####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS266_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS266_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 23 - 43 4.90 12.55 LONGEST_CONTINUOUS_SEGMENT: 21 24 - 44 4.86 12.70 LCS_AVERAGE: 39.67 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 28 - 35 1.92 14.27 LONGEST_CONTINUOUS_SEGMENT: 8 29 - 36 1.80 16.70 LCS_AVERAGE: 12.91 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 4 2 - 5 0.98 28.82 LONGEST_CONTINUOUS_SEGMENT: 4 4 - 7 0.90 17.82 LONGEST_CONTINUOUS_SEGMENT: 4 7 - 10 0.76 37.15 LONGEST_CONTINUOUS_SEGMENT: 4 14 - 17 0.74 26.70 LONGEST_CONTINUOUS_SEGMENT: 4 17 - 20 0.90 25.10 LONGEST_CONTINUOUS_SEGMENT: 4 25 - 28 0.97 23.45 LONGEST_CONTINUOUS_SEGMENT: 4 27 - 30 0.52 21.00 LONGEST_CONTINUOUS_SEGMENT: 4 34 - 37 0.35 23.60 LCS_AVERAGE: 8.16 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 4 13 3 3 4 4 4 6 7 7 8 10 11 12 13 14 15 17 19 20 21 23 LCS_GDT V 3 V 3 4 5 13 3 3 5 5 5 6 7 7 8 9 11 12 12 14 15 17 19 20 21 23 LCS_GDT Q 4 Q 4 4 5 13 3 3 5 5 5 6 7 7 8 10 11 12 13 14 15 17 19 20 21 23 LCS_GDT G 5 G 5 4 6 13 3 3 5 5 5 6 7 7 8 10 11 12 13 14 15 17 19 20 21 23 LCS_GDT P 6 P 6 4 6 13 3 3 5 5 5 6 7 7 8 10 11 12 13 14 15 17 19 20 22 24 LCS_GDT W 7 W 7 4 6 13 3 4 5 5 5 6 7 7 8 10 11 12 13 14 15 17 19 20 22 25 LCS_GDT V 8 V 8 4 6 13 3 4 4 5 5 5 6 7 8 10 11 12 13 14 15 16 16 17 20 21 LCS_GDT G 9 G 9 4 6 13 3 4 4 5 5 5 7 7 8 10 11 12 13 14 15 16 16 17 18 20 LCS_GDT S 10 S 10 4 6 13 3 4 4 5 5 5 6 7 8 10 11 12 13 14 15 17 19 20 21 23 LCS_GDT S 11 S 11 3 4 13 3 3 3 4 4 4 6 7 8 10 11 12 13 14 15 17 19 20 22 24 LCS_GDT Y 12 Y 12 3 3 13 3 3 3 3 3 4 5 7 8 10 11 12 12 14 15 16 18 20 21 23 LCS_GDT V 13 V 13 3 5 13 3 3 3 3 4 5 5 7 8 10 11 12 13 14 15 17 19 20 23 28 LCS_GDT A 14 A 14 4 5 13 3 4 4 5 6 6 6 8 9 10 11 12 13 14 18 22 24 27 28 29 LCS_GDT E 15 E 15 4 6 13 3 4 4 5 6 6 6 8 9 10 11 12 13 13 15 16 18 19 20 23 LCS_GDT T 16 T 16 4 6 14 3 4 4 5 6 6 6 8 9 9 11 12 13 14 16 17 19 20 25 29 LCS_GDT G 17 G 17 4 6 15 3 4 4 5 6 6 7 8 9 12 13 14 19 22 24 26 28 28 28 29 LCS_GDT Q 18 Q 18 4 6 15 3 3 4 5 6 7 8 10 11 13 15 19 21 23 24 26 28 28 28 29 LCS_GDT N 19 N 19 4 6 15 3 3 4 5 6 7 8 10 11 13 16 19 21 23 24 26 28 28 28 29 LCS_GDT W 20 W 20 4 6 15 3 3 4 5 6 7 8 10 11 13 16 19 21 23 24 26 28 28 28 29 LCS_GDT A 21 A 21 3 5 15 1 3 3 5 6 7 8 10 11 12 15 18 20 23 24 26 28 28 28 29 LCS_GDT S 22 S 22 3 5 15 3 3 4 5 6 7 8 10 11 12 15 18 20 23 24 25 28 28 28 29 LCS_GDT L 23 L 23 3 4 21 3 3 4 4 5 7 8 10 11 13 16 19 21 23 24 26 28 28 28 29 LCS_GDT A 24 A 24 3 4 21 3 3 4 4 5 5 6 10 11 13 16 19 21 23 24 26 28 28 28 29 LCS_GDT A 25 A 25 4 4 21 3 3 4 5 6 7 8 10 11 14 17 19 21 23 24 26 28 28 28 29 LCS_GDT N 26 N 26 4 4 21 3 3 4 5 5 6 8 10 11 13 16 19 21 23 24 26 28 28 28 29 LCS_GDT E 27 E 27 4 7 21 3 4 4 5 8 9 10 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT L 28 L 28 4 8 21 3 4 5 5 8 9 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT R 29 R 29 4 8 21 3 4 6 6 8 9 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT V 30 V 30 4 8 21 3 4 6 6 8 9 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT T 31 T 31 3 8 21 3 4 6 6 8 9 12 12 14 15 17 18 21 23 24 26 28 28 28 29 LCS_GDT E 32 E 32 3 8 21 3 4 4 5 8 9 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT R 33 R 33 3 8 21 3 3 6 6 8 9 12 12 14 15 17 17 21 22 24 26 28 28 28 29 LCS_GDT P 34 P 34 4 8 21 4 4 6 6 8 9 12 12 14 15 17 18 21 22 24 26 28 28 28 29 LCS_GDT F 35 F 35 4 8 21 4 4 6 6 7 9 12 12 14 15 17 18 21 22 24 26 28 28 28 29 LCS_GDT W 36 W 36 4 8 21 4 4 4 5 7 9 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT I 37 I 37 4 5 21 4 4 4 5 5 7 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT S 38 S 38 3 5 21 1 3 4 5 5 8 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT S 39 S 39 3 4 21 3 3 3 4 7 8 12 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT F 40 F 40 3 5 21 3 3 5 5 7 9 9 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT I 41 I 41 3 5 21 3 3 3 4 5 6 8 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT G 42 G 42 3 5 21 3 3 5 5 7 9 10 12 14 15 17 19 21 23 24 26 28 28 28 29 LCS_GDT R 43 R 43 3 5 21 3 3 3 3 5 5 7 8 8 8 9 17 21 23 24 26 28 28 28 29 LCS_GDT S 44 S 44 3 5 21 3 3 3 4 5 6 7 9 10 13 14 15 20 22 24 26 28 28 28 29 LCS_GDT K 45 K 45 3 3 20 3 3 3 3 3 3 4 4 4 11 12 12 13 14 18 20 24 25 27 29 LCS_AVERAGE LCS_A: 20.25 ( 8.16 12.91 39.67 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 4 6 6 8 9 12 12 14 15 17 19 21 23 24 26 28 28 28 29 GDT PERCENT_AT 9.09 9.09 13.64 13.64 18.18 20.45 27.27 27.27 31.82 34.09 38.64 43.18 47.73 52.27 54.55 59.09 63.64 63.64 63.64 65.91 GDT RMS_LOCAL 0.35 0.35 0.90 0.90 2.08 2.05 2.73 2.73 3.17 3.34 3.90 4.64 4.73 5.13 5.20 5.50 5.83 5.83 5.83 6.07 GDT RMS_ALL_AT 23.60 23.60 17.40 17.40 15.04 15.36 14.31 14.31 13.81 13.93 13.14 12.35 12.61 12.11 12.34 12.21 11.97 11.97 11.97 11.98 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.057 0 0.049 0.050 18.426 0.000 0.000 - LGA V 3 V 3 19.956 0 0.083 0.106 22.642 0.000 0.000 22.397 LGA Q 4 Q 4 18.561 0 0.031 0.730 22.114 0.000 0.000 22.114 LGA G 5 G 5 18.875 0 0.061 0.061 18.875 0.000 0.000 - LGA P 6 P 6 17.657 0 0.714 0.611 20.373 0.000 0.000 16.187 LGA W 7 W 7 19.009 0 0.402 1.313 21.591 0.000 0.000 20.519 LGA V 8 V 8 26.144 0 0.664 1.489 29.809 0.000 0.000 29.809 LGA G 9 G 9 28.374 0 0.501 0.501 28.374 0.000 0.000 - LGA S 10 S 10 23.313 0 0.682 0.709 25.071 0.000 0.000 21.611 LGA S 11 S 11 20.687 0 0.610 0.772 22.097 0.000 0.000 17.766 LGA Y 12 Y 12 24.395 0 0.639 1.260 31.426 0.000 0.000 31.426 LGA V 13 V 13 21.445 0 0.599 0.907 22.426 0.000 0.000 20.101 LGA A 14 A 14 17.187 0 0.620 0.603 18.326 0.000 0.000 - LGA E 15 E 15 18.748 0 0.050 1.566 22.866 0.000 0.000 22.286 LGA T 16 T 16 18.195 0 0.725 0.622 20.072 0.000 0.000 19.047 LGA G 17 G 17 15.677 0 0.723 0.723 15.677 0.000 0.000 - LGA Q 18 Q 18 15.061 0 0.049 1.077 16.949 0.000 0.000 15.268 LGA N 19 N 19 13.209 0 0.676 0.753 14.490 0.000 0.000 14.490 LGA W 20 W 20 14.392 0 0.577 1.226 16.601 0.000 0.000 15.648 LGA A 21 A 21 13.233 0 0.654 0.613 15.680 0.000 0.000 - LGA S 22 S 22 16.002 0 0.609 0.760 17.350 0.000 0.000 17.350 LGA L 23 L 23 13.419 0 0.079 1.029 16.331 0.000 0.000 16.331 LGA A 24 A 24 8.695 0 0.629 0.608 10.538 0.000 0.000 - LGA A 25 A 25 8.454 0 0.616 0.602 8.736 0.000 0.000 - LGA N 26 N 26 10.910 0 0.033 1.155 15.010 0.000 0.000 14.789 LGA E 27 E 27 6.834 0 0.658 1.325 13.163 5.909 2.626 12.539 LGA L 28 L 28 2.061 0 0.621 0.822 8.397 33.182 17.955 8.397 LGA R 29 R 29 3.530 0 0.552 1.137 9.238 31.818 11.570 9.238 LGA V 30 V 30 1.963 0 0.184 0.981 3.370 48.636 44.935 1.819 LGA T 31 T 31 2.049 0 0.701 1.404 5.638 40.000 34.805 1.292 LGA E 32 E 32 1.914 0 0.028 1.149 9.673 54.091 24.242 8.598 LGA R 33 R 33 1.985 0 0.129 1.167 13.852 54.091 19.835 13.852 LGA P 34 P 34 1.451 0 0.649 0.616 4.671 44.091 43.377 2.228 LGA F 35 F 35 3.080 0 0.048 1.323 11.331 39.545 14.380 11.331 LGA W 36 W 36 3.323 0 0.050 0.173 13.049 30.909 8.831 13.049 LGA I 37 I 37 3.347 0 0.677 1.415 9.928 18.636 9.318 9.928 LGA S 38 S 38 3.586 0 0.700 0.654 4.496 29.091 21.212 4.265 LGA S 39 S 39 3.256 0 0.699 0.849 3.993 14.545 13.333 3.757 LGA F 40 F 40 5.728 0 0.654 1.470 14.620 0.000 0.000 14.620 LGA I 41 I 41 7.838 0 0.063 0.122 12.799 0.000 0.000 12.799 LGA G 42 G 42 6.687 0 0.643 0.643 7.292 0.000 0.000 - LGA R 43 R 43 10.030 0 0.555 1.300 15.216 0.000 0.000 14.793 LGA S 44 S 44 11.791 0 0.045 0.654 12.999 0.000 0.000 12.999 LGA K 45 K 45 12.953 0 0.063 1.145 20.621 0.000 0.000 20.621 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.042 9.916 11.196 10.103 6.055 4.883 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.73 27.273 24.181 0.424 LGA_LOCAL RMSD: 2.734 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.306 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.042 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.222451 * X + 0.763185 * Y + 0.606683 * Z + 16.453646 Y_new = 0.900338 * X + 0.077930 * Y + -0.428157 * Z + 48.614784 Z_new = -0.374042 * X + 0.641464 * Y + -0.669789 * Z + -6.286104 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.328573 0.383363 2.377792 [DEG: 76.1216 21.9651 136.2375 ] ZXZ: 0.956233 2.304720 -0.527905 [DEG: 54.7881 132.0508 -30.2467 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS266_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS266_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.73 24.181 10.04 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS266_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 15.298 37.392 -3.336 1.00 0.00 ATOM 10 CA ALA 2 16.611 36.879 -3.585 1.00 0.00 ATOM 11 C ALA 2 17.037 37.438 -4.903 1.00 0.00 ATOM 12 O ALA 2 16.201 37.801 -5.728 1.00 0.00 ATOM 13 CB ALA 2 16.657 35.342 -3.670 1.00 0.00 ATOM 14 N VAL 3 18.361 37.554 -5.126 1.00 0.00 ATOM 15 CA VAL 3 18.818 38.073 -6.382 1.00 0.00 ATOM 16 C VAL 3 18.431 37.072 -7.414 1.00 0.00 ATOM 17 O VAL 3 18.481 35.868 -7.164 1.00 0.00 ATOM 18 CB VAL 3 20.303 38.282 -6.448 1.00 0.00 ATOM 19 CG1 VAL 3 20.688 38.615 -7.898 1.00 0.00 ATOM 20 CG2 VAL 3 20.683 39.388 -5.448 1.00 0.00 ATOM 21 N GLN 4 18.025 37.556 -8.607 1.00 0.00 ATOM 22 CA GLN 4 17.511 36.683 -9.623 1.00 0.00 ATOM 23 C GLN 4 18.617 35.870 -10.200 0.50 0.50 ATOM 24 O GLN 4 19.781 36.268 -10.195 1.00 0.00 ATOM 25 CB GLN 4 16.808 37.377 -10.808 1.00 0.00 ATOM 26 CG GLN 4 17.734 38.195 -11.712 1.00 0.00 ATOM 27 CD GLN 4 16.991 38.491 -13.011 1.00 0.00 ATOM 28 OE1 GLN 4 17.555 39.058 -13.944 1.00 0.00 ATOM 29 NE2 GLN 4 15.696 38.080 -13.083 1.00 0.00 ATOM 30 N GLY 5 18.252 34.674 -10.698 1.00 0.00 ATOM 31 CA GLY 5 19.197 33.784 -11.290 1.00 0.00 ATOM 32 C GLY 5 19.733 32.966 -10.175 1.00 0.00 ATOM 33 O GLY 5 19.751 33.391 -9.021 1.00 0.00 ATOM 34 N PRO 6 20.160 31.785 -10.497 1.00 0.00 ATOM 35 CA PRO 6 20.758 30.992 -9.473 1.00 0.00 ATOM 36 C PRO 6 22.067 31.635 -9.194 1.00 0.00 ATOM 37 O PRO 6 22.725 32.074 -10.136 1.00 0.00 ATOM 38 CB PRO 6 20.819 29.571 -10.027 1.00 0.00 ATOM 39 CG PRO 6 19.620 29.523 -10.995 1.00 0.00 ATOM 40 CD PRO 6 19.461 30.973 -11.480 1.00 0.00 ATOM 41 N TRP 7 22.469 31.720 -7.920 1.00 0.00 ATOM 42 CA TRP 7 23.714 32.363 -7.652 1.00 0.00 ATOM 43 C TRP 7 24.794 31.391 -7.976 1.00 0.00 ATOM 44 O TRP 7 24.656 30.189 -7.747 1.00 0.00 ATOM 45 CB TRP 7 23.862 32.801 -6.189 1.00 0.00 ATOM 46 CG TRP 7 25.202 33.398 -5.825 1.00 0.00 ATOM 47 CD1 TRP 7 26.176 33.947 -6.607 1.00 0.00 ATOM 48 CD2 TRP 7 25.693 33.433 -4.479 1.00 0.00 ATOM 49 NE1 TRP 7 27.251 34.313 -5.829 1.00 0.00 ATOM 50 CE2 TRP 7 26.964 34.006 -4.516 1.00 0.00 ATOM 51 CE3 TRP 7 25.133 33.017 -3.306 1.00 0.00 ATOM 52 CZ2 TRP 7 27.696 34.173 -3.375 1.00 0.00 ATOM 53 CZ3 TRP 7 25.873 33.191 -2.157 1.00 0.00 ATOM 54 CH2 TRP 7 27.129 33.758 -2.190 1.00 0.00 ATOM 55 N VAL 8 25.902 31.913 -8.534 1.00 0.00 ATOM 56 CA VAL 8 27.036 31.127 -8.909 1.00 0.00 ATOM 57 C VAL 8 27.633 30.574 -7.658 1.00 0.00 ATOM 58 O VAL 8 27.615 31.210 -6.605 1.00 0.00 ATOM 59 CB VAL 8 28.108 31.932 -9.578 1.00 0.00 ATOM 60 CG1 VAL 8 27.566 32.495 -10.903 1.00 0.00 ATOM 61 CG2 VAL 8 28.566 33.014 -8.586 1.00 0.00 ATOM 62 N GLY 9 28.161 29.342 -7.740 1.00 0.00 ATOM 63 CA GLY 9 28.732 28.759 -6.569 1.00 0.00 ATOM 64 C GLY 9 27.576 28.394 -5.704 1.00 0.00 ATOM 65 O GLY 9 26.426 28.512 -6.123 1.00 0.00 ATOM 66 N SER 10 27.859 27.948 -4.468 1.00 0.00 ATOM 67 CA SER 10 26.800 27.593 -3.572 1.00 0.00 ATOM 68 C SER 10 27.065 28.325 -2.301 1.00 0.00 ATOM 69 O SER 10 28.213 28.622 -1.978 1.00 0.00 ATOM 70 CB SER 10 26.782 26.102 -3.191 1.00 0.00 ATOM 71 OG SER 10 26.548 25.294 -4.335 1.00 0.00 ATOM 72 N SER 11 25.995 28.662 -1.558 1.00 0.00 ATOM 73 CA SER 11 26.205 29.299 -0.297 1.00 0.00 ATOM 74 C SER 11 26.415 28.202 0.686 1.00 0.00 ATOM 75 O SER 11 26.185 27.032 0.387 1.00 0.00 ATOM 76 CB SER 11 25.015 30.138 0.200 1.00 0.00 ATOM 77 OG SER 11 23.907 29.296 0.474 1.00 0.00 ATOM 78 N TYR 12 26.882 28.557 1.890 1.00 0.00 ATOM 79 CA TYR 12 27.095 27.555 2.882 1.00 0.00 ATOM 80 C TYR 12 26.089 27.782 3.959 1.00 0.00 ATOM 81 O TYR 12 26.051 28.844 4.580 1.00 0.00 ATOM 82 CB TYR 12 28.502 27.641 3.484 1.00 0.00 ATOM 83 CG TYR 12 28.526 26.832 4.728 1.00 0.00 ATOM 84 CD1 TYR 12 28.607 25.458 4.705 1.00 0.00 ATOM 85 CD2 TYR 12 28.473 27.486 5.935 1.00 0.00 ATOM 86 CE1 TYR 12 28.635 24.754 5.889 1.00 0.00 ATOM 87 CE2 TYR 12 28.501 26.791 7.118 1.00 0.00 ATOM 88 CZ TYR 12 28.578 25.421 7.093 1.00 0.00 ATOM 89 OH TYR 12 28.605 24.709 8.312 1.00 0.00 ATOM 90 N VAL 13 25.218 26.783 4.188 1.00 0.00 ATOM 91 CA VAL 13 24.232 26.919 5.215 1.00 0.00 ATOM 92 C VAL 13 24.086 25.577 5.845 1.00 0.00 ATOM 93 O VAL 13 24.482 24.563 5.270 1.00 0.00 ATOM 94 CB VAL 13 22.882 27.359 4.714 1.00 0.00 ATOM 95 CG1 VAL 13 22.321 26.278 3.775 1.00 0.00 ATOM 96 CG2 VAL 13 21.979 27.665 5.922 1.00 0.00 ATOM 97 N ALA 14 23.519 25.546 7.062 1.00 0.00 ATOM 98 CA ALA 14 23.362 24.310 7.764 1.00 0.00 ATOM 99 C ALA 14 22.352 23.497 7.028 1.00 0.00 ATOM 100 O ALA 14 21.522 24.031 6.292 1.00 0.00 ATOM 101 CB ALA 14 22.885 24.481 9.215 1.00 0.00 ATOM 102 N GLU 15 22.421 22.162 7.205 1.00 0.00 ATOM 103 CA GLU 15 21.541 21.261 6.524 1.00 0.00 ATOM 104 C GLU 15 20.131 21.551 6.930 1.00 0.00 ATOM 105 O GLU 15 19.227 21.524 6.096 1.00 0.00 ATOM 106 CB GLU 15 21.841 19.775 6.805 1.00 0.00 ATOM 107 CG GLU 15 23.027 19.212 6.007 1.00 0.00 ATOM 108 CD GLU 15 24.329 19.526 6.728 1.00 0.00 ATOM 109 OE1 GLU 15 24.270 20.122 7.835 1.00 0.00 ATOM 110 OE2 GLU 15 25.407 19.163 6.181 1.00 0.00 ATOM 111 N THR 16 19.893 21.848 8.222 1.00 0.00 ATOM 112 CA THR 16 18.544 22.149 8.603 1.00 0.00 ATOM 113 C THR 16 18.219 23.472 7.989 1.00 0.00 ATOM 114 O THR 16 19.116 24.229 7.625 1.00 0.00 ATOM 115 CB THR 16 18.332 22.236 10.089 1.00 0.00 ATOM 116 OG1 THR 16 19.124 23.274 10.649 1.00 0.00 ATOM 117 CG2 THR 16 18.706 20.881 10.715 1.00 0.00 ATOM 118 N GLY 17 16.917 23.775 7.832 1.00 0.00 ATOM 119 CA GLY 17 16.542 25.005 7.193 1.00 0.00 ATOM 120 C GLY 17 15.319 25.510 7.876 1.00 0.00 ATOM 121 O GLY 17 14.952 25.026 8.945 1.00 0.00 ATOM 122 N GLN 18 14.647 26.514 7.277 1.00 0.00 ATOM 123 CA GLN 18 13.472 27.004 7.925 1.00 0.00 ATOM 124 C GLN 18 12.508 25.874 7.987 1.00 0.00 ATOM 125 O GLN 18 12.394 25.076 7.056 1.00 0.00 ATOM 126 CB GLN 18 12.749 28.160 7.207 1.00 0.00 ATOM 127 CG GLN 18 11.453 28.573 7.919 1.00 0.00 ATOM 128 CD GLN 18 10.788 29.702 7.142 1.00 0.00 ATOM 129 OE1 GLN 18 9.620 29.612 6.768 1.00 0.00 ATOM 130 NE2 GLN 18 11.547 30.804 6.902 1.00 0.00 ATOM 131 N ASN 19 11.806 25.775 9.127 1.00 0.00 ATOM 132 CA ASN 19 10.834 24.742 9.281 1.00 0.00 ATOM 133 C ASN 19 9.713 25.112 8.382 1.00 0.00 ATOM 134 O ASN 19 9.414 26.292 8.201 1.00 0.00 ATOM 135 CB ASN 19 10.249 24.651 10.703 1.00 0.00 ATOM 136 CG ASN 19 11.369 24.240 11.645 1.00 0.00 ATOM 137 OD1 ASN 19 12.541 24.501 11.380 1.00 0.00 ATOM 138 ND2 ASN 19 11.006 23.576 12.776 1.00 0.00 ATOM 139 N TRP 20 9.081 24.103 7.760 1.00 0.00 ATOM 140 CA TRP 20 7.949 24.392 6.943 1.00 0.00 ATOM 141 C TRP 20 6.938 24.968 7.870 1.00 0.00 ATOM 142 O TRP 20 6.331 25.999 7.582 1.00 0.00 ATOM 143 CB TRP 20 7.374 23.134 6.265 1.00 0.00 ATOM 144 CG TRP 20 6.046 23.338 5.574 1.00 0.00 ATOM 145 CD1 TRP 20 4.805 22.971 6.004 1.00 0.00 ATOM 146 CD2 TRP 20 5.858 24.009 4.316 1.00 0.00 ATOM 147 NE1 TRP 20 3.856 23.356 5.088 1.00 0.00 ATOM 148 CE2 TRP 20 4.487 24.001 4.046 1.00 0.00 ATOM 149 CE3 TRP 20 6.749 24.585 3.455 1.00 0.00 ATOM 150 CZ2 TRP 20 3.987 24.569 2.911 1.00 0.00 ATOM 151 CZ3 TRP 20 6.238 25.160 2.310 1.00 0.00 ATOM 152 CH2 TRP 20 4.886 25.153 2.044 1.00 0.00 ATOM 153 N ALA 21 6.764 24.313 9.035 1.00 0.00 ATOM 154 CA ALA 21 5.866 24.805 10.034 1.00 0.00 ATOM 155 C ALA 21 6.633 24.860 11.316 1.00 0.00 ATOM 156 O ALA 21 7.533 24.054 11.554 1.00 0.00 ATOM 157 CB ALA 21 4.643 23.903 10.275 1.00 0.00 ATOM 158 N SER 22 6.309 25.849 12.169 1.00 0.00 ATOM 159 CA SER 22 6.987 25.958 13.424 1.00 0.00 ATOM 160 C SER 22 6.104 25.397 14.482 1.00 0.00 ATOM 161 O SER 22 4.908 25.195 14.280 1.00 0.00 ATOM 162 CB SER 22 7.333 27.399 13.836 1.00 0.00 ATOM 163 OG SER 22 8.397 27.890 13.036 1.00 0.00 ATOM 164 N LEU 23 6.714 25.108 15.645 1.00 0.00 ATOM 165 CA LEU 23 6.009 24.581 16.770 1.00 0.00 ATOM 166 C LEU 23 5.066 25.662 17.189 1.00 0.00 ATOM 167 O LEU 23 3.914 25.408 17.533 1.00 0.00 ATOM 168 CB LEU 23 6.982 24.243 17.924 1.00 0.00 ATOM 169 CG LEU 23 6.394 23.506 19.148 1.00 0.00 ATOM 170 CD1 LEU 23 7.485 23.246 20.198 1.00 0.00 ATOM 171 CD2 LEU 23 5.192 24.239 19.757 1.00 0.00 ATOM 172 N ALA 24 5.548 26.916 17.154 1.00 0.00 ATOM 173 CA ALA 24 4.724 28.019 17.531 1.00 0.00 ATOM 174 C ALA 24 5.020 29.121 16.573 1.00 0.00 ATOM 175 O ALA 24 6.060 29.122 15.917 1.00 0.00 ATOM 176 CB ALA 24 5.029 28.549 18.941 1.00 0.00 ATOM 177 N ALA 25 4.079 30.073 16.445 1.00 0.00 ATOM 178 CA ALA 25 4.302 31.176 15.561 1.00 0.00 ATOM 179 C ALA 25 5.386 31.995 16.173 1.00 0.00 ATOM 180 O ALA 25 5.337 32.327 17.355 1.00 0.00 ATOM 181 CB ALA 25 3.067 32.075 15.390 1.00 0.00 ATOM 182 N ASN 26 6.414 32.328 15.375 1.00 0.00 ATOM 183 CA ASN 26 7.515 33.086 15.888 1.00 0.00 ATOM 184 C ASN 26 7.095 34.497 16.166 1.00 0.00 ATOM 185 O ASN 26 7.438 35.064 17.202 1.00 0.00 ATOM 186 CB ASN 26 8.718 33.133 14.923 1.00 0.00 ATOM 187 CG ASN 26 8.310 33.889 13.665 1.00 0.00 ATOM 188 OD1 ASN 26 8.616 35.071 13.509 1.00 0.00 ATOM 189 ND2 ASN 26 7.589 33.197 12.744 1.00 0.00 ATOM 190 N GLU 27 6.316 35.094 15.247 1.00 0.00 ATOM 191 CA GLU 27 5.991 36.485 15.361 1.00 0.00 ATOM 192 C GLU 27 4.924 36.684 16.374 1.00 0.00 ATOM 193 O GLU 27 4.190 35.762 16.719 1.00 0.00 ATOM 194 CB GLU 27 5.485 37.130 14.060 1.00 0.00 ATOM 195 CG GLU 27 6.543 37.199 12.965 1.00 0.00 ATOM 196 CD GLU 27 6.055 38.166 11.898 1.00 0.00 ATOM 197 OE1 GLU 27 4.852 38.101 11.527 1.00 0.00 ATOM 198 OE2 GLU 27 6.889 38.994 11.443 1.00 0.00 ATOM 199 N LEU 28 4.852 37.918 16.910 1.00 0.00 ATOM 200 CA LEU 28 3.806 38.244 17.826 1.00 0.00 ATOM 201 C LEU 28 2.638 38.537 16.938 1.00 0.00 ATOM 202 O LEU 28 2.758 39.276 15.961 1.00 0.00 ATOM 203 CB LEU 28 4.162 39.469 18.698 1.00 0.00 ATOM 204 CG LEU 28 3.193 39.779 19.860 1.00 0.00 ATOM 205 CD1 LEU 28 3.657 41.009 20.655 1.00 0.00 ATOM 206 CD2 LEU 28 1.747 39.930 19.375 1.00 0.00 ATOM 207 N ARG 29 1.464 37.960 17.251 1.00 0.00 ATOM 208 CA ARG 29 0.346 38.088 16.366 1.00 0.00 ATOM 209 C ARG 29 -0.087 39.514 16.301 1.00 0.00 ATOM 210 O ARG 29 0.047 40.276 17.256 1.00 0.00 ATOM 211 CB ARG 29 -0.852 37.201 16.751 1.00 0.00 ATOM 212 CG ARG 29 -0.575 35.712 16.505 1.00 0.00 ATOM 213 CD ARG 29 -1.681 34.764 16.975 1.00 0.00 ATOM 214 NE ARG 29 -1.774 34.883 18.457 1.00 0.00 ATOM 215 CZ ARG 29 -2.845 35.512 19.017 1.00 0.00 ATOM 216 NH1 ARG 29 -3.855 35.972 18.222 1.00 0.00 ATOM 217 NH2 ARG 29 -2.916 35.667 20.373 1.00 0.00 ATOM 218 N VAL 30 -0.619 39.909 15.131 1.00 0.00 ATOM 219 CA VAL 30 -1.027 41.263 14.915 1.00 0.00 ATOM 220 C VAL 30 -2.178 41.563 15.816 1.00 0.00 ATOM 221 O VAL 30 -2.874 40.666 16.289 1.00 0.00 ATOM 222 CB VAL 30 -1.465 41.553 13.513 1.00 0.00 ATOM 223 CG1 VAL 30 -2.741 40.744 13.230 1.00 0.00 ATOM 224 CG2 VAL 30 -1.645 43.073 13.361 1.00 0.00 ATOM 225 N THR 31 -2.385 42.863 16.090 1.00 0.00 ATOM 226 CA THR 31 -3.429 43.278 16.978 1.00 0.00 ATOM 227 C THR 31 -4.726 43.189 16.250 1.00 0.00 ATOM 228 O THR 31 -4.778 42.788 15.089 1.00 0.00 ATOM 229 CB THR 31 -3.286 44.692 17.457 1.00 0.00 ATOM 230 OG1 THR 31 -4.202 44.950 18.511 1.00 0.00 ATOM 231 CG2 THR 31 -3.552 45.646 16.279 1.00 0.00 ATOM 232 N GLU 32 -5.827 43.551 16.936 1.00 0.00 ATOM 233 CA GLU 32 -7.115 43.458 16.323 1.00 0.00 ATOM 234 C GLU 32 -7.170 44.440 15.203 1.00 0.00 ATOM 235 O GLU 32 -6.761 45.592 15.342 1.00 0.00 ATOM 236 CB GLU 32 -8.267 43.763 17.293 1.00 0.00 ATOM 237 CG GLU 32 -9.657 43.537 16.700 1.00 0.00 ATOM 238 CD GLU 32 -10.613 43.427 17.879 1.00 0.00 ATOM 239 OE1 GLU 32 -10.108 43.253 19.022 1.00 0.00 ATOM 240 OE2 GLU 32 -11.848 43.504 17.659 1.00 0.00 ATOM 241 N ARG 33 -7.657 43.979 14.039 1.00 0.00 ATOM 242 CA ARG 33 -7.794 44.845 12.912 1.00 0.00 ATOM 243 C ARG 33 -8.703 44.140 11.964 1.00 0.00 ATOM 244 O ARG 33 -8.784 42.914 11.967 1.00 0.00 ATOM 245 CB ARG 33 -6.475 45.094 12.162 1.00 0.00 ATOM 246 CG ARG 33 -6.640 46.048 10.983 1.00 0.00 ATOM 247 CD ARG 33 -6.912 47.480 11.433 1.00 0.00 ATOM 248 NE ARG 33 -7.504 48.213 10.282 1.00 0.00 ATOM 249 CZ ARG 33 -8.273 49.310 10.536 1.00 0.00 ATOM 250 NH1 ARG 33 -8.431 49.739 11.822 1.00 0.00 ATOM 251 NH2 ARG 33 -8.894 49.965 9.512 1.00 0.00 ATOM 252 N PRO 34 -9.412 44.890 11.172 1.00 0.00 ATOM 253 CA PRO 34 -10.259 44.290 10.182 1.00 0.00 ATOM 254 C PRO 34 -9.436 43.693 9.088 1.00 0.00 ATOM 255 O PRO 34 -9.951 42.863 8.342 1.00 0.00 ATOM 256 CB PRO 34 -11.245 45.379 9.745 1.00 0.00 ATOM 257 CG PRO 34 -10.698 46.681 10.360 1.00 0.00 ATOM 258 CD PRO 34 -9.895 46.198 11.578 1.00 0.00 ATOM 259 N PHE 35 -8.159 44.104 8.964 1.00 0.00 ATOM 260 CA PHE 35 -7.336 43.568 7.922 1.00 0.00 ATOM 261 C PHE 35 -6.213 42.833 8.566 1.00 0.00 ATOM 262 O PHE 35 -5.873 43.073 9.725 1.00 0.00 ATOM 263 CB PHE 35 -6.670 44.630 7.038 1.00 0.00 ATOM 264 CG PHE 35 -7.756 45.419 6.403 1.00 0.00 ATOM 265 CD1 PHE 35 -8.263 46.528 7.036 1.00 0.00 ATOM 266 CD2 PHE 35 -8.274 45.048 5.185 1.00 0.00 ATOM 267 CE1 PHE 35 -9.267 47.269 6.462 1.00 0.00 ATOM 268 CE2 PHE 35 -9.280 45.786 4.607 1.00 0.00 ATOM 269 CZ PHE 35 -9.779 46.897 5.244 1.00 0.00 ATOM 270 N TRP 36 -5.620 41.886 7.814 1.00 0.00 ATOM 271 CA TRP 36 -4.514 41.137 8.322 1.00 0.00 ATOM 272 C TRP 36 -3.335 42.050 8.258 1.00 0.00 ATOM 273 O TRP 36 -3.107 42.703 7.241 1.00 0.00 ATOM 274 CB TRP 36 -4.184 39.904 7.463 1.00 0.00 ATOM 275 CG TRP 36 -5.306 38.896 7.433 1.00 0.00 ATOM 276 CD1 TRP 36 -6.411 38.876 6.636 1.00 0.00 ATOM 277 CD2 TRP 36 -5.397 37.748 8.289 1.00 0.00 ATOM 278 NE1 TRP 36 -7.196 37.792 6.950 1.00 0.00 ATOM 279 CE2 TRP 36 -6.582 37.088 7.965 1.00 0.00 ATOM 280 CE3 TRP 36 -4.568 37.283 9.267 1.00 0.00 ATOM 281 CZ2 TRP 36 -6.957 35.948 8.618 1.00 0.00 ATOM 282 CZ3 TRP 36 -4.945 36.132 9.921 1.00 0.00 ATOM 283 CH2 TRP 36 -6.118 35.477 9.604 1.00 0.00 ATOM 284 N ILE 37 -2.563 42.128 9.355 1.00 0.00 ATOM 285 CA ILE 37 -1.413 42.983 9.361 1.00 0.00 ATOM 286 C ILE 37 -0.275 42.154 9.858 1.00 0.00 ATOM 287 O ILE 37 -0.466 41.251 10.671 1.00 0.00 ATOM 288 CB ILE 37 -1.552 44.157 10.293 1.00 0.00 ATOM 289 CG1 ILE 37 -2.748 45.032 9.886 1.00 0.00 ATOM 290 CG2 ILE 37 -0.221 44.927 10.302 1.00 0.00 ATOM 291 CD1 ILE 37 -3.144 46.058 10.948 1.00 0.00 ATOM 292 N SER 38 0.948 42.412 9.360 1.00 0.00 ATOM 293 CA SER 38 2.064 41.646 9.832 1.00 0.00 ATOM 294 C SER 38 3.023 42.618 10.423 1.00 0.00 ATOM 295 O SER 38 3.102 43.763 9.980 1.00 0.00 ATOM 296 CB SER 38 2.833 40.921 8.717 1.00 0.00 ATOM 297 OG SER 38 3.549 41.864 7.934 1.00 0.00 ATOM 298 N SER 39 3.765 42.190 11.463 1.00 0.00 ATOM 299 CA SER 39 4.721 43.081 12.044 1.00 0.00 ATOM 300 C SER 39 5.814 42.268 12.658 1.00 0.00 ATOM 301 O SER 39 5.615 41.126 13.069 1.00 0.00 ATOM 302 CB SER 39 4.145 43.957 13.166 1.00 0.00 ATOM 303 OG SER 39 3.132 44.809 12.653 1.00 0.00 ATOM 304 N PHE 40 7.013 42.874 12.724 1.00 0.00 ATOM 305 CA PHE 40 8.160 42.266 13.321 1.00 0.00 ATOM 306 C PHE 40 8.305 42.928 14.648 1.00 0.00 ATOM 307 O PHE 40 8.433 44.149 14.728 1.00 0.00 ATOM 308 CB PHE 40 9.441 42.537 12.508 1.00 0.00 ATOM 309 CG PHE 40 10.632 41.927 13.167 1.00 0.00 ATOM 310 CD1 PHE 40 10.865 40.569 13.122 1.00 0.00 ATOM 311 CD2 PHE 40 11.541 42.734 13.805 1.00 0.00 ATOM 312 CE1 PHE 40 11.977 40.032 13.728 1.00 0.00 ATOM 313 CE2 PHE 40 12.654 42.205 14.411 1.00 0.00 ATOM 314 CZ PHE 40 12.874 40.850 14.376 1.00 0.00 ATOM 315 N ILE 41 8.246 42.132 15.732 1.00 0.00 ATOM 316 CA ILE 41 8.413 42.690 17.036 1.00 0.00 ATOM 317 C ILE 41 9.691 42.136 17.561 1.00 0.00 ATOM 318 O ILE 41 9.844 40.928 17.741 1.00 0.00 ATOM 319 CB ILE 41 7.306 42.348 17.999 1.00 0.00 ATOM 320 CG1 ILE 41 5.988 43.001 17.543 1.00 0.00 ATOM 321 CG2 ILE 41 7.732 42.774 19.411 1.00 0.00 ATOM 322 CD1 ILE 41 4.782 42.660 18.417 1.00 0.00 ATOM 323 N GLY 42 10.647 43.042 17.812 1.00 0.00 ATOM 324 CA GLY 42 11.951 42.701 18.282 1.00 0.00 ATOM 325 C GLY 42 12.262 43.751 19.276 1.00 0.00 ATOM 326 O GLY 42 11.436 44.062 20.133 1.00 0.00 ATOM 327 N ARG 43 13.478 44.324 19.205 1.00 0.00 ATOM 328 CA ARG 43 13.781 45.368 20.138 1.00 0.00 ATOM 329 C ARG 43 12.770 46.432 19.878 1.00 0.00 ATOM 330 O ARG 43 12.147 46.959 20.800 1.00 0.00 ATOM 331 CB ARG 43 15.155 45.992 19.941 1.00 0.00 ATOM 332 CG ARG 43 15.430 47.067 20.995 1.00 0.00 ATOM 333 CD ARG 43 16.562 48.028 20.643 1.00 0.00 ATOM 334 NE ARG 43 15.993 49.070 19.744 1.00 0.00 ATOM 335 CZ ARG 43 15.294 50.103 20.289 1.00 0.00 ATOM 336 NH1 ARG 43 15.015 50.100 21.626 1.00 0.00 ATOM 337 NH2 ARG 43 14.878 51.140 19.503 1.00 0.00 ATOM 338 N SER 44 12.583 46.765 18.587 1.00 0.00 ATOM 339 CA SER 44 11.623 47.753 18.198 1.00 0.00 ATOM 340 C SER 44 10.729 47.058 17.216 1.00 0.00 ATOM 341 O SER 44 11.207 46.343 16.333 1.00 0.00 ATOM 342 CB SER 44 12.257 48.953 17.491 1.00 0.00 ATOM 343 OG SER 44 11.276 49.905 17.116 1.00 0.00 ATOM 344 N LYS 45 9.400 47.240 17.335 1.00 0.00 ATOM 345 CA LYS 45 8.554 46.571 16.405 1.00 0.00 ATOM 346 C LYS 45 8.008 47.596 15.478 1.00 0.00 ATOM 347 O LYS 45 8.020 48.790 15.769 1.00 0.00 ATOM 348 CB LYS 45 7.357 45.820 17.022 1.00 0.00 ATOM 349 CG LYS 45 6.247 46.717 17.577 1.00 0.00 ATOM 350 CD LYS 45 6.656 47.579 18.773 1.00 0.00 ATOM 351 CE LYS 45 5.517 48.451 19.311 1.00 0.00 ATOM 352 NZ LYS 45 5.932 49.108 20.571 1.00 0.00 TER END