####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS281_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 24 - 41 4.96 14.56 LONGEST_CONTINUOUS_SEGMENT: 18 25 - 42 4.82 15.64 LONGEST_CONTINUOUS_SEGMENT: 18 26 - 43 4.92 16.40 LCS_AVERAGE: 36.78 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.88 13.64 LCS_AVERAGE: 15.29 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.55 13.21 LONGEST_CONTINUOUS_SEGMENT: 4 6 - 9 0.86 19.64 LONGEST_CONTINUOUS_SEGMENT: 4 11 - 14 0.78 20.26 LONGEST_CONTINUOUS_SEGMENT: 4 19 - 22 0.50 16.65 LONGEST_CONTINUOUS_SEGMENT: 4 21 - 24 0.75 18.83 LONGEST_CONTINUOUS_SEGMENT: 4 23 - 26 0.70 18.95 LONGEST_CONTINUOUS_SEGMENT: 4 28 - 31 0.95 15.26 LONGEST_CONTINUOUS_SEGMENT: 4 32 - 35 0.59 15.13 LONGEST_CONTINUOUS_SEGMENT: 4 34 - 37 0.56 13.86 LONGEST_CONTINUOUS_SEGMENT: 4 35 - 38 0.95 14.22 LCS_AVERAGE: 8.26 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 5 5 6 7 7 8 9 12 13 14 15 16 19 19 21 23 25 25 LCS_GDT V 3 V 3 4 6 13 3 4 5 5 6 8 9 10 10 12 13 14 15 17 19 19 21 23 25 25 LCS_GDT Q 4 Q 4 4 6 13 4 4 5 5 6 8 9 10 10 11 13 14 15 17 19 19 21 23 25 25 LCS_GDT G 5 G 5 4 6 13 3 4 5 5 6 7 9 10 10 12 13 14 15 17 19 19 21 23 25 25 LCS_GDT P 6 P 6 4 6 13 0 3 4 5 6 7 7 8 9 12 13 13 14 15 17 19 21 23 25 25 LCS_GDT W 7 W 7 4 6 13 1 3 4 5 6 7 7 8 9 12 13 13 14 15 17 19 21 23 25 25 LCS_GDT V 8 V 8 4 5 13 1 3 4 5 5 5 7 8 9 12 13 13 15 17 19 19 21 23 25 25 LCS_GDT G 9 G 9 4 5 13 1 3 4 4 6 6 7 8 9 12 13 13 15 17 19 19 21 23 25 25 LCS_GDT S 10 S 10 3 5 13 1 3 3 4 6 6 7 8 9 12 13 13 14 14 16 17 19 23 25 25 LCS_GDT S 11 S 11 4 4 13 3 4 4 4 6 6 6 8 9 10 11 12 13 14 18 19 19 23 25 25 LCS_GDT Y 12 Y 12 4 4 13 3 4 4 4 4 5 6 7 8 10 10 11 16 17 18 19 19 23 25 25 LCS_GDT V 13 V 13 4 4 13 3 4 4 4 4 5 7 8 9 12 13 15 16 17 19 19 21 23 25 25 LCS_GDT A 14 A 14 4 4 17 3 4 4 4 6 6 7 8 9 13 13 15 16 17 19 19 21 23 25 25 LCS_GDT E 15 E 15 3 6 17 3 3 3 4 6 9 9 10 13 14 15 16 16 17 19 19 21 23 25 25 LCS_GDT T 16 T 16 3 6 17 3 4 5 5 6 9 9 10 13 14 15 16 16 17 19 19 21 23 25 25 LCS_GDT G 17 G 17 3 6 17 4 4 4 5 6 8 9 10 13 14 15 16 16 17 19 19 21 23 25 25 LCS_GDT Q 18 Q 18 3 6 17 0 3 3 4 6 6 8 9 12 13 15 16 16 17 18 19 20 22 24 25 LCS_GDT N 19 N 19 4 6 17 3 4 4 5 6 7 9 10 13 13 15 16 16 17 18 19 20 22 24 25 LCS_GDT W 20 W 20 4 6 17 3 4 4 5 6 7 9 10 13 13 15 16 16 17 18 19 20 22 24 25 LCS_GDT A 21 A 21 4 6 17 3 4 4 5 6 6 8 10 13 13 15 16 16 17 18 19 19 22 24 25 LCS_GDT S 22 S 22 4 4 17 3 4 4 5 6 7 9 10 13 13 15 16 16 17 18 18 19 21 22 24 LCS_GDT L 23 L 23 4 5 17 3 4 4 5 5 6 8 10 13 13 15 16 16 17 18 19 20 22 24 25 LCS_GDT A 24 A 24 4 5 18 3 4 4 5 5 5 7 9 9 10 12 14 15 17 18 19 19 22 24 25 LCS_GDT A 25 A 25 4 5 18 3 4 4 5 6 7 9 10 13 13 15 16 16 17 18 19 19 22 24 25 LCS_GDT N 26 N 26 4 5 18 3 4 4 5 6 7 9 10 13 13 15 16 17 17 18 19 20 22 24 25 LCS_GDT E 27 E 27 3 11 18 3 3 6 9 10 11 12 12 13 15 15 16 17 17 19 19 21 22 25 25 LCS_GDT L 28 L 28 4 11 18 4 4 6 9 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT R 29 R 29 4 11 18 3 3 4 5 7 10 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT V 30 V 30 4 11 18 4 5 6 7 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT T 31 T 31 4 11 18 4 5 6 9 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT E 32 E 32 4 11 18 4 5 6 9 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT R 33 R 33 4 11 18 2 4 5 9 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT P 34 P 34 4 11 18 4 5 6 9 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 LCS_GDT F 35 F 35 4 11 18 3 4 5 9 10 11 12 12 13 15 15 16 17 17 19 19 21 22 25 25 LCS_GDT W 36 W 36 4 11 18 4 4 6 9 10 11 12 12 13 15 15 16 17 17 18 19 20 22 24 25 LCS_GDT I 37 I 37 4 11 18 3 5 6 9 10 11 12 12 13 15 15 16 17 17 18 19 20 22 24 25 LCS_GDT S 38 S 38 4 9 18 1 3 5 7 9 11 12 12 13 15 15 16 17 17 17 19 20 22 24 25 LCS_GDT S 39 S 39 3 4 18 0 3 3 4 5 8 9 12 13 15 15 16 17 17 17 19 20 22 24 25 LCS_GDT F 40 F 40 3 4 18 3 3 3 4 5 5 7 9 13 15 15 16 17 17 18 19 20 22 24 25 LCS_GDT I 41 I 41 3 5 18 3 3 3 4 4 6 8 11 13 15 15 16 17 17 18 19 19 21 23 25 LCS_GDT G 42 G 42 3 5 18 3 3 3 5 5 5 7 9 13 13 15 16 17 17 18 18 19 21 21 24 LCS_GDT R 43 R 43 3 5 18 1 3 3 4 4 5 5 6 7 8 11 14 15 15 16 17 19 21 21 22 LCS_GDT S 44 S 44 3 5 16 1 3 3 4 4 5 5 6 7 8 11 11 13 14 15 16 17 18 21 22 LCS_GDT K 45 K 45 0 5 13 0 1 3 4 4 5 5 6 7 8 8 10 11 12 12 13 14 15 16 16 LCS_AVERAGE LCS_A: 20.11 ( 8.26 15.29 36.78 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 6 9 10 11 12 12 13 15 15 16 17 17 19 19 21 23 25 25 GDT PERCENT_AT 9.09 11.36 13.64 20.45 22.73 25.00 27.27 27.27 29.55 34.09 34.09 36.36 38.64 38.64 43.18 43.18 47.73 52.27 56.82 56.82 GDT RMS_LOCAL 0.10 0.64 0.85 1.41 1.59 1.86 2.08 2.08 2.70 3.45 3.45 3.89 4.32 4.18 5.41 4.87 5.87 6.54 6.75 6.75 GDT RMS_ALL_AT 15.74 14.17 14.25 13.51 13.47 13.87 13.98 13.98 14.49 15.42 15.42 15.65 15.86 15.45 12.22 14.18 12.07 12.42 12.36 12.36 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.355 0 0.094 0.140 12.166 0.000 0.000 - LGA V 3 V 3 12.456 0 0.063 0.109 14.242 0.000 0.000 13.294 LGA Q 4 Q 4 18.463 0 0.131 0.207 21.125 0.000 0.000 21.125 LGA G 5 G 5 22.375 0 0.216 0.216 22.375 0.000 0.000 - LGA P 6 P 6 22.549 0 0.672 0.626 26.586 0.000 0.000 26.586 LGA W 7 W 7 19.668 0 0.349 1.186 22.549 0.000 0.000 22.549 LGA V 8 V 8 17.511 0 0.665 0.865 18.532 0.000 0.000 17.888 LGA G 9 G 9 19.183 0 0.513 0.513 19.183 0.000 0.000 - LGA S 10 S 10 21.027 0 0.658 0.650 24.351 0.000 0.000 24.351 LGA S 11 S 11 17.247 0 0.624 0.590 18.090 0.000 0.000 14.630 LGA Y 12 Y 12 15.832 0 0.091 1.307 22.007 0.000 0.000 22.007 LGA V 13 V 13 16.300 0 0.614 1.477 19.469 0.000 0.000 19.469 LGA A 14 A 14 14.902 0 0.594 0.559 14.902 0.000 0.000 - LGA E 15 E 15 11.073 0 0.642 1.208 13.970 0.000 0.000 13.970 LGA T 16 T 16 10.309 0 0.615 0.559 11.471 0.000 0.000 8.260 LGA G 17 G 17 13.846 0 0.657 0.657 17.766 0.000 0.000 - LGA Q 18 Q 18 17.133 0 0.493 1.077 23.520 0.000 0.000 23.520 LGA N 19 N 19 18.788 0 0.653 1.211 19.679 0.000 0.000 17.653 LGA W 20 W 20 21.164 0 0.078 0.139 27.841 0.000 0.000 27.681 LGA A 21 A 21 18.636 0 0.660 0.609 19.485 0.000 0.000 - LGA S 22 S 22 21.727 0 0.021 0.046 23.930 0.000 0.000 23.728 LGA L 23 L 23 16.635 0 0.627 0.538 19.246 0.000 0.000 19.183 LGA A 24 A 24 13.156 0 0.635 0.606 14.831 0.000 0.000 - LGA A 25 A 25 11.319 0 0.394 0.383 13.323 0.000 0.000 - LGA N 26 N 26 7.749 0 0.642 0.814 12.667 0.000 0.000 10.038 LGA E 27 E 27 2.093 0 0.655 1.343 6.213 34.545 15.960 5.062 LGA L 28 L 28 1.245 0 0.275 1.190 3.387 58.182 52.273 1.915 LGA R 29 R 29 3.544 0 0.556 1.649 10.297 16.364 5.950 10.297 LGA V 30 V 30 2.708 0 0.266 1.041 7.323 49.091 28.312 6.431 LGA T 31 T 31 1.602 0 0.275 1.209 3.497 55.000 45.974 3.041 LGA E 32 E 32 0.503 0 0.323 0.849 3.243 74.091 53.737 2.969 LGA R 33 R 33 2.386 0 0.668 0.867 5.342 26.818 32.893 2.353 LGA P 34 P 34 0.696 0 0.654 0.741 3.272 56.364 44.156 3.272 LGA F 35 F 35 2.304 0 0.023 1.283 11.962 41.364 16.033 11.962 LGA W 36 W 36 0.528 0 0.040 0.898 3.305 65.909 52.727 1.301 LGA I 37 I 37 1.796 0 0.660 1.362 5.733 59.091 30.909 5.733 LGA S 38 S 38 2.907 0 0.652 0.845 5.657 20.455 16.667 5.657 LGA S 39 S 39 7.307 0 0.691 0.572 9.171 0.000 0.000 7.447 LGA F 40 F 40 7.810 0 0.657 1.475 11.113 0.000 0.000 11.113 LGA I 41 I 41 11.087 0 0.138 1.093 14.849 0.000 0.000 14.591 LGA G 42 G 42 15.820 0 0.668 0.668 16.629 0.000 0.000 - LGA R 43 R 43 17.797 0 0.234 1.152 20.569 0.000 0.000 17.947 LGA S 44 S 44 17.713 0 0.649 0.785 21.230 0.000 0.000 16.543 LGA K 45 K 45 18.110 0 0.594 0.763 20.756 0.000 0.000 11.151 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.327 11.206 12.053 12.665 8.991 6.234 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.08 25.568 23.978 0.550 LGA_LOCAL RMSD: 2.083 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.983 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.327 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.410848 * X + -0.788608 * Y + -0.457495 * Z + 90.914680 Y_new = -0.905223 * X + 0.293121 * Y + 0.307656 * Z + 47.567310 Z_new = -0.108519 * X + 0.540534 * Y + -0.834294 * Z + 32.554237 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.996859 0.108733 2.566699 [DEG: -114.4116 6.2299 147.0610 ] ZXZ: -2.162813 2.557647 -0.198128 [DEG: -123.9200 146.5424 -11.3519 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS281_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS281_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.08 23.978 11.33 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS281_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 10 N ALA 2 15.915 39.124 19.910 1.00 0.50 ATOM 11 CA ALA 2 15.263 38.671 21.115 1.00 0.60 ATOM 12 C ALA 2 14.102 39.578 21.405 1.00 0.50 ATOM 13 O ALA 2 14.240 40.805 21.393 1.00 0.40 ATOM 15 CB ALA 2 16.173 38.646 22.357 1.00 0.40 ATOM 16 N VAL 3 12.925 38.968 21.649 1.00 0.40 ATOM 17 CA VAL 3 11.711 39.684 21.927 1.00 0.40 ATOM 18 C VAL 3 11.441 39.524 23.398 1.00 0.40 ATOM 19 O VAL 3 11.262 38.405 23.894 1.00 0.50 ATOM 21 CB VAL 3 10.518 39.154 21.133 1.00 0.40 ATOM 22 CG1 VAL 3 9.208 39.856 21.541 1.00 0.60 ATOM 23 CG2 VAL 3 10.810 39.267 19.628 1.00 0.70 ATOM 24 N GLN 4 11.446 40.663 24.124 1.00 0.70 ATOM 25 CA GLN 4 11.157 40.692 25.531 1.00 0.60 ATOM 26 C GLN 4 10.022 41.660 25.572 1.00 0.50 ATOM 27 O GLN 4 10.182 42.847 25.278 1.00 0.40 ATOM 29 CB GLN 4 12.313 41.192 26.427 1.00 0.40 ATOM 30 CG GLN 4 13.549 40.312 26.504 1.00 0.50 ATOM 31 CD GLN 4 14.613 40.907 27.411 1.00 0.40 ATOM 32 OE1 GLN 4 14.663 42.120 27.620 1.00 0.70 ATOM 33 NE2 GLN 4 15.459 40.059 27.963 1.00 0.40 ATOM 34 N GLY 5 8.826 41.141 25.910 1.00 0.50 ATOM 35 CA GLY 5 7.620 41.915 25.940 1.00 0.70 ATOM 36 C GLY 5 7.033 41.562 24.599 1.00 0.40 ATOM 37 O GLY 5 7.605 41.974 23.586 1.00 0.50 ATOM 39 N PRO 6 5.899 40.876 24.540 1.00 0.50 ATOM 40 CA PRO 6 5.275 40.439 23.305 1.00 0.60 ATOM 41 C PRO 6 4.915 41.503 22.306 1.00 0.70 ATOM 42 O PRO 6 4.638 42.640 22.691 1.00 0.70 ATOM 43 CB PRO 6 4.056 39.620 23.721 1.00 0.70 ATOM 44 CG PRO 6 4.072 39.650 25.213 1.00 0.70 ATOM 45 CD PRO 6 4.741 40.963 25.613 1.00 0.60 ATOM 46 N TRP 7 4.935 41.105 21.013 1.00 0.50 ATOM 47 CA TRP 7 4.700 41.956 19.870 1.00 0.60 ATOM 48 C TRP 7 3.319 42.539 19.867 1.00 0.60 ATOM 49 O TRP 7 2.334 41.848 20.146 1.00 0.50 ATOM 51 CB TRP 7 4.782 41.198 18.526 1.00 0.60 ATOM 52 CG TRP 7 4.604 42.137 17.385 1.00 0.40 ATOM 53 CD1 TRP 7 3.461 42.249 16.613 1.00 0.50 ATOM 54 CD2 TRP 7 5.558 43.021 16.847 1.00 0.50 ATOM 55 NE1 TRP 7 3.666 43.183 15.614 1.00 0.60 ATOM 56 CE2 TRP 7 4.955 43.675 15.748 1.00 0.60 ATOM 57 CE3 TRP 7 6.878 43.378 17.177 1.00 0.70 ATOM 58 CZ2 TRP 7 5.651 44.621 14.973 1.00 0.60 ATOM 59 CZ3 TRP 7 7.551 44.314 16.405 1.00 0.60 ATOM 60 CH2 TRP 7 6.926 44.915 15.328 1.00 0.70 ATOM 61 N VAL 8 3.246 43.855 19.571 1.00 0.50 ATOM 62 CA VAL 8 2.009 44.585 19.488 1.00 0.40 ATOM 63 C VAL 8 2.203 45.724 18.510 1.00 0.40 ATOM 64 O VAL 8 3.326 46.208 18.327 1.00 0.40 ATOM 66 CB VAL 8 1.526 45.080 20.864 1.00 0.50 ATOM 67 CG1 VAL 8 2.518 46.081 21.498 1.00 0.40 ATOM 68 CG2 VAL 8 0.071 45.576 20.771 1.00 0.70 ATOM 69 N GLY 9 1.108 46.156 17.842 1.00 0.60 ATOM 70 CA GLY 9 1.181 47.258 16.924 1.00 0.70 ATOM 71 C GLY 9 0.576 47.015 15.587 1.00 0.40 ATOM 72 O GLY 9 0.652 45.922 15.019 1.00 0.40 ATOM 74 N SER 10 -0.047 48.097 15.067 1.00 0.70 ATOM 75 CA SER 10 -0.674 48.100 13.781 1.00 0.70 ATOM 76 C SER 10 0.374 48.630 12.846 1.00 0.50 ATOM 77 O SER 10 0.942 49.706 13.064 1.00 0.70 ATOM 79 CB SER 10 -1.946 48.973 13.719 1.00 0.60 ATOM 80 OG SER 10 -1.656 50.338 13.984 1.00 0.70 ATOM 81 N SER 11 0.650 47.851 11.792 1.00 0.60 ATOM 82 CA SER 11 1.625 48.171 10.789 1.00 0.60 ATOM 83 C SER 11 1.058 47.744 9.470 1.00 0.70 ATOM 84 O SER 11 0.201 46.863 9.436 1.00 0.40 ATOM 86 CB SER 11 2.964 47.437 11.016 1.00 0.50 ATOM 87 OG SER 11 3.941 47.819 10.051 1.00 0.60 ATOM 88 N TYR 12 1.525 48.356 8.356 1.00 0.70 ATOM 89 CA TYR 12 1.051 48.016 7.039 1.00 0.70 ATOM 90 C TYR 12 1.543 46.622 6.702 1.00 0.50 ATOM 91 O TYR 12 0.769 45.786 6.235 1.00 0.70 ATOM 93 CB TYR 12 1.521 49.067 5.997 1.00 0.40 ATOM 94 CG TYR 12 0.865 50.395 6.330 1.00 0.60 ATOM 95 CD1 TYR 12 -0.370 50.484 6.934 1.00 0.40 ATOM 96 CD2 TYR 12 1.495 51.593 5.996 1.00 0.40 ATOM 97 CE1 TYR 12 -0.987 51.699 7.204 1.00 0.60 ATOM 98 CE2 TYR 12 0.887 52.821 6.206 1.00 0.40 ATOM 99 CZ TYR 12 -0.355 52.862 6.801 1.00 0.40 ATOM 100 OH TYR 12 -1.010 54.058 6.967 1.00 0.60 ATOM 101 N VAL 13 2.847 46.369 6.971 1.00 0.60 ATOM 102 CA VAL 13 3.482 45.095 6.740 1.00 0.50 ATOM 103 C VAL 13 4.119 44.720 8.050 1.00 0.40 ATOM 104 O VAL 13 4.711 45.563 8.733 1.00 0.40 ATOM 106 CB VAL 13 4.591 45.115 5.685 1.00 0.50 ATOM 107 CG1 VAL 13 4.051 45.570 4.309 1.00 0.60 ATOM 108 CG2 VAL 13 5.746 46.019 6.149 1.00 0.70 ATOM 109 N ALA 14 3.971 43.435 8.437 1.00 0.60 ATOM 110 CA ALA 14 4.555 42.925 9.640 1.00 0.60 ATOM 111 C ALA 14 5.397 41.760 9.226 1.00 0.70 ATOM 112 O ALA 14 4.902 40.656 8.973 1.00 0.40 ATOM 114 CB ALA 14 3.551 42.442 10.694 1.00 0.40 ATOM 115 N GLU 15 6.710 42.031 9.074 1.00 0.70 ATOM 116 CA GLU 15 7.639 41.004 8.721 1.00 0.60 ATOM 117 C GLU 15 8.235 40.620 10.032 1.00 0.70 ATOM 118 O GLU 15 8.914 41.413 10.684 1.00 0.50 ATOM 120 CB GLU 15 8.719 41.447 7.718 1.00 0.50 ATOM 121 CG GLU 15 8.197 41.770 6.346 1.00 0.60 ATOM 122 CD GLU 15 9.232 42.208 5.340 1.00 0.50 ATOM 123 OE1 GLU 15 10.392 42.462 5.699 1.00 0.50 ATOM 124 OE2 GLU 15 8.860 42.338 4.142 1.00 0.70 ATOM 125 N THR 16 7.947 39.370 10.446 1.00 0.60 ATOM 126 CA THR 16 8.443 38.869 11.686 1.00 0.70 ATOM 127 C THR 16 9.300 37.707 11.261 1.00 0.40 ATOM 128 O THR 16 8.797 36.647 10.880 1.00 0.50 ATOM 130 CB THR 16 7.311 38.427 12.590 1.00 0.70 ATOM 131 OG1 THR 16 6.591 37.370 11.980 1.00 0.40 ATOM 132 CG2 THR 16 6.338 39.600 12.776 1.00 0.40 ATOM 133 N GLY 17 10.632 37.903 11.319 1.00 0.60 ATOM 134 CA GLY 17 11.554 36.869 10.933 1.00 0.60 ATOM 135 C GLY 17 12.797 36.980 11.745 1.00 0.60 ATOM 136 O GLY 17 13.219 38.083 12.116 1.00 0.50 ATOM 138 N GLN 18 13.416 35.801 12.006 1.00 0.50 ATOM 139 CA GLN 18 14.621 35.602 12.778 1.00 0.40 ATOM 140 C GLN 18 14.541 36.238 14.147 1.00 0.50 ATOM 141 O GLN 18 15.519 36.745 14.704 1.00 0.50 ATOM 143 CB GLN 18 15.907 35.979 12.006 1.00 0.50 ATOM 144 CG GLN 18 16.268 35.111 10.813 1.00 0.60 ATOM 145 CD GLN 18 17.545 35.577 10.137 1.00 0.60 ATOM 146 OE1 GLN 18 17.921 36.748 10.227 1.00 0.60 ATOM 147 NE2 GLN 18 18.226 34.666 9.469 1.00 0.50 ATOM 148 N ASN 19 13.313 36.218 14.704 1.00 0.50 ATOM 149 CA ASN 19 13.017 36.760 15.996 1.00 0.40 ATOM 150 C ASN 19 12.872 35.662 16.986 1.00 0.50 ATOM 151 O ASN 19 12.307 34.612 16.683 1.00 0.60 ATOM 153 CB ASN 19 11.791 37.693 16.027 1.00 0.40 ATOM 154 CG ASN 19 10.536 36.973 15.635 1.00 0.40 ATOM 155 OD1 ASN 19 10.551 35.833 15.160 1.00 0.50 ATOM 156 ND2 ASN 19 9.389 37.620 15.821 1.00 0.70 ATOM 157 N TRP 20 13.435 35.893 18.187 1.00 0.50 ATOM 158 CA TRP 20 13.387 34.924 19.236 1.00 0.60 ATOM 159 C TRP 20 12.561 35.470 20.345 1.00 0.60 ATOM 160 O TRP 20 12.955 36.404 21.041 1.00 0.70 ATOM 162 CB TRP 20 14.781 34.557 19.789 1.00 0.60 ATOM 163 CG TRP 20 15.595 33.879 18.741 1.00 0.60 ATOM 164 CD1 TRP 20 16.503 34.503 17.905 1.00 0.70 ATOM 165 CD2 TRP 20 15.550 32.522 18.369 1.00 0.50 ATOM 166 NE1 TRP 20 17.034 33.578 17.026 1.00 0.70 ATOM 167 CE2 TRP 20 16.462 32.345 17.304 1.00 0.40 ATOM 168 CE3 TRP 20 14.855 31.388 18.831 1.00 0.60 ATOM 169 CZ2 TRP 20 16.649 31.097 16.686 1.00 0.70 ATOM 170 CZ3 TRP 20 15.052 30.162 18.210 1.00 0.40 ATOM 171 CH2 TRP 20 15.942 30.042 17.159 1.00 0.50 ATOM 172 N ALA 21 11.341 34.909 20.475 1.00 0.40 ATOM 173 CA ALA 21 10.444 35.297 21.521 1.00 0.50 ATOM 174 C ALA 21 10.795 34.386 22.652 1.00 0.50 ATOM 175 O ALA 21 10.859 33.165 22.478 1.00 0.60 ATOM 177 CB ALA 21 8.961 35.100 21.162 1.00 0.60 ATOM 178 N SER 22 11.030 34.973 23.845 1.00 0.70 ATOM 179 CA SER 22 11.373 34.227 25.029 1.00 0.50 ATOM 180 C SER 22 10.221 33.338 25.420 1.00 0.50 ATOM 181 O SER 22 10.423 32.179 25.791 1.00 0.50 ATOM 183 CB SER 22 11.785 35.164 26.183 1.00 0.40 ATOM 184 OG SER 22 10.719 36.028 26.565 1.00 0.40 ATOM 185 N LEU 23 8.988 33.883 25.318 1.00 0.50 ATOM 186 CA LEU 23 7.784 33.176 25.622 1.00 0.40 ATOM 187 C LEU 23 7.388 32.342 24.429 1.00 0.70 ATOM 188 O LEU 23 7.262 32.838 23.305 1.00 0.70 ATOM 190 CB LEU 23 6.630 34.140 25.974 1.00 0.50 ATOM 191 CG LEU 23 6.837 34.936 27.225 1.00 0.60 ATOM 192 CD1 LEU 23 5.698 35.920 27.382 1.00 0.70 ATOM 193 CD2 LEU 23 7.001 34.057 28.459 1.00 0.70 ATOM 194 N ALA 24 7.217 31.030 24.678 1.00 0.50 ATOM 195 CA ALA 24 6.786 30.078 23.687 1.00 0.40 ATOM 196 C ALA 24 5.297 30.247 23.562 1.00 0.50 ATOM 197 O ALA 24 4.610 30.577 24.534 1.00 0.40 ATOM 199 CB ALA 24 7.089 28.614 24.050 1.00 0.70 ATOM 200 N ALA 25 4.772 29.999 22.345 1.00 0.40 ATOM 201 CA ALA 25 3.387 30.144 21.975 1.00 0.50 ATOM 202 C ALA 25 2.943 31.577 22.130 1.00 0.40 ATOM 203 O ALA 25 1.794 31.863 22.492 1.00 0.70 ATOM 205 CB ALA 25 2.432 29.142 22.673 1.00 0.50 ATOM 206 N ASN 26 3.889 32.510 21.864 1.00 0.40 ATOM 207 CA ASN 26 3.624 33.920 21.908 1.00 0.40 ATOM 208 C ASN 26 3.084 34.248 20.547 1.00 0.40 ATOM 209 O ASN 26 3.551 33.749 19.523 1.00 0.60 ATOM 211 CB ASN 26 4.851 34.802 22.241 1.00 0.50 ATOM 212 CG ASN 26 4.483 36.261 22.341 1.00 0.40 ATOM 213 OD1 ASN 26 3.346 36.568 22.716 1.00 0.50 ATOM 214 ND2 ASN 26 5.422 37.111 21.987 1.00 0.40 ATOM 215 N GLU 27 2.025 35.076 20.537 1.00 0.40 ATOM 216 CA GLU 27 1.339 35.509 19.352 1.00 0.70 ATOM 217 C GLU 27 2.193 36.434 18.533 1.00 0.70 ATOM 218 O GLU 27 2.856 37.312 19.085 1.00 0.50 ATOM 220 CB GLU 27 0.069 36.326 19.680 1.00 0.50 ATOM 221 CG GLU 27 -1.034 35.513 20.406 1.00 0.70 ATOM 222 CD GLU 27 -0.941 35.395 21.897 1.00 0.40 ATOM 223 OE1 GLU 27 -0.080 35.879 22.577 1.00 0.50 ATOM 224 OE2 GLU 27 -1.854 34.731 22.421 1.00 0.40 ATOM 225 N LEU 28 2.215 36.232 17.193 1.00 0.40 ATOM 226 CA LEU 28 2.945 37.089 16.292 1.00 0.60 ATOM 227 C LEU 28 2.218 38.407 16.285 1.00 0.60 ATOM 228 O LEU 28 2.845 39.461 16.395 1.00 0.70 ATOM 230 CB LEU 28 3.005 36.516 14.863 1.00 0.70 ATOM 231 CG LEU 28 3.906 37.262 13.923 1.00 0.70 ATOM 232 CD1 LEU 28 4.558 36.278 12.974 1.00 0.70 ATOM 233 CD2 LEU 28 3.182 38.377 13.179 1.00 0.60 ATOM 234 N ARG 29 0.867 38.343 16.179 1.00 0.70 ATOM 235 CA ARG 29 0.023 39.507 16.218 1.00 0.50 ATOM 236 C ARG 29 -1.366 39.013 16.522 1.00 0.70 ATOM 237 O ARG 29 -1.770 37.940 16.071 1.00 0.60 ATOM 239 CB ARG 29 -0.028 40.340 14.906 1.00 0.50 ATOM 240 CG ARG 29 -0.839 41.563 14.980 1.00 0.70 ATOM 241 CD ARG 29 -0.114 42.450 15.990 1.00 0.40 ATOM 242 NE ARG 29 -0.874 43.688 16.107 1.00 0.50 ATOM 243 CZ ARG 29 -1.920 43.833 16.921 1.00 0.70 ATOM 244 NH1 ARG 29 -2.362 42.782 17.614 1.00 0.50 ATOM 245 NH2 ARG 29 -2.524 45.014 16.968 1.00 0.40 ATOM 246 N VAL 30 -2.094 39.800 17.350 1.00 0.40 ATOM 247 CA VAL 30 -3.459 39.609 17.795 1.00 0.70 ATOM 248 C VAL 30 -4.089 40.968 18.042 1.00 0.50 ATOM 249 O VAL 30 -3.464 42.006 17.807 1.00 0.40 ATOM 251 CB VAL 30 -3.667 38.715 19.026 1.00 0.60 ATOM 252 CG1 VAL 30 -2.996 39.320 20.268 1.00 0.50 ATOM 253 CG2 VAL 30 -5.179 38.481 19.258 1.00 0.50 ATOM 254 N THR 31 -5.383 40.961 18.462 1.00 0.60 ATOM 255 CA THR 31 -6.232 42.081 18.803 1.00 0.50 ATOM 256 C THR 31 -6.674 42.919 17.647 1.00 0.60 ATOM 257 O THR 31 -7.862 42.919 17.323 1.00 0.40 ATOM 259 CB THR 31 -5.789 42.954 19.976 1.00 0.60 ATOM 260 OG1 THR 31 -5.796 42.254 21.214 1.00 0.70 ATOM 261 CG2 THR 31 -6.718 44.176 20.059 1.00 0.70 ATOM 262 N GLU 32 -5.712 43.608 16.987 1.00 0.70 ATOM 263 CA GLU 32 -6.013 44.458 15.865 1.00 0.60 ATOM 264 C GLU 32 -5.997 43.631 14.608 1.00 0.40 ATOM 265 O GLU 32 -5.120 43.742 13.746 1.00 0.50 ATOM 267 CB GLU 32 -5.065 45.670 15.768 1.00 0.40 ATOM 268 CG GLU 32 -5.222 46.690 16.929 1.00 0.50 ATOM 269 CD GLU 32 -4.338 47.900 16.915 1.00 0.40 ATOM 270 OE1 GLU 32 -3.404 48.067 16.179 1.00 0.50 ATOM 271 OE2 GLU 32 -4.637 48.770 17.752 1.00 0.50 ATOM 272 N ARG 33 -7.021 42.759 14.508 1.00 0.50 ATOM 273 CA ARG 33 -7.226 41.866 13.405 1.00 0.70 ATOM 274 C ARG 33 -7.560 42.518 12.086 1.00 0.70 ATOM 275 O ARG 33 -7.079 41.967 11.095 1.00 0.60 ATOM 277 CB ARG 33 -8.135 40.658 13.715 1.00 0.70 ATOM 278 CG ARG 33 -7.585 39.684 14.674 1.00 0.70 ATOM 279 CD ARG 33 -8.659 38.604 14.805 1.00 0.50 ATOM 280 NE ARG 33 -8.162 37.609 15.749 1.00 0.60 ATOM 281 CZ ARG 33 -8.294 37.720 17.069 1.00 0.60 ATOM 282 NH1 ARG 33 -8.828 38.826 17.586 1.00 0.40 ATOM 283 NH2 ARG 33 -7.825 36.741 17.834 1.00 0.40 ATOM 284 N PRO 34 -8.328 43.614 11.947 1.00 0.40 ATOM 285 CA PRO 34 -8.614 44.226 10.661 1.00 0.50 ATOM 286 C PRO 34 -7.418 44.787 9.940 1.00 0.50 ATOM 287 O PRO 34 -7.493 44.909 8.717 1.00 0.50 ATOM 288 CB PRO 34 -9.651 45.321 10.931 1.00 0.60 ATOM 289 CG PRO 34 -9.902 45.256 12.436 1.00 0.70 ATOM 290 CD PRO 34 -9.868 43.770 12.696 1.00 0.50 ATOM 291 N PHE 35 -6.329 45.157 10.662 1.00 0.60 ATOM 292 CA PHE 35 -5.145 45.697 10.037 1.00 0.40 ATOM 293 C PHE 35 -4.405 44.660 9.242 1.00 0.40 ATOM 294 O PHE 35 -4.447 43.470 9.566 1.00 0.60 ATOM 296 CB PHE 35 -4.171 46.386 11.012 1.00 0.40 ATOM 297 CG PHE 35 -4.653 47.629 11.707 1.00 0.50 ATOM 298 CD1 PHE 35 -4.533 48.875 11.061 1.00 0.70 ATOM 299 CD2 PHE 35 -5.233 47.606 12.957 1.00 0.50 ATOM 300 CE1 PHE 35 -4.893 50.028 11.730 1.00 0.50 ATOM 301 CE2 PHE 35 -5.621 48.729 13.637 1.00 0.60 ATOM 302 CZ PHE 35 -5.460 49.983 12.990 1.00 0.60 ATOM 303 N TRP 36 -3.723 45.119 8.165 1.00 0.50 ATOM 304 CA TRP 36 -2.979 44.259 7.271 1.00 0.70 ATOM 305 C TRP 36 -1.754 43.723 7.939 1.00 0.60 ATOM 306 O TRP 36 -0.920 44.471 8.443 1.00 0.70 ATOM 308 CB TRP 36 -2.645 44.929 5.922 1.00 0.70 ATOM 309 CG TRP 36 -3.889 45.214 5.157 1.00 0.70 ATOM 310 CD1 TRP 36 -5.166 44.837 5.535 1.00 0.60 ATOM 311 CD2 TRP 36 -3.996 45.847 3.903 1.00 0.60 ATOM 312 NE1 TRP 36 -6.070 45.221 4.562 1.00 0.60 ATOM 313 CE2 TRP 36 -5.366 45.854 3.549 1.00 0.40 ATOM 314 CE3 TRP 36 -3.087 46.454 3.016 1.00 0.40 ATOM 315 CZ2 TRP 36 -5.815 46.406 2.336 1.00 0.40 ATOM 316 CZ3 TRP 36 -3.548 46.994 1.824 1.00 0.60 ATOM 317 CH2 TRP 36 -4.894 46.961 1.512 1.00 0.70 ATOM 318 N ILE 37 -1.662 42.379 7.943 1.00 0.40 ATOM 319 CA ILE 37 -0.605 41.643 8.589 1.00 0.70 ATOM 320 C ILE 37 0.174 40.886 7.553 1.00 0.70 ATOM 321 O ILE 37 -0.376 40.439 6.549 1.00 0.50 ATOM 323 CB ILE 37 -1.176 40.616 9.583 1.00 0.60 ATOM 324 CG1 ILE 37 -1.910 41.241 10.761 1.00 0.70 ATOM 325 CG2 ILE 37 -0.024 39.688 9.980 1.00 0.40 ATOM 326 CD1 ILE 37 -2.671 40.232 11.602 1.00 0.50 ATOM 327 N SER 38 1.502 40.788 7.773 1.00 0.50 ATOM 328 CA SER 38 2.380 40.053 6.917 1.00 0.40 ATOM 329 C SER 38 3.096 39.112 7.851 1.00 0.50 ATOM 330 O SER 38 3.800 39.555 8.754 1.00 0.50 ATOM 332 CB SER 38 3.394 40.958 6.199 1.00 0.40 ATOM 333 OG SER 38 4.184 40.169 5.317 1.00 0.70 ATOM 334 N SER 39 2.865 37.784 7.682 1.00 0.40 ATOM 335 CA SER 39 3.456 36.749 8.484 1.00 0.50 ATOM 336 C SER 39 3.531 35.449 7.717 1.00 0.50 ATOM 337 O SER 39 2.715 35.197 6.831 1.00 0.70 ATOM 339 CB SER 39 2.705 36.543 9.815 1.00 0.60 ATOM 340 OG SER 39 1.362 36.131 9.601 1.00 0.70 ATOM 341 N PHE 40 4.547 34.607 8.042 1.00 0.60 ATOM 342 CA PHE 40 4.756 33.336 7.392 1.00 0.70 ATOM 343 C PHE 40 5.311 32.365 8.390 1.00 0.70 ATOM 344 O PHE 40 6.197 32.712 9.170 1.00 0.70 ATOM 346 CB PHE 40 5.736 33.454 6.192 1.00 0.50 ATOM 347 CG PHE 40 7.078 33.910 6.698 1.00 0.60 ATOM 348 CD1 PHE 40 8.022 32.971 7.089 1.00 0.70 ATOM 349 CD2 PHE 40 7.357 35.244 6.872 1.00 0.40 ATOM 350 CE1 PHE 40 9.236 33.374 7.658 1.00 0.60 ATOM 351 CE2 PHE 40 8.553 35.652 7.453 1.00 0.60 ATOM 352 CZ PHE 40 9.481 34.706 7.842 1.00 0.40 ATOM 353 N ILE 41 4.781 31.124 8.381 1.00 0.40 ATOM 354 CA ILE 41 5.253 30.075 9.246 1.00 0.50 ATOM 355 C ILE 41 5.027 28.787 8.504 1.00 0.70 ATOM 356 O ILE 41 4.113 28.680 7.682 1.00 0.50 ATOM 358 CB ILE 41 4.609 30.073 10.641 1.00 0.70 ATOM 359 CG1 ILE 41 5.164 29.006 11.576 1.00 0.60 ATOM 360 CG2 ILE 41 3.092 30.001 10.438 1.00 0.70 ATOM 361 CD1 ILE 41 4.801 29.232 13.033 1.00 0.50 ATOM 362 N GLY 42 5.870 27.772 8.764 1.00 0.40 ATOM 363 CA GLY 42 5.660 26.543 8.086 1.00 0.60 ATOM 364 C GLY 42 6.279 25.400 8.778 1.00 0.60 ATOM 365 O GLY 42 7.308 25.509 9.447 1.00 0.50 ATOM 367 N ARG 43 5.578 24.262 8.636 1.00 0.60 ATOM 368 CA ARG 43 6.024 23.040 9.175 1.00 0.40 ATOM 369 C ARG 43 6.559 22.341 7.988 1.00 0.70 ATOM 370 O ARG 43 5.860 21.674 7.221 1.00 0.70 ATOM 372 CB ARG 43 4.999 22.198 9.977 1.00 0.50 ATOM 373 CG ARG 43 4.468 22.847 11.187 1.00 0.70 ATOM 374 CD ARG 43 5.655 22.927 12.144 1.00 0.40 ATOM 375 NE ARG 43 5.185 23.564 13.369 1.00 0.70 ATOM 376 CZ ARG 43 5.965 23.793 14.421 1.00 0.40 ATOM 377 NH1 ARG 43 7.226 23.357 14.414 1.00 0.40 ATOM 378 NH2 ARG 43 5.439 24.405 15.477 1.00 0.50 ATOM 379 N SER 44 7.870 22.601 7.822 1.00 0.60 ATOM 380 CA SER 44 8.758 22.076 6.829 1.00 0.50 ATOM 381 C SER 44 9.120 20.693 7.292 1.00 0.50 ATOM 382 O SER 44 9.520 19.851 6.483 1.00 0.40 ATOM 384 CB SER 44 10.039 22.911 6.692 1.00 0.40 ATOM 385 OG SER 44 10.756 22.892 7.919 1.00 0.70 ATOM 386 N LYS 45 8.998 20.444 8.628 1.00 0.40 ATOM 387 CA LYS 45 9.220 19.174 9.279 1.00 0.50 ATOM 388 C LYS 45 8.203 18.254 8.655 1.00 0.60 ATOM 389 O LYS 45 8.527 17.105 8.347 1.00 0.40 ATOM 391 CB LYS 45 8.905 19.200 10.786 1.00 0.70 ATOM 392 CG LYS 45 9.839 20.062 11.589 1.00 0.40 ATOM 393 CD LYS 45 9.492 20.053 13.044 1.00 0.50 ATOM 394 CE LYS 45 10.308 20.850 13.989 1.00 0.50 ATOM 395 NZ LYS 45 9.831 20.736 15.417 1.00 0.50 TER END