 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.69 16.35 LCS_AVERAGE: 14.77 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 14 3 3 6 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT V 3 V 3 5 6 14 3 4 6 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT Q 4 Q 4 5 6 15 3 4 5 5 6 6 11 14 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT G 5 G 5 5 6 15 3 4 5 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT P 6 P 6 5 6 19 1 4 6 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT W 7 W 7 4 6 19 1 3 4 5 6 8 11 13 17 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT V 8 V 8 4 10 19 3 3 4 6 8 9 10 12 14 15 19 22 25 30 32 33 35 37 39 39 LCS_GDT G 9 G 9 9 10 19 3 7 9 9 9 9 10 12 14 15 17 21 23 30 32 33 35 37 39 39 LCS_GDT S 10 S 10 9 10 19 7 8 9 9 9 9 10 12 14 15 17 21 23 30 32 33 35 37 39 39 LCS_GDT S 11 S 11 9 10 19 7 8 9 9 9 12 13 14 15 18 21 24 24 27 30 33 35 37 39 39 LCS_GDT Y 12 Y 12 9 10 19 7 8 9 9 9 10 10 14 15 16 20 24 24 30 32 33 35 37 39 39 LCS_GDT V 13 V 13 9 10 19 7 8 9 9 9 9 10 14 14 18 21 24 24 30 32 33 35 37 39 39 LCS_GDT A 14 A 14 9 10 19 7 8 9 9 9 9 10 11 11 17 21 24 24 27 30 33 35 37 39 39 LCS_GDT E 15 E 15 9 10 19 7 8 9 9 9 9 10 12 13 15 18 24 24 29 32 33 35 37 39 39 LCS_GDT T 16 T 16 9 10 19 7 8 9 9 9 10 13 14 15 18 21 24 24 30 32 33 35 37 39 39 LCS_GDT G 17 G 17 9 10 19 3 8 9 9 9 9 10 11 11 17 21 24 24 27 28 29 33 37 39 39 LCS_GDT Q 18 Q 18 4 5 20 3 3 4 4 6 9 10 11 11 16 21 24 24 30 32 33 35 37 39 39 LCS_GDT N 19 N 19 4 10 20 3 3 4 5 9 10 13 14 17 21 22 24 25 30 32 33 35 37 39 39 LCS_GDT W 20 W 20 9 10 20 6 8 9 9 9 12 13 14 16 18 21 24 25 27 29 32 35 37 39 39 LCS_GDT A 21 A 21 9 10 20 6 8 9 9 9 9 11 14 18 21 22 24 25 30 32 33 35 37 39 39 LCS_GDT S 22 S 22 9 10 20 6 8 9 9 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT L 23 L 23 9 10 20 6 8 9 9 9 9 11 15 17 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT A 24 A 24 9 10 20 6 8 9 9 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT A 25 A 25 9 10 20 6 8 9 9 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT N 26 N 26 9 10 20 6 8 9 9 9 9 10 15 16 17 20 23 25 30 32 33 35 37 39 39 LCS_GDT E 27 E 27 9 10 20 6 8 9 9 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT L 28 L 28 9 10 20 0 7 9 9 9 9 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT R 29 R 29 4 10 20 3 4 6 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT V 30 V 30 4 7 20 3 4 6 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT T 31 T 31 4 7 20 3 3 5 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT E 32 E 32 4 7 20 3 3 4 7 9 12 13 15 18 21 22 23 25 30 32 33 35 37 39 39 LCS_GDT R 33 R 33 4 5 20 3 3 4 6 8 10 11 14 18 21 22 24 25 30 32 33 35 37 39 39 LCS_GDT P 34 P 34 4 4 20 2 3 4 6 8 10 11 13 18 21 22 24 25 30 32 33 35 37 39 39 LCS_GDT F 35 F 35 3 7 20 3 3 4 5 7 10 13 14 15 18 21 24 25 29 32 33 35 37 39 39 LCS_GDT W 36 W 36 5 10 20 3 4 6 10 10 12 12 14 18 21 22 24 25 30 32 33 35 37 39 39 LCS_GDT I 37 I 37 5 10 20 4 4 7 10 10 12 13 14 15 18 22 24 25 30 32 33 35 37 39 39 LCS_GDT S 38 S 38 5 10 20 4 4 7 10 10 12 13 14 15 18 21 24 24 27 30 32 35 37 39 39 LCS_GDT S 39 S 39 5 10 15 4 4 7 10 10 12 13 14 15 18 21 24 24 27 28 32 35 37 39 39 LCS_GDT F 40 F 40 6 10 15 4 5 7 10 10 12 13 14 15 18 21 24 24 27 30 32 35 37 39 39 LCS_GDT I 41 I 41 6 10 15 4 5 6 10 10 12 13 14 15 18 21 24 24 27 28 32 33 34 37 39 LCS_GDT G 42 G 42 6 10 15 3 5 6 10 10 12 13 14 15 18 21 24 24 27 28 29 29 30 32 34 LCS_GDT R 43 R 43 6 10 15 3 5 7 10 10 12 13 14 15 18 21 24 24 27 28 29 29 30 32 33 LCS_GDT S 44 S 44 6 10 15 3 5 7 10 10 12 13 14 15 18 21 24 24 27 28 29 29 29 32 33 LCS_GDT K 45 K 45 6 10 15 3 3 7 10 10 12 12 14 15 18 21 24 24 27 28 29 29 29 30 33 LCS_AVERAGE LCS_A: 25.57 ( 14.77 20.04 41.89 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 9 10 10 12 13 15 18 21 22 24 25 30 32 33 35 37 39 39 GDT PERCENT_AT 15.91 18.18 20.45 22.73 22.73 27.27 29.55 34.09 40.91 47.73 50.00 54.55 56.82 68.18 72.73 75.00 79.55 84.09 88.64 88.64 GDT RMS_LOCAL 0.17 0.37 0.61 1.48 1.48 2.05 2.20 2.54 3.25 3.66 3.83 4.07 4.29 5.60 5.77 5.94 6.15 6.39 6.60 6.60 GDT RMS_ALL_AT 18.97 18.70 18.44 13.40 13.40 11.98 12.10 12.08 11.43 10.97 10.78 11.57 10.58 9.48 9.33 9.26 9.05 8.82 8.74 8.74 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.790 0 0.045 0.062 4.887 22.727 20.364 - LGA V 3 V 3 1.891 0 0.041 0.879 5.614 48.636 30.390 5.080 LGA Q 4 Q 4 4.608 0 0.550 1.313 13.658 16.364 7.273 10.594 LGA G 5 G 5 2.497 0 0.091 0.091 5.090 18.636 18.636 - LGA P 6 P 6 1.714 0 0.586 0.517 3.443 33.636 38.961 2.486 LGA W 7 W 7 7.420 0 0.385 0.908 15.783 0.000 0.000 15.783 LGA V 8 V 8 10.128 0 0.648 0.908 12.219 0.000 0.000 10.324 LGA G 9 G 9 14.322 0 0.515 0.515 15.643 0.000 0.000 - LGA S 10 S 10 17.948 0 0.358 0.341 19.610 0.000 0.000 18.825 LGA S 11 S 11 17.226 0 0.028 0.654 18.728 0.000 0.000 18.728 LGA Y 12 Y 12 13.803 0 0.133 1.174 14.571 0.000 0.000 14.571 LGA V 13 V 13 15.573 0 0.158 1.063 19.490 0.000 0.000 19.490 LGA A 14 A 14 18.543 0 0.216 0.214 20.262 0.000 0.000 - LGA E 15 E 15 15.961 0 0.061 1.508 22.675 0.000 0.000 22.675 LGA T 16 T 16 13.571 0 0.278 1.120 14.168 0.000 0.000 12.960 LGA G 17 G 17 16.598 0 0.693 0.693 16.598 0.000 0.000 - LGA Q 18 Q 18 14.213 0 0.570 1.419 18.646 0.000 0.000 17.858 LGA N 19 N 19 9.493 0 0.013 1.407 11.525 0.000 0.000 10.339 LGA W 20 W 20 7.744 0 0.630 1.244 16.943 0.000 0.000 16.374 LGA A 21 A 21 5.598 0 0.023 0.031 6.340 7.273 5.818 - LGA S 22 S 22 1.094 0 0.047 0.629 2.899 48.636 45.455 2.899 LGA L 23 L 23 3.704 0 0.088 0.224 9.094 28.636 14.318 9.094 LGA A 24 A 24 2.448 0 0.065 0.075 3.978 38.636 33.091 - LGA A 25 A 25 3.022 0 0.097 0.099 4.489 20.000 19.636 - LGA N 26 N 26 3.948 0 0.109 0.143 5.619 12.273 6.364 5.428 LGA E 27 E 27 1.643 0 0.290 0.869 6.532 36.364 29.697 6.532 LGA L 28 L 28 3.445 0 0.580 0.529 8.522 33.182 16.591 8.522 LGA R 29 R 29 0.961 0 0.483 1.533 11.584 70.909 28.760 11.584 LGA V 30 V 30 0.539 0 0.109 1.123 3.082 78.182 68.312 3.082 LGA T 31 T 31 3.213 0 0.678 0.653 5.990 16.818 15.325 3.672 LGA E 32 E 32 3.060 0 0.060 1.291 8.093 11.818 10.101 8.093 LGA R 33 R 33 8.250 0 0.041 1.075 14.387 0.000 0.000 14.387 LGA P 34 P 34 8.858 0 0.562 0.646 9.660 0.000 0.000 9.526 LGA F 35 F 35 10.460 0 0.678 1.200 20.120 0.000 0.000 20.120 LGA W 36 W 36 6.714 0 0.588 1.349 12.358 0.000 0.519 12.358 LGA I 37 I 37 8.431 0 0.133 0.427 11.525 0.000 0.000 10.376 LGA S 38 S 38 11.597 0 0.077 0.087 13.310 0.000 0.000 10.904 LGA S 39 S 39 11.929 0 0.244 0.273 14.757 0.000 0.000 10.755 LGA F 40 F 40 12.740 0 0.033 1.028 15.543 0.000 0.000 9.126 LGA I 41 I 41 15.804 0 0.606 0.654 18.618 0.000 0.000 14.396 LGA G 42 G 42 22.122 0 0.113 0.113 25.122 0.000 0.000 - LGA R 43 R 43 22.726 0 0.111 1.350 24.363 0.000 0.000 24.363 LGA S 44 S 44 26.046 0 0.115 0.667 28.570 0.000 0.000 28.067 LGA K 45 K 45 26.487 0 0.068 0.897 33.102 0.000 0.000 32.134 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.291 8.276 9.750 12.335 9.309 2.701 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.54 37.500 32.791 0.567 LGA_LOCAL RMSD: 2.544 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 12.081 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.291 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.819770 * X + 0.254078 * Y + -0.513246 * Z + 8.568745 Y_new = -0.286401 * X + -0.957963 * Y + -0.016785 * Z + 51.446487 Z_new = -0.495935 * X + 0.133235 * Y + 0.858077 * Z + 10.729505 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.805481 0.518912 0.154041 [DEG: -160.7422 29.7314 8.8259 ] ZXZ: -1.538105 0.539283 -1.308340 [DEG: -88.1269 30.8986 -74.9624 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS288_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.54 32.791 8.29 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS288_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 REFINED PARENT N/A ATOM 9 N ALA 2 8.729 37.071 15.150 1.00 4.80 ATOM 10 CA ALA 2 8.821 36.633 13.750 1.00 4.80 ATOM 11 C ALA 2 8.303 37.710 12.776 1.00 4.80 ATOM 12 O ALA 2 7.645 38.671 13.181 1.00 4.80 ATOM 13 CB ALA 2 8.054 35.309 13.607 1.00 5.00 ATOM 14 N VAL 3 8.587 37.528 11.484 1.00 3.60 ATOM 15 CA VAL 3 8.023 38.301 10.359 1.00 3.60 ATOM 16 C VAL 3 7.470 37.349 9.293 1.00 3.60 ATOM 17 O VAL 3 8.052 36.297 9.033 1.00 3.60 ATOM 18 CB VAL 3 9.036 39.278 9.728 1.00 3.00 ATOM 19 CG1 VAL 3 9.034 40.611 10.477 1.00 3.00 ATOM 20 CG2 VAL 3 10.466 38.742 9.623 1.00 3.00 ATOM 21 N GLN 4 6.339 37.724 8.688 1.00 4.50 ATOM 22 CA GLN 4 5.555 36.851 7.808 1.00 4.50 ATOM 23 C GLN 4 6.286 36.454 6.506 1.00 4.50 ATOM 24 O GLN 4 6.597 35.279 6.304 1.00 4.50 ATOM 25 CB GLN 4 4.199 37.534 7.557 1.00 6.00 ATOM 26 CG GLN 4 3.305 36.895 6.486 1.00 6.00 ATOM 27 CD GLN 4 2.731 35.515 6.817 1.00 6.00 ATOM 28 OE1 GLN 4 3.433 34.566 7.132 1.00 6.00 ATOM 29 NE2 GLN 4 1.430 35.336 6.697 1.00 6.00 ATOM 30 N GLY 5 6.533 37.412 5.599 1.00 4.60 ATOM 31 CA GLY 5 7.058 37.123 4.255 1.00 4.60 ATOM 32 C GLY 5 6.843 38.241 3.223 1.00 4.60 ATOM 33 O GLY 5 6.383 39.328 3.582 1.00 4.60 ATOM 34 N PRO 6 7.171 37.994 1.940 1.00 4.10 ATOM 35 CA PRO 6 7.102 38.988 0.869 1.00 4.10 ATOM 36 C PRO 6 5.649 39.249 0.430 1.00 4.10 ATOM 37 O PRO 6 4.991 38.399 -0.176 1.00 4.10 ATOM 38 CB PRO 6 7.961 38.405 -0.258 1.00 3.80 ATOM 39 CG PRO 6 7.799 36.894 -0.093 1.00 3.80 ATOM 40 CD PRO 6 7.667 36.723 1.420 1.00 3.80 ATOM 41 N TRP 7 5.137 40.441 0.734 1.00 5.50 ATOM 42 CA TRP 7 3.813 40.901 0.296 1.00 5.50 ATOM 43 C TRP 7 3.812 41.221 -1.219 1.00 5.50 ATOM 44 O TRP 7 4.810 41.695 -1.756 1.00 5.50 ATOM 45 CB TRP 7 3.410 42.107 1.164 1.00 6.70 ATOM 46 CG TRP 7 3.095 41.866 2.619 1.00 6.70 ATOM 47 CD1 TRP 7 3.362 40.745 3.328 1.00 6.70 ATOM 48 CD2 TRP 7 2.493 42.791 3.585 1.00 6.70 ATOM 49 NE1 TRP 7 2.899 40.877 4.622 1.00 6.70 ATOM 50 CE2 TRP 7 2.324 42.109 4.828 1.00 6.70 ATOM 51 CE3 TRP 7 2.063 44.136 3.537 1.00 6.70 ATOM 52 CZ2 TRP 7 1.701 42.695 5.940 1.00 6.70 ATOM 53 CZ3 TRP 7 1.464 44.746 4.658 1.00 6.70 ATOM 54 CH2 TRP 7 1.256 44.023 5.846 1.00 6.70 ATOM 55 N VAL 8 2.709 40.968 -1.939 1.00 7.10 ATOM 56 CA VAL 8 2.563 41.297 -3.379 1.00 7.10 ATOM 57 C VAL 8 1.079 41.519 -3.746 1.00 7.10 ATOM 58 O VAL 8 0.205 41.112 -2.988 1.00 7.10 ATOM 59 CB VAL 8 3.332 40.274 -4.257 1.00 6.90 ATOM 60 CG1 VAL 8 2.800 38.844 -4.189 1.00 6.90 ATOM 61 CG2 VAL 8 3.402 40.666 -5.735 1.00 6.90 ATOM 62 N GLY 9 0.780 42.174 -4.876 1.00 9.10 ATOM 63 CA GLY 9 -0.549 42.700 -5.252 1.00 9.10 ATOM 64 C GLY 9 -1.803 41.886 -4.869 1.00 9.10 ATOM 65 O GLY 9 -1.888 40.677 -5.098 1.00 9.10 ATOM 66 N SER 10 -2.796 42.606 -4.327 1.00 9.50 ATOM 67 CA SER 10 -4.157 42.173 -3.953 1.00 9.50 ATOM 68 C SER 10 -4.246 40.870 -3.135 1.00 9.50 ATOM 69 O SER 10 -4.024 40.891 -1.922 1.00 9.50 ATOM 70 CB SER 10 -5.125 42.240 -5.151 1.00 10.20 ATOM 71 OG SER 10 -4.833 41.288 -6.166 1.00 10.20 ATOM 72 N SER 11 -4.606 39.741 -3.752 1.00 8.70 ATOM 73 CA SER 11 -4.910 38.474 -3.069 1.00 8.70 ATOM 74 C SER 11 -3.742 37.951 -2.229 1.00 8.70 ATOM 75 O SER 11 -3.962 37.466 -1.119 1.00 8.70 ATOM 76 CB SER 11 -5.328 37.413 -4.094 1.00 9.10 ATOM 77 OG SER 11 -4.309 37.201 -5.064 1.00 9.10 ATOM 78 N TYR 12 -2.500 38.103 -2.697 1.00 6.80 ATOM 79 CA TYR 12 -1.311 37.700 -1.948 1.00 6.80 ATOM 80 C TYR 12 -1.114 38.580 -0.705 1.00 6.80 ATOM 81 O TYR 12 -1.067 38.058 0.400 1.00 6.80 ATOM 82 CB TYR 12 -0.077 37.723 -2.852 1.00 6.90 ATOM 83 CG TYR 12 -0.044 36.698 -3.974 1.00 6.90 ATOM 84 CD1 TYR 12 -0.737 36.938 -5.178 1.00 6.90 ATOM 85 CD2 TYR 12 0.745 35.538 -3.841 1.00 6.90 ATOM 86 CE1 TYR 12 -0.652 36.019 -6.242 1.00 6.90 ATOM 87 CE2 TYR 12 0.840 34.620 -4.907 1.00 6.90 ATOM 88 CZ TYR 12 0.143 34.859 -6.112 1.00 6.90 ATOM 89 OH TYR 12 0.252 33.973 -7.142 1.00 6.90 ATOM 90 N VAL 13 -1.070 39.910 -0.816 1.00 6.20 ATOM 91 CA VAL 13 -0.925 40.821 0.341 1.00 6.20 ATOM 92 C VAL 13 -2.130 40.799 1.303 1.00 6.20 ATOM 93 O VAL 13 -1.990 41.226 2.444 1.00 6.20 ATOM 94 CB VAL 13 -0.538 42.242 -0.128 1.00 6.60 ATOM 95 CG1 VAL 13 -1.616 42.917 -0.975 1.00 6.60 ATOM 96 CG2 VAL 13 -0.178 43.179 1.022 1.00 6.60 ATOM 97 N ALA 14 -3.274 40.224 0.914 1.00 6.40 ATOM 98 CA ALA 14 -4.416 39.953 1.800 1.00 6.40 ATOM 99 C ALA 14 -4.508 38.495 2.333 1.00 6.40 ATOM 100 O ALA 14 -5.420 38.181 3.104 1.00 6.40 ATOM 101 CB ALA 14 -5.688 40.407 1.076 1.00 6.80 ATOM 102 N GLU 15 -3.581 37.603 1.954 1.00 5.00 ATOM 103 CA GLU 15 -3.432 36.230 2.494 1.00 5.00 ATOM 104 C GLU 15 -2.080 36.010 3.202 1.00 5.00 ATOM 105 O GLU 15 -1.960 35.169 4.096 1.00 5.00 ATOM 106 CB GLU 15 -3.621 35.190 1.381 1.00 5.80 ATOM 107 CG GLU 15 -5.085 35.090 0.925 1.00 5.80 ATOM 108 CD GLU 15 -5.280 34.134 -0.270 1.00 5.80 ATOM 109 OE1 GLU 15 -4.504 33.158 -0.433 1.00 5.80 ATOM 110 OE2 GLU 15 -6.248 34.325 -1.047 1.00 5.80 ATOM 111 N THR 16 -1.065 36.779 2.816 1.00 3.90 ATOM 112 CA THR 16 0.220 36.940 3.499 1.00 3.90 ATOM 113 C THR 16 0.010 38.012 4.575 1.00 3.90 ATOM 114 O THR 16 0.091 37.704 5.761 1.00 3.90 ATOM 115 CB THR 16 1.331 37.283 2.484 1.00 4.10 ATOM 116 OG1 THR 16 1.394 36.283 1.486 1.00 4.10 ATOM 117 CG2 THR 16 2.720 37.335 3.108 1.00 4.10 ATOM 118 N GLY 17 -0.356 39.240 4.183 1.00 4.30 ATOM 119 CA GLY 17 -0.853 40.288 5.089 1.00 4.30 ATOM 120 C GLY 17 -2.335 40.067 5.449 1.00 4.30 ATOM 121 O GLY 17 -2.999 39.213 4.865 1.00 4.30 ATOM 122 N GLN 18 -2.840 40.805 6.446 1.00 4.70 ATOM 123 CA GLN 18 -4.133 40.639 7.157 1.00 4.70 ATOM 124 C GLN 18 -4.364 39.249 7.780 1.00 4.70 ATOM 125 O GLN 18 -4.522 39.152 8.991 1.00 4.70 ATOM 126 CB GLN 18 -5.363 41.101 6.348 1.00 6.10 ATOM 127 CG GLN 18 -6.584 41.174 7.293 1.00 6.10 ATOM 128 CD GLN 18 -7.846 41.793 6.697 1.00 6.10 ATOM 129 OE1 GLN 18 -8.043 41.886 5.492 1.00 6.10 ATOM 130 NE2 GLN 18 -8.770 42.215 7.539 1.00 6.10 ATOM 131 N ASN 19 -4.348 38.168 6.999 1.00 3.30 ATOM 132 CA ASN 19 -4.468 36.782 7.469 1.00 3.30 ATOM 133 C ASN 19 -3.380 36.415 8.499 1.00 3.30 ATOM 134 O ASN 19 -3.619 35.609 9.397 1.00 3.30 ATOM 135 CB ASN 19 -4.410 35.895 6.222 1.00 3.50 ATOM 136 CG ASN 19 -4.480 34.402 6.512 1.00 3.50 ATOM 137 OD1 ASN 19 -5.315 33.920 7.264 1.00 3.50 ATOM 138 ND2 ASN 19 -3.612 33.624 5.907 1.00 3.50 ATOM 139 N TRP 20 -2.209 37.067 8.446 1.00 2.40 ATOM 140 CA TRP 20 -1.200 36.976 9.509 1.00 2.40 ATOM 141 C TRP 20 -1.748 37.379 10.888 1.00 2.40 ATOM 142 O TRP 20 -1.392 36.756 11.881 1.00 2.40 ATOM 143 CB TRP 20 0.007 37.844 9.154 1.00 2.80 ATOM 144 CG TRP 20 1.042 37.893 10.230 1.00 2.80 ATOM 145 CD1 TRP 20 1.152 38.874 11.151 1.00 2.80 ATOM 146 CD2 TRP 20 2.047 36.895 10.592 1.00 2.80 ATOM 147 NE1 TRP 20 2.195 38.587 12.002 1.00 2.80 ATOM 148 CE2 TRP 20 2.848 37.430 11.641 1.00 2.80 ATOM 149 CE3 TRP 20 2.374 35.600 10.140 1.00 2.80 ATOM 150 CZ2 TRP 20 3.985 36.773 12.131 1.00 2.80 ATOM 151 CZ3 TRP 20 3.490 34.909 10.652 1.00 2.80 ATOM 152 CH2 TRP 20 4.310 35.501 11.630 1.00 2.80 ATOM 153 N ALA 21 -2.654 38.359 10.971 1.00 3.70 ATOM 154 CA ALA 21 -3.298 38.734 12.232 1.00 3.70 ATOM 155 C ALA 21 -4.144 37.589 12.823 1.00 3.70 ATOM 156 O ALA 21 -4.249 37.493 14.042 1.00 3.70 ATOM 157 CB ALA 21 -4.122 40.014 12.039 1.00 4.00 ATOM 158 N SER 22 -4.692 36.686 11.998 1.00 3.70 ATOM 159 CA SER 22 -5.320 35.438 12.467 1.00 3.70 ATOM 160 C SER 22 -4.273 34.381 12.845 1.00 3.70 ATOM 161 O SER 22 -4.342 33.804 13.931 1.00 3.70 ATOM 162 CB SER 22 -6.275 34.862 11.409 1.00 3.90 ATOM 163 OG SER 22 -7.292 35.801 11.084 1.00 3.90 ATOM 164 N LEU 23 -3.275 34.150 11.980 1.00 3.10 ATOM 165 CA LEU 23 -2.236 33.122 12.165 1.00 3.10 ATOM 166 C LEU 23 -1.372 33.370 13.414 1.00 3.10 ATOM 167 O LEU 23 -1.220 32.480 14.250 1.00 3.10 ATOM 168 CB LEU 23 -1.342 33.060 10.911 1.00 3.20 ATOM 169 CG LEU 23 -2.028 32.497 9.653 1.00 3.20 ATOM 170 CD1 LEU 23 -1.203 32.852 8.415 1.00 3.20 ATOM 171 CD2 LEU 23 -2.156 30.974 9.722 1.00 3.20 ATOM 172 N ALA 24 -0.831 34.580 13.565 1.00 3.50 ATOM 173 CA ALA 24 0.008 34.953 14.699 1.00 3.50 ATOM 174 C ALA 24 -0.792 35.218 15.987 1.00 3.50 ATOM 175 O ALA 24 -0.243 35.005 17.062 1.00 3.50 ATOM 176 CB ALA 24 0.911 36.121 14.294 1.00 3.50 ATOM 177 N ALA 25 -2.087 35.568 15.941 1.00 4.90 ATOM 178 CA ALA 25 -2.912 35.628 17.160 1.00 4.90 ATOM 179 C ALA 25 -3.109 34.248 17.824 1.00 4.90 ATOM 180 O ALA 25 -3.278 34.179 19.045 1.00 4.90 ATOM 181 CB ALA 25 -4.260 36.286 16.855 1.00 4.90 ATOM 182 N ASN 26 -3.031 33.151 17.057 1.00 5.30 ATOM 183 CA ASN 26 -2.976 31.789 17.609 1.00 5.30 ATOM 184 C ASN 26 -1.633 31.493 18.323 1.00 5.30 ATOM 185 O ASN 26 -1.557 30.564 19.128 1.00 5.30 ATOM 186 CB ASN 26 -3.239 30.756 16.496 1.00 5.40 ATOM 187 CG ASN 26 -4.580 30.912 15.788 1.00 5.40 ATOM 188 OD1 ASN 26 -5.584 31.321 16.359 1.00 5.40 ATOM 189 ND2 ASN 26 -4.647 30.559 14.523 1.00 5.40 ATOM 190 N GLU 27 -0.583 32.278 18.044 1.00 5.20 ATOM 191 CA GLU 27 0.710 32.248 18.735 1.00 5.20 ATOM 192 C GLU 27 0.770 33.305 19.858 1.00 5.20 ATOM 193 O GLU 27 0.520 32.990 21.024 1.00 5.20 ATOM 194 CB GLU 27 1.881 32.415 17.742 1.00 5.40 ATOM 195 CG GLU 27 1.941 31.319 16.668 1.00 5.40 ATOM 196 CD GLU 27 3.212 31.389 15.791 1.00 5.40 ATOM 197 OE1 GLU 27 4.030 32.333 15.917 1.00 5.40 ATOM 198 OE2 GLU 27 3.405 30.473 14.952 1.00 5.40 ATOM 199 N LEU 28 1.114 34.549 19.503 1.00 5.40 ATOM 200 CA LEU 28 1.415 35.694 20.368 1.00 5.40 ATOM 201 C LEU 28 0.894 36.964 19.650 1.00 5.40 ATOM 202 O LEU 28 1.230 37.213 18.488 1.00 5.40 ATOM 203 CB LEU 28 2.930 35.717 20.681 1.00 5.60 ATOM 204 CG LEU 28 3.504 34.437 21.331 1.00 5.60 ATOM 205 CD1 LEU 28 5.028 34.465 21.330 1.00 5.60 ATOM 206 CD2 LEU 28 3.051 34.285 22.786 1.00 5.60 ATOM 207 N ARG 29 0.044 37.744 20.338 1.00 5.20 ATOM 208 CA ARG 29 -0.830 38.795 19.768 1.00 5.20 ATOM 209 C ARG 29 -0.222 39.850 18.830 1.00 5.20 ATOM 210 O ARG 29 0.920 40.290 18.955 1.00 5.20 ATOM 211 CB ARG 29 -1.627 39.496 20.880 1.00 6.70 ATOM 212 CG ARG 29 -2.840 38.683 21.370 1.00 6.70 ATOM 213 CD ARG 29 -3.600 39.418 22.486 1.00 6.70 ATOM 214 NE ARG 29 -3.872 40.823 22.121 1.00 6.70 ATOM 215 CZ ARG 29 -4.908 41.341 21.499 1.00 6.70 ATOM 216 NH1 ARG 29 -4.810 42.574 21.102 1.00 6.70 ATOM 217 NH2 ARG 29 -6.001 40.678 21.247 1.00 6.70 ATOM 218 N VAL 30 -1.100 40.301 17.931 1.00 4.00 ATOM 219 CA VAL 30 -0.884 41.150 16.750 1.00 4.00 ATOM 220 C VAL 30 -2.184 41.927 16.456 1.00 4.00 ATOM 221 O VAL 30 -3.268 41.349 16.559 1.00 4.00 ATOM 222 CB VAL 30 -0.446 40.251 15.566 1.00 4.10 ATOM 223 CG1 VAL 30 -1.289 38.975 15.407 1.00 4.10 ATOM 224 CG2 VAL 30 -0.449 40.974 14.220 1.00 4.10 ATOM 225 N THR 31 -2.111 43.223 16.119 1.00 3.20 ATOM 226 CA THR 31 -3.298 44.111 15.975 1.00 3.20 ATOM 227 C THR 31 -3.373 44.835 14.621 1.00 3.20 ATOM 228 O THR 31 -2.435 44.794 13.829 1.00 3.20 ATOM 229 CB THR 31 -3.409 45.123 17.138 1.00 3.70 ATOM 230 OG1 THR 31 -2.523 46.209 16.970 1.00 3.70 ATOM 231 CG2 THR 31 -3.133 44.516 18.513 1.00 3.70 ATOM 232 N GLU 32 -4.498 45.503 14.341 1.00 3.60 ATOM 233 CA GLU 32 -4.743 46.299 13.120 1.00 3.60 ATOM 234 C GLU 32 -4.631 47.821 13.365 1.00 3.60 ATOM 235 O GLU 32 -4.845 48.288 14.487 1.00 3.60 ATOM 236 CB GLU 32 -6.132 45.954 12.552 1.00 4.40 ATOM 237 CG GLU 32 -6.225 44.508 12.034 1.00 4.40 ATOM 238 CD GLU 32 -7.636 44.116 11.533 1.00 4.40 ATOM 239 OE1 GLU 32 -8.607 44.901 11.677 1.00 4.40 ATOM 240 OE2 GLU 32 -7.785 42.994 10.988 1.00 4.40 ATOM 241 N ARG 33 -4.342 48.605 12.307 1.00 5.10 ATOM 242 CA ARG 33 -4.332 50.089 12.315 1.00 5.10 ATOM 243 C ARG 33 -5.011 50.660 11.045 1.00 5.10 ATOM 244 O ARG 33 -4.737 50.137 9.965 1.00 5.10 ATOM 245 CB ARG 33 -2.888 50.617 12.489 1.00 6.30 ATOM 246 CG ARG 33 -2.239 50.330 13.855 1.00 6.30 ATOM 247 CD ARG 33 -2.928 51.071 15.009 1.00 6.30 ATOM 248 NE ARG 33 -2.343 50.706 16.314 1.00 6.30 ATOM 249 CZ ARG 33 -2.743 51.156 17.493 1.00 6.30 ATOM 250 NH1 ARG 33 -2.182 50.732 18.589 1.00 6.30 ATOM 251 NH2 ARG 33 -3.709 52.024 17.617 1.00 6.30 ATOM 252 N PRO 34 -5.833 51.734 11.131 1.00 6.50 ATOM 253 CA PRO 34 -6.717 52.198 10.042 1.00 6.50 ATOM 254 C PRO 34 -6.100 52.428 8.652 1.00 6.50 ATOM 255 O PRO 34 -6.640 51.932 7.663 1.00 6.50 ATOM 256 CB PRO 34 -7.369 53.481 10.567 1.00 6.80 ATOM 257 CG PRO 34 -7.487 53.203 12.059 1.00 6.80 ATOM 258 CD PRO 34 -6.199 52.441 12.361 1.00 6.80 ATOM 259 N PHE 35 -4.982 53.160 8.550 1.00 7.50 ATOM 260 CA PHE 35 -4.307 53.394 7.258 1.00 7.50 ATOM 261 C PHE 35 -3.242 52.340 6.920 1.00 7.50 ATOM 262 O PHE 35 -2.909 52.163 5.747 1.00 7.50 ATOM 263 CB PHE 35 -3.745 54.819 7.207 1.00 8.70 ATOM 264 CG PHE 35 -4.798 55.883 6.945 1.00 8.70 ATOM 265 CD1 PHE 35 -5.159 56.808 7.943 1.00 8.70 ATOM 266 CD2 PHE 35 -5.416 55.950 5.680 1.00 8.70 ATOM 267 CE1 PHE 35 -6.136 57.788 7.679 1.00 8.70 ATOM 268 CE2 PHE 35 -6.392 56.927 5.417 1.00 8.70 ATOM 269 CZ PHE 35 -6.754 57.846 6.417 1.00 8.70 ATOM 270 N TRP 36 -2.754 51.589 7.916 1.00 5.40 ATOM 271 CA TRP 36 -1.869 50.437 7.703 1.00 5.40 ATOM 272 C TRP 36 -2.579 49.396 6.827 1.00 5.40 ATOM 273 O TRP 36 -2.025 48.956 5.822 1.00 5.40 ATOM 274 CB TRP 36 -1.451 49.853 9.066 1.00 5.60 ATOM 275 CG TRP 36 -0.214 49.002 9.124 1.00 5.60 ATOM 276 CD1 TRP 36 0.048 47.912 8.368 1.00 5.60 ATOM 277 CD2 TRP 36 0.949 49.158 10.001 1.00 5.60 ATOM 278 NE1 TRP 36 1.277 47.384 8.715 1.00 5.60 ATOM 279 CE2 TRP 36 1.890 48.126 9.700 1.00 5.60 ATOM 280 CE3 TRP 36 1.331 50.098 10.986 1.00 5.60 ATOM 281 CZ2 TRP 36 3.152 48.053 10.309 1.00 5.60 ATOM 282 CZ3 TRP 36 2.595 50.031 11.609 1.00 5.60 ATOM 283 CH2 TRP 36 3.510 49.020 11.264 1.00 5.60 ATOM 284 N ILE 37 -3.832 49.061 7.163 1.00 4.80 ATOM 285 CA ILE 37 -4.626 48.058 6.436 1.00 4.80 ATOM 286 C ILE 37 -5.054 48.509 5.028 1.00 4.80 ATOM 287 O ILE 37 -4.835 47.781 4.059 1.00 4.80 ATOM 288 CB ILE 37 -5.795 47.547 7.311 1.00 4.90 ATOM 289 CG1 ILE 37 -6.506 46.384 6.596 1.00 4.90 ATOM 290 CG2 ILE 37 -6.820 48.630 7.689 1.00 4.90 ATOM 291 CD1 ILE 37 -7.391 45.538 7.516 1.00 4.90 ATOM 292 N SER 38 -5.633 49.707 4.875 1.00 7.00 ATOM 293 CA SER 38 -6.159 50.157 3.575 1.00 7.00 ATOM 294 C SER 38 -5.055 50.395 2.539 1.00 7.00 ATOM 295 O SER 38 -5.271 50.129 1.352 1.00 7.00 ATOM 296 CB SER 38 -7.022 51.414 3.732 1.00 7.40 ATOM 297 OG SER 38 -6.252 52.517 4.180 1.00 7.40 ATOM 298 N SER 39 -3.857 50.823 2.966 1.00 6.90 ATOM 299 CA SER 39 -2.715 50.987 2.060 1.00 6.90 ATOM 300 C SER 39 -2.301 49.647 1.439 1.00 6.90 ATOM 301 O SER 39 -2.288 49.541 0.213 1.00 6.90 ATOM 302 CB SER 39 -1.536 51.710 2.733 1.00 6.80 ATOM 303 OG SER 39 -0.902 50.928 3.727 1.00 6.80 ATOM 304 N PHE 40 -2.057 48.596 2.232 1.00 5.40 ATOM 305 CA PHE 40 -1.625 47.308 1.676 1.00 5.40 ATOM 306 C PHE 40 -2.726 46.590 0.878 1.00 5.40 ATOM 307 O PHE 40 -2.420 45.938 -0.119 1.00 5.40 ATOM 308 CB PHE 40 -0.965 46.430 2.752 1.00 4.50 ATOM 309 CG PHE 40 -1.828 45.710 3.785 1.00 4.50 ATOM 310 CD1 PHE 40 -2.711 44.673 3.420 1.00 4.50 ATOM 311 CD2 PHE 40 -1.631 45.980 5.152 1.00 4.50 ATOM 312 CE1 PHE 40 -3.409 43.948 4.402 1.00 4.50 ATOM 313 CE2 PHE 40 -2.322 45.255 6.138 1.00 4.50 ATOM 314 CZ PHE 40 -3.222 44.246 5.763 1.00 4.50 ATOM 315 N ILE 41 -4.004 46.733 1.257 1.00 6.60 ATOM 316 CA ILE 41 -5.129 46.137 0.516 1.00 6.60 ATOM 317 C ILE 41 -5.325 46.800 -0.861 1.00 6.60 ATOM 318 O ILE 41 -5.576 46.100 -1.847 1.00 6.60 ATOM 319 CB ILE 41 -6.413 46.166 1.387 1.00 6.60 ATOM 320 CG1 ILE 41 -6.256 45.128 2.524 1.00 6.60 ATOM 321 CG2 ILE 41 -7.695 45.896 0.576 1.00 6.60 ATOM 322 CD1 ILE 41 -7.453 45.018 3.474 1.00 6.60 ATOM 323 N GLY 42 -5.215 48.132 -0.949 1.00 8.30 ATOM 324 CA GLY 42 -5.543 48.888 -2.167 1.00 8.30 ATOM 325 C GLY 42 -4.416 49.010 -3.205 1.00 8.30 ATOM 326 O GLY 42 -4.701 49.176 -4.395 1.00 8.30 ATOM 327 N ARG 43 -3.148 48.968 -2.772 1.00 8.20 ATOM 328 CA ARG 43 -1.956 49.201 -3.617 1.00 8.20 ATOM 329 C ARG 43 -1.432 47.894 -4.250 1.00 8.20 ATOM 330 O ARG 43 -2.048 46.834 -4.096 1.00 8.20 ATOM 331 CB ARG 43 -0.902 49.973 -2.792 1.00 8.40 ATOM 332 CG ARG 43 -1.134 51.501 -2.760 1.00 8.40 ATOM 333 CD ARG 43 -2.423 51.945 -2.047 1.00 8.40 ATOM 334 NE ARG 43 -2.710 53.389 -2.195 1.00 8.40 ATOM 335 CZ ARG 43 -3.823 53.997 -1.814 1.00 8.40 ATOM 336 NH1 ARG 43 -4.025 55.253 -2.091 1.00 8.40 ATOM 337 NH2 ARG 43 -4.765 53.377 -1.156 1.00 8.40 ATOM 338 N SER 44 -0.354 47.980 -5.039 1.00 9.70 ATOM 339 CA SER 44 0.185 46.851 -5.812 1.00 9.70 ATOM 340 C SER 44 1.707 46.708 -5.691 1.00 9.70 ATOM 341 O SER 44 2.439 47.666 -5.951 1.00 9.70 ATOM 342 CB SER 44 -0.228 46.974 -7.283 1.00 10.20 ATOM 343 OG SER 44 0.151 45.799 -7.983 1.00 10.20 ATOM 344 N LYS 45 2.148 45.481 -5.362 1.00 8.20 ATOM 345 CA LYS 45 3.535 45.043 -5.079 1.00 8.20 ATOM 346 C LYS 45 4.090 45.675 -3.781 1.00 8.20 ATOM 347 O LYS 45 3.874 46.853 -3.497 1.00 8.20 ATOM 348 CB LYS 45 4.425 45.179 -6.334 1.00 7.60 ATOM 349 CG LYS 45 3.933 44.268 -7.483 1.00 7.60 ATOM 350 CD LYS 45 4.442 44.686 -8.871 1.00 7.60 ATOM 351 CE LYS 45 3.796 43.851 -9.995 1.00 7.60 ATOM 352 NZ LYS 45 4.238 42.423 -9.996 1.00 7.60 TER END