####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS261_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS261_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.85 4.85 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 9 - 33 1.93 6.71 LCS_AVERAGE: 42.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.88 6.82 LCS_AVERAGE: 17.56 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 7 44 0 3 4 9 11 14 18 20 30 33 37 40 41 42 42 42 42 43 43 44 LCS_GDT V 3 V 3 3 8 44 1 3 5 6 9 14 18 19 22 32 37 40 41 42 42 42 42 43 43 44 LCS_GDT Q 4 Q 4 3 8 44 1 3 4 6 10 14 18 26 30 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT G 5 G 5 3 8 44 1 3 5 7 13 23 25 30 31 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT P 6 P 6 3 8 44 3 3 5 8 11 13 19 24 30 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT W 7 W 7 3 8 44 3 3 5 8 11 14 19 26 31 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT V 8 V 8 3 24 44 3 3 6 11 19 25 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT G 9 G 9 9 25 44 9 12 17 22 24 25 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT S 10 S 10 9 25 44 7 10 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT S 11 S 11 9 25 44 7 9 15 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT Y 12 Y 12 9 25 44 7 9 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT V 13 V 13 9 25 44 7 9 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT A 14 A 14 9 25 44 7 9 15 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT E 15 E 15 9 25 44 7 9 15 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT T 16 T 16 9 25 44 7 10 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT G 17 G 17 9 25 44 5 10 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT Q 18 Q 18 5 25 44 3 4 15 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT N 19 N 19 4 25 44 3 4 6 12 19 25 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT W 20 W 20 13 25 44 9 12 16 20 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT A 21 A 21 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT S 22 S 22 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT L 23 L 23 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT A 24 A 24 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT A 25 A 25 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT N 26 N 26 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT E 27 E 27 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT L 28 L 28 13 25 44 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT R 29 R 29 13 25 44 7 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 42 43 44 LCS_GDT V 30 V 30 13 25 44 3 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT T 31 T 31 13 25 44 3 12 16 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT E 32 E 32 13 25 44 3 4 6 14 16 19 26 30 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT R 33 R 33 3 25 44 3 3 3 5 19 25 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT P 34 P 34 3 16 44 1 3 3 5 9 16 21 26 30 34 34 39 41 42 42 42 42 43 43 44 LCS_GDT F 35 F 35 3 16 44 4 10 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT W 36 W 36 6 10 44 4 4 6 9 19 24 27 31 32 34 36 38 40 42 42 42 42 43 43 44 LCS_GDT I 37 I 37 6 10 44 4 5 6 17 24 25 30 31 32 34 36 40 41 42 42 42 42 43 43 44 LCS_GDT S 38 S 38 6 10 44 4 5 6 16 23 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT S 39 S 39 6 10 44 4 5 6 15 23 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT F 40 F 40 6 10 44 4 5 6 9 16 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT I 41 I 41 6 10 44 4 5 6 11 20 26 29 31 32 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT G 42 G 42 5 10 44 4 5 5 8 10 14 18 20 30 34 37 40 41 42 42 42 42 43 43 44 LCS_GDT R 43 R 43 5 10 44 4 5 6 9 10 14 18 19 19 26 35 40 41 42 42 42 42 43 43 44 LCS_GDT S 44 S 44 5 10 44 4 5 5 8 9 13 18 19 19 21 22 23 27 29 32 35 38 43 43 44 LCS_GDT K 45 K 45 0 10 44 0 0 3 5 5 13 18 19 19 21 22 23 27 29 31 35 36 43 43 44 LCS_AVERAGE LCS_A: 53.44 ( 17.56 42.77 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 12 17 22 24 26 30 31 32 34 37 40 41 42 42 42 42 43 43 44 GDT PERCENT_AT 20.45 27.27 38.64 50.00 54.55 59.09 68.18 70.45 72.73 77.27 84.09 90.91 93.18 95.45 95.45 95.45 95.45 97.73 97.73 100.00 GDT RMS_LOCAL 0.29 0.51 1.04 1.35 1.51 1.94 2.17 2.28 2.41 2.65 3.49 3.85 3.94 4.04 4.04 4.04 4.04 4.84 4.47 4.85 GDT RMS_ALL_AT 6.71 6.86 6.89 6.89 7.02 5.99 6.27 6.07 6.05 6.21 5.06 4.95 4.94 4.96 4.96 4.96 4.96 4.85 4.87 4.85 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.806 0 0.043 0.045 11.589 0.000 0.000 - LGA V 3 V 3 9.695 0 0.632 0.677 11.354 0.000 0.000 9.116 LGA Q 4 Q 4 9.452 0 0.571 0.921 14.231 0.000 0.000 14.231 LGA G 5 G 5 7.780 0 0.036 0.036 9.159 0.000 0.000 - LGA P 6 P 6 9.076 0 0.050 0.087 11.933 0.000 0.000 11.933 LGA W 7 W 7 7.709 0 0.274 1.139 8.641 0.000 0.000 7.354 LGA V 8 V 8 3.966 0 0.647 0.645 6.587 25.000 17.143 3.343 LGA G 9 G 9 2.975 0 0.540 0.540 2.975 35.455 35.455 - LGA S 10 S 10 0.968 0 0.067 0.062 1.582 83.182 80.000 0.654 LGA S 11 S 11 1.557 0 0.166 0.210 2.954 54.545 47.273 2.954 LGA Y 12 Y 12 2.263 0 0.062 0.803 11.848 44.545 17.121 11.848 LGA V 13 V 13 1.856 0 0.038 1.208 5.754 58.182 44.416 5.754 LGA A 14 A 14 1.740 0 0.040 0.041 2.296 55.455 52.000 - LGA E 15 E 15 1.857 0 0.096 1.215 4.173 61.818 36.768 3.995 LGA T 16 T 16 0.574 0 0.045 0.148 1.936 81.818 75.065 1.498 LGA G 17 G 17 1.382 0 0.662 0.662 3.324 54.091 54.091 - LGA Q 18 Q 18 1.818 0 0.172 1.055 2.848 38.636 43.030 2.248 LGA N 19 N 19 3.246 0 0.462 1.055 8.255 31.364 15.682 5.807 LGA W 20 W 20 3.014 0 0.554 1.210 10.409 40.000 11.429 10.409 LGA A 21 A 21 1.298 0 0.057 0.063 1.844 65.909 69.091 - LGA S 22 S 22 1.200 0 0.039 0.072 1.619 69.545 65.758 1.619 LGA L 23 L 23 1.343 0 0.039 0.937 4.367 65.455 49.545 4.367 LGA A 24 A 24 1.346 0 0.022 0.035 1.495 65.455 65.455 - LGA A 25 A 25 0.566 0 0.044 0.042 0.991 81.818 85.455 - LGA N 26 N 26 0.581 0 0.059 0.507 2.229 86.364 78.636 0.909 LGA E 27 E 27 0.677 0 0.102 0.580 2.217 77.727 63.434 1.581 LGA L 28 L 28 1.236 0 0.042 0.788 5.317 65.909 42.045 3.628 LGA R 29 R 29 1.564 0 0.099 1.618 8.790 48.636 24.628 8.790 LGA V 30 V 30 1.814 0 0.196 0.157 3.459 61.818 45.974 3.004 LGA T 31 T 31 2.376 0 0.673 0.583 3.538 46.364 35.844 3.538 LGA E 32 E 32 5.143 0 0.713 1.099 8.359 9.545 4.242 7.731 LGA R 33 R 33 3.176 0 0.276 1.040 7.644 9.091 4.793 7.423 LGA P 34 P 34 5.301 0 0.633 0.647 6.652 1.364 0.779 6.652 LGA F 35 F 35 1.840 0 0.616 1.374 8.158 27.273 12.893 8.158 LGA W 36 W 36 5.346 0 0.567 1.163 13.251 8.636 2.468 13.235 LGA I 37 I 37 3.844 0 0.089 1.814 7.580 33.182 18.636 3.519 LGA S 38 S 38 3.093 0 0.191 0.212 4.821 25.455 17.576 4.544 LGA S 39 S 39 2.629 0 0.074 0.078 4.932 28.182 27.879 2.900 LGA F 40 F 40 3.221 0 0.057 0.382 9.501 20.000 8.926 9.501 LGA I 41 I 41 4.204 0 0.643 1.612 8.011 8.182 5.682 4.234 LGA G 42 G 42 10.372 0 0.033 0.033 13.312 0.000 0.000 - LGA R 43 R 43 11.494 0 0.071 1.348 13.225 0.000 0.000 10.128 LGA S 44 S 44 17.424 0 0.500 0.449 19.362 0.000 0.000 19.099 LGA K 45 K 45 18.149 0 0.411 1.007 19.187 0.000 0.000 17.581 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.845 4.844 6.072 35.682 28.618 14.753 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 31 2.28 60.795 59.137 1.300 LGA_LOCAL RMSD: 2.284 Number of atoms: 31 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.068 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.845 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.061624 * X + -0.521462 * Y + 0.851046 * Z + -7.382619 Y_new = 0.176231 * X + 0.844955 * Y + 0.504969 * Z + -52.793991 Z_new = -0.982418 * X + 0.118863 * Y + 0.143967 * Z + 59.737667 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.234409 1.383000 0.690169 [DEG: 70.7264 79.2400 39.5438 ] ZXZ: 2.106313 1.426327 -1.450392 [DEG: 120.6828 81.7225 -83.1013 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS261_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS261_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 31 2.28 59.137 4.85 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS261_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 17 N ALA 2 10.381 40.102 4.509 1.00 3.56 ATOM 19 CA ALA 2 9.404 40.369 3.479 1.00 3.56 ATOM 21 CB ALA 2 9.809 41.546 2.607 1.00 3.56 ATOM 25 C ALA 2 9.160 39.089 2.668 1.00 3.56 ATOM 26 O ALA 2 10.056 38.284 2.417 1.00 3.56 ATOM 27 N VAL 3 7.914 38.924 2.237 1.00 2.94 ATOM 29 CA VAL 3 7.607 38.300 0.939 1.00 2.94 ATOM 31 CB VAL 3 6.744 37.029 1.127 1.00 2.94 ATOM 33 CG1 VAL 3 6.014 36.498 -0.114 1.00 2.94 ATOM 37 CG2 VAL 3 7.630 35.883 1.637 1.00 2.94 ATOM 41 C VAL 3 6.993 39.365 0.018 1.00 2.94 ATOM 42 O VAL 3 6.858 39.139 -1.178 1.00 2.94 ATOM 43 N GLN 4 6.631 40.539 0.571 1.00 3.47 ATOM 45 CA GLN 4 5.841 41.594 -0.078 1.00 3.47 ATOM 47 CB GLN 4 6.721 42.569 -0.892 1.00 3.47 ATOM 50 CG GLN 4 7.832 43.185 -0.022 1.00 3.47 ATOM 53 CD GLN 4 8.418 44.480 -0.572 1.00 3.47 ATOM 54 OE1 GLN 4 7.894 45.573 -0.378 1.00 3.47 ATOM 55 NE2 GLN 4 9.568 44.418 -1.204 1.00 3.47 ATOM 58 C GLN 4 4.596 41.060 -0.816 1.00 3.47 ATOM 59 O GLN 4 4.123 41.645 -1.787 1.00 3.47 ATOM 60 N GLY 5 4.025 39.967 -0.291 1.00 3.39 ATOM 62 CA GLY 5 2.732 39.390 -0.658 1.00 3.39 ATOM 65 C GLY 5 1.857 39.190 0.596 1.00 3.39 ATOM 66 O GLY 5 2.391 39.166 1.705 1.00 3.39 ATOM 67 N PRO 6 0.518 39.086 0.457 1.00 3.30 ATOM 68 CD PRO 6 -0.203 39.125 -0.807 1.00 3.30 ATOM 71 CG PRO 6 -1.684 39.010 -0.447 1.00 3.30 ATOM 74 CB PRO 6 -1.736 39.661 0.936 1.00 3.30 ATOM 77 CA PRO 6 -0.419 39.216 1.584 1.00 3.30 ATOM 79 C PRO 6 -0.645 37.949 2.427 1.00 3.30 ATOM 80 O PRO 6 -1.095 38.030 3.571 1.00 3.30 ATOM 81 N TRP 7 -0.351 36.774 1.872 1.00 3.35 ATOM 83 CA TRP 7 -0.225 35.502 2.590 1.00 3.35 ATOM 85 CB TRP 7 0.101 34.406 1.551 1.00 3.35 ATOM 88 CG TRP 7 0.972 34.834 0.396 1.00 3.35 ATOM 89 CD1 TRP 7 2.320 34.936 0.417 1.00 3.35 ATOM 91 NE1 TRP 7 2.775 35.449 -0.781 1.00 3.35 ATOM 93 CE2 TRP 7 1.736 35.715 -1.644 1.00 3.35 ATOM 94 CZ2 TRP 7 1.684 36.260 -2.933 1.00 3.35 ATOM 96 CH2 TRP 7 0.436 36.411 -3.559 1.00 3.35 ATOM 98 CZ3 TRP 7 -0.737 36.025 -2.885 1.00 3.35 ATOM 100 CE3 TRP 7 -0.671 35.488 -1.583 1.00 3.35 ATOM 102 CD2 TRP 7 0.568 35.315 -0.926 1.00 3.35 ATOM 103 C TRP 7 0.874 35.652 3.648 1.00 3.35 ATOM 104 O TRP 7 2.043 35.834 3.305 1.00 3.35 ATOM 105 N VAL 8 0.505 35.621 4.936 1.00 1.99 ATOM 107 CA VAL 8 1.469 35.754 6.041 1.00 1.99 ATOM 109 CB VAL 8 0.835 35.563 7.422 1.00 1.99 ATOM 111 CG1 VAL 8 1.876 35.760 8.537 1.00 1.99 ATOM 115 CG2 VAL 8 -0.273 36.595 7.633 1.00 1.99 ATOM 119 C VAL 8 2.608 34.759 5.852 1.00 1.99 ATOM 120 O VAL 8 2.378 33.578 5.593 1.00 1.99 ATOM 121 N GLY 9 3.829 35.287 5.927 1.00 2.65 ATOM 123 CA GLY 9 5.024 34.621 5.432 1.00 2.65 ATOM 126 C GLY 9 5.149 33.178 5.884 1.00 2.65 ATOM 127 O GLY 9 5.048 32.900 7.077 1.00 2.65 ATOM 128 N SER 10 5.422 32.286 4.931 1.00 2.28 ATOM 130 CA SER 10 5.501 30.839 5.148 1.00 2.28 ATOM 132 CB SER 10 5.968 30.143 3.863 1.00 2.28 ATOM 135 OG SER 10 7.100 30.809 3.327 1.00 2.28 ATOM 137 C SER 10 6.414 30.442 6.313 1.00 2.28 ATOM 138 O SER 10 6.085 29.509 7.039 1.00 2.28 ATOM 139 N SER 11 7.499 31.197 6.530 1.00 1.91 ATOM 141 CA SER 11 8.318 31.144 7.745 1.00 1.91 ATOM 143 CB SER 11 9.502 32.109 7.608 1.00 1.91 ATOM 146 OG SER 11 10.490 31.851 8.574 1.00 1.91 ATOM 148 C SER 11 7.503 31.402 9.008 1.00 1.91 ATOM 149 O SER 11 7.200 30.458 9.714 1.00 1.91 ATOM 150 N TYR 12 7.063 32.642 9.247 1.00 1.62 ATOM 152 CA TYR 12 6.337 33.090 10.454 1.00 1.62 ATOM 154 CB TYR 12 5.828 34.508 10.110 1.00 1.62 ATOM 157 CG TYR 12 5.544 35.503 11.220 1.00 1.62 ATOM 158 CD1 TYR 12 5.439 35.135 12.580 1.00 1.62 ATOM 160 CE1 TYR 12 5.316 36.135 13.562 1.00 1.62 ATOM 162 CZ TYR 12 5.262 37.495 13.191 1.00 1.62 ATOM 163 OH TYR 12 5.190 38.467 14.131 1.00 1.62 ATOM 165 CE2 TYR 12 5.295 37.853 11.831 1.00 1.62 ATOM 167 CD2 TYR 12 5.443 36.859 10.852 1.00 1.62 ATOM 169 C TYR 12 5.160 32.178 10.816 1.00 1.62 ATOM 170 O TYR 12 4.951 31.827 11.983 1.00 1.62 ATOM 171 N VAL 13 4.393 31.768 9.799 1.00 1.60 ATOM 173 CA VAL 13 3.270 30.854 10.014 1.00 1.60 ATOM 175 CB VAL 13 2.234 30.873 8.884 1.00 1.60 ATOM 177 CG1 VAL 13 1.825 32.320 8.596 1.00 1.60 ATOM 181 CG2 VAL 13 2.702 30.218 7.586 1.00 1.60 ATOM 185 C VAL 13 3.768 29.452 10.364 1.00 1.60 ATOM 186 O VAL 13 3.298 28.918 11.354 1.00 1.60 ATOM 187 N ALA 14 4.771 28.867 9.693 1.00 1.92 ATOM 189 CA ALA 14 5.359 27.602 10.154 1.00 1.92 ATOM 191 CB ALA 14 6.429 27.143 9.156 1.00 1.92 ATOM 195 C ALA 14 5.920 27.676 11.596 1.00 1.92 ATOM 196 O ALA 14 5.809 26.715 12.351 1.00 1.92 ATOM 197 N GLU 15 6.469 28.823 11.997 1.00 2.07 ATOM 199 CA GLU 15 7.038 29.105 13.322 1.00 2.07 ATOM 201 CB GLU 15 7.900 30.396 13.227 1.00 2.07 ATOM 204 CG GLU 15 9.138 30.322 12.306 1.00 2.07 ATOM 207 CD GLU 15 9.750 31.713 12.022 1.00 2.07 ATOM 208 OE1 GLU 15 9.558 32.267 10.913 1.00 2.07 ATOM 209 OE2 GLU 15 10.434 32.272 12.908 1.00 2.07 ATOM 210 C GLU 15 5.961 29.301 14.411 1.00 2.07 ATOM 211 O GLU 15 6.280 29.172 15.592 1.00 2.07 ATOM 212 N THR 16 4.699 29.586 14.032 1.00 1.91 ATOM 214 CA THR 16 3.582 29.800 14.992 1.00 1.91 ATOM 216 CB THR 16 3.121 31.270 15.008 1.00 1.91 ATOM 218 CG2 THR 16 4.188 32.209 15.561 1.00 1.91 ATOM 222 OG1 THR 16 2.806 31.735 13.718 1.00 1.91 ATOM 224 C THR 16 2.397 28.845 14.780 1.00 1.91 ATOM 225 O THR 16 1.481 28.763 15.605 1.00 1.91 ATOM 226 N GLY 17 2.472 28.053 13.712 1.00 2.78 ATOM 228 CA GLY 17 1.567 27.020 13.236 1.00 2.78 ATOM 231 C GLY 17 0.294 27.515 12.541 1.00 2.78 ATOM 232 O GLY 17 0.184 28.647 12.090 1.00 2.78 ATOM 233 N GLN 18 -0.683 26.603 12.498 1.00 2.40 ATOM 235 CA GLN 18 -2.127 26.854 12.648 1.00 2.40 ATOM 237 CB GLN 18 -2.482 26.887 14.164 1.00 2.40 ATOM 240 CG GLN 18 -1.408 27.540 15.064 1.00 2.40 ATOM 243 CD GLN 18 -1.777 27.769 16.520 1.00 2.40 ATOM 244 OE1 GLN 18 -2.825 27.378 17.007 1.00 2.40 ATOM 245 NE2 GLN 18 -0.905 28.427 17.250 1.00 2.40 ATOM 248 C GLN 18 -2.818 28.005 11.894 1.00 2.40 ATOM 249 O GLN 18 -2.536 29.172 12.121 1.00 2.40 ATOM 250 N ASN 19 -3.864 27.653 11.118 1.00 2.44 ATOM 252 CA ASN 19 -4.874 28.569 10.539 1.00 2.44 ATOM 254 CB ASN 19 -5.997 28.795 11.573 1.00 2.44 ATOM 257 CG ASN 19 -6.525 27.502 12.165 1.00 2.44 ATOM 258 OD1 ASN 19 -6.987 26.620 11.465 1.00 2.44 ATOM 259 ND2 ASN 19 -6.427 27.322 13.463 1.00 2.44 ATOM 262 C ASN 19 -4.228 29.878 10.038 1.00 2.44 ATOM 263 O ASN 19 -4.517 30.977 10.519 1.00 2.44 ATOM 264 N TRP 20 -3.238 29.691 9.159 1.00 1.25 ATOM 266 CA TRP 20 -1.973 30.432 9.171 1.00 1.25 ATOM 268 CB TRP 20 -1.258 30.163 7.838 1.00 1.25 ATOM 271 CG TRP 20 -0.636 28.802 7.676 1.00 1.25 ATOM 272 CD1 TRP 20 -0.031 28.086 8.653 1.00 1.25 ATOM 274 NE1 TRP 20 0.482 26.916 8.132 1.00 1.25 ATOM 276 CE2 TRP 20 0.244 26.818 6.781 1.00 1.25 ATOM 277 CZ2 TRP 20 0.571 25.848 5.823 1.00 1.25 ATOM 279 CH2 TRP 20 0.205 26.060 4.482 1.00 1.25 ATOM 281 CZ3 TRP 20 -0.479 27.235 4.123 1.00 1.25 ATOM 283 CE3 TRP 20 -0.809 28.198 5.097 1.00 1.25 ATOM 285 CD2 TRP 20 -0.463 28.015 6.454 1.00 1.25 ATOM 286 C TRP 20 -2.047 31.919 9.531 1.00 1.25 ATOM 287 O TRP 20 -1.514 32.323 10.561 1.00 1.25 ATOM 288 N ALA 21 -2.720 32.746 8.729 1.00 1.15 ATOM 290 CA ALA 21 -2.748 34.182 9.001 1.00 1.15 ATOM 292 CB ALA 21 -3.405 34.886 7.807 1.00 1.15 ATOM 296 C ALA 21 -3.455 34.536 10.326 1.00 1.15 ATOM 297 O ALA 21 -2.962 35.367 11.101 1.00 1.15 ATOM 298 N SER 22 -4.608 33.916 10.603 1.00 1.18 ATOM 300 CA SER 22 -5.381 34.265 11.793 1.00 1.18 ATOM 302 CB SER 22 -6.836 33.780 11.723 1.00 1.18 ATOM 305 OG SER 22 -6.948 32.376 11.629 1.00 1.18 ATOM 307 C SER 22 -4.687 33.818 13.077 1.00 1.18 ATOM 308 O SER 22 -4.559 34.621 14.019 1.00 1.18 ATOM 309 N LEU 23 -4.177 32.580 13.121 1.00 1.29 ATOM 311 CA LEU 23 -3.496 32.159 14.345 1.00 1.29 ATOM 313 CB LEU 23 -3.547 30.644 14.570 1.00 1.29 ATOM 316 CG LEU 23 -4.316 30.213 15.835 1.00 1.29 ATOM 318 CD1 LEU 23 -3.716 30.764 17.131 1.00 1.29 ATOM 322 CD2 LEU 23 -5.799 30.601 15.773 1.00 1.29 ATOM 326 C LEU 23 -2.125 32.808 14.532 1.00 1.29 ATOM 327 O LEU 23 -1.816 33.164 15.661 1.00 1.29 ATOM 328 N ALA 24 -1.387 33.139 13.467 1.00 0.82 ATOM 330 CA ALA 24 -0.187 33.978 13.588 1.00 0.82 ATOM 332 CB ALA 24 0.544 34.020 12.241 1.00 0.82 ATOM 336 C ALA 24 -0.497 35.392 14.144 1.00 0.82 ATOM 337 O ALA 24 0.270 35.917 14.951 1.00 0.82 ATOM 338 N ALA 25 -1.642 36.007 13.795 1.00 0.88 ATOM 340 CA ALA 25 -2.061 37.274 14.428 1.00 0.88 ATOM 342 CB ALA 25 -3.322 37.808 13.725 1.00 0.88 ATOM 346 C ALA 25 -2.335 37.144 15.931 1.00 0.88 ATOM 347 O ALA 25 -1.956 38.026 16.718 1.00 0.88 ATOM 348 N ASN 26 -3.005 36.055 16.326 1.00 1.23 ATOM 350 CA ASN 26 -3.326 35.843 17.739 1.00 1.23 ATOM 352 CB ASN 26 -4.592 34.990 17.872 1.00 1.23 ATOM 355 CG ASN 26 -5.796 35.766 17.358 1.00 1.23 ATOM 356 OD1 ASN 26 -6.333 36.662 17.994 1.00 1.23 ATOM 357 ND2 ASN 26 -6.210 35.511 16.144 1.00 1.23 ATOM 360 C ASN 26 -2.118 35.380 18.579 1.00 1.23 ATOM 361 O ASN 26 -2.062 35.682 19.769 1.00 1.23 ATOM 362 N GLU 27 -1.098 34.774 17.972 1.00 1.27 ATOM 364 CA GLU 27 0.180 34.422 18.607 1.00 1.27 ATOM 366 CB GLU 27 0.810 33.224 17.870 1.00 1.27 ATOM 369 CG GLU 27 1.689 32.355 18.784 1.00 1.27 ATOM 372 CD GLU 27 0.950 31.858 20.041 1.00 1.27 ATOM 373 OE1 GLU 27 -0.303 31.768 20.052 1.00 1.27 ATOM 374 OE2 GLU 27 1.602 31.691 21.091 1.00 1.27 ATOM 375 C GLU 27 1.123 35.621 18.725 1.00 1.27 ATOM 376 O GLU 27 1.703 35.824 19.782 1.00 1.27 ATOM 377 N LEU 28 1.131 36.551 17.764 1.00 1.22 ATOM 379 CA LEU 28 1.656 37.917 17.968 1.00 1.22 ATOM 381 CB LEU 28 1.646 38.613 16.579 1.00 1.22 ATOM 384 CG LEU 28 2.758 39.627 16.231 1.00 1.22 ATOM 386 CD1 LEU 28 2.534 40.146 14.811 1.00 1.22 ATOM 390 CD2 LEU 28 2.942 40.827 17.146 1.00 1.22 ATOM 394 C LEU 28 0.794 38.719 18.996 1.00 1.22 ATOM 395 O LEU 28 1.074 39.882 19.273 1.00 1.22 ATOM 396 N ARG 29 -0.282 38.140 19.561 1.00 1.55 ATOM 398 CA ARG 29 -1.260 38.774 20.475 1.00 1.55 ATOM 400 CB ARG 29 -0.696 38.876 21.921 1.00 1.55 ATOM 403 CG ARG 29 -0.857 37.602 22.778 1.00 1.55 ATOM 406 CD ARG 29 0.028 36.463 22.274 1.00 1.55 ATOM 409 NE ARG 29 0.044 35.264 23.133 1.00 1.55 ATOM 411 CZ ARG 29 -0.181 34.042 22.675 1.00 1.55 ATOM 412 NH1 ARG 29 0.513 33.039 23.122 1.00 1.55 ATOM 415 NH2 ARG 29 -1.047 33.790 21.738 1.00 1.55 ATOM 418 C ARG 29 -1.921 40.071 19.966 1.00 1.55 ATOM 419 O ARG 29 -2.532 40.782 20.762 1.00 1.55 ATOM 420 N VAL 30 -1.893 40.370 18.662 1.00 1.62 ATOM 422 CA VAL 30 -2.593 41.559 18.134 1.00 1.62 ATOM 424 CB VAL 30 -1.797 42.374 17.109 1.00 1.62 ATOM 426 CG1 VAL 30 -2.547 43.665 16.742 1.00 1.62 ATOM 430 CG2 VAL 30 -0.497 42.843 17.770 1.00 1.62 ATOM 434 C VAL 30 -4.033 41.187 17.766 1.00 1.62 ATOM 435 O VAL 30 -4.393 40.943 16.607 1.00 1.62 ATOM 436 N THR 31 -4.818 41.083 18.844 1.00 2.38 ATOM 438 CA THR 31 -6.198 40.589 18.904 1.00 2.38 ATOM 440 CB THR 31 -6.854 40.885 20.262 1.00 2.38 ATOM 442 CG2 THR 31 -6.082 40.285 21.438 1.00 2.38 ATOM 446 OG1 THR 31 -6.964 42.270 20.490 1.00 2.38 ATOM 448 C THR 31 -7.073 41.100 17.762 1.00 2.38 ATOM 449 O THR 31 -6.917 42.221 17.303 1.00 2.38 ATOM 450 N GLU 32 -7.967 40.249 17.265 1.00 3.59 ATOM 452 CA GLU 32 -8.775 40.423 16.042 1.00 3.59 ATOM 454 CB GLU 32 -9.917 41.461 16.196 1.00 3.59 ATOM 457 CG GLU 32 -10.518 41.725 17.585 1.00 3.59 ATOM 460 CD GLU 32 -9.807 42.871 18.319 1.00 3.59 ATOM 461 OE1 GLU 32 -9.268 42.640 19.425 1.00 3.59 ATOM 462 OE2 GLU 32 -9.745 44.012 17.796 1.00 3.59 ATOM 463 C GLU 32 -8.051 40.691 14.697 1.00 3.59 ATOM 464 O GLU 32 -8.731 40.603 13.679 1.00 3.59 ATOM 465 N ARG 33 -6.745 41.023 14.611 1.00 3.34 ATOM 467 CA ARG 33 -6.249 41.892 13.507 1.00 3.34 ATOM 469 CB ARG 33 -5.768 43.215 14.136 1.00 3.34 ATOM 472 CG ARG 33 -6.921 44.058 14.741 1.00 3.34 ATOM 475 CD ARG 33 -6.448 45.125 15.749 1.00 3.34 ATOM 478 NE ARG 33 -7.230 45.104 17.011 1.00 3.34 ATOM 480 CZ ARG 33 -6.776 45.003 18.249 1.00 3.34 ATOM 481 NH1 ARG 33 -7.598 44.910 19.246 1.00 3.34 ATOM 484 NH2 ARG 33 -5.504 44.967 18.536 1.00 3.34 ATOM 487 C ARG 33 -5.203 41.219 12.554 1.00 3.34 ATOM 488 O ARG 33 -3.973 41.413 12.666 1.00 3.34 ATOM 489 N PRO 34 -5.705 40.549 11.482 1.00 2.88 ATOM 490 CD PRO 34 -7.063 40.031 11.344 1.00 2.88 ATOM 493 CG PRO 34 -7.108 39.226 10.048 1.00 2.88 ATOM 496 CB PRO 34 -6.042 39.900 9.196 1.00 2.88 ATOM 499 CA PRO 34 -4.980 40.253 10.238 1.00 2.88 ATOM 501 C PRO 34 -4.046 41.369 9.735 1.00 2.88 ATOM 502 O PRO 34 -3.028 41.112 9.084 1.00 2.88 ATOM 503 N PHE 35 -4.357 42.618 10.076 1.00 2.40 ATOM 505 CA PHE 35 -3.498 43.769 9.847 1.00 2.40 ATOM 507 CB PHE 35 -4.194 45.028 10.391 1.00 2.40 ATOM 510 CG PHE 35 -5.633 45.203 9.925 1.00 2.40 ATOM 511 CD1 PHE 35 -6.677 45.320 10.864 1.00 2.40 ATOM 513 CE1 PHE 35 -8.010 45.447 10.432 1.00 2.40 ATOM 515 CZ PHE 35 -8.306 45.463 9.059 1.00 2.40 ATOM 517 CE2 PHE 35 -7.267 45.357 8.117 1.00 2.40 ATOM 519 CD2 PHE 35 -5.935 45.228 8.548 1.00 2.40 ATOM 521 C PHE 35 -2.068 43.648 10.393 1.00 2.40 ATOM 522 O PHE 35 -1.126 44.036 9.701 1.00 2.40 ATOM 523 N TRP 36 -1.862 43.093 11.594 1.00 2.00 ATOM 525 CA TRP 36 -0.510 43.042 12.160 1.00 2.00 ATOM 527 CB TRP 36 -0.514 42.878 13.679 1.00 2.00 ATOM 530 CG TRP 36 0.342 43.919 14.337 1.00 2.00 ATOM 531 CD1 TRP 36 1.510 43.709 14.986 1.00 2.00 ATOM 533 NE1 TRP 36 2.002 44.909 15.461 1.00 2.00 ATOM 535 CE2 TRP 36 1.218 45.970 15.066 1.00 2.00 ATOM 536 CZ2 TRP 36 1.322 47.356 15.239 1.00 2.00 ATOM 538 CH2 TRP 36 0.332 48.190 14.692 1.00 2.00 ATOM 540 CZ3 TRP 36 -0.747 47.629 13.986 1.00 2.00 ATOM 542 CE3 TRP 36 -0.842 46.233 13.818 1.00 2.00 ATOM 544 CD2 TRP 36 0.138 45.367 14.352 1.00 2.00 ATOM 545 C TRP 36 0.371 42.051 11.427 1.00 2.00 ATOM 546 O TRP 36 1.394 42.475 10.885 1.00 2.00 ATOM 547 N ILE 37 -0.031 40.779 11.287 1.00 1.61 ATOM 549 CA ILE 37 0.866 39.859 10.532 1.00 1.61 ATOM 551 CB ILE 37 0.623 38.357 10.779 1.00 1.61 ATOM 553 CG2 ILE 37 1.517 37.857 11.920 1.00 1.61 ATOM 557 CG1 ILE 37 -0.802 37.898 11.101 1.00 1.61 ATOM 560 CD1 ILE 37 -1.899 38.430 10.187 1.00 1.61 ATOM 564 C ILE 37 0.981 40.186 9.028 1.00 1.61 ATOM 565 O ILE 37 2.091 40.114 8.479 1.00 1.61 ATOM 566 N SER 38 -0.106 40.625 8.369 1.00 1.56 ATOM 568 CA SER 38 -0.002 41.070 6.969 1.00 1.56 ATOM 570 CB SER 38 -1.351 41.422 6.332 1.00 1.56 ATOM 573 OG SER 38 -2.009 42.445 7.044 1.00 1.56 ATOM 575 C SER 38 1.007 42.219 6.828 1.00 1.56 ATOM 576 O SER 38 1.968 42.104 6.066 1.00 1.56 ATOM 577 N SER 39 0.921 43.258 7.665 1.00 1.56 ATOM 579 CA SER 39 1.898 44.350 7.653 1.00 1.56 ATOM 581 CB SER 39 1.415 45.527 8.507 1.00 1.56 ATOM 584 OG SER 39 1.612 45.292 9.890 1.00 1.56 ATOM 586 C SER 39 3.329 43.921 8.021 1.00 1.56 ATOM 587 O SER 39 4.287 44.575 7.611 1.00 1.56 ATOM 588 N PHE 40 3.532 42.831 8.765 1.00 1.87 ATOM 590 CA PHE 40 4.871 42.282 9.032 1.00 1.87 ATOM 592 CB PHE 40 4.832 41.400 10.291 1.00 1.87 ATOM 595 CG PHE 40 5.134 42.104 11.603 1.00 1.87 ATOM 596 CD1 PHE 40 4.386 43.227 12.010 1.00 1.87 ATOM 598 CE1 PHE 40 4.661 43.853 13.237 1.00 1.87 ATOM 600 CZ PHE 40 5.672 43.350 14.073 1.00 1.87 ATOM 602 CE2 PHE 40 6.415 42.225 13.676 1.00 1.87 ATOM 604 CD2 PHE 40 6.156 41.612 12.439 1.00 1.87 ATOM 606 C PHE 40 5.460 41.463 7.877 1.00 1.87 ATOM 607 O PHE 40 6.686 41.350 7.864 1.00 1.87 ATOM 608 N ILE 41 4.651 40.933 6.939 1.00 1.83 ATOM 610 CA ILE 41 5.204 40.255 5.737 1.00 1.83 ATOM 612 CB ILE 41 4.459 38.923 5.484 1.00 1.83 ATOM 614 CG2 ILE 41 3.015 39.143 5.004 1.00 1.83 ATOM 618 CG1 ILE 41 5.205 38.025 4.479 1.00 1.83 ATOM 621 CD1 ILE 41 6.604 37.619 4.969 1.00 1.83 ATOM 625 C ILE 41 5.250 41.138 4.469 1.00 1.83 ATOM 626 O ILE 41 6.001 40.865 3.523 1.00 1.83 ATOM 627 N GLY 42 4.462 42.213 4.472 1.00 2.13 ATOM 629 CA GLY 42 4.347 43.199 3.400 1.00 2.13 ATOM 632 C GLY 42 4.951 44.554 3.748 1.00 2.13 ATOM 633 O GLY 42 4.890 45.473 2.939 1.00 2.13 ATOM 634 N ARG 43 5.605 44.686 4.913 1.00 3.65 ATOM 636 CA ARG 43 6.747 45.603 5.012 1.00 3.65 ATOM 638 CB ARG 43 7.325 45.645 6.430 1.00 3.65 ATOM 641 CG ARG 43 6.629 46.740 7.264 1.00 3.65 ATOM 644 CD ARG 43 6.968 46.625 8.758 1.00 3.65 ATOM 647 NE ARG 43 6.199 47.577 9.595 1.00 3.65 ATOM 649 CZ ARG 43 4.974 47.391 10.070 1.00 3.65 ATOM 650 NH1 ARG 43 4.428 48.228 10.906 1.00 3.65 ATOM 653 NH2 ARG 43 4.260 46.371 9.713 1.00 3.65 ATOM 656 C ARG 43 7.726 45.260 3.905 1.00 3.65 ATOM 657 O ARG 43 8.016 44.085 3.684 1.00 3.65 ATOM 658 N SER 44 8.272 46.306 3.293 1.00 5.69 ATOM 660 CA SER 44 9.478 46.307 2.460 1.00 5.69 ATOM 662 CB SER 44 9.530 47.590 1.626 1.00 5.69 ATOM 665 OG SER 44 8.243 47.911 1.131 1.00 5.69 ATOM 667 C SER 44 10.752 46.037 3.308 1.00 5.69 ATOM 668 O SER 44 11.797 46.650 3.141 1.00 5.69 ATOM 669 N LYS 45 10.614 45.140 4.295 1.00 5.26 ATOM 671 CA LYS 45 11.606 44.502 5.156 1.00 5.26 ATOM 673 CB LYS 45 10.886 43.844 6.368 1.00 5.26 ATOM 676 CG LYS 45 10.736 44.720 7.620 1.00 5.26 ATOM 679 CD LYS 45 9.785 44.118 8.684 1.00 5.26 ATOM 682 CE LYS 45 10.253 42.823 9.377 1.00 5.26 ATOM 685 NZ LYS 45 9.468 41.621 8.982 1.00 5.26 ATOM 689 C LYS 45 12.412 43.461 4.337 1.00 5.26 ATOM 690 O LYS 45 12.404 42.275 4.649 1.00 5.26 TER END