####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS288_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 19 - 38 4.98 19.25 LCS_AVERAGE: 43.18 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 35 - 45 1.83 22.62 LCS_AVERAGE: 19.78 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.45 15.96 LONGEST_CONTINUOUS_SEGMENT: 9 37 - 45 0.94 22.76 LCS_AVERAGE: 15.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 17 0 3 4 4 4 4 6 8 9 10 12 15 17 19 23 25 26 26 29 30 LCS_GDT V 3 V 3 3 5 17 0 3 4 4 4 6 7 8 9 10 12 12 16 19 23 25 26 26 28 29 LCS_GDT Q 4 Q 4 4 5 17 0 3 4 4 4 6 7 8 9 10 12 12 16 18 22 25 26 26 28 30 LCS_GDT G 5 G 5 4 5 19 0 3 4 4 4 6 7 8 9 10 14 15 19 20 23 25 26 28 29 31 LCS_GDT P 6 P 6 4 5 19 1 3 4 5 5 6 7 9 13 14 15 17 19 21 23 25 27 28 29 31 LCS_GDT W 7 W 7 4 5 19 0 3 4 5 5 6 7 10 13 14 15 17 20 22 24 25 27 28 29 31 LCS_GDT V 8 V 8 3 10 19 3 3 4 5 5 5 9 10 11 12 14 16 19 20 23 25 26 28 29 31 LCS_GDT G 9 G 9 9 10 19 3 9 9 9 9 9 9 10 11 12 13 14 16 20 23 25 26 28 29 31 LCS_GDT S 10 S 10 9 10 19 7 9 9 9 9 9 9 11 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT S 11 S 11 9 10 19 7 9 9 9 9 9 9 10 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT Y 12 Y 12 9 10 19 7 9 9 9 9 9 9 11 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT V 13 V 13 9 10 19 7 9 9 9 9 9 10 11 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT A 14 A 14 9 10 19 7 9 9 9 9 9 10 11 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT E 15 E 15 9 10 19 7 9 9 9 9 9 11 11 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT T 16 T 16 9 10 19 7 9 9 9 9 9 11 11 12 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT G 17 G 17 9 10 19 6 9 9 9 9 9 11 11 12 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT Q 18 Q 18 4 4 19 3 3 4 6 6 9 11 11 13 14 15 19 20 22 24 25 27 28 29 31 LCS_GDT N 19 N 19 4 10 20 3 3 4 4 7 8 10 11 11 14 17 18 19 22 24 25 27 28 29 31 LCS_GDT W 20 W 20 8 10 20 6 7 8 9 9 9 10 11 11 14 17 18 19 22 24 25 27 28 29 31 LCS_GDT A 21 A 21 8 10 20 6 7 8 9 9 9 11 11 13 14 17 19 20 22 24 25 27 28 29 31 LCS_GDT S 22 S 22 8 10 20 6 7 8 9 9 9 11 11 13 14 17 19 20 22 24 25 27 28 29 31 LCS_GDT L 23 L 23 8 10 20 6 7 8 9 9 9 11 11 13 14 17 19 20 22 24 25 27 28 29 31 LCS_GDT A 24 A 24 8 10 20 6 7 8 9 9 9 10 11 11 14 17 19 20 22 24 25 27 28 29 31 LCS_GDT A 25 A 25 8 10 20 6 7 8 9 9 9 10 11 11 14 17 18 19 22 24 25 27 28 29 31 LCS_GDT N 26 N 26 8 10 20 3 7 8 9 9 9 10 11 11 14 17 19 19 22 24 25 27 28 29 31 LCS_GDT E 27 E 27 8 10 20 3 4 8 9 9 9 10 11 11 14 17 18 19 20 22 23 26 28 29 31 LCS_GDT L 28 L 28 3 10 20 0 3 6 9 9 9 10 11 11 14 17 18 19 20 21 23 24 27 28 30 LCS_GDT R 29 R 29 3 4 20 3 3 3 4 4 6 9 11 11 14 17 18 19 20 21 23 25 28 29 29 LCS_GDT V 30 V 30 4 5 20 3 4 4 5 5 5 5 7 8 12 14 18 19 20 21 23 25 28 29 29 LCS_GDT T 31 T 31 4 5 20 3 4 4 5 5 8 12 12 15 15 17 18 19 21 23 25 26 28 29 31 LCS_GDT E 32 E 32 4 5 20 3 4 6 7 9 10 12 12 15 15 17 18 20 22 24 25 27 28 29 31 LCS_GDT R 33 R 33 4 5 20 3 4 4 6 6 11 12 12 15 15 15 19 20 22 24 25 27 28 29 31 LCS_GDT P 34 P 34 4 5 20 3 3 4 5 6 9 11 12 15 15 15 19 20 22 24 25 27 27 29 31 LCS_GDT F 35 F 35 3 11 20 3 3 3 4 7 11 11 12 15 15 17 19 20 22 24 25 27 28 29 31 LCS_GDT W 36 W 36 6 11 20 3 4 6 6 10 10 11 11 15 15 17 19 20 22 24 25 27 28 29 31 LCS_GDT I 37 I 37 9 11 20 3 6 9 9 10 11 12 12 15 15 17 18 19 20 22 23 26 28 29 31 LCS_GDT S 38 S 38 9 11 20 4 6 9 9 10 11 12 12 15 15 17 18 19 20 22 24 26 28 29 31 LCS_GDT S 39 S 39 9 11 17 4 6 9 9 10 11 12 12 15 15 16 19 20 22 24 25 27 28 29 31 LCS_GDT F 40 F 40 9 11 17 4 6 9 9 10 11 12 12 15 15 15 16 18 20 22 24 26 28 29 31 LCS_GDT I 41 I 41 9 11 17 4 6 9 9 10 11 12 12 15 15 15 16 19 20 22 24 26 28 29 31 LCS_GDT G 42 G 42 9 11 17 3 3 9 9 10 11 12 12 15 15 15 16 18 21 22 24 27 28 29 31 LCS_GDT R 43 R 43 9 11 17 3 6 9 9 10 11 12 12 15 15 15 16 18 21 23 25 27 28 29 31 LCS_GDT S 44 S 44 9 11 17 3 6 9 9 10 11 12 12 15 15 15 15 15 15 15 16 17 17 17 29 LCS_GDT K 45 K 45 9 11 17 3 6 9 9 10 11 12 12 15 15 15 15 15 15 15 16 17 17 17 17 LCS_AVERAGE LCS_A: 26.05 ( 15.19 19.78 43.18 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 9 9 10 11 12 12 15 15 17 19 20 22 24 25 27 28 29 31 GDT PERCENT_AT 15.91 20.45 20.45 20.45 22.73 25.00 27.27 27.27 34.09 34.09 38.64 43.18 45.45 50.00 54.55 56.82 61.36 63.64 65.91 70.45 GDT RMS_LOCAL 0.27 0.45 0.45 0.45 1.38 1.91 2.27 2.18 3.00 3.00 4.16 4.32 4.62 4.87 5.19 5.44 5.86 6.38 6.22 6.64 GDT RMS_ALL_AT 16.22 15.96 15.96 15.96 22.92 22.63 22.90 22.62 22.60 22.60 18.51 11.26 10.58 10.66 10.53 10.23 9.83 10.03 9.87 9.65 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 25.584 0 0.084 0.105 29.274 0.000 0.000 - LGA V 3 V 3 27.897 0 0.074 1.288 28.825 0.000 0.000 26.466 LGA Q 4 Q 4 32.217 0 0.587 1.475 35.421 0.000 0.000 33.104 LGA G 5 G 5 35.194 0 0.429 0.429 36.258 0.000 0.000 - LGA P 6 P 6 38.358 0 0.702 0.621 42.472 0.000 0.000 42.472 LGA W 7 W 7 37.499 0 0.437 1.279 38.654 0.000 0.000 38.654 LGA V 8 V 8 34.928 0 0.640 1.414 35.783 0.000 0.000 35.076 LGA G 9 G 9 35.729 0 0.550 0.550 35.729 0.000 0.000 - LGA S 10 S 10 38.139 0 0.050 0.582 41.428 0.000 0.000 41.428 LGA S 11 S 11 33.297 0 0.045 0.691 35.029 0.000 0.000 32.872 LGA Y 12 Y 12 28.082 0 0.040 1.497 30.107 0.000 0.000 29.709 LGA V 13 V 13 32.482 0 0.015 0.136 36.179 0.000 0.000 36.179 LGA A 14 A 14 34.793 0 0.070 0.068 36.212 0.000 0.000 - LGA E 15 E 15 28.301 0 0.153 1.051 30.346 0.000 0.000 25.851 LGA T 16 T 16 25.193 0 0.133 1.096 26.976 0.000 0.000 23.912 LGA G 17 G 17 31.077 0 0.083 0.083 32.532 0.000 0.000 - LGA Q 18 Q 18 30.344 0 0.624 1.422 33.449 0.000 0.000 33.146 LGA N 19 N 19 28.160 0 0.164 1.050 32.917 0.000 0.000 32.917 LGA W 20 W 20 22.533 0 0.601 0.707 27.659 0.000 0.000 25.487 LGA A 21 A 21 19.969 0 0.121 0.131 21.096 0.000 0.000 - LGA S 22 S 22 18.927 0 0.049 0.621 22.636 0.000 0.000 22.636 LGA L 23 L 23 19.722 0 0.020 1.389 22.901 0.000 0.000 22.901 LGA A 24 A 24 16.717 0 0.067 0.072 17.725 0.000 0.000 - LGA A 25 A 25 16.030 0 0.093 0.090 17.202 0.000 0.000 - LGA N 26 N 26 18.446 0 0.037 0.104 20.575 0.000 0.000 18.733 LGA E 27 E 27 19.175 0 0.671 1.209 25.021 0.000 0.000 22.213 LGA L 28 L 28 16.341 0 0.626 0.520 18.523 0.000 0.000 18.523 LGA R 29 R 29 14.316 0 0.657 1.370 21.187 0.000 0.000 19.878 LGA V 30 V 30 12.170 0 0.640 0.541 16.133 0.000 0.000 13.961 LGA T 31 T 31 7.587 0 0.164 1.236 10.709 0.000 0.000 10.371 LGA E 32 E 32 6.721 0 0.090 1.305 14.284 4.091 1.818 14.284 LGA R 33 R 33 2.826 0 0.108 1.404 8.083 8.636 7.273 8.083 LGA P 34 P 34 3.721 0 0.555 0.562 4.849 8.636 12.727 3.275 LGA F 35 F 35 2.877 0 0.656 1.143 11.685 16.364 6.446 11.685 LGA W 36 W 36 5.330 0 0.609 1.327 15.018 11.818 3.377 14.510 LGA I 37 I 37 2.273 0 0.038 1.412 5.291 41.364 25.455 4.353 LGA S 38 S 38 2.556 0 0.094 0.116 3.352 42.727 34.545 3.352 LGA S 39 S 39 1.643 0 0.153 0.151 2.593 58.182 49.697 2.593 LGA F 40 F 40 1.264 0 0.024 1.045 4.480 58.182 42.810 4.318 LGA I 41 I 41 1.949 0 0.634 0.535 3.293 42.727 35.227 3.293 LGA G 42 G 42 2.371 0 0.200 0.200 2.833 35.455 35.455 - LGA R 43 R 43 0.682 0 0.047 1.156 5.966 77.727 50.248 5.966 LGA S 44 S 44 0.760 0 0.152 0.616 1.284 77.727 76.364 1.266 LGA K 45 K 45 0.801 0 0.060 0.996 6.210 66.818 37.778 6.210 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.333 9.227 10.331 12.510 9.528 4.519 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.18 31.250 28.281 0.526 LGA_LOCAL RMSD: 2.184 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 22.625 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.333 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.243520 * X + 0.650498 * Y + -0.719410 * Z + -12.207298 Y_new = -0.855499 * X + 0.205409 * Y + 0.475320 * Z + 45.975307 Z_new = 0.456968 * X + 0.731204 * Y + 0.506479 * Z + 21.610172 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.848115 -0.474583 0.965011 [DEG: -105.8892 -27.1916 55.2910 ] ZXZ: -2.154662 1.039700 0.558565 [DEG: -123.4531 59.5704 32.0034 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS288_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS288_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.18 28.281 9.33 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS288_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 REFINED PARENT N/A ATOM 9 N ALA 2 7.580 56.351 28.806 1.00 2.10 ATOM 10 CA ALA 2 8.211 55.647 29.938 1.00 2.10 ATOM 11 C ALA 2 7.179 55.268 31.026 1.00 2.10 ATOM 12 O ALA 2 6.317 56.081 31.360 1.00 2.10 ATOM 13 CB ALA 2 9.337 56.519 30.510 1.00 2.20 ATOM 14 N VAL 3 7.271 54.046 31.576 1.00 1.60 ATOM 15 CA VAL 3 6.254 53.421 32.463 1.00 1.60 ATOM 16 C VAL 3 6.843 52.829 33.753 1.00 1.60 ATOM 17 O VAL 3 8.011 52.440 33.774 1.00 1.60 ATOM 18 CB VAL 3 5.434 52.324 31.722 1.00 1.60 ATOM 19 CG1 VAL 3 5.297 52.544 30.205 1.00 1.60 ATOM 20 CG2 VAL 3 5.965 50.893 31.908 1.00 1.60 ATOM 21 N GLN 4 6.007 52.652 34.790 1.00 2.10 ATOM 22 CA GLN 4 6.338 51.864 36.003 1.00 2.10 ATOM 23 C GLN 4 5.091 51.208 36.659 1.00 2.10 ATOM 24 O GLN 4 5.064 50.908 37.852 1.00 2.10 ATOM 25 CB GLN 4 7.170 52.740 36.969 1.00 2.90 ATOM 26 CG GLN 4 7.931 51.988 38.084 1.00 2.90 ATOM 27 CD GLN 4 8.830 50.847 37.593 1.00 2.90 ATOM 28 OE1 GLN 4 9.428 50.879 36.524 1.00 2.90 ATOM 29 NE2 GLN 4 8.972 49.784 38.360 1.00 2.90 ATOM 30 N GLY 5 4.030 51.008 35.872 1.00 2.40 ATOM 31 CA GLY 5 2.676 50.639 36.317 1.00 2.40 ATOM 32 C GLY 5 1.720 51.595 35.602 1.00 2.40 ATOM 33 O GLY 5 1.124 51.205 34.598 1.00 2.40 ATOM 34 N PRO 6 1.636 52.865 36.040 1.00 2.00 ATOM 35 CA PRO 6 1.031 53.938 35.256 1.00 2.00 ATOM 36 C PRO 6 2.044 54.428 34.195 1.00 2.00 ATOM 37 O PRO 6 3.247 54.141 34.281 1.00 2.00 ATOM 38 CB PRO 6 0.716 55.028 36.284 1.00 2.10 ATOM 39 CG PRO 6 1.872 54.897 37.279 1.00 2.10 ATOM 40 CD PRO 6 2.154 53.392 37.299 1.00 2.10 ATOM 41 N TRP 7 1.578 55.200 33.209 1.00 1.60 ATOM 42 CA TRP 7 2.429 55.938 32.259 1.00 1.60 ATOM 43 C TRP 7 1.665 57.101 31.606 1.00 1.60 ATOM 44 O TRP 7 0.433 57.114 31.616 1.00 1.60 ATOM 45 CB TRP 7 3.016 54.991 31.197 1.00 2.60 ATOM 46 CG TRP 7 2.286 54.897 29.899 1.00 2.60 ATOM 47 CD1 TRP 7 1.199 54.133 29.687 1.00 2.60 ATOM 48 CD2 TRP 7 2.503 55.636 28.657 1.00 2.60 ATOM 49 NE1 TRP 7 0.669 54.426 28.450 1.00 2.60 ATOM 50 CE2 TRP 7 1.403 55.379 27.790 1.00 2.60 ATOM 51 CE3 TRP 7 3.494 56.521 28.185 1.00 2.60 ATOM 52 CZ2 TRP 7 1.231 56.037 26.568 1.00 2.60 ATOM 53 CZ3 TRP 7 3.365 57.144 26.928 1.00 2.60 ATOM 54 CH2 TRP 7 2.225 56.927 26.136 1.00 2.60 ATOM 55 N VAL 8 2.386 58.071 31.027 1.00 1.60 ATOM 56 CA VAL 8 1.815 59.248 30.337 1.00 1.60 ATOM 57 C VAL 8 2.654 59.675 29.121 1.00 1.60 ATOM 58 O VAL 8 3.886 59.646 29.162 1.00 1.60 ATOM 59 CB VAL 8 1.621 60.443 31.304 1.00 2.00 ATOM 60 CG1 VAL 8 0.519 60.184 32.339 1.00 2.00 ATOM 61 CG2 VAL 8 2.896 60.843 32.060 1.00 2.00 ATOM 62 N GLY 9 1.986 60.103 28.040 1.00 2.30 ATOM 63 CA GLY 9 2.626 60.639 26.827 1.00 2.30 ATOM 64 C GLY 9 1.662 60.798 25.646 1.00 2.30 ATOM 65 O GLY 9 1.517 59.895 24.821 1.00 2.30 ATOM 66 N SER 10 1.008 61.959 25.548 1.00 2.20 ATOM 67 CA SER 10 -0.104 62.224 24.613 1.00 2.20 ATOM 68 C SER 10 0.219 61.999 23.130 1.00 2.20 ATOM 69 O SER 10 -0.666 61.602 22.373 1.00 2.20 ATOM 70 CB SER 10 -0.596 63.665 24.792 1.00 2.50 ATOM 71 OG SER 10 -1.041 63.874 26.126 1.00 2.50 ATOM 72 N SER 11 1.474 62.178 22.702 1.00 2.30 ATOM 73 CA SER 11 1.897 62.007 21.299 1.00 2.30 ATOM 74 C SER 11 1.648 60.593 20.759 1.00 2.30 ATOM 75 O SER 11 1.274 60.430 19.596 1.00 2.30 ATOM 76 CB SER 11 3.388 62.337 21.153 1.00 2.60 ATOM 77 OG SER 11 3.659 63.647 21.632 1.00 2.60 ATOM 78 N TYR 12 1.796 59.566 21.603 1.00 2.20 ATOM 79 CA TYR 12 1.495 58.177 21.236 1.00 2.20 ATOM 80 C TYR 12 0.017 57.803 21.417 1.00 2.20 ATOM 81 O TYR 12 -0.470 56.912 20.722 1.00 2.20 ATOM 82 CB TYR 12 2.433 57.242 21.994 1.00 3.50 ATOM 83 CG TYR 12 3.833 57.219 21.419 1.00 3.50 ATOM 84 CD1 TYR 12 4.876 57.935 22.038 1.00 3.50 ATOM 85 CD2 TYR 12 4.073 56.511 20.224 1.00 3.50 ATOM 86 CE1 TYR 12 6.161 57.944 21.458 1.00 3.50 ATOM 87 CE2 TYR 12 5.356 56.514 19.647 1.00 3.50 ATOM 88 CZ TYR 12 6.403 57.233 20.261 1.00 3.50 ATOM 89 OH TYR 12 7.636 57.250 19.680 1.00 3.50 ATOM 90 N VAL 13 -0.728 58.514 22.272 1.00 2.30 ATOM 91 CA VAL 13 -2.199 58.401 22.348 1.00 2.30 ATOM 92 C VAL 13 -2.822 58.942 21.053 1.00 2.30 ATOM 93 O VAL 13 -3.720 58.319 20.492 1.00 2.30 ATOM 94 CB VAL 13 -2.775 59.133 23.582 1.00 2.60 ATOM 95 CG1 VAL 13 -4.265 58.822 23.771 1.00 2.60 ATOM 96 CG2 VAL 13 -2.047 58.738 24.875 1.00 2.60 ATOM 97 N ALA 14 -2.280 60.042 20.519 1.00 2.40 ATOM 98 CA ALA 14 -2.647 60.598 19.216 1.00 2.40 ATOM 99 C ALA 14 -2.257 59.689 18.029 1.00 2.40 ATOM 100 O ALA 14 -2.936 59.711 17.005 1.00 2.40 ATOM 101 CB ALA 14 -2.003 61.986 19.093 1.00 2.50 ATOM 102 N GLU 15 -1.201 58.872 18.143 1.00 2.60 ATOM 103 CA GLU 15 -0.815 57.894 17.111 1.00 2.60 ATOM 104 C GLU 15 -1.714 56.651 17.137 1.00 2.60 ATOM 105 O GLU 15 -2.484 56.414 16.205 1.00 2.60 ATOM 106 CB GLU 15 0.676 57.526 17.250 1.00 3.40 ATOM 107 CG GLU 15 1.171 56.497 16.218 1.00 3.40 ATOM 108 CD GLU 15 0.970 56.937 14.753 1.00 3.40 ATOM 109 OE1 GLU 15 1.079 58.145 14.439 1.00 3.40 ATOM 110 OE2 GLU 15 0.710 56.067 13.888 1.00 3.40 ATOM 111 N THR 16 -1.656 55.860 18.214 1.00 2.90 ATOM 112 CA THR 16 -2.402 54.596 18.326 1.00 2.90 ATOM 113 C THR 16 -3.917 54.840 18.323 1.00 2.90 ATOM 114 O THR 16 -4.674 54.099 17.701 1.00 2.90 ATOM 115 CB THR 16 -1.945 53.831 19.579 1.00 3.20 ATOM 116 OG1 THR 16 -0.539 53.692 19.550 1.00 3.20 ATOM 117 CG2 THR 16 -2.495 52.417 19.712 1.00 3.20 ATOM 118 N GLY 17 -4.366 55.944 18.925 1.00 3.10 ATOM 119 CA GLY 17 -5.774 56.336 18.976 1.00 3.10 ATOM 120 C GLY 17 -6.361 56.903 17.679 1.00 3.10 ATOM 121 O GLY 17 -7.578 57.042 17.622 1.00 3.10 ATOM 122 N GLN 18 -5.565 57.222 16.648 1.00 3.30 ATOM 123 CA GLN 18 -6.076 57.791 15.384 1.00 3.30 ATOM 124 C GLN 18 -5.659 56.994 14.140 1.00 3.30 ATOM 125 O GLN 18 -6.494 56.762 13.268 1.00 3.30 ATOM 126 CB GLN 18 -5.672 59.273 15.280 1.00 4.10 ATOM 127 CG GLN 18 -6.256 60.017 14.064 1.00 4.10 ATOM 128 CD GLN 18 -7.786 60.076 14.031 1.00 4.10 ATOM 129 OE1 GLN 18 -8.468 60.155 15.046 1.00 4.10 ATOM 130 NE2 GLN 18 -8.389 60.063 12.859 1.00 4.10 ATOM 131 N ASN 19 -4.403 56.538 14.054 1.00 3.10 ATOM 132 CA ASN 19 -3.978 55.610 13.002 1.00 3.10 ATOM 133 C ASN 19 -4.373 54.171 13.341 1.00 3.10 ATOM 134 O ASN 19 -5.174 53.587 12.619 1.00 3.10 ATOM 135 CB ASN 19 -2.468 55.738 12.729 1.00 3.60 ATOM 136 CG ASN 19 -2.100 56.906 11.826 1.00 3.60 ATOM 137 OD1 ASN 19 -2.870 57.378 10.999 1.00 3.60 ATOM 138 ND2 ASN 19 -0.888 57.394 11.936 1.00 3.60 ATOM 139 N TRP 20 -3.851 53.595 14.431 1.00 2.80 ATOM 140 CA TRP 20 -3.999 52.152 14.691 1.00 2.80 ATOM 141 C TRP 20 -5.473 51.765 14.913 1.00 2.80 ATOM 142 O TRP 20 -5.940 50.805 14.301 1.00 2.80 ATOM 143 CB TRP 20 -3.099 51.683 15.846 1.00 2.80 ATOM 144 CG TRP 20 -1.604 51.803 15.673 1.00 2.80 ATOM 145 CD1 TRP 20 -0.910 52.879 15.222 1.00 2.80 ATOM 146 CD2 TRP 20 -0.586 50.790 15.961 1.00 2.80 ATOM 147 NE1 TRP 20 0.438 52.588 15.173 1.00 2.80 ATOM 148 CE2 TRP 20 0.694 51.304 15.595 1.00 2.80 ATOM 149 CE3 TRP 20 -0.618 49.477 16.479 1.00 2.80 ATOM 150 CZ2 TRP 20 1.870 50.545 15.685 1.00 2.80 ATOM 151 CZ3 TRP 20 0.555 48.704 16.577 1.00 2.80 ATOM 152 CH2 TRP 20 1.795 49.224 16.157 1.00 2.80 ATOM 153 N ALA 21 -6.230 52.566 15.672 1.00 3.20 ATOM 154 CA ALA 21 -7.668 52.376 15.886 1.00 3.20 ATOM 155 C ALA 21 -8.478 52.373 14.569 1.00 3.20 ATOM 156 O ALA 21 -9.176 51.404 14.262 1.00 3.20 ATOM 157 CB ALA 21 -8.160 53.465 16.851 1.00 3.40 ATOM 158 N SER 22 -8.366 53.432 13.757 1.00 3.50 ATOM 159 CA SER 22 -9.157 53.582 12.523 1.00 3.50 ATOM 160 C SER 22 -8.683 52.679 11.374 1.00 3.50 ATOM 161 O SER 22 -9.508 52.205 10.593 1.00 3.50 ATOM 162 CB SER 22 -9.175 55.045 12.069 1.00 3.70 ATOM 163 OG SER 22 -9.706 55.869 13.100 1.00 3.70 ATOM 164 N LEU 23 -7.383 52.375 11.282 1.00 3.20 ATOM 165 CA LEU 23 -6.835 51.419 10.310 1.00 3.20 ATOM 166 C LEU 23 -7.242 49.970 10.644 1.00 3.20 ATOM 167 O LEU 23 -7.531 49.188 9.738 1.00 3.20 ATOM 168 CB LEU 23 -5.308 51.618 10.238 1.00 3.30 ATOM 169 CG LEU 23 -4.537 50.727 9.248 1.00 3.30 ATOM 170 CD1 LEU 23 -5.068 50.805 7.815 1.00 3.30 ATOM 171 CD2 LEU 23 -3.073 51.174 9.217 1.00 3.30 ATOM 172 N ALA 24 -7.347 49.624 11.934 1.00 3.10 ATOM 173 CA ALA 24 -7.899 48.344 12.380 1.00 3.10 ATOM 174 C ALA 24 -9.409 48.203 12.107 1.00 3.10 ATOM 175 O ALA 24 -9.883 47.086 11.928 1.00 3.10 ATOM 176 CB ALA 24 -7.614 48.170 13.877 1.00 3.20 ATOM 177 N ALA 25 -10.172 49.301 12.059 1.00 3.50 ATOM 178 CA ALA 25 -11.624 49.257 11.858 1.00 3.50 ATOM 179 C ALA 25 -12.046 48.697 10.477 1.00 3.50 ATOM 180 O ALA 25 -13.113 48.092 10.361 1.00 3.50 ATOM 181 CB ALA 25 -12.176 50.671 12.096 1.00 3.70 ATOM 182 N ASN 26 -11.219 48.864 9.436 1.00 3.80 ATOM 183 CA ASN 26 -11.563 48.527 8.043 1.00 3.80 ATOM 184 C ASN 26 -12.092 47.088 7.861 1.00 3.80 ATOM 185 O ASN 26 -13.092 46.881 7.176 1.00 3.80 ATOM 186 CB ASN 26 -10.323 48.739 7.154 1.00 3.90 ATOM 187 CG ASN 26 -9.930 50.193 6.932 1.00 3.90 ATOM 188 OD1 ASN 26 -10.604 51.136 7.325 1.00 3.90 ATOM 189 ND2 ASN 26 -8.824 50.420 6.260 1.00 3.90 ATOM 190 N GLU 27 -11.450 46.107 8.495 1.00 3.90 ATOM 191 CA GLU 27 -11.857 44.695 8.533 1.00 3.90 ATOM 192 C GLU 27 -11.554 44.145 9.936 1.00 3.90 ATOM 193 O GLU 27 -10.610 44.587 10.582 1.00 3.90 ATOM 194 CB GLU 27 -11.104 43.844 7.486 1.00 5.10 ATOM 195 CG GLU 27 -11.021 44.365 6.039 1.00 5.10 ATOM 196 CD GLU 27 -12.287 44.136 5.186 1.00 5.10 ATOM 197 OE1 GLU 27 -12.930 43.064 5.301 1.00 5.10 ATOM 198 OE2 GLU 27 -12.588 44.988 4.313 1.00 5.10 ATOM 199 N LEU 28 -12.307 43.164 10.416 1.00 3.60 ATOM 200 CA LEU 28 -12.131 42.525 11.724 1.00 3.60 ATOM 201 C LEU 28 -12.555 41.055 11.625 1.00 3.60 ATOM 202 O LEU 28 -13.520 40.735 10.936 1.00 3.60 ATOM 203 CB LEU 28 -12.983 43.262 12.784 1.00 3.90 ATOM 204 CG LEU 28 -12.579 44.706 13.145 1.00 3.90 ATOM 205 CD1 LEU 28 -13.651 45.333 14.040 1.00 3.90 ATOM 206 CD2 LEU 28 -11.255 44.754 13.909 1.00 3.90 ATOM 207 N ARG 29 -11.872 40.157 12.339 1.00 4.60 ATOM 208 CA ARG 29 -12.277 38.744 12.519 1.00 4.60 ATOM 209 C ARG 29 -12.578 38.500 14.004 1.00 4.60 ATOM 210 O ARG 29 -12.699 39.460 14.756 1.00 4.60 ATOM 211 CB ARG 29 -11.162 37.853 11.931 1.00 5.70 ATOM 212 CG ARG 29 -10.978 38.047 10.412 1.00 5.70 ATOM 213 CD ARG 29 -11.724 36.995 9.589 1.00 5.70 ATOM 214 NE ARG 29 -11.639 37.314 8.154 1.00 5.70 ATOM 215 CZ ARG 29 -10.634 37.057 7.334 1.00 5.70 ATOM 216 NH1 ARG 29 -10.704 37.431 6.089 1.00 5.70 ATOM 217 NH2 ARG 29 -9.544 36.446 7.711 1.00 5.70 ATOM 218 N VAL 30 -12.687 37.243 14.445 1.00 5.10 ATOM 219 CA VAL 30 -12.800 36.907 15.888 1.00 5.10 ATOM 220 C VAL 30 -11.423 36.851 16.575 1.00 5.10 ATOM 221 O VAL 30 -11.309 37.212 17.741 1.00 5.10 ATOM 222 CB VAL 30 -13.615 35.613 16.107 1.00 5.80 ATOM 223 CG1 VAL 30 -13.874 35.321 17.591 1.00 5.80 ATOM 224 CG2 VAL 30 -14.983 35.723 15.421 1.00 5.80 ATOM 225 N THR 31 -10.363 36.475 15.838 1.00 4.50 ATOM 226 CA THR 31 -8.976 36.341 16.349 1.00 4.50 ATOM 227 C THR 31 -7.907 36.966 15.422 1.00 4.50 ATOM 228 O THR 31 -6.718 36.666 15.535 1.00 4.50 ATOM 229 CB THR 31 -8.703 34.861 16.711 1.00 5.40 ATOM 230 OG1 THR 31 -7.515 34.691 17.459 1.00 5.40 ATOM 231 CG2 THR 31 -8.614 33.924 15.504 1.00 5.40 ATOM 232 N GLU 32 -8.317 37.827 14.478 1.00 2.80 ATOM 233 CA GLU 32 -7.451 38.426 13.441 1.00 2.80 ATOM 234 C GLU 32 -7.899 39.858 13.073 1.00 2.80 ATOM 235 O GLU 32 -9.024 40.268 13.371 1.00 2.80 ATOM 236 CB GLU 32 -7.408 37.567 12.151 1.00 3.30 ATOM 237 CG GLU 32 -7.438 36.037 12.301 1.00 3.30 ATOM 238 CD GLU 32 -7.572 35.327 10.936 1.00 3.30 ATOM 239 OE1 GLU 32 -8.534 35.617 10.181 1.00 3.30 ATOM 240 OE2 GLU 32 -6.735 34.446 10.621 1.00 3.30 ATOM 241 N ARG 33 -7.026 40.608 12.386 1.00 3.40 ATOM 242 CA ARG 33 -7.230 41.986 11.878 1.00 3.40 ATOM 243 C ARG 33 -6.418 42.200 10.580 1.00 3.40 ATOM 244 O ARG 33 -5.405 41.521 10.411 1.00 3.40 ATOM 245 CB ARG 33 -6.764 43.004 12.947 1.00 4.60 ATOM 246 CG ARG 33 -7.531 42.979 14.278 1.00 4.60 ATOM 247 CD ARG 33 -6.977 44.050 15.228 1.00 4.60 ATOM 248 NE ARG 33 -5.573 43.751 15.610 1.00 4.60 ATOM 249 CZ ARG 33 -4.503 44.519 15.497 1.00 4.60 ATOM 250 NH1 ARG 33 -3.353 44.075 15.893 1.00 4.60 ATOM 251 NH2 ARG 33 -4.562 45.728 15.026 1.00 4.60 ATOM 252 N PRO 34 -6.726 43.208 9.739 1.00 4.90 ATOM 253 CA PRO 34 -5.899 43.581 8.584 1.00 4.90 ATOM 254 C PRO 34 -4.524 44.109 9.024 1.00 4.90 ATOM 255 O PRO 34 -3.497 43.701 8.485 1.00 4.90 ATOM 256 CB PRO 34 -6.711 44.629 7.811 1.00 5.70 ATOM 257 CG PRO 34 -7.623 45.246 8.869 1.00 5.70 ATOM 258 CD PRO 34 -7.890 44.071 9.809 1.00 5.70 ATOM 259 N PHE 35 -4.485 44.934 10.081 1.00 4.50 ATOM 260 CA PHE 35 -3.225 45.367 10.697 1.00 4.50 ATOM 261 C PHE 35 -2.493 44.208 11.402 1.00 4.50 ATOM 262 O PHE 35 -1.275 44.235 11.509 1.00 4.50 ATOM 263 CB PHE 35 -3.490 46.555 11.637 1.00 6.20 ATOM 264 CG PHE 35 -2.237 47.285 12.098 1.00 6.20 ATOM 265 CD1 PHE 35 -1.839 48.467 11.445 1.00 6.20 ATOM 266 CD2 PHE 35 -1.451 46.784 13.155 1.00 6.20 ATOM 267 CE1 PHE 35 -0.675 49.148 11.847 1.00 6.20 ATOM 268 CE2 PHE 35 -0.276 47.453 13.545 1.00 6.20 ATOM 269 CZ PHE 35 0.108 48.639 12.897 1.00 6.20 ATOM 270 N TRP 36 -3.195 43.152 11.850 1.00 2.40 ATOM 271 CA TRP 36 -2.532 41.942 12.361 1.00 2.40 ATOM 272 C TRP 36 -1.852 41.140 11.244 1.00 2.40 ATOM 273 O TRP 36 -0.696 40.764 11.413 1.00 2.40 ATOM 274 CB TRP 36 -3.474 41.070 13.200 1.00 3.50 ATOM 275 CG TRP 36 -2.879 39.764 13.633 1.00 3.50 ATOM 276 CD1 TRP 36 -2.039 39.587 14.677 1.00 3.50 ATOM 277 CD2 TRP 36 -2.968 38.460 12.976 1.00 3.50 ATOM 278 NE1 TRP 36 -1.615 38.271 14.722 1.00 3.50 ATOM 279 CE2 TRP 36 -2.142 37.535 13.683 1.00 3.50 ATOM 280 CE3 TRP 36 -3.656 37.969 11.846 1.00 3.50 ATOM 281 CZ2 TRP 36 -1.994 36.199 13.282 1.00 3.50 ATOM 282 CZ3 TRP 36 -3.529 36.624 11.442 1.00 3.50 ATOM 283 CH2 TRP 36 -2.695 35.742 12.152 1.00 3.50 ATOM 284 N ILE 37 -2.482 40.924 10.077 1.00 2.60 ATOM 285 CA ILE 37 -1.772 40.249 8.968 1.00 2.60 ATOM 286 C ILE 37 -0.600 41.082 8.415 1.00 2.60 ATOM 287 O ILE 37 0.364 40.492 7.927 1.00 2.60 ATOM 288 CB ILE 37 -2.689 39.722 7.840 1.00 3.70 ATOM 289 CG1 ILE 37 -3.435 40.818 7.059 1.00 3.70 ATOM 290 CG2 ILE 37 -3.653 38.655 8.379 1.00 3.70 ATOM 291 CD1 ILE 37 -4.023 40.321 5.731 1.00 3.70 ATOM 292 N SER 38 -0.620 42.419 8.532 1.00 3.20 ATOM 293 CA SER 38 0.553 43.253 8.214 1.00 3.20 ATOM 294 C SER 38 1.600 43.295 9.344 1.00 3.20 ATOM 295 O SER 38 2.796 43.281 9.048 1.00 3.20 ATOM 296 CB SER 38 0.149 44.660 7.755 1.00 3.90 ATOM 297 OG SER 38 -0.311 45.468 8.821 1.00 3.90 ATOM 298 N SER 39 1.210 43.276 10.628 1.00 3.00 ATOM 299 CA SER 39 2.152 43.222 11.761 1.00 3.00 ATOM 300 C SER 39 2.826 41.853 11.894 1.00 3.00 ATOM 301 O SER 39 4.017 41.795 12.180 1.00 3.00 ATOM 302 CB SER 39 1.496 43.635 13.088 1.00 3.40 ATOM 303 OG SER 39 0.687 42.610 13.640 1.00 3.40 ATOM 304 N PHE 40 2.128 40.756 11.591 1.00 3.00 ATOM 305 CA PHE 40 2.636 39.375 11.590 1.00 3.00 ATOM 306 C PHE 40 3.909 39.185 10.734 1.00 3.00 ATOM 307 O PHE 40 4.750 38.339 11.044 1.00 3.00 ATOM 308 CB PHE 40 1.483 38.480 11.101 1.00 4.00 ATOM 309 CG PHE 40 1.793 37.004 10.950 1.00 4.00 ATOM 310 CD1 PHE 40 1.683 36.144 12.060 1.00 4.00 ATOM 311 CD2 PHE 40 2.143 36.478 9.690 1.00 4.00 ATOM 312 CE1 PHE 40 1.924 34.766 11.911 1.00 4.00 ATOM 313 CE2 PHE 40 2.385 35.101 9.543 1.00 4.00 ATOM 314 CZ PHE 40 2.275 34.244 10.653 1.00 4.00 ATOM 315 N ILE 41 4.088 40.013 9.698 1.00 3.20 ATOM 316 CA ILE 41 5.283 40.059 8.831 1.00 3.20 ATOM 317 C ILE 41 6.531 40.591 9.583 1.00 3.20 ATOM 318 O ILE 41 7.663 40.260 9.223 1.00 3.20 ATOM 319 CB ILE 41 4.947 40.902 7.568 1.00 4.30 ATOM 320 CG1 ILE 41 3.776 40.270 6.770 1.00 4.30 ATOM 321 CG2 ILE 41 6.159 41.095 6.637 1.00 4.30 ATOM 322 CD1 ILE 41 3.143 41.211 5.733 1.00 4.30 ATOM 323 N GLY 42 6.335 41.387 10.644 1.00 2.10 ATOM 324 CA GLY 42 7.367 42.100 11.415 1.00 2.10 ATOM 325 C GLY 42 7.278 41.911 12.938 1.00 2.10 ATOM 326 O GLY 42 7.580 42.845 13.689 1.00 2.10 ATOM 327 N ARG 43 6.831 40.739 13.409 1.00 2.90 ATOM 328 CA ARG 43 6.784 40.343 14.835 1.00 2.90 ATOM 329 C ARG 43 7.210 38.880 15.007 1.00 2.90 ATOM 330 O ARG 43 6.863 38.039 14.174 1.00 2.90 ATOM 331 CB ARG 43 5.367 40.516 15.422 1.00 4.90 ATOM 332 CG ARG 43 4.758 41.921 15.334 1.00 4.90 ATOM 333 CD ARG 43 5.334 42.947 16.308 1.00 4.90 ATOM 334 NE ARG 43 4.629 44.230 16.121 1.00 4.90 ATOM 335 CZ ARG 43 4.791 45.089 15.126 1.00 4.90 ATOM 336 NH1 ARG 43 3.938 46.056 14.948 1.00 4.90 ATOM 337 NH2 ARG 43 5.765 44.997 14.267 1.00 4.90 ATOM 338 N SER 44 7.923 38.564 16.091 1.00 2.70 ATOM 339 CA SER 44 8.258 37.173 16.460 1.00 2.70 ATOM 340 C SER 44 7.133 36.473 17.268 1.00 2.70 ATOM 341 O SER 44 6.046 37.031 17.444 1.00 2.70 ATOM 342 CB SER 44 9.631 37.130 17.150 1.00 3.20 ATOM 343 OG SER 44 10.139 35.803 17.134 1.00 3.20 ATOM 344 N LYS 45 7.392 35.236 17.723 1.00 2.90 ATOM 345 CA LYS 45 6.450 34.265 18.329 1.00 2.90 ATOM 346 C LYS 45 5.646 34.803 19.536 1.00 2.90 ATOM 347 O LYS 45 6.111 35.687 20.247 1.00 2.90 ATOM 348 CB LYS 45 7.239 33.012 18.748 1.00 3.40 ATOM 349 CG LYS 45 8.021 32.275 17.645 1.00 3.40 ATOM 350 CD LYS 45 7.124 31.632 16.577 1.00 3.40 ATOM 351 CE LYS 45 7.971 30.741 15.655 1.00 3.40 ATOM 352 NZ LYS 45 7.142 30.051 14.627 1.00 3.40 TER END