####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS281_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 4.94 14.90 LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.96 15.97 LCS_AVERAGE: 36.57 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.94 13.91 LCS_AVERAGE: 15.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.52 12.54 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.86 21.53 LONGEST_CONTINUOUS_SEGMENT: 4 11 - 14 0.88 20.96 LONGEST_CONTINUOUS_SEGMENT: 4 19 - 22 0.59 17.50 LONGEST_CONTINUOUS_SEGMENT: 4 21 - 24 0.88 18.54 LONGEST_CONTINUOUS_SEGMENT: 4 23 - 26 0.71 19.33 LONGEST_CONTINUOUS_SEGMENT: 4 28 - 31 0.98 15.49 LONGEST_CONTINUOUS_SEGMENT: 4 32 - 35 0.54 15.86 LONGEST_CONTINUOUS_SEGMENT: 4 34 - 37 0.62 14.62 LONGEST_CONTINUOUS_SEGMENT: 4 35 - 38 0.88 14.69 LONGEST_CONTINUOUS_SEGMENT: 4 42 - 45 0.86 25.73 LCS_AVERAGE: 8.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 5 6 7 7 7 8 12 12 15 15 16 17 18 19 21 22 24 25 LCS_GDT V 3 V 3 4 6 10 3 4 5 6 8 8 10 10 10 12 13 13 15 17 18 20 21 22 24 25 LCS_GDT Q 4 Q 4 4 6 13 3 4 5 6 8 8 10 10 10 11 13 13 15 17 18 19 21 21 23 24 LCS_GDT G 5 G 5 4 6 13 3 4 5 6 7 8 10 10 10 12 13 13 15 17 18 19 21 21 23 24 LCS_GDT P 6 P 6 4 6 13 0 3 4 5 7 7 7 8 9 12 13 13 15 17 18 19 21 21 23 24 LCS_GDT W 7 W 7 4 6 13 0 3 4 6 7 7 7 8 9 12 13 13 14 17 18 19 21 21 23 24 LCS_GDT V 8 V 8 4 5 13 1 3 4 4 5 7 7 9 10 12 13 13 15 17 18 19 21 21 23 24 LCS_GDT G 9 G 9 4 5 13 0 3 4 4 5 6 6 8 9 12 13 13 15 17 18 19 21 21 23 24 LCS_GDT S 10 S 10 3 5 13 1 3 5 5 5 6 6 8 9 12 13 13 14 15 16 17 19 21 23 24 LCS_GDT S 11 S 11 4 4 13 3 3 5 5 5 6 6 7 8 10 11 12 13 15 18 20 20 21 23 24 LCS_GDT Y 12 Y 12 4 4 13 3 3 5 5 5 5 5 6 8 9 10 12 12 14 16 20 20 21 23 24 LCS_GDT V 13 V 13 4 4 13 3 3 4 4 4 5 6 8 9 12 13 13 14 15 18 20 21 21 23 24 LCS_GDT A 14 A 14 4 4 17 3 3 4 4 4 6 7 8 9 12 13 15 15 16 18 20 21 21 23 24 LCS_GDT E 15 E 15 3 7 17 3 3 3 4 6 7 8 10 10 14 15 15 16 17 18 20 21 21 24 25 LCS_GDT T 16 T 16 3 7 17 3 3 5 7 8 8 10 10 12 14 15 15 16 17 18 20 21 22 24 25 LCS_GDT G 17 G 17 3 7 17 3 3 5 7 8 8 10 10 12 14 15 15 16 17 18 20 21 21 24 25 LCS_GDT Q 18 Q 18 3 7 17 0 3 4 4 6 7 8 8 12 14 15 15 16 16 18 20 20 22 24 25 LCS_GDT N 19 N 19 4 7 17 3 4 4 4 6 7 8 10 12 14 14 15 16 16 18 20 20 22 24 25 LCS_GDT W 20 W 20 4 7 17 3 4 4 4 6 7 8 10 12 14 14 15 16 16 18 20 20 22 24 25 LCS_GDT A 21 A 21 4 7 17 3 4 4 4 6 7 8 10 12 14 14 15 16 16 18 20 20 22 24 25 LCS_GDT S 22 S 22 4 4 17 3 4 4 4 6 7 8 10 12 14 14 15 16 16 18 19 19 20 22 23 LCS_GDT L 23 L 23 4 5 17 3 4 4 5 6 6 8 10 11 14 14 15 16 16 18 20 20 22 24 25 LCS_GDT A 24 A 24 4 5 18 3 4 4 5 6 6 7 9 9 11 11 12 14 16 18 20 20 22 24 25 LCS_GDT A 25 A 25 4 5 18 3 4 4 5 6 7 8 10 12 14 14 15 16 16 18 20 20 22 24 25 LCS_GDT N 26 N 26 4 5 18 3 4 4 5 6 7 8 10 12 14 15 15 17 17 18 20 20 22 24 25 LCS_GDT E 27 E 27 3 11 18 3 3 6 8 9 11 12 12 12 14 15 15 17 17 18 20 20 22 24 25 LCS_GDT L 28 L 28 4 11 18 3 4 5 8 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT R 29 R 29 4 11 18 3 3 4 5 8 10 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT V 30 V 30 4 11 18 4 6 6 7 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT T 31 T 31 4 11 18 4 6 6 8 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT E 32 E 32 4 11 18 4 6 6 8 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT R 33 R 33 4 11 18 3 4 5 8 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT P 34 P 34 4 11 18 4 6 6 8 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT F 35 F 35 4 11 18 3 4 5 7 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 LCS_GDT W 36 W 36 4 11 18 4 6 6 8 9 11 12 12 12 14 15 15 17 17 18 20 20 22 24 25 LCS_GDT I 37 I 37 4 11 18 3 4 6 8 9 11 12 12 12 14 15 15 17 17 18 20 20 22 24 25 LCS_GDT S 38 S 38 4 9 18 1 6 6 7 9 11 12 12 12 14 15 15 17 17 17 20 20 22 24 25 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 5 7 9 12 12 14 15 15 17 17 17 19 20 22 24 25 LCS_GDT F 40 F 40 3 4 18 0 3 3 4 5 5 7 9 11 14 15 15 17 17 18 19 20 22 24 25 LCS_GDT I 41 I 41 3 5 18 0 3 3 4 6 6 8 10 11 14 15 15 17 17 18 19 19 21 23 25 LCS_GDT G 42 G 42 4 5 18 0 3 4 5 6 6 7 9 11 13 13 13 17 17 17 19 19 20 21 22 LCS_GDT R 43 R 43 4 5 17 1 3 4 4 5 5 7 9 11 11 11 12 14 14 15 16 19 20 21 22 LCS_GDT S 44 S 44 4 5 16 0 3 4 4 5 5 5 6 7 9 10 11 12 13 15 16 19 20 21 22 LCS_GDT K 45 K 45 4 5 13 0 3 4 4 5 5 5 6 6 7 8 9 12 13 13 13 15 15 16 17 LCS_AVERAGE LCS_A: 20.28 ( 8.63 15.65 36.57 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 8 9 11 12 12 12 14 15 15 17 17 18 20 21 22 24 25 GDT PERCENT_AT 9.09 13.64 13.64 18.18 20.45 25.00 27.27 27.27 27.27 31.82 34.09 34.09 38.64 38.64 40.91 45.45 47.73 50.00 54.55 56.82 GDT RMS_LOCAL 0.06 0.57 0.57 1.38 1.51 1.83 2.09 2.09 2.09 3.07 3.51 3.51 4.53 4.53 5.08 5.43 5.88 6.34 6.74 6.97 GDT RMS_ALL_AT 16.01 15.26 15.26 13.79 13.79 14.06 14.17 14.17 14.17 15.00 13.97 13.97 16.14 16.14 14.41 14.57 12.17 13.34 13.40 13.80 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.689 0 0.094 0.139 9.630 0.000 0.000 - LGA V 3 V 3 10.556 0 0.059 0.100 12.517 0.000 0.000 12.093 LGA Q 4 Q 4 16.703 0 0.134 0.212 19.147 0.000 0.000 18.143 LGA G 5 G 5 21.522 0 0.197 0.197 21.522 0.000 0.000 - LGA P 6 P 6 22.323 0 0.673 0.540 26.416 0.000 0.000 26.416 LGA W 7 W 7 19.859 0 0.351 1.185 22.434 0.000 0.000 22.403 LGA V 8 V 8 18.528 0 0.669 0.861 19.879 0.000 0.000 18.706 LGA G 9 G 9 20.511 0 0.513 0.513 20.615 0.000 0.000 - LGA S 10 S 10 23.353 0 0.672 0.667 26.726 0.000 0.000 26.726 LGA S 11 S 11 19.641 0 0.585 0.570 20.562 0.000 0.000 16.799 LGA Y 12 Y 12 18.346 0 0.104 1.361 25.083 0.000 0.000 25.083 LGA V 13 V 13 18.491 0 0.626 0.905 21.635 0.000 0.000 21.635 LGA A 14 A 14 17.196 0 0.613 0.583 17.196 0.000 0.000 - LGA E 15 E 15 12.728 0 0.635 1.219 15.151 0.000 0.000 14.962 LGA T 16 T 16 11.014 0 0.545 1.017 11.812 0.000 0.000 11.070 LGA G 17 G 17 13.755 0 0.645 0.645 16.878 0.000 0.000 - LGA Q 18 Q 18 14.924 0 0.465 1.073 21.223 0.000 0.000 21.223 LGA N 19 N 19 16.760 0 0.650 1.201 20.651 0.000 0.000 20.651 LGA W 20 W 20 19.261 0 0.097 1.115 28.609 0.000 0.000 28.609 LGA A 21 A 21 17.957 0 0.665 0.615 18.496 0.000 0.000 - LGA S 22 S 22 21.432 0 0.023 0.047 23.929 0.000 0.000 23.879 LGA L 23 L 23 16.335 0 0.621 1.396 18.289 0.000 0.000 18.104 LGA A 24 A 24 12.439 0 0.639 0.609 14.190 0.000 0.000 - LGA A 25 A 25 11.015 0 0.401 0.391 13.012 0.000 0.000 - LGA N 26 N 26 7.942 0 0.652 0.818 13.584 0.000 0.000 10.457 LGA E 27 E 27 2.026 0 0.657 1.467 8.659 34.545 15.960 7.320 LGA L 28 L 28 1.501 0 0.283 1.198 3.613 52.273 46.591 1.823 LGA R 29 R 29 3.715 0 0.557 1.649 10.038 16.364 5.950 10.038 LGA V 30 V 30 2.533 0 0.262 1.039 7.203 49.091 28.312 6.265 LGA T 31 T 31 1.323 0 0.300 1.213 3.606 66.818 56.883 2.372 LGA E 32 E 32 0.195 0 0.361 0.870 3.132 78.636 60.606 2.610 LGA R 33 R 33 2.298 0 0.682 1.358 5.428 26.818 30.083 2.877 LGA P 34 P 34 0.543 0 0.651 0.520 3.054 56.364 42.857 3.054 LGA F 35 F 35 2.430 0 0.061 1.234 12.211 38.636 14.545 12.211 LGA W 36 W 36 0.774 0 0.097 0.215 8.257 73.636 25.065 8.257 LGA I 37 I 37 2.170 0 0.664 1.373 5.741 52.273 26.818 5.741 LGA S 38 S 38 2.679 0 0.658 0.847 5.291 21.818 17.576 5.291 LGA S 39 S 39 7.221 0 0.708 0.592 8.987 0.000 0.000 7.542 LGA F 40 F 40 7.934 0 0.628 0.939 12.947 0.000 0.000 12.947 LGA I 41 I 41 11.800 0 0.156 1.120 15.409 0.000 0.000 15.094 LGA G 42 G 42 17.083 0 0.723 0.723 17.872 0.000 0.000 - LGA R 43 R 43 18.823 0 0.148 0.667 25.131 0.000 0.000 25.131 LGA S 44 S 44 17.488 0 0.642 0.741 20.991 0.000 0.000 17.220 LGA K 45 K 45 19.672 0 0.677 0.734 22.451 0.000 0.000 15.807 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.310 11.196 12.269 12.893 8.437 4.623 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.09 26.136 23.610 0.548 LGA_LOCAL RMSD: 2.088 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.175 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.310 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.478279 * X + -0.794877 * Y + -0.373388 * Z + 89.732185 Y_new = -0.852170 * X + 0.317299 * Y + 0.416085 * Z + 37.573467 Z_new = -0.212261 * X + 0.517196 * Y + -0.829129 * Z + 40.122364 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.082234 0.213888 2.583870 [DEG: -119.3032 12.2549 148.0448 ] ZXZ: -2.410225 2.548343 -0.389446 [DEG: -138.0957 146.0093 -22.3136 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS281_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.09 23.610 11.31 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS281_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 10 N ALA 2 15.454 37.241 17.162 1.00 0.70 ATOM 11 CA ALA 2 14.954 36.712 18.413 1.00 0.60 ATOM 12 C ALA 2 14.090 37.740 19.085 1.00 0.40 ATOM 13 O ALA 2 14.471 38.905 19.215 1.00 0.50 ATOM 15 CB ALA 2 16.050 36.295 19.409 1.00 0.50 ATOM 16 N VAL 3 12.883 37.303 19.501 1.00 0.40 ATOM 17 CA VAL 3 11.925 38.150 20.155 1.00 0.50 ATOM 18 C VAL 3 11.977 37.825 21.623 1.00 0.40 ATOM 19 O VAL 3 11.727 36.688 22.037 1.00 0.40 ATOM 21 CB VAL 3 10.508 37.966 19.623 1.00 0.40 ATOM 22 CG1 VAL 3 9.484 38.795 20.425 1.00 0.50 ATOM 23 CG2 VAL 3 10.484 38.311 18.124 1.00 0.40 ATOM 24 N GLN 4 12.332 38.850 22.427 1.00 0.40 ATOM 25 CA GLN 4 12.402 38.760 23.861 1.00 0.40 ATOM 26 C GLN 4 11.421 39.798 24.291 1.00 0.70 ATOM 27 O GLN 4 11.629 40.996 24.086 1.00 0.50 ATOM 29 CB GLN 4 13.791 39.083 24.454 1.00 0.70 ATOM 30 CG GLN 4 14.915 38.108 24.136 1.00 0.60 ATOM 31 CD GLN 4 16.229 38.531 24.771 1.00 0.40 ATOM 32 OE1 GLN 4 16.452 39.712 25.047 1.00 0.60 ATOM 33 NE2 GLN 4 17.101 37.573 25.016 1.00 0.60 ATOM 34 N GLY 5 10.301 39.332 24.880 1.00 0.60 ATOM 35 CA GLY 5 9.236 40.185 25.319 1.00 0.40 ATOM 36 C GLY 5 8.289 40.125 24.148 1.00 0.50 ATOM 37 O GLY 5 8.670 40.574 23.065 1.00 0.40 ATOM 39 N PRO 6 7.057 39.663 24.327 1.00 0.40 ATOM 40 CA PRO 6 6.086 39.521 23.258 1.00 0.70 ATOM 41 C PRO 6 5.708 40.768 22.506 1.00 0.40 ATOM 42 O PRO 6 5.791 41.868 23.058 1.00 0.50 ATOM 43 CB PRO 6 4.870 38.845 23.888 1.00 0.70 ATOM 44 CG PRO 6 5.251 38.636 25.353 1.00 0.70 ATOM 45 CD PRO 6 6.709 38.260 25.244 1.00 0.60 ATOM 46 N TRP 7 5.302 40.573 21.233 1.00 0.50 ATOM 47 CA TRP 7 5.019 41.604 20.259 1.00 0.60 ATOM 48 C TRP 7 3.925 42.538 20.671 1.00 0.50 ATOM 49 O TRP 7 2.903 42.123 21.224 1.00 0.60 ATOM 51 CB TRP 7 4.527 41.028 18.911 1.00 0.70 ATOM 52 CG TRP 7 4.319 42.123 17.923 1.00 0.50 ATOM 53 CD1 TRP 7 3.091 42.619 17.525 1.00 0.40 ATOM 54 CD2 TRP 7 5.304 42.803 17.181 1.00 0.60 ATOM 55 NE1 TRP 7 3.274 43.594 16.563 1.00 0.50 ATOM 56 CE2 TRP 7 4.638 43.727 16.343 1.00 0.60 ATOM 57 CE3 TRP 7 6.710 42.772 17.131 1.00 0.40 ATOM 58 CZ2 TRP 7 5.337 44.560 15.453 1.00 0.60 ATOM 59 CZ3 TRP 7 7.385 43.602 16.250 1.00 0.60 ATOM 60 CH2 TRP 7 6.689 44.478 15.436 1.00 0.50 ATOM 61 N VAL 8 4.161 43.845 20.411 1.00 0.50 ATOM 62 CA VAL 8 3.228 44.905 20.695 1.00 0.40 ATOM 63 C VAL 8 3.479 46.004 19.678 1.00 0.70 ATOM 64 O VAL 8 4.607 46.173 19.199 1.00 0.60 ATOM 66 CB VAL 8 3.322 45.409 22.140 1.00 0.60 ATOM 67 CG1 VAL 8 4.703 46.030 22.442 1.00 0.60 ATOM 68 CG2 VAL 8 2.117 46.306 22.471 1.00 0.50 ATOM 69 N GLY 9 2.414 46.758 19.306 1.00 0.70 ATOM 70 CA GLY 9 2.600 47.841 18.379 1.00 0.50 ATOM 71 C GLY 9 1.490 48.051 17.403 1.00 0.50 ATOM 72 O GLY 9 0.890 47.112 16.870 1.00 0.40 ATOM 74 N SER 10 1.237 49.353 17.146 1.00 0.50 ATOM 75 CA SER 10 0.238 49.807 16.218 1.00 0.50 ATOM 76 C SER 10 1.045 50.313 15.059 1.00 0.60 ATOM 77 O SER 10 1.984 51.098 15.232 1.00 0.50 ATOM 79 CB SER 10 -0.640 50.949 16.778 1.00 0.50 ATOM 80 OG SER 10 0.138 52.099 17.072 1.00 0.70 ATOM 81 N SER 11 0.683 49.857 13.847 1.00 0.60 ATOM 82 CA SER 11 1.374 50.218 12.642 1.00 0.70 ATOM 83 C SER 11 0.464 50.102 11.453 1.00 0.70 ATOM 84 O SER 11 -0.647 49.583 11.576 1.00 0.70 ATOM 86 CB SER 11 2.621 49.323 12.429 1.00 0.60 ATOM 87 OG SER 11 3.342 49.726 11.273 1.00 0.60 ATOM 88 N TYR 12 0.890 50.642 10.278 1.00 0.40 ATOM 89 CA TYR 12 0.092 50.595 9.077 1.00 0.50 ATOM 90 C TYR 12 0.290 49.192 8.530 1.00 0.70 ATOM 91 O TYR 12 -0.675 48.518 8.163 1.00 0.50 ATOM 93 CB TYR 12 0.549 51.620 8.008 1.00 0.40 ATOM 94 CG TYR 12 0.319 53.016 8.557 1.00 0.70 ATOM 95 CD1 TYR 12 -0.893 53.663 8.459 1.00 0.50 ATOM 96 CD2 TYR 12 1.362 53.714 9.166 1.00 0.40 ATOM 97 CE1 TYR 12 -1.093 54.956 8.928 1.00 0.40 ATOM 98 CE2 TYR 12 1.211 55.021 9.602 1.00 0.70 ATOM 99 CZ TYR 12 -0.015 55.635 9.470 1.00 0.60 ATOM 100 OH TYR 12 -0.182 56.948 9.834 1.00 0.50 ATOM 101 N VAL 13 1.565 48.732 8.472 1.00 0.70 ATOM 102 CA VAL 13 1.944 47.416 8.004 1.00 0.60 ATOM 103 C VAL 13 2.955 46.952 9.023 1.00 0.40 ATOM 104 O VAL 13 3.822 47.729 9.443 1.00 0.60 ATOM 106 CB VAL 13 2.598 47.380 6.618 1.00 0.70 ATOM 107 CG1 VAL 13 3.937 48.161 6.611 1.00 0.70 ATOM 108 CG2 VAL 13 2.824 45.924 6.171 1.00 0.50 ATOM 109 N ALA 14 2.841 45.681 9.479 1.00 0.40 ATOM 110 CA ALA 14 3.776 45.154 10.441 1.00 0.70 ATOM 111 C ALA 14 4.463 43.965 9.854 1.00 0.60 ATOM 112 O ALA 14 3.815 42.967 9.536 1.00 0.40 ATOM 114 CB ALA 14 3.152 44.716 11.777 1.00 0.50 ATOM 115 N GLU 15 5.802 44.060 9.684 1.00 0.40 ATOM 116 CA GLU 15 6.554 42.968 9.147 1.00 0.60 ATOM 117 C GLU 15 7.192 42.255 10.303 1.00 0.40 ATOM 118 O GLU 15 7.958 42.847 11.069 1.00 0.70 ATOM 120 CB GLU 15 7.602 43.411 8.102 1.00 0.50 ATOM 121 CG GLU 15 6.984 43.956 6.842 1.00 0.50 ATOM 122 CD GLU 15 8.011 44.394 5.808 1.00 0.60 ATOM 123 OE1 GLU 15 9.203 44.461 6.100 1.00 0.60 ATOM 124 OE2 GLU 15 7.541 44.691 4.671 1.00 0.40 ATOM 125 N THR 16 6.850 40.961 10.450 1.00 0.60 ATOM 126 CA THR 16 7.369 40.135 11.503 1.00 0.60 ATOM 127 C THR 16 7.800 38.886 10.776 1.00 0.70 ATOM 128 O THR 16 7.025 37.930 10.636 1.00 0.50 ATOM 130 CB THR 16 6.315 39.832 12.561 1.00 0.70 ATOM 131 OG1 THR 16 5.928 41.026 13.228 1.00 0.40 ATOM 132 CG2 THR 16 6.896 38.858 13.606 1.00 0.60 ATOM 133 N GLY 17 9.056 38.881 10.275 1.00 0.50 ATOM 134 CA GLY 17 9.547 37.749 9.533 1.00 0.40 ATOM 135 C GLY 17 10.841 37.261 10.084 1.00 0.50 ATOM 136 O GLY 17 11.660 38.042 10.563 1.00 0.40 ATOM 138 N GLN 18 11.023 35.917 9.988 1.00 0.50 ATOM 139 CA GLN 18 12.164 35.132 10.419 1.00 0.40 ATOM 140 C GLN 18 12.596 35.421 11.834 1.00 0.60 ATOM 141 O GLN 18 13.786 35.521 12.159 1.00 0.40 ATOM 143 CB GLN 18 13.319 35.046 9.374 1.00 0.60 ATOM 144 CG GLN 18 13.017 34.286 8.099 1.00 0.40 ATOM 145 CD GLN 18 14.213 34.273 7.163 1.00 0.40 ATOM 146 OE1 GLN 18 15.071 35.156 7.215 1.00 0.40 ATOM 147 NE2 GLN 18 14.284 33.268 6.313 1.00 0.70 ATOM 148 N ASN 19 11.586 35.577 12.718 1.00 0.40 ATOM 149 CA ASN 19 11.821 35.861 14.098 1.00 0.40 ATOM 150 C ASN 19 11.743 34.619 14.899 1.00 0.40 ATOM 151 O ASN 19 10.895 33.755 14.660 1.00 0.60 ATOM 153 CB ASN 19 10.913 36.942 14.714 1.00 0.40 ATOM 154 CG ASN 19 11.150 38.286 14.092 1.00 0.70 ATOM 155 OD1 ASN 19 12.145 38.967 14.349 1.00 0.40 ATOM 156 ND2 ASN 19 10.227 38.723 13.238 1.00 0.60 ATOM 157 N TRP 20 12.690 34.500 15.849 1.00 0.70 ATOM 158 CA TRP 20 12.739 33.379 16.725 1.00 0.70 ATOM 159 C TRP 20 12.496 33.908 18.099 1.00 0.70 ATOM 160 O TRP 20 13.366 34.530 18.713 1.00 0.70 ATOM 162 CB TRP 20 14.073 32.591 16.671 1.00 0.40 ATOM 163 CG TRP 20 14.007 31.400 17.562 1.00 0.50 ATOM 164 CD1 TRP 20 13.573 30.143 17.186 1.00 0.50 ATOM 165 CD2 TRP 20 14.312 31.343 18.936 1.00 0.70 ATOM 166 NE1 TRP 20 13.601 29.296 18.278 1.00 0.50 ATOM 167 CE2 TRP 20 14.066 30.021 19.368 1.00 0.70 ATOM 168 CE3 TRP 20 14.807 32.261 19.883 1.00 0.40 ATOM 169 CZ2 TRP 20 14.258 29.627 20.704 1.00 0.50 ATOM 170 CZ3 TRP 20 14.992 31.857 21.196 1.00 0.40 ATOM 171 CH2 TRP 20 14.720 30.555 21.577 1.00 0.70 ATOM 172 N ALA 21 11.251 33.706 18.586 1.00 0.40 ATOM 173 CA ALA 21 10.893 34.111 19.910 1.00 0.50 ATOM 174 C ALA 21 11.214 32.922 20.757 1.00 0.50 ATOM 175 O ALA 21 10.924 31.784 20.383 1.00 0.70 ATOM 177 CB ALA 21 9.412 34.477 20.096 1.00 0.60 ATOM 178 N SER 22 11.832 33.188 21.930 1.00 0.50 ATOM 179 CA SER 22 12.216 32.167 22.872 1.00 0.60 ATOM 180 C SER 22 10.991 31.467 23.395 1.00 0.70 ATOM 181 O SER 22 11.001 30.255 23.607 1.00 0.70 ATOM 183 CB SER 22 13.055 32.760 24.025 1.00 0.50 ATOM 184 OG SER 22 12.312 33.718 24.766 1.00 0.40 ATOM 185 N LEU 23 9.904 32.247 23.592 1.00 0.50 ATOM 186 CA LEU 23 8.641 31.756 24.052 1.00 0.50 ATOM 187 C LEU 23 7.913 31.067 22.929 1.00 0.40 ATOM 188 O LEU 23 7.686 31.635 21.858 1.00 0.50 ATOM 190 CB LEU 23 7.750 32.899 24.594 1.00 0.70 ATOM 191 CG LEU 23 6.438 32.454 25.161 1.00 0.40 ATOM 192 CD1 LEU 23 6.693 31.606 26.389 1.00 0.70 ATOM 193 CD2 LEU 23 5.503 33.619 25.457 1.00 0.60 ATOM 194 N ALA 24 7.554 29.789 23.175 1.00 0.60 ATOM 195 CA ALA 24 6.803 28.969 22.261 1.00 0.70 ATOM 196 C ALA 24 5.370 29.391 22.411 1.00 0.60 ATOM 197 O ALA 24 4.932 29.761 23.504 1.00 0.70 ATOM 199 CB ALA 24 6.881 27.461 22.558 1.00 0.50 ATOM 200 N ALA 25 4.626 29.301 21.290 1.00 0.70 ATOM 201 CA ALA 25 3.243 29.697 21.174 1.00 0.70 ATOM 202 C ALA 25 3.080 31.172 21.447 1.00 0.70 ATOM 203 O ALA 25 2.091 31.616 22.039 1.00 0.70 ATOM 205 CB ALA 25 2.248 28.832 21.987 1.00 0.40 ATOM 206 N ASN 26 4.090 31.971 21.026 1.00 0.70 ATOM 207 CA ASN 26 4.089 33.399 21.140 1.00 0.60 ATOM 208 C ASN 26 3.270 33.853 19.969 1.00 0.60 ATOM 209 O ASN 26 3.371 33.301 18.869 1.00 0.60 ATOM 211 CB ASN 26 5.506 33.993 21.038 1.00 0.50 ATOM 212 CG ASN 26 5.518 35.483 21.303 1.00 0.60 ATOM 213 OD1 ASN 26 4.463 36.115 21.191 1.00 0.40 ATOM 214 ND2 ASN 26 6.686 35.999 21.613 1.00 0.50 ATOM 215 N GLU 27 2.392 34.842 20.209 1.00 0.40 ATOM 216 CA GLU 27 1.530 35.391 19.200 1.00 0.50 ATOM 217 C GLU 27 2.334 36.234 18.253 1.00 0.40 ATOM 218 O GLU 27 3.156 37.044 18.686 1.00 0.70 ATOM 220 CB GLU 27 0.431 36.303 19.772 1.00 0.70 ATOM 221 CG GLU 27 0.956 37.651 20.337 1.00 0.40 ATOM 222 CD GLU 27 1.561 37.645 21.709 1.00 0.60 ATOM 223 OE1 GLU 27 1.674 36.678 22.411 1.00 0.50 ATOM 224 OE2 GLU 27 1.957 38.755 22.106 1.00 0.60 ATOM 225 N LEU 28 2.116 36.044 16.931 1.00 0.60 ATOM 226 CA LEU 28 2.784 36.836 15.926 1.00 0.40 ATOM 227 C LEU 28 2.144 38.195 15.953 1.00 0.60 ATOM 228 O LEU 28 2.846 39.204 15.984 1.00 0.50 ATOM 230 CB LEU 28 2.681 36.229 14.516 1.00 0.50 ATOM 231 CG LEU 28 3.514 36.911 13.470 1.00 0.70 ATOM 232 CD1 LEU 28 4.027 35.876 12.489 1.00 0.50 ATOM 233 CD2 LEU 28 2.768 38.037 12.770 1.00 0.40 ATOM 234 N ARG 29 0.790 38.225 15.956 1.00 0.60 ATOM 235 CA ARG 29 0.030 39.444 16.039 1.00 0.50 ATOM 236 C ARG 29 -1.371 39.047 16.420 1.00 0.70 ATOM 237 O ARG 29 -1.870 37.998 16.005 1.00 0.50 ATOM 239 CB ARG 29 -0.036 40.278 14.732 1.00 0.60 ATOM 240 CG ARG 29 -0.756 41.555 14.845 1.00 0.60 ATOM 241 CD ARG 29 0.082 42.390 15.810 1.00 0.60 ATOM 242 NE ARG 29 -0.584 43.678 15.966 1.00 0.60 ATOM 243 CZ ARG 29 -1.570 43.893 16.835 1.00 0.60 ATOM 244 NH1 ARG 29 -2.045 42.877 17.558 1.00 0.60 ATOM 245 NH2 ARG 29 -2.089 45.113 16.909 1.00 0.40 ATOM 246 N VAL 30 -2.008 39.887 17.271 1.00 0.40 ATOM 247 CA VAL 30 -3.361 39.787 17.781 1.00 0.50 ATOM 248 C VAL 30 -3.922 41.183 17.957 1.00 0.40 ATOM 249 O VAL 30 -3.255 42.178 17.652 1.00 0.70 ATOM 251 CB VAL 30 -3.557 38.988 19.079 1.00 0.70 ATOM 252 CG1 VAL 30 -2.811 39.646 20.249 1.00 0.40 ATOM 253 CG2 VAL 30 -5.067 38.839 19.384 1.00 0.40 ATOM 254 N THR 31 -5.212 41.261 18.392 1.00 0.40 ATOM 255 CA THR 31 -6.004 42.438 18.677 1.00 0.60 ATOM 256 C THR 31 -6.504 43.194 17.490 1.00 0.70 ATOM 257 O THR 31 -7.699 43.124 17.191 1.00 0.40 ATOM 259 CB THR 31 -5.460 43.400 19.734 1.00 0.40 ATOM 260 OG1 THR 31 -5.407 42.819 21.031 1.00 0.50 ATOM 261 CG2 THR 31 -6.342 44.661 19.754 1.00 0.50 ATOM 262 N GLU 32 -5.609 43.900 16.749 1.00 0.60 ATOM 263 CA GLU 32 -5.996 44.684 15.603 1.00 0.70 ATOM 264 C GLU 32 -6.079 43.808 14.373 1.00 0.40 ATOM 265 O GLU 32 -5.419 43.917 13.397 1.00 0.40 ATOM 267 CB GLU 32 -4.983 45.803 15.249 1.00 0.70 ATOM 268 CG GLU 32 -4.895 46.925 16.313 1.00 0.70 ATOM 269 CD GLU 32 -3.939 48.049 16.053 1.00 0.50 ATOM 270 OE1 GLU 32 -3.117 48.070 15.178 1.00 0.40 ATOM 271 OE2 GLU 32 -4.046 49.011 16.833 1.00 0.40 ATOM 272 N ARG 33 -7.047 42.868 14.388 1.00 0.60 ATOM 273 CA ARG 33 -7.283 41.945 13.314 1.00 0.70 ATOM 274 C ARG 33 -7.725 42.537 11.996 1.00 0.50 ATOM 275 O ARG 33 -7.224 41.922 11.000 1.00 0.50 ATOM 277 CB ARG 33 -8.222 40.784 13.697 1.00 0.70 ATOM 278 CG ARG 33 -7.686 39.838 14.692 1.00 0.60 ATOM 279 CD ARG 33 -8.790 38.802 14.894 1.00 0.60 ATOM 280 NE ARG 33 -8.307 37.836 15.877 1.00 0.50 ATOM 281 CZ ARG 33 -9.024 36.792 16.288 1.00 0.40 ATOM 282 NH1 ARG 33 -10.277 36.643 15.860 1.00 0.40 ATOM 283 NH2 ARG 33 -8.476 35.960 17.168 1.00 0.50 ATOM 284 N PRO 34 -8.496 43.636 11.860 1.00 0.40 ATOM 285 CA PRO 34 -8.861 44.181 10.566 1.00 0.40 ATOM 286 C PRO 34 -7.698 44.809 9.844 1.00 0.60 ATOM 287 O PRO 34 -7.762 45.035 8.673 1.00 0.60 ATOM 288 CB PRO 34 -9.984 45.188 10.823 1.00 0.60 ATOM 289 CG PRO 34 -10.193 45.149 12.299 1.00 0.50 ATOM 290 CD PRO 34 -8.850 44.774 12.921 1.00 0.70 ATOM 291 N PHE 35 -6.650 45.265 10.579 1.00 0.40 ATOM 292 CA PHE 35 -5.463 45.813 9.973 1.00 0.60 ATOM 293 C PHE 35 -4.620 44.641 9.595 1.00 0.60 ATOM 294 O PHE 35 -4.507 43.652 10.163 1.00 0.60 ATOM 296 CB PHE 35 -4.577 46.598 10.953 1.00 0.50 ATOM 297 CG PHE 35 -5.145 47.860 11.546 1.00 0.40 ATOM 298 CD1 PHE 35 -5.040 49.070 10.833 1.00 0.50 ATOM 299 CD2 PHE 35 -5.795 47.883 12.761 1.00 0.60 ATOM 300 CE1 PHE 35 -5.484 50.242 11.412 1.00 0.70 ATOM 301 CE2 PHE 35 -6.266 49.025 13.351 1.00 0.50 ATOM 302 CZ PHE 35 -6.119 50.246 12.640 1.00 0.50 ATOM 303 N TRP 36 -4.039 44.698 8.378 1.00 0.40 ATOM 304 CA TRP 36 -3.258 43.595 7.922 1.00 0.40 ATOM 305 C TRP 36 -1.898 43.382 8.490 1.00 0.70 ATOM 306 O TRP 36 -1.200 44.287 8.953 1.00 0.70 ATOM 308 CB TRP 36 -3.360 43.275 6.426 1.00 0.60 ATOM 309 CG TRP 36 -4.738 42.829 6.066 1.00 0.50 ATOM 310 CD1 TRP 36 -5.739 43.646 5.571 1.00 0.60 ATOM 311 CD2 TRP 36 -5.290 41.544 6.228 1.00 0.50 ATOM 312 NE1 TRP 36 -6.899 42.913 5.410 1.00 0.50 ATOM 313 CE2 TRP 36 -6.638 41.608 5.804 1.00 0.70 ATOM 314 CE3 TRP 36 -4.799 40.300 6.665 1.00 0.70 ATOM 315 CZ2 TRP 36 -7.485 40.488 5.852 1.00 0.50 ATOM 316 CZ3 TRP 36 -5.648 39.203 6.705 1.00 0.50 ATOM 317 CH2 TRP 36 -6.964 39.317 6.296 1.00 0.60 ATOM 318 N ILE 37 -1.570 42.081 8.517 1.00 0.70 ATOM 319 CA ILE 37 -0.360 41.541 9.052 1.00 0.70 ATOM 320 C ILE 37 0.421 40.957 7.908 1.00 0.50 ATOM 321 O ILE 37 -0.122 40.599 6.862 1.00 0.70 ATOM 323 CB ILE 37 -0.681 40.390 10.015 1.00 0.70 ATOM 324 CG1 ILE 37 -1.443 40.821 11.262 1.00 0.40 ATOM 325 CG2 ILE 37 0.637 39.665 10.309 1.00 0.70 ATOM 326 CD1 ILE 37 -1.965 39.657 12.086 1.00 0.70 ATOM 327 N SER 38 1.754 40.942 8.084 1.00 0.60 ATOM 328 CA SER 38 2.654 40.341 7.154 1.00 0.60 ATOM 329 C SER 38 3.388 39.357 8.036 1.00 0.70 ATOM 330 O SER 38 4.064 39.747 8.986 1.00 0.40 ATOM 332 CB SER 38 3.572 41.367 6.485 1.00 0.70 ATOM 333 OG SER 38 4.379 40.682 5.530 1.00 0.70 ATOM 334 N SER 39 3.158 38.030 7.773 1.00 0.40 ATOM 335 CA SER 39 3.561 36.844 8.549 1.00 0.50 ATOM 336 C SER 39 3.754 35.592 7.640 1.00 0.50 ATOM 337 O SER 39 3.365 35.671 6.476 1.00 0.70 ATOM 339 CB SER 39 2.490 36.491 9.610 1.00 0.70 ATOM 340 OG SER 39 1.227 36.157 9.040 1.00 0.70 ATOM 341 N PHE 40 4.333 34.417 8.127 1.00 0.60 ATOM 342 CA PHE 40 4.698 33.222 7.316 1.00 0.50 ATOM 343 C PHE 40 4.977 31.952 8.161 1.00 0.70 ATOM 344 O PHE 40 5.863 31.995 9.016 1.00 0.40 ATOM 346 CB PHE 40 6.043 33.556 6.574 1.00 0.40 ATOM 347 CG PHE 40 6.583 32.534 5.638 1.00 0.60 ATOM 348 CD1 PHE 40 6.075 32.409 4.357 1.00 0.60 ATOM 349 CD2 PHE 40 7.649 31.686 6.039 1.00 0.60 ATOM 350 CE1 PHE 40 6.598 31.460 3.409 1.00 0.50 ATOM 351 CE2 PHE 40 8.172 30.729 5.101 1.00 0.70 ATOM 352 CZ PHE 40 7.663 30.644 3.815 1.00 0.60 ATOM 353 N ILE 41 4.283 30.778 7.936 1.00 0.70 ATOM 354 CA ILE 41 4.533 29.505 8.643 1.00 0.60 ATOM 355 C ILE 41 4.047 28.330 7.790 1.00 0.70 ATOM 356 O ILE 41 3.292 28.524 6.841 1.00 0.40 ATOM 358 CB ILE 41 3.909 29.522 10.054 1.00 0.50 ATOM 359 CG1 ILE 41 4.193 28.267 10.860 1.00 0.60 ATOM 360 CG2 ILE 41 2.423 29.841 9.881 1.00 0.70 ATOM 361 CD1 ILE 41 3.901 28.426 12.342 1.00 0.50 ATOM 362 N GLY 42 4.467 27.062 8.086 1.00 0.50 ATOM 363 CA GLY 42 4.006 25.891 7.359 1.00 0.50 ATOM 364 C GLY 42 4.304 24.686 8.186 1.00 0.50 ATOM 365 O GLY 42 5.132 24.755 9.096 1.00 0.50 ATOM 367 N ARG 43 3.651 23.525 7.909 1.00 0.40 ATOM 368 CA ARG 43 3.927 22.369 8.744 1.00 0.50 ATOM 369 C ARG 43 5.092 21.666 8.144 1.00 0.60 ATOM 370 O ARG 43 5.042 21.143 7.035 1.00 0.60 ATOM 372 CB ARG 43 2.764 21.435 9.107 1.00 0.50 ATOM 373 CG ARG 43 3.098 20.319 10.013 1.00 0.60 ATOM 374 CD ARG 43 1.792 19.552 10.214 1.00 0.50 ATOM 375 NE ARG 43 2.074 18.434 11.106 1.00 0.60 ATOM 376 CZ ARG 43 2.068 18.537 12.434 1.00 0.50 ATOM 377 NH1 ARG 43 1.875 19.728 13.001 1.00 0.40 ATOM 378 NH2 ARG 43 2.314 17.447 13.151 1.00 0.40 ATOM 379 N SER 44 6.202 21.687 8.908 1.00 0.70 ATOM 380 CA SER 44 7.522 21.325 8.442 1.00 0.50 ATOM 381 C SER 44 7.606 19.899 7.978 1.00 0.70 ATOM 382 O SER 44 8.311 19.598 7.016 1.00 0.40 ATOM 384 CB SER 44 8.617 21.631 9.496 1.00 0.70 ATOM 385 OG SER 44 8.441 20.892 10.703 1.00 0.70 ATOM 386 N LYS 45 6.865 19.000 8.657 1.00 0.40 ATOM 387 CA LYS 45 6.760 17.606 8.309 1.00 0.50 ATOM 388 C LYS 45 5.601 17.359 7.383 1.00 0.50 ATOM 389 O LYS 45 5.465 16.239 6.889 1.00 0.70 ATOM 391 CB LYS 45 6.561 16.721 9.565 1.00 0.70 ATOM 392 CG LYS 45 7.756 16.696 10.472 1.00 0.60 ATOM 393 CD LYS 45 7.516 15.829 11.668 1.00 0.40 ATOM 394 CE LYS 45 8.586 15.680 12.681 1.00 0.50 ATOM 395 NZ LYS 45 8.190 14.775 13.825 1.00 0.40 TER END