####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS281_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 4.93 14.56 LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.87 15.60 LCS_AVERAGE: 36.52 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.91 13.55 LCS_AVERAGE: 15.65 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.52 12.76 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.86 21.04 LONGEST_CONTINUOUS_SEGMENT: 4 11 - 14 0.84 21.40 LONGEST_CONTINUOUS_SEGMENT: 4 19 - 22 0.51 17.41 LONGEST_CONTINUOUS_SEGMENT: 4 21 - 24 0.86 18.56 LONGEST_CONTINUOUS_SEGMENT: 4 23 - 26 0.69 19.59 LONGEST_CONTINUOUS_SEGMENT: 4 32 - 35 0.57 14.78 LONGEST_CONTINUOUS_SEGMENT: 4 34 - 37 0.51 14.13 LONGEST_CONTINUOUS_SEGMENT: 4 35 - 38 0.86 14.22 LCS_AVERAGE: 8.06 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 4 5 6 6 6 11 12 13 14 15 16 17 19 20 22 23 25 25 LCS_GDT V 3 V 3 4 6 10 3 4 4 5 6 6 8 10 10 11 13 15 15 17 18 20 22 23 25 25 LCS_GDT Q 4 Q 4 4 6 13 3 4 4 5 7 8 9 10 10 11 13 13 15 16 18 19 21 21 23 24 LCS_GDT G 5 G 5 4 6 13 3 4 4 5 7 8 9 10 10 11 13 13 15 16 18 19 20 21 23 24 LCS_GDT P 6 P 6 4 6 13 0 3 4 5 6 6 6 8 9 10 13 13 14 16 18 19 20 21 23 24 LCS_GDT W 7 W 7 4 6 13 0 3 4 5 6 6 6 8 9 11 13 13 14 16 18 19 20 21 23 24 LCS_GDT V 8 V 8 4 5 13 1 3 5 5 5 7 7 8 9 11 13 13 15 16 18 19 20 21 23 24 LCS_GDT G 9 G 9 4 5 13 0 3 4 4 5 6 6 8 9 11 13 13 14 16 18 19 20 21 23 24 LCS_GDT S 10 S 10 3 5 13 1 3 5 5 5 6 6 8 9 11 13 13 14 14 15 17 19 21 23 24 LCS_GDT S 11 S 11 4 4 13 3 4 5 5 5 6 6 7 9 10 11 12 13 14 15 18 20 21 23 24 LCS_GDT Y 12 Y 12 4 4 13 3 4 5 5 5 5 6 6 9 10 11 12 12 14 15 15 20 21 23 24 LCS_GDT V 13 V 13 4 4 13 3 4 4 4 4 5 6 8 9 11 13 13 14 14 15 17 20 21 23 24 LCS_GDT A 14 A 14 4 4 17 3 4 4 4 4 6 7 8 9 11 13 15 15 16 16 18 20 21 23 24 LCS_GDT E 15 E 15 3 7 17 3 3 4 4 6 7 8 8 9 11 14 15 15 16 18 19 20 21 23 25 LCS_GDT T 16 T 16 3 7 17 3 3 4 5 7 8 9 11 13 13 14 15 15 16 18 19 20 21 25 25 LCS_GDT G 17 G 17 3 7 17 3 3 4 5 7 8 9 10 13 13 14 15 15 16 18 19 20 21 23 25 LCS_GDT Q 18 Q 18 3 7 17 0 3 4 4 6 7 8 8 12 13 14 15 15 16 18 19 20 22 25 25 LCS_GDT N 19 N 19 4 7 17 3 4 5 5 6 7 8 10 12 13 14 15 15 16 17 19 22 23 25 25 LCS_GDT W 20 W 20 4 7 17 3 4 5 5 6 7 8 10 12 13 14 15 15 16 17 19 22 23 25 25 LCS_GDT A 21 A 21 4 7 17 3 4 5 5 6 7 8 10 12 13 14 15 15 16 16 19 22 23 25 25 LCS_GDT S 22 S 22 4 4 17 3 4 5 5 6 7 8 10 12 13 14 15 15 16 16 17 19 20 22 23 LCS_GDT L 23 L 23 4 5 17 3 4 5 5 6 6 7 10 11 13 14 15 15 16 18 20 22 23 25 25 LCS_GDT A 24 A 24 4 5 18 3 4 4 4 6 6 7 9 9 9 11 12 15 17 19 20 22 23 25 25 LCS_GDT A 25 A 25 4 5 18 3 4 4 4 6 7 8 10 12 13 14 15 15 16 19 20 22 23 25 25 LCS_GDT N 26 N 26 4 5 18 3 4 4 5 6 7 8 10 12 13 15 15 17 17 19 20 22 23 25 25 LCS_GDT E 27 E 27 3 11 18 3 5 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT L 28 L 28 3 11 18 3 4 4 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT R 29 R 29 3 11 18 3 3 4 5 7 10 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT V 30 V 30 3 11 18 4 4 6 7 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT T 31 T 31 3 11 18 4 4 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT E 32 E 32 4 11 18 4 5 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT R 33 R 33 4 11 18 3 4 5 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT P 34 P 34 4 11 18 4 5 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT F 35 F 35 4 11 18 3 4 5 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT W 36 W 36 4 11 18 3 5 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT I 37 I 37 4 11 18 3 5 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT S 38 S 38 4 9 18 1 3 5 7 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 5 6 9 12 13 14 15 15 17 17 19 20 22 23 25 25 LCS_GDT F 40 F 40 3 4 18 3 3 3 4 4 6 7 9 11 14 15 15 17 17 19 20 20 23 25 25 LCS_GDT I 41 I 41 3 5 18 3 3 5 5 6 6 7 9 12 14 15 15 17 17 19 19 20 21 24 25 LCS_GDT G 42 G 42 3 5 18 3 3 5 5 6 6 7 9 11 12 13 15 17 17 17 18 19 20 20 24 LCS_GDT R 43 R 43 3 5 17 1 3 3 4 4 5 5 7 7 10 12 12 13 15 16 17 19 20 20 22 LCS_GDT S 44 S 44 3 5 15 1 3 3 4 4 5 5 6 7 9 11 11 13 13 13 15 16 17 20 22 LCS_GDT K 45 K 45 0 5 13 0 1 3 4 4 5 5 6 7 9 9 11 13 13 13 13 13 14 15 16 LCS_AVERAGE LCS_A: 20.08 ( 8.06 15.65 36.52 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 8 10 11 12 12 13 14 15 15 17 17 19 20 22 23 25 25 GDT PERCENT_AT 9.09 11.36 13.64 18.18 22.73 25.00 27.27 27.27 29.55 31.82 34.09 34.09 38.64 38.64 43.18 45.45 50.00 52.27 56.82 56.82 GDT RMS_LOCAL 0.09 0.69 0.84 1.27 1.64 1.85 2.06 2.06 2.70 3.27 3.50 3.50 4.41 4.41 5.04 5.46 6.22 6.46 6.83 7.01 GDT RMS_ALL_AT 15.95 13.42 13.34 13.27 13.43 13.81 13.90 13.90 14.41 15.20 15.31 15.31 15.77 15.77 14.20 13.58 13.29 13.34 13.25 13.47 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.588 0 0.095 0.140 9.050 0.000 0.000 - LGA V 3 V 3 9.601 0 0.057 0.099 11.105 0.000 0.000 11.105 LGA Q 4 Q 4 15.089 0 0.133 0.212 17.831 0.000 0.000 16.432 LGA G 5 G 5 19.955 0 0.197 0.197 19.955 0.000 0.000 - LGA P 6 P 6 20.788 0 0.673 0.541 24.705 0.000 0.000 24.705 LGA W 7 W 7 18.718 0 0.352 1.185 21.830 0.000 0.000 21.809 LGA V 8 V 8 17.762 0 0.670 0.859 19.129 0.000 0.000 18.077 LGA G 9 G 9 20.189 0 0.512 0.512 20.320 0.000 0.000 - LGA S 10 S 10 23.191 0 0.673 0.667 26.625 0.000 0.000 26.625 LGA S 11 S 11 19.940 0 0.579 0.568 20.666 0.000 0.000 17.387 LGA Y 12 Y 12 18.853 0 0.106 1.361 25.438 0.000 0.000 25.438 LGA V 13 V 13 18.908 0 0.627 1.481 22.037 0.000 0.000 22.037 LGA A 14 A 14 17.578 0 0.609 0.579 17.613 0.000 0.000 - LGA E 15 E 15 13.146 0 0.637 1.227 15.179 0.000 0.000 15.179 LGA T 16 T 16 11.205 0 0.549 1.015 12.008 0.000 0.000 11.053 LGA G 17 G 17 13.910 0 0.643 0.643 16.788 0.000 0.000 - LGA Q 18 Q 18 14.571 0 0.475 1.058 20.772 0.000 0.000 20.772 LGA N 19 N 19 16.275 0 0.642 0.552 19.420 0.000 0.000 19.165 LGA W 20 W 20 18.654 0 0.077 1.151 24.244 0.000 0.000 23.651 LGA A 21 A 21 17.425 0 0.663 0.613 18.074 0.000 0.000 - LGA S 22 S 22 21.215 0 0.027 0.051 23.791 0.000 0.000 23.791 LGA L 23 L 23 16.407 0 0.625 1.394 18.467 0.000 0.000 18.467 LGA A 24 A 24 12.435 0 0.641 0.611 14.230 0.000 0.000 - LGA A 25 A 25 11.039 0 0.391 0.383 13.117 0.000 0.000 - LGA N 26 N 26 8.070 0 0.647 0.829 13.197 0.000 0.000 10.903 LGA E 27 E 27 2.045 0 0.655 1.345 5.969 33.182 15.354 5.193 LGA L 28 L 28 1.621 0 0.298 1.189 4.268 52.273 45.909 1.555 LGA R 29 R 29 3.456 0 0.568 1.642 9.892 18.636 6.777 9.892 LGA V 30 V 30 2.850 0 0.272 1.038 7.598 45.455 25.974 6.560 LGA T 31 T 31 1.730 0 0.267 1.206 3.796 56.364 47.013 2.902 LGA E 32 E 32 0.562 0 0.318 0.854 3.445 70.000 49.697 3.175 LGA R 33 R 33 2.265 0 0.667 1.372 5.895 26.818 29.091 3.560 LGA P 34 P 34 0.588 0 0.661 0.537 3.137 56.364 44.675 3.059 LGA F 35 F 35 2.196 0 0.078 1.240 12.003 45.455 17.521 12.003 LGA W 36 W 36 0.392 0 0.075 1.306 6.637 78.636 35.584 6.637 LGA I 37 I 37 1.859 0 0.674 1.238 6.541 55.455 31.364 4.003 LGA S 38 S 38 2.590 0 0.654 0.849 5.359 23.636 20.303 5.359 LGA S 39 S 39 7.410 0 0.681 0.564 9.325 0.000 0.000 7.606 LGA F 40 F 40 8.196 0 0.683 0.948 12.618 0.000 0.000 12.618 LGA I 41 I 41 10.804 0 0.147 1.092 14.728 0.000 0.000 13.701 LGA G 42 G 42 15.807 0 0.668 0.668 16.853 0.000 0.000 - LGA R 43 R 43 18.086 0 0.228 1.153 21.106 0.000 0.000 18.598 LGA S 44 S 44 18.687 0 0.652 0.792 22.335 0.000 0.000 17.566 LGA K 45 K 45 19.324 0 0.602 0.760 21.830 0.000 0.000 13.122 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.416 11.296 12.287 12.779 8.392 3.740 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.06 25.568 23.799 0.556 LGA_LOCAL RMSD: 2.058 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.895 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.416 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.481854 * X + -0.819198 * Y + 0.311017 * Z + 51.168571 Y_new = -0.862578 * X + 0.505909 * Y + -0.003849 * Z + 52.901222 Z_new = -0.154193 * X + -0.270131 * Y + -0.950396 * Z + 86.319183 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.080234 0.154811 -2.864666 [DEG: -119.1886 8.8700 -164.1332 ] ZXZ: 1.558421 2.825305 -2.622915 [DEG: 89.2909 161.8780 -150.2819 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS281_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.06 23.799 11.42 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS281_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 10 N ALA 2 16.734 38.442 14.710 1.00 0.50 ATOM 11 CA ALA 2 16.417 37.791 15.959 1.00 0.40 ATOM 12 C ALA 2 15.541 38.679 16.786 1.00 0.70 ATOM 13 O ALA 2 15.824 39.868 16.964 1.00 0.60 ATOM 15 CB ALA 2 17.647 37.418 16.809 1.00 0.50 ATOM 16 N VAL 3 14.425 38.100 17.284 1.00 0.60 ATOM 17 CA VAL 3 13.474 38.806 18.089 1.00 0.70 ATOM 18 C VAL 3 13.703 38.394 19.521 1.00 0.60 ATOM 19 O VAL 3 13.605 37.212 19.869 1.00 0.40 ATOM 21 CB VAL 3 12.028 38.521 17.687 1.00 0.40 ATOM 22 CG1 VAL 3 11.026 39.193 18.645 1.00 0.70 ATOM 23 CG2 VAL 3 11.817 38.955 16.228 1.00 0.50 ATOM 24 N GLN 4 14.047 39.396 20.359 1.00 0.70 ATOM 25 CA GLN 4 14.272 39.217 21.766 1.00 0.50 ATOM 26 C GLN 4 13.255 40.125 22.368 1.00 0.60 ATOM 27 O GLN 4 13.331 41.350 22.235 1.00 0.60 ATOM 29 CB GLN 4 15.684 39.635 22.241 1.00 0.70 ATOM 30 CG GLN 4 16.849 38.798 21.742 1.00 0.60 ATOM 31 CD GLN 4 18.179 39.303 22.274 1.00 0.50 ATOM 32 OE1 GLN 4 18.322 40.479 22.616 1.00 0.70 ATOM 33 NE2 GLN 4 19.154 38.420 22.359 1.00 0.50 ATOM 34 N GLY 5 12.249 39.515 23.028 1.00 0.40 ATOM 35 CA GLY 5 11.163 40.228 23.629 1.00 0.50 ATOM 36 C GLY 5 10.109 40.152 22.558 1.00 0.40 ATOM 37 O GLY 5 10.332 40.706 21.479 1.00 0.40 ATOM 39 N PRO 6 8.942 39.575 22.827 1.00 0.40 ATOM 40 CA PRO 6 7.875 39.420 21.854 1.00 0.60 ATOM 41 C PRO 6 7.318 40.676 21.248 1.00 0.40 ATOM 42 O PRO 6 7.375 41.742 21.870 1.00 0.60 ATOM 43 CB PRO 6 6.791 38.597 22.554 1.00 0.40 ATOM 44 CG PRO 6 7.348 38.326 23.952 1.00 0.60 ATOM 45 CD PRO 6 8.812 38.088 23.662 1.00 0.50 ATOM 46 N TRP 7 6.793 40.537 20.010 1.00 0.40 ATOM 47 CA TRP 7 6.325 41.602 19.155 1.00 0.70 ATOM 48 C TRP 7 5.208 42.409 19.747 1.00 0.50 ATOM 49 O TRP 7 4.293 41.867 20.371 1.00 0.60 ATOM 51 CB TRP 7 5.736 41.079 17.825 1.00 0.60 ATOM 52 CG TRP 7 5.336 42.216 16.951 1.00 0.50 ATOM 53 CD1 TRP 7 4.036 42.629 16.721 1.00 0.60 ATOM 54 CD2 TRP 7 6.177 43.027 16.164 1.00 0.40 ATOM 55 NE1 TRP 7 4.034 43.679 15.822 1.00 0.60 ATOM 56 CE2 TRP 7 5.352 43.945 15.473 1.00 0.40 ATOM 57 CE3 TRP 7 7.567 43.120 15.968 1.00 0.40 ATOM 58 CZ2 TRP 7 5.880 44.896 14.583 1.00 0.50 ATOM 59 CZ3 TRP 7 8.074 44.066 15.089 1.00 0.50 ATOM 60 CH2 TRP 7 7.226 44.930 14.419 1.00 0.40 ATOM 61 N VAL 8 5.310 43.747 19.570 1.00 0.50 ATOM 62 CA VAL 8 4.333 44.696 20.029 1.00 0.50 ATOM 63 C VAL 8 4.382 45.881 19.082 1.00 0.50 ATOM 64 O VAL 8 5.436 46.181 18.505 1.00 0.60 ATOM 66 CB VAL 8 4.546 45.109 21.491 1.00 0.50 ATOM 67 CG1 VAL 8 5.896 45.830 21.694 1.00 0.60 ATOM 68 CG2 VAL 8 3.313 45.864 22.017 1.00 0.70 ATOM 69 N GLY 9 3.226 46.559 18.881 1.00 0.60 ATOM 70 CA GLY 9 3.190 47.722 18.033 1.00 0.50 ATOM 71 C GLY 9 1.960 47.883 17.208 1.00 0.70 ATOM 72 O GLY 9 1.391 46.927 16.671 1.00 0.40 ATOM 74 N SER 10 1.562 49.169 17.099 1.00 0.60 ATOM 75 CA SER 10 0.423 49.596 16.338 1.00 0.70 ATOM 76 C SER 10 1.033 50.275 15.148 1.00 0.40 ATOM 77 O SER 10 1.919 51.125 15.287 1.00 0.40 ATOM 79 CB SER 10 -0.486 50.587 17.094 1.00 0.50 ATOM 80 OG SER 10 0.213 51.784 17.409 1.00 0.70 ATOM 81 N SER 11 0.564 49.894 13.948 1.00 0.70 ATOM 82 CA SER 11 1.068 50.423 12.712 1.00 0.60 ATOM 83 C SER 11 0.027 50.332 11.632 1.00 0.40 ATOM 84 O SER 11 -1.039 49.759 11.851 1.00 0.70 ATOM 86 CB SER 11 2.344 49.667 12.265 1.00 0.70 ATOM 87 OG SER 11 2.881 50.237 11.075 1.00 0.60 ATOM 88 N TYR 12 0.300 50.957 10.460 1.00 0.60 ATOM 89 CA TYR 12 -0.620 50.947 9.351 1.00 0.40 ATOM 90 C TYR 12 -0.509 49.548 8.760 1.00 0.60 ATOM 91 O TYR 12 -1.521 48.896 8.496 1.00 0.50 ATOM 93 CB TYR 12 -0.263 51.983 8.253 1.00 0.40 ATOM 94 CG TYR 12 -0.407 53.373 8.844 1.00 0.60 ATOM 95 CD1 TYR 12 -1.611 54.043 8.889 1.00 0.60 ATOM 96 CD2 TYR 12 0.710 54.044 9.345 1.00 0.40 ATOM 97 CE1 TYR 12 -1.738 55.330 9.395 1.00 0.40 ATOM 98 CE2 TYR 12 0.628 55.346 9.813 1.00 0.60 ATOM 99 CZ TYR 12 -0.594 55.982 9.826 1.00 0.60 ATOM 100 OH TYR 12 -0.696 57.291 10.225 1.00 0.40 ATOM 101 N VAL 13 0.746 49.068 8.565 1.00 0.60 ATOM 102 CA VAL 13 1.049 47.751 8.046 1.00 0.70 ATOM 103 C VAL 13 2.112 47.234 8.984 1.00 0.70 ATOM 104 O VAL 13 3.028 47.975 9.354 1.00 0.40 ATOM 106 CB VAL 13 1.606 47.728 6.614 1.00 0.70 ATOM 107 CG1 VAL 13 0.597 48.352 5.619 1.00 0.40 ATOM 108 CG2 VAL 13 2.952 48.479 6.552 1.00 0.50 ATOM 109 N ALA 14 1.978 45.957 9.413 1.00 0.70 ATOM 110 CA ALA 14 2.955 45.371 10.293 1.00 0.60 ATOM 111 C ALA 14 3.553 44.172 9.635 1.00 0.70 ATOM 112 O ALA 14 2.858 43.177 9.402 1.00 0.60 ATOM 114 CB ALA 14 2.406 44.921 11.662 1.00 0.70 ATOM 115 N GLU 15 4.859 44.253 9.292 1.00 0.50 ATOM 116 CA GLU 15 5.519 43.151 8.659 1.00 0.50 ATOM 117 C GLU 15 6.330 42.460 9.716 1.00 0.50 ATOM 118 O GLU 15 7.176 43.069 10.377 1.00 0.50 ATOM 120 CB GLU 15 6.397 43.580 7.463 1.00 0.40 ATOM 121 CG GLU 15 7.064 42.397 6.716 1.00 0.50 ATOM 122 CD GLU 15 7.934 42.722 5.539 1.00 0.50 ATOM 123 OE1 GLU 15 8.157 43.828 5.127 1.00 0.70 ATOM 124 OE2 GLU 15 8.439 41.733 4.978 1.00 0.40 ATOM 125 N THR 16 6.047 41.153 9.898 1.00 0.50 ATOM 126 CA THR 16 6.721 40.341 10.874 1.00 0.60 ATOM 127 C THR 16 7.097 39.111 10.088 1.00 0.50 ATOM 128 O THR 16 6.341 38.138 10.018 1.00 0.50 ATOM 130 CB THR 16 5.820 39.993 12.051 1.00 0.60 ATOM 131 OG1 THR 16 5.475 41.170 12.771 1.00 0.50 ATOM 132 CG2 THR 16 6.559 39.037 13.007 1.00 0.50 ATOM 133 N GLY 17 8.295 39.141 9.461 1.00 0.70 ATOM 134 CA GLY 17 8.740 38.026 8.668 1.00 0.60 ATOM 135 C GLY 17 10.055 37.511 9.136 1.00 0.40 ATOM 136 O GLY 17 10.914 38.279 9.580 1.00 0.70 ATOM 138 N GLN 18 10.218 36.168 9.012 1.00 0.40 ATOM 139 CA GLN 18 11.369 35.366 9.364 1.00 0.50 ATOM 140 C GLN 18 11.944 35.644 10.733 1.00 0.40 ATOM 141 O GLN 18 13.159 35.685 10.948 1.00 0.50 ATOM 143 CB GLN 18 12.439 35.233 8.233 1.00 0.60 ATOM 144 CG GLN 18 11.958 34.453 7.040 1.00 0.70 ATOM 145 CD GLN 18 13.000 34.339 5.969 1.00 0.40 ATOM 146 OE1 GLN 18 13.899 35.204 5.893 1.00 0.70 ATOM 147 NE2 GLN 18 12.885 33.384 5.054 1.00 0.70 ATOM 148 N ASN 19 11.025 35.859 11.698 1.00 0.40 ATOM 149 CA ASN 19 11.409 36.124 13.052 1.00 0.40 ATOM 150 C ASN 19 11.342 34.915 13.901 1.00 0.50 ATOM 151 O ASN 19 10.446 34.075 13.749 1.00 0.40 ATOM 153 CB ASN 19 10.643 37.263 13.745 1.00 0.50 ATOM 154 CG ASN 19 10.912 38.591 13.098 1.00 0.40 ATOM 155 OD1 ASN 19 10.014 39.274 12.599 1.00 0.50 ATOM 156 ND2 ASN 19 12.176 39.008 13.081 1.00 0.60 ATOM 157 N TRP 20 12.346 34.784 14.782 1.00 0.50 ATOM 158 CA TRP 20 12.408 33.683 15.687 1.00 0.60 ATOM 159 C TRP 20 12.275 34.261 17.060 1.00 0.70 ATOM 160 O TRP 20 13.176 34.935 17.563 1.00 0.70 ATOM 162 CB TRP 20 13.703 32.840 15.573 1.00 0.40 ATOM 163 CG TRP 20 13.648 31.678 16.500 1.00 0.70 ATOM 164 CD1 TRP 20 14.345 31.570 17.690 1.00 0.40 ATOM 165 CD2 TRP 20 12.940 30.474 16.321 1.00 0.60 ATOM 166 NE1 TRP 20 14.090 30.341 18.267 1.00 0.50 ATOM 167 CE2 TRP 20 13.216 29.651 17.439 1.00 0.50 ATOM 168 CE3 TRP 20 12.057 29.975 15.345 1.00 0.40 ATOM 169 CZ2 TRP 20 12.672 28.361 17.566 1.00 0.50 ATOM 170 CZ3 TRP 20 11.528 28.702 15.485 1.00 0.70 ATOM 171 CH2 TRP 20 11.841 27.927 16.587 1.00 0.60 ATOM 172 N ALA 21 11.090 34.042 17.668 1.00 0.40 ATOM 173 CA ALA 21 10.845 34.492 19.006 1.00 0.40 ATOM 174 C ALA 21 11.294 33.354 19.860 1.00 0.70 ATOM 175 O ALA 21 10.966 32.192 19.591 1.00 0.60 ATOM 177 CB ALA 21 9.376 34.808 19.319 1.00 0.40 ATOM 178 N SER 22 12.065 33.684 20.920 1.00 0.70 ATOM 179 CA SER 22 12.587 32.719 21.853 1.00 0.50 ATOM 180 C SER 22 11.452 32.000 22.535 1.00 0.70 ATOM 181 O SER 22 11.544 30.803 22.813 1.00 0.70 ATOM 183 CB SER 22 13.521 33.390 22.887 1.00 0.60 ATOM 184 OG SER 22 12.820 34.356 23.667 1.00 0.50 ATOM 185 N LEU 23 10.353 32.743 22.795 1.00 0.50 ATOM 186 CA LEU 23 9.164 32.226 23.405 1.00 0.60 ATOM 187 C LEU 23 8.383 31.446 22.380 1.00 0.40 ATOM 188 O LEU 23 8.034 31.952 21.307 1.00 0.50 ATOM 190 CB LEU 23 8.281 33.359 23.969 1.00 0.50 ATOM 191 CG LEU 23 7.048 32.897 24.686 1.00 0.40 ATOM 192 CD1 LEU 23 7.453 32.131 25.928 1.00 0.50 ATOM 193 CD2 LEU 23 6.095 34.040 25.009 1.00 0.70 ATOM 194 N ALA 24 8.118 30.165 22.711 1.00 0.70 ATOM 195 CA ALA 24 7.328 29.284 21.888 1.00 0.40 ATOM 196 C ALA 24 5.901 29.686 22.126 1.00 0.50 ATOM 197 O ALA 24 5.540 30.106 23.229 1.00 0.70 ATOM 199 CB ALA 24 7.473 27.798 22.249 1.00 0.70 ATOM 200 N ALA 25 5.065 29.541 21.078 1.00 0.40 ATOM 201 CA ALA 25 3.670 29.897 21.072 1.00 0.70 ATOM 202 C ALA 25 3.492 31.381 21.284 1.00 0.60 ATOM 203 O ALA 25 2.527 31.834 21.908 1.00 0.60 ATOM 205 CB ALA 25 2.777 29.052 22.017 1.00 0.60 ATOM 206 N ASN 26 4.464 32.186 20.787 1.00 0.70 ATOM 207 CA ASN 26 4.418 33.620 20.859 1.00 0.70 ATOM 208 C ASN 26 3.530 34.020 19.719 1.00 0.50 ATOM 209 O ASN 26 3.652 33.508 18.606 1.00 0.50 ATOM 211 CB ASN 26 5.779 34.318 20.694 1.00 0.70 ATOM 212 CG ASN 26 5.675 35.816 20.851 1.00 0.50 ATOM 213 OD1 ASN 26 4.799 36.276 21.595 1.00 0.60 ATOM 214 ND2 ASN 26 6.525 36.531 20.147 1.00 0.40 ATOM 215 N GLU 27 2.583 34.924 20.009 1.00 0.70 ATOM 216 CA GLU 27 1.631 35.412 19.053 1.00 0.40 ATOM 217 C GLU 27 2.297 36.315 18.058 1.00 0.70 ATOM 218 O GLU 27 3.125 37.154 18.425 1.00 0.40 ATOM 220 CB GLU 27 0.509 36.245 19.700 1.00 0.50 ATOM 221 CG GLU 27 -0.407 35.440 20.659 1.00 0.40 ATOM 222 CD GLU 27 0.045 35.277 22.079 1.00 0.70 ATOM 223 OE1 GLU 27 1.062 35.720 22.538 1.00 0.50 ATOM 224 OE2 GLU 27 -0.730 34.620 22.797 1.00 0.40 ATOM 225 N LEU 28 1.956 36.132 16.759 1.00 0.50 ATOM 226 CA LEU 28 2.466 36.973 15.701 1.00 0.50 ATOM 227 C LEU 28 1.833 38.325 15.898 1.00 0.60 ATOM 228 O LEU 28 2.537 39.335 15.926 1.00 0.50 ATOM 230 CB LEU 28 2.109 36.427 14.302 1.00 0.70 ATOM 231 CG LEU 28 2.765 37.145 13.162 1.00 0.50 ATOM 232 CD1 LEU 28 3.083 36.149 12.066 1.00 0.40 ATOM 233 CD2 LEU 28 1.931 38.310 12.645 1.00 0.50 ATOM 234 N ARG 29 0.488 38.355 16.068 1.00 0.50 ATOM 235 CA ARG 29 -0.241 39.564 16.328 1.00 0.40 ATOM 236 C ARG 29 -1.631 39.150 16.736 1.00 0.60 ATOM 237 O ARG 29 -2.150 38.124 16.284 1.00 0.70 ATOM 239 CB ARG 29 -0.359 40.517 15.122 1.00 0.60 ATOM 240 CG ARG 29 -1.045 41.794 15.389 1.00 0.60 ATOM 241 CD ARG 29 -0.147 42.529 16.383 1.00 0.60 ATOM 242 NE ARG 29 -0.781 43.807 16.684 1.00 0.50 ATOM 243 CZ ARG 29 -1.720 43.957 17.616 1.00 0.40 ATOM 244 NH1 ARG 29 -2.175 42.887 18.267 1.00 0.70 ATOM 245 NH2 ARG 29 -2.213 45.173 17.825 1.00 0.50 ATOM 246 N VAL 30 -2.233 39.949 17.648 1.00 0.40 ATOM 247 CA VAL 30 -3.569 39.830 18.199 1.00 0.50 ATOM 248 C VAL 30 -4.177 41.216 18.328 1.00 0.60 ATOM 249 O VAL 30 -3.573 42.206 17.905 1.00 0.50 ATOM 251 CB VAL 30 -3.678 39.117 19.557 1.00 0.60 ATOM 252 CG1 VAL 30 -2.922 39.902 20.635 1.00 0.70 ATOM 253 CG2 VAL 30 -5.163 38.924 19.938 1.00 0.70 ATOM 254 N THR 31 -5.453 41.271 18.794 1.00 0.40 ATOM 255 CA THR 31 -6.286 42.429 19.047 1.00 0.50 ATOM 256 C THR 31 -6.698 43.189 17.826 1.00 0.50 ATOM 257 O THR 31 -7.858 43.216 17.473 1.00 0.70 ATOM 259 CB THR 31 -5.843 43.387 20.156 1.00 0.60 ATOM 260 OG1 THR 31 -5.871 42.786 21.445 1.00 0.70 ATOM 261 CG2 THR 31 -6.747 44.631 20.130 1.00 0.60 ATOM 262 N GLU 32 -5.737 43.845 17.137 1.00 0.70 ATOM 263 CA GLU 32 -6.037 44.623 15.967 1.00 0.60 ATOM 264 C GLU 32 -6.043 43.724 14.768 1.00 0.50 ATOM 265 O GLU 32 -5.128 43.793 13.913 1.00 0.40 ATOM 267 CB GLU 32 -5.112 45.840 15.774 1.00 0.40 ATOM 268 CG GLU 32 -5.278 46.940 16.856 1.00 0.70 ATOM 269 CD GLU 32 -4.416 48.160 16.745 1.00 0.50 ATOM 270 OE1 GLU 32 -3.491 48.288 15.990 1.00 0.60 ATOM 271 OE2 GLU 32 -4.722 49.085 17.519 1.00 0.50 ATOM 272 N ARG 33 -7.102 42.890 14.685 1.00 0.60 ATOM 273 CA ARG 33 -7.299 41.966 13.603 1.00 0.40 ATOM 274 C ARG 33 -7.580 42.558 12.240 1.00 0.50 ATOM 275 O ARG 33 -6.910 41.934 11.321 1.00 0.40 ATOM 277 CB ARG 33 -8.379 40.886 13.812 1.00 0.70 ATOM 278 CG ARG 33 -8.082 39.888 14.856 1.00 0.60 ATOM 279 CD ARG 33 -9.288 38.949 14.862 1.00 0.40 ATOM 280 NE ARG 33 -9.044 37.937 15.885 1.00 0.70 ATOM 281 CZ ARG 33 -9.897 36.953 16.161 1.00 0.50 ATOM 282 NH1 ARG 33 -11.078 36.915 15.541 1.00 0.40 ATOM 283 NH2 ARG 33 -9.563 36.071 17.095 1.00 0.50 ATOM 284 N PRO 34 -8.394 43.599 12.004 1.00 0.60 ATOM 285 CA PRO 34 -8.631 44.101 10.663 1.00 0.40 ATOM 286 C PRO 34 -7.404 44.578 9.935 1.00 0.70 ATOM 287 O PRO 34 -7.447 44.687 8.735 1.00 0.60 ATOM 288 CB PRO 34 -9.758 45.152 10.817 1.00 0.40 ATOM 289 CG PRO 34 -10.058 45.143 12.273 1.00 0.40 ATOM 290 CD PRO 34 -8.771 44.753 12.997 1.00 0.70 ATOM 291 N PHE 35 -6.344 45.029 10.651 1.00 0.40 ATOM 292 CA PHE 35 -5.176 45.587 10.008 1.00 0.50 ATOM 293 C PHE 35 -4.332 44.482 9.432 1.00 0.60 ATOM 294 O PHE 35 -4.119 43.477 10.141 1.00 0.70 ATOM 296 CB PHE 35 -4.318 46.428 10.977 1.00 0.50 ATOM 297 CG PHE 35 -4.936 47.682 11.530 1.00 0.50 ATOM 298 CD1 PHE 35 -4.866 48.875 10.785 1.00 0.60 ATOM 299 CD2 PHE 35 -5.590 47.715 12.741 1.00 0.60 ATOM 300 CE1 PHE 35 -5.351 50.047 11.330 1.00 0.60 ATOM 301 CE2 PHE 35 -6.102 48.856 13.300 1.00 0.70 ATOM 302 CZ PHE 35 -5.992 50.062 12.556 1.00 0.50 ATOM 303 N TRP 36 -3.848 44.627 8.165 1.00 0.60 ATOM 304 CA TRP 36 -3.011 43.599 7.594 1.00 0.70 ATOM 305 C TRP 36 -1.655 43.413 8.155 1.00 0.50 ATOM 306 O TRP 36 -0.919 44.335 8.506 1.00 0.50 ATOM 308 CB TRP 36 -2.914 43.405 6.070 1.00 0.70 ATOM 309 CG TRP 36 -2.356 44.625 5.419 1.00 0.70 ATOM 310 CD1 TRP 36 -3.099 45.694 4.951 1.00 0.50 ATOM 311 CD2 TRP 36 -1.008 44.884 5.103 1.00 0.60 ATOM 312 NE1 TRP 36 -2.259 46.618 4.358 1.00 0.40 ATOM 313 CE2 TRP 36 -0.961 46.138 4.451 1.00 0.40 ATOM 314 CE3 TRP 36 0.209 44.212 5.318 1.00 0.70 ATOM 315 CZ2 TRP 36 0.245 46.688 3.986 1.00 0.50 ATOM 316 CZ3 TRP 36 1.392 44.770 4.855 1.00 0.60 ATOM 317 CH2 TRP 36 1.387 45.990 4.206 1.00 0.70 ATOM 318 N ILE 37 -1.378 42.101 8.269 1.00 0.40 ATOM 319 CA ILE 37 -0.102 41.561 8.635 1.00 0.50 ATOM 320 C ILE 37 0.529 40.857 7.465 1.00 0.50 ATOM 321 O ILE 37 -0.230 40.242 6.632 1.00 0.60 ATOM 323 CB ILE 37 -0.268 40.647 9.868 1.00 0.50 ATOM 324 CG1 ILE 37 -1.168 39.449 9.622 1.00 0.40 ATOM 325 CG2 ILE 37 -0.707 41.543 11.027 1.00 0.60 ATOM 326 CD1 ILE 37 -1.135 38.434 10.751 1.00 0.70 ATOM 327 N SER 38 1.871 40.970 7.422 1.00 0.50 ATOM 328 CA SER 38 2.668 40.353 6.407 1.00 0.70 ATOM 329 C SER 38 3.581 39.427 7.171 1.00 0.40 ATOM 330 O SER 38 4.417 39.929 7.957 1.00 0.60 ATOM 332 CB SER 38 3.476 41.375 5.593 1.00 0.40 ATOM 333 OG SER 38 4.188 40.699 4.563 1.00 0.50 ATOM 334 N SER 39 3.398 38.097 6.994 1.00 0.60 ATOM 335 CA SER 39 4.171 37.078 7.647 1.00 0.40 ATOM 336 C SER 39 4.086 35.774 6.893 1.00 0.50 ATOM 337 O SER 39 3.195 35.522 6.122 1.00 0.70 ATOM 339 CB SER 39 3.695 36.816 9.088 1.00 0.70 ATOM 340 OG SER 39 2.351 36.346 9.123 1.00 0.60 ATOM 341 N PHE 40 5.184 34.975 6.926 1.00 0.50 ATOM 342 CA PHE 40 5.257 33.703 6.249 1.00 0.40 ATOM 343 C PHE 40 5.966 32.716 7.131 1.00 0.40 ATOM 344 O PHE 40 7.054 33.124 7.692 1.00 0.40 ATOM 346 CB PHE 40 5.927 33.829 4.852 1.00 0.70 ATOM 347 CG PHE 40 5.904 32.487 4.176 1.00 0.50 ATOM 348 CD1 PHE 40 4.743 32.049 3.552 1.00 0.60 ATOM 349 CD2 PHE 40 6.983 31.639 4.242 1.00 0.40 ATOM 350 CE1 PHE 40 4.671 30.760 3.006 1.00 0.40 ATOM 351 CE2 PHE 40 6.912 30.351 3.716 1.00 0.60 ATOM 352 CZ PHE 40 5.749 29.928 3.106 1.00 0.60 ATOM 353 N ILE 41 5.472 31.462 7.143 1.00 0.70 ATOM 354 CA ILE 41 6.078 30.396 7.897 1.00 0.40 ATOM 355 C ILE 41 5.764 29.128 7.150 1.00 0.40 ATOM 356 O ILE 41 4.764 29.050 6.432 1.00 0.70 ATOM 358 CB ILE 41 5.648 30.338 9.367 1.00 0.40 ATOM 359 CG1 ILE 41 6.348 29.253 10.175 1.00 0.50 ATOM 360 CG2 ILE 41 4.117 30.244 9.390 1.00 0.40 ATOM 361 CD1 ILE 41 6.200 29.424 11.676 1.00 0.50 ATOM 362 N GLY 42 6.626 28.106 7.288 1.00 0.70 ATOM 363 CA GLY 42 6.332 26.893 6.605 1.00 0.70 ATOM 364 C GLY 42 7.117 25.754 7.112 1.00 0.60 ATOM 365 O GLY 42 8.248 25.885 7.582 1.00 0.70 ATOM 367 N ARG 43 6.444 24.595 7.047 1.00 0.50 ATOM 368 CA ARG 43 7.025 23.374 7.450 1.00 0.60 ATOM 369 C ARG 43 7.375 22.744 6.160 1.00 0.40 ATOM 370 O ARG 43 6.573 22.091 5.488 1.00 0.70 ATOM 372 CB ARG 43 6.191 22.461 8.378 1.00 0.50 ATOM 373 CG ARG 43 5.851 23.038 9.688 1.00 0.50 ATOM 374 CD ARG 43 7.182 23.140 10.432 1.00 0.70 ATOM 375 NE ARG 43 6.905 23.709 11.745 1.00 0.70 ATOM 376 CZ ARG 43 7.846 23.937 12.659 1.00 0.50 ATOM 377 NH1 ARG 43 9.103 23.560 12.415 1.00 0.60 ATOM 378 NH2 ARG 43 7.485 24.482 13.814 1.00 0.40 ATOM 379 N SER 44 8.633 23.052 5.791 1.00 0.50 ATOM 380 CA SER 44 9.346 22.591 4.637 1.00 0.40 ATOM 381 C SER 44 9.882 21.234 4.997 1.00 0.50 ATOM 382 O SER 44 10.233 20.451 4.115 1.00 0.60 ATOM 384 CB SER 44 10.514 23.516 4.266 1.00 0.60 ATOM 385 OG SER 44 11.454 23.545 5.333 1.00 0.50 ATOM 386 N LYS 45 9.973 20.947 6.333 1.00 0.70 ATOM 387 CA LYS 45 10.398 19.693 6.900 1.00 0.60 ATOM 388 C LYS 45 9.389 18.695 6.405 1.00 0.40 ATOM 389 O LYS 45 9.758 17.571 6.064 1.00 0.50 ATOM 391 CB LYS 45 10.311 19.658 8.437 1.00 0.40 ATOM 392 CG LYS 45 11.277 20.587 9.120 1.00 0.50 ATOM 393 CD LYS 45 11.152 20.518 10.612 1.00 0.70 ATOM 394 CE LYS 45 12.027 21.365 11.452 1.00 0.60 ATOM 395 NZ LYS 45 11.781 21.181 12.931 1.00 0.60 TER END