####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS261_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS261_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 40 2 - 41 4.94 6.50 LONGEST_CONTINUOUS_SEGMENT: 40 3 - 42 4.82 6.50 LCS_AVERAGE: 90.03 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.91 6.91 LCS_AVERAGE: 30.01 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.74 6.69 LCS_AVERAGE: 19.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 40 3 3 6 8 9 10 11 13 18 19 23 26 30 31 33 34 36 38 40 41 LCS_GDT V 3 V 3 4 8 40 3 3 6 14 14 18 18 22 25 28 31 32 34 34 37 39 39 40 40 41 LCS_GDT Q 4 Q 4 4 8 40 3 3 7 12 14 17 20 23 25 29 31 32 35 36 38 39 39 40 40 41 LCS_GDT G 5 G 5 4 14 40 2 3 7 9 12 15 19 22 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT P 6 P 6 4 14 40 3 3 4 9 13 15 19 22 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT W 7 W 7 11 14 40 3 4 6 12 14 14 15 22 24 27 30 32 34 36 38 39 39 40 40 41 LCS_GDT V 8 V 8 11 14 40 4 7 11 13 14 15 19 22 25 29 31 32 35 36 38 39 39 40 40 41 LCS_GDT G 9 G 9 11 14 40 5 9 11 13 14 18 20 23 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT S 10 S 10 11 14 40 7 9 11 14 15 18 21 24 26 28 31 33 35 36 38 39 39 40 40 41 LCS_GDT S 11 S 11 11 14 40 7 9 11 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT Y 12 Y 12 11 14 40 7 9 11 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT V 13 V 13 11 14 40 7 9 11 13 14 18 21 24 26 28 31 33 35 36 38 39 39 40 40 41 LCS_GDT A 14 A 14 11 14 40 7 9 11 13 14 15 21 23 26 27 31 33 35 36 38 39 39 40 40 41 LCS_GDT E 15 E 15 11 14 40 7 9 11 13 14 15 16 18 26 27 31 33 35 36 38 39 39 40 40 41 LCS_GDT T 16 T 16 11 14 40 7 9 11 13 14 15 16 18 20 27 31 33 35 36 38 39 39 40 40 41 LCS_GDT G 17 G 17 11 14 40 3 9 11 13 14 15 16 18 20 23 29 32 34 36 38 39 39 40 40 41 LCS_GDT Q 18 Q 18 11 14 40 3 5 11 13 14 15 16 18 24 27 31 33 35 36 38 39 39 40 40 41 LCS_GDT N 19 N 19 4 15 40 3 4 4 4 5 15 21 24 26 28 31 33 35 36 38 39 39 40 40 41 LCS_GDT W 20 W 20 13 16 40 5 11 13 14 15 18 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT A 21 A 21 13 16 40 6 12 13 17 18 18 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT S 22 S 22 13 16 40 5 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT L 23 L 23 13 16 40 5 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT A 24 A 24 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT A 25 A 25 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT N 26 N 26 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT E 27 E 27 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT L 28 L 28 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT R 29 R 29 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT V 30 V 30 13 16 40 6 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT T 31 T 31 13 16 40 5 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT E 32 E 32 13 16 40 3 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT R 33 R 33 4 16 40 2 3 5 7 14 19 20 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT P 34 P 34 3 16 40 0 3 5 5 7 10 18 21 24 29 31 32 34 34 38 39 39 40 40 41 LCS_GDT F 35 F 35 3 16 40 3 3 11 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT W 36 W 36 6 15 40 4 5 7 7 8 16 20 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT I 37 I 37 6 9 40 4 5 7 7 9 16 20 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT S 38 S 38 6 9 40 4 5 7 7 12 19 20 23 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT S 39 S 39 6 9 40 4 5 7 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT F 40 F 40 6 9 40 4 5 12 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT I 41 I 41 6 9 40 4 5 7 16 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 LCS_GDT G 42 G 42 6 9 40 3 3 7 8 10 16 19 23 24 27 29 30 33 34 35 38 39 40 40 41 LCS_GDT R 43 R 43 3 9 38 3 3 5 6 8 11 12 13 13 15 19 23 30 32 34 36 36 37 38 41 LCS_GDT S 44 S 44 0 9 36 0 0 3 5 8 11 12 13 13 15 17 20 24 26 30 32 34 35 36 38 LCS_GDT K 45 K 45 0 3 29 0 0 3 3 3 11 12 13 13 15 17 20 24 26 30 32 34 34 36 37 LCS_AVERAGE LCS_A: 46.56 ( 19.63 30.01 90.03 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 12 13 17 18 19 21 24 26 29 31 33 35 36 38 39 39 40 40 41 GDT PERCENT_AT 15.91 27.27 29.55 38.64 40.91 43.18 47.73 54.55 59.09 65.91 70.45 75.00 79.55 81.82 86.36 88.64 88.64 90.91 90.91 93.18 GDT RMS_LOCAL 0.13 0.67 0.74 1.44 1.49 1.76 2.13 2.42 2.68 3.18 3.39 3.91 4.09 4.23 4.48 4.60 4.60 4.82 4.82 5.10 GDT RMS_ALL_AT 11.61 6.54 6.69 6.36 6.37 6.50 6.20 6.30 6.26 6.96 6.81 6.56 6.62 6.68 6.78 6.67 6.67 6.50 6.50 6.38 # Checking swapping # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.397 0 0.499 0.531 12.230 0.000 0.000 - LGA V 3 V 3 6.331 0 0.644 0.807 7.842 5.000 3.117 4.922 LGA Q 4 Q 4 6.766 0 0.601 1.178 10.517 0.000 0.000 10.517 LGA G 5 G 5 7.460 0 0.095 0.095 7.460 0.000 0.000 - LGA P 6 P 6 7.355 0 0.037 0.133 9.154 0.000 0.000 9.154 LGA W 7 W 7 8.791 0 0.543 1.389 18.513 0.000 0.000 18.513 LGA V 8 V 8 6.873 0 0.238 0.904 8.022 2.727 1.558 7.999 LGA G 9 G 9 5.089 0 0.079 0.079 5.740 7.273 7.273 - LGA S 10 S 10 4.153 0 0.094 0.285 5.589 15.909 10.606 5.589 LGA S 11 S 11 1.599 0 0.073 0.153 4.966 44.091 32.727 4.966 LGA Y 12 Y 12 2.283 0 0.036 1.366 8.755 30.455 14.697 8.755 LGA V 13 V 13 4.955 0 0.079 0.996 7.798 7.273 4.156 7.798 LGA A 14 A 14 7.373 0 0.041 0.039 10.041 0.000 0.000 - LGA E 15 E 15 8.779 0 0.042 1.185 11.143 0.000 0.000 8.962 LGA T 16 T 16 9.233 0 0.165 0.200 10.475 0.000 0.000 5.005 LGA G 17 G 17 11.165 0 0.687 0.687 11.165 0.000 0.000 - LGA Q 18 Q 18 9.348 0 0.658 0.831 16.632 0.000 0.000 13.014 LGA N 19 N 19 4.129 0 0.049 1.260 7.121 15.455 9.091 7.121 LGA W 20 W 20 3.202 0 0.576 1.027 12.858 33.636 9.610 12.858 LGA A 21 A 21 1.209 0 0.118 0.131 1.541 70.000 72.364 - LGA S 22 S 22 0.823 0 0.060 0.651 1.593 81.818 73.939 1.215 LGA L 23 L 23 1.447 0 0.114 0.174 3.577 69.545 46.591 3.577 LGA A 24 A 24 1.460 0 0.071 0.087 1.727 65.455 62.545 - LGA A 25 A 25 0.796 0 0.025 0.031 1.171 77.727 78.545 - LGA N 26 N 26 0.748 0 0.080 0.538 2.042 77.727 72.273 1.217 LGA E 27 E 27 0.927 0 0.034 0.302 2.016 77.727 66.465 2.016 LGA L 28 L 28 1.308 0 0.146 0.310 3.425 65.909 47.273 3.071 LGA R 29 R 29 1.443 0 0.020 1.333 8.596 61.818 28.926 8.596 LGA V 30 V 30 1.146 0 0.177 0.148 2.571 73.636 58.701 2.292 LGA T 31 T 31 0.858 0 0.076 0.993 3.549 77.727 59.221 2.736 LGA E 32 E 32 0.482 0 0.631 1.646 5.949 74.545 48.081 5.724 LGA R 33 R 33 3.579 0 0.141 1.328 9.068 7.273 10.579 9.068 LGA P 34 P 34 6.483 0 0.579 0.652 8.230 0.000 0.000 7.903 LGA F 35 F 35 2.637 0 0.569 0.780 8.951 28.636 13.388 8.951 LGA W 36 W 36 3.852 0 0.667 0.661 11.283 19.091 5.455 11.283 LGA I 37 I 37 4.012 0 0.092 0.717 6.639 21.364 10.682 5.059 LGA S 38 S 38 4.432 0 0.022 0.127 6.386 7.273 4.848 5.999 LGA S 39 S 39 3.117 0 0.203 0.208 4.727 18.636 20.000 2.589 LGA F 40 F 40 1.688 0 0.198 0.928 9.335 58.182 23.802 9.335 LGA I 41 I 41 3.186 0 0.660 1.421 5.915 14.545 9.318 5.321 LGA G 42 G 42 7.411 0 0.169 0.169 11.138 0.000 0.000 - LGA R 43 R 43 10.803 0 0.583 1.544 17.590 0.000 0.000 17.590 LGA S 44 S 44 14.886 0 0.229 0.391 16.116 0.000 0.000 16.052 LGA K 45 K 45 15.551 0 0.527 0.921 17.676 0.000 0.000 17.676 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.161 6.131 7.419 27.510 20.587 8.416 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.42 52.273 47.066 0.953 LGA_LOCAL RMSD: 2.417 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.296 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.161 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.506272 * X + -0.859325 * Y + 0.072456 * Z + 101.226204 Y_new = 0.380007 * X + -0.297723 * Y + -0.875760 * Z + 97.447174 Z_new = 0.774134 * X + -0.415839 * Y + 0.477278 * Z + -63.204369 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.497709 -0.885346 -0.716715 [DEG: 143.1082 -50.7266 -41.0647 ] ZXZ: 0.082547 1.073242 2.063733 [DEG: 4.7296 61.4922 118.2432 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS261_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS261_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.42 47.066 6.16 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS261_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 17 N ALA 2 5.845 45.586 10.523 1.00 4.73 ATOM 19 CA ALA 2 6.872 45.807 11.543 1.00 4.73 ATOM 21 CB ALA 2 6.143 46.161 12.840 1.00 4.73 ATOM 25 C ALA 2 7.959 44.705 11.745 1.00 4.73 ATOM 26 O ALA 2 8.194 44.248 12.860 1.00 4.73 ATOM 27 N VAL 3 8.548 44.201 10.653 1.00 5.19 ATOM 29 CA VAL 3 8.535 42.740 10.484 1.00 5.19 ATOM 31 CB VAL 3 8.464 42.346 9.051 1.00 5.19 ATOM 33 CG1 VAL 3 8.747 40.881 8.813 1.00 5.19 ATOM 37 CG2 VAL 3 7.071 42.799 8.617 1.00 5.19 ATOM 41 C VAL 3 9.241 41.843 11.471 1.00 5.19 ATOM 42 O VAL 3 8.710 40.780 11.787 1.00 5.19 ATOM 43 N GLN 4 10.376 42.257 12.003 1.00 4.78 ATOM 45 CA GLN 4 11.268 41.426 12.810 1.00 4.78 ATOM 47 CB GLN 4 10.729 41.228 14.247 1.00 4.78 ATOM 50 CG GLN 4 10.717 42.503 15.115 1.00 4.78 ATOM 53 CD GLN 4 12.098 42.910 15.638 1.00 4.78 ATOM 54 OE1 GLN 4 13.085 42.946 14.922 1.00 4.78 ATOM 55 NE2 GLN 4 12.235 43.224 16.911 1.00 4.78 ATOM 58 C GLN 4 11.748 40.099 12.182 1.00 4.78 ATOM 59 O GLN 4 12.955 39.878 12.124 1.00 4.78 ATOM 60 N GLY 5 10.880 39.248 11.619 1.00 5.00 ATOM 62 CA GLY 5 11.297 38.026 10.935 1.00 5.00 ATOM 65 C GLY 5 10.480 37.542 9.749 1.00 5.00 ATOM 66 O GLY 5 9.412 38.055 9.448 1.00 5.00 ATOM 67 N PRO 6 11.005 36.590 8.967 1.00 4.41 ATOM 68 CD PRO 6 12.256 35.883 9.186 1.00 4.41 ATOM 71 CG PRO 6 12.495 35.066 7.922 1.00 4.41 ATOM 74 CB PRO 6 11.214 35.161 7.088 1.00 4.41 ATOM 77 CA PRO 6 10.213 35.932 7.932 1.00 4.41 ATOM 79 C PRO 6 9.223 34.954 8.581 1.00 4.41 ATOM 80 O PRO 6 8.252 34.555 7.932 1.00 4.41 ATOM 81 N TRP 7 9.477 34.551 9.838 1.00 4.08 ATOM 83 CA TRP 7 8.724 33.478 10.453 1.00 4.08 ATOM 85 CB TRP 7 9.277 32.977 11.798 1.00 4.08 ATOM 88 CG TRP 7 8.445 31.827 12.304 1.00 4.08 ATOM 89 CD1 TRP 7 8.425 30.584 11.763 1.00 4.08 ATOM 91 NE1 TRP 7 7.351 29.869 12.259 1.00 4.08 ATOM 93 CE2 TRP 7 6.674 30.587 13.221 1.00 4.08 ATOM 94 CZ2 TRP 7 5.544 30.306 13.999 1.00 4.08 ATOM 96 CH2 TRP 7 5.051 31.287 14.876 1.00 4.08 ATOM 98 CZ3 TRP 7 5.698 32.533 14.968 1.00 4.08 ATOM 100 CE3 TRP 7 6.834 32.807 14.177 1.00 4.08 ATOM 102 CD2 TRP 7 7.353 31.842 13.282 1.00 4.08 ATOM 103 C TRP 7 7.230 33.776 10.558 1.00 4.08 ATOM 104 O TRP 7 6.461 33.101 9.892 1.00 4.08 ATOM 105 N VAL 8 6.842 34.808 11.312 1.00 3.41 ATOM 107 CA VAL 8 5.440 35.175 11.535 1.00 3.41 ATOM 109 CB VAL 8 5.288 36.527 12.282 1.00 3.41 ATOM 111 CG1 VAL 8 5.032 36.293 13.773 1.00 3.41 ATOM 115 CG2 VAL 8 6.501 37.463 12.160 1.00 3.41 ATOM 119 C VAL 8 4.633 35.103 10.243 1.00 3.41 ATOM 120 O VAL 8 3.887 34.149 10.021 1.00 3.41 ATOM 121 N GLY 9 4.826 36.058 9.341 1.00 2.81 ATOM 123 CA GLY 9 3.961 36.092 8.178 1.00 2.81 ATOM 126 C GLY 9 4.277 35.043 7.107 1.00 2.81 ATOM 127 O GLY 9 3.371 34.345 6.672 1.00 2.81 ATOM 128 N SER 10 5.527 34.886 6.663 1.00 3.23 ATOM 130 CA SER 10 5.801 33.997 5.514 1.00 3.23 ATOM 132 CB SER 10 7.115 34.332 4.779 1.00 3.23 ATOM 135 OG SER 10 7.917 35.287 5.448 1.00 3.23 ATOM 137 C SER 10 5.818 32.514 5.905 1.00 3.23 ATOM 138 O SER 10 5.246 31.659 5.213 1.00 3.23 ATOM 139 N SER 11 6.477 32.215 7.031 1.00 3.72 ATOM 141 CA SER 11 6.420 30.843 7.530 1.00 3.72 ATOM 143 CB SER 11 7.431 30.573 8.637 1.00 3.72 ATOM 146 OG SER 11 7.805 29.218 8.681 1.00 3.72 ATOM 148 C SER 11 5.002 30.504 7.968 1.00 3.72 ATOM 149 O SER 11 4.476 29.525 7.450 1.00 3.72 ATOM 150 N TYR 12 4.314 31.328 8.786 1.00 2.71 ATOM 152 CA TYR 12 2.992 30.879 9.225 1.00 2.71 ATOM 154 CB TYR 12 2.527 31.508 10.545 1.00 2.71 ATOM 157 CG TYR 12 2.026 30.454 11.516 1.00 2.71 ATOM 158 CD1 TYR 12 2.945 29.521 12.033 1.00 2.71 ATOM 160 CE1 TYR 12 2.516 28.491 12.887 1.00 2.71 ATOM 162 CZ TYR 12 1.157 28.379 13.224 1.00 2.71 ATOM 163 OH TYR 12 0.735 27.372 14.032 1.00 2.71 ATOM 165 CE2 TYR 12 0.232 29.307 12.699 1.00 2.71 ATOM 167 CD2 TYR 12 0.664 30.347 11.855 1.00 2.71 ATOM 169 C TYR 12 1.932 30.843 8.104 1.00 2.71 ATOM 170 O TYR 12 1.066 29.957 8.149 1.00 2.71 ATOM 171 N VAL 13 2.042 31.683 7.044 1.00 2.68 ATOM 173 CA VAL 13 1.265 31.461 5.800 1.00 2.68 ATOM 175 CB VAL 13 1.316 32.538 4.683 1.00 2.68 ATOM 177 CG1 VAL 13 2.563 32.646 3.813 1.00 2.68 ATOM 181 CG2 VAL 13 0.146 32.339 3.707 1.00 2.68 ATOM 185 C VAL 13 1.502 30.055 5.266 1.00 2.68 ATOM 186 O VAL 13 0.550 29.261 5.179 1.00 2.68 ATOM 187 N ALA 14 2.766 29.724 4.980 1.00 3.71 ATOM 189 CA ALA 14 3.066 28.430 4.380 1.00 3.71 ATOM 191 CB ALA 14 4.571 28.374 4.092 1.00 3.71 ATOM 195 C ALA 14 2.617 27.228 5.234 1.00 3.71 ATOM 196 O ALA 14 2.149 26.226 4.696 1.00 3.71 ATOM 197 N GLU 15 2.722 27.347 6.557 1.00 3.93 ATOM 199 CA GLU 15 2.334 26.340 7.537 1.00 3.93 ATOM 201 CB GLU 15 2.925 26.723 8.915 1.00 3.93 ATOM 204 CG GLU 15 4.466 26.627 8.981 1.00 3.93 ATOM 207 CD GLU 15 5.067 27.291 10.237 1.00 3.93 ATOM 208 OE1 GLU 15 5.944 28.183 10.097 1.00 3.93 ATOM 209 OE2 GLU 15 4.711 26.879 11.361 1.00 3.93 ATOM 210 C GLU 15 0.811 26.159 7.641 1.00 3.93 ATOM 211 O GLU 15 0.380 25.038 7.919 1.00 3.93 ATOM 212 N THR 16 -0.025 27.199 7.438 1.00 4.12 ATOM 214 CA THR 16 -1.448 27.084 7.867 1.00 4.12 ATOM 216 CB THR 16 -1.621 27.431 9.363 1.00 4.12 ATOM 218 CG2 THR 16 -0.985 26.441 10.341 1.00 4.12 ATOM 222 OG1 THR 16 -1.086 28.683 9.672 1.00 4.12 ATOM 224 C THR 16 -2.507 27.777 6.993 1.00 4.12 ATOM 225 O THR 16 -3.650 27.949 7.438 1.00 4.12 ATOM 226 N GLY 17 -2.208 28.123 5.731 1.00 4.06 ATOM 228 CA GLY 17 -3.233 28.628 4.787 1.00 4.06 ATOM 231 C GLY 17 -3.995 29.830 5.373 1.00 4.06 ATOM 232 O GLY 17 -3.418 30.551 6.167 1.00 4.06 ATOM 233 N GLN 18 -5.287 30.067 5.096 1.00 3.56 ATOM 235 CA GLN 18 -6.026 31.190 5.740 1.00 3.56 ATOM 237 CB GLN 18 -7.485 31.239 5.255 1.00 3.56 ATOM 240 CG GLN 18 -7.651 31.554 3.753 1.00 3.56 ATOM 243 CD GLN 18 -7.337 33.004 3.362 1.00 3.56 ATOM 244 OE1 GLN 18 -6.369 33.611 3.785 1.00 3.56 ATOM 245 NE2 GLN 18 -8.134 33.609 2.509 1.00 3.56 ATOM 248 C GLN 18 -5.949 31.208 7.301 1.00 3.56 ATOM 249 O GLN 18 -5.931 32.265 7.964 1.00 3.56 ATOM 250 N ASN 19 -5.806 30.018 7.896 1.00 3.81 ATOM 252 CA ASN 19 -5.582 29.864 9.328 1.00 3.81 ATOM 254 CB ASN 19 -5.819 28.391 9.713 1.00 3.81 ATOM 257 CG ASN 19 -6.347 28.201 11.125 1.00 3.81 ATOM 258 OD1 ASN 19 -6.947 29.072 11.732 1.00 3.81 ATOM 259 ND2 ASN 19 -6.175 27.023 11.676 1.00 3.81 ATOM 262 C ASN 19 -4.215 30.426 9.783 1.00 3.81 ATOM 263 O ASN 19 -4.073 30.760 10.956 1.00 3.81 ATOM 264 N TRP 20 -3.274 30.659 8.857 1.00 3.88 ATOM 266 CA TRP 20 -2.094 31.522 9.054 1.00 3.88 ATOM 268 CB TRP 20 -1.352 31.884 7.756 1.00 3.88 ATOM 271 CG TRP 20 -1.706 33.064 6.825 1.00 3.88 ATOM 272 CD1 TRP 20 -2.857 33.271 6.133 1.00 3.88 ATOM 274 NE1 TRP 20 -2.753 34.334 5.276 1.00 3.88 ATOM 276 CE2 TRP 20 -1.563 34.979 5.444 1.00 3.88 ATOM 277 CZ2 TRP 20 -1.008 36.090 4.800 1.00 3.88 ATOM 279 CH2 TRP 20 0.223 36.577 5.250 1.00 3.88 ATOM 281 CZ3 TRP 20 0.819 35.996 6.381 1.00 3.88 ATOM 283 CE3 TRP 20 0.260 34.863 7.010 1.00 3.88 ATOM 285 CD2 TRP 20 -0.925 34.275 6.515 1.00 3.88 ATOM 286 C TRP 20 -2.413 32.828 9.686 1.00 3.88 ATOM 287 O TRP 20 -1.836 33.203 10.705 1.00 3.88 ATOM 288 N ALA 21 -3.321 33.529 9.021 1.00 2.18 ATOM 290 CA ALA 21 -3.485 34.929 9.323 1.00 2.18 ATOM 292 CB ALA 21 -4.312 35.600 8.221 1.00 2.18 ATOM 296 C ALA 21 -4.139 34.971 10.704 1.00 2.18 ATOM 297 O ALA 21 -3.655 35.645 11.620 1.00 2.18 ATOM 298 N SER 22 -5.195 34.168 10.889 1.00 2.56 ATOM 300 CA SER 22 -5.870 34.168 12.192 1.00 2.56 ATOM 302 CB SER 22 -7.100 33.258 12.143 1.00 2.56 ATOM 305 OG SER 22 -8.039 33.772 11.213 1.00 2.56 ATOM 307 C SER 22 -4.965 33.764 13.374 1.00 2.56 ATOM 308 O SER 22 -4.887 34.485 14.387 1.00 2.56 ATOM 309 N LEU 23 -4.266 32.635 13.236 1.00 2.88 ATOM 311 CA LEU 23 -3.418 32.078 14.282 1.00 2.88 ATOM 313 CB LEU 23 -2.919 30.676 13.893 1.00 2.88 ATOM 316 CG LEU 23 -4.000 29.579 13.873 1.00 2.88 ATOM 318 CD1 LEU 23 -3.413 28.276 13.330 1.00 2.88 ATOM 322 CD2 LEU 23 -4.545 29.283 15.270 1.00 2.88 ATOM 326 C LEU 23 -2.243 32.984 14.609 1.00 2.88 ATOM 327 O LEU 23 -2.089 33.365 15.762 1.00 2.88 ATOM 328 N ALA 24 -1.452 33.393 13.624 1.00 2.09 ATOM 330 CA ALA 24 -0.277 34.199 13.899 1.00 2.09 ATOM 332 CB ALA 24 0.711 34.046 12.745 1.00 2.09 ATOM 336 C ALA 24 -0.613 35.645 14.316 1.00 2.09 ATOM 337 O ALA 24 0.176 36.248 15.039 1.00 2.09 ATOM 338 N ALA 25 -1.772 36.212 13.953 1.00 1.53 ATOM 340 CA ALA 25 -2.203 37.481 14.565 1.00 1.53 ATOM 342 CB ALA 25 -3.416 38.015 13.816 1.00 1.53 ATOM 346 C ALA 25 -2.516 37.315 16.058 1.00 1.53 ATOM 347 O ALA 25 -2.076 38.129 16.884 1.00 1.53 ATOM 348 N ASN 26 -3.234 36.238 16.407 1.00 2.26 ATOM 350 CA ASN 26 -3.517 35.962 17.815 1.00 2.26 ATOM 352 CB ASN 26 -4.707 35.001 17.920 1.00 2.26 ATOM 355 CG ASN 26 -5.993 35.750 17.620 1.00 2.26 ATOM 356 OD1 ASN 26 -6.519 36.492 18.429 1.00 2.26 ATOM 357 ND2 ASN 26 -6.524 35.632 16.430 1.00 2.26 ATOM 360 C ASN 26 -2.285 35.522 18.637 1.00 2.26 ATOM 361 O ASN 26 -2.269 35.728 19.847 1.00 2.26 ATOM 362 N GLU 27 -1.211 35.045 17.999 1.00 3.05 ATOM 364 CA GLU 27 0.015 34.603 18.680 1.00 3.05 ATOM 366 CB GLU 27 0.512 33.274 18.083 1.00 3.05 ATOM 369 CG GLU 27 -0.361 32.082 18.522 1.00 3.05 ATOM 372 CD GLU 27 -0.410 31.990 20.050 1.00 3.05 ATOM 373 OE1 GLU 27 0.666 31.841 20.670 1.00 3.05 ATOM 374 OE2 GLU 27 -1.464 32.279 20.656 1.00 3.05 ATOM 375 C GLU 27 1.129 35.659 18.738 1.00 3.05 ATOM 376 O GLU 27 1.903 35.693 19.699 1.00 3.05 ATOM 377 N LEU 28 1.119 36.622 17.814 1.00 3.01 ATOM 379 CA LEU 28 1.670 37.958 18.058 1.00 3.01 ATOM 381 CB LEU 28 1.515 38.820 16.797 1.00 3.01 ATOM 384 CG LEU 28 2.662 38.731 15.790 1.00 3.01 ATOM 386 CD1 LEU 28 2.275 39.596 14.597 1.00 3.01 ATOM 390 CD2 LEU 28 3.980 39.279 16.351 1.00 3.01 ATOM 394 C LEU 28 0.963 38.684 19.212 1.00 3.01 ATOM 395 O LEU 28 1.544 39.592 19.804 1.00 3.01 ATOM 396 N ARG 29 -0.307 38.332 19.470 1.00 3.15 ATOM 398 CA ARG 29 -1.296 39.173 20.161 1.00 3.15 ATOM 400 CB ARG 29 -1.031 39.155 21.689 1.00 3.15 ATOM 403 CG ARG 29 -1.657 37.940 22.400 1.00 3.15 ATOM 406 CD ARG 29 -0.680 37.138 23.273 1.00 3.15 ATOM 409 NE ARG 29 0.221 36.255 22.502 1.00 3.15 ATOM 411 CZ ARG 29 0.047 34.960 22.284 1.00 3.15 ATOM 412 NH1 ARG 29 1.052 34.227 21.921 1.00 3.15 ATOM 415 NH2 ARG 29 -1.111 34.381 22.380 1.00 3.15 ATOM 418 C ARG 29 -1.438 40.578 19.548 1.00 3.15 ATOM 419 O ARG 29 -1.800 41.523 20.246 1.00 3.15 ATOM 420 N VAL 30 -1.242 40.730 18.230 1.00 2.80 ATOM 422 CA VAL 30 -1.695 41.957 17.541 1.00 2.80 ATOM 424 CB VAL 30 -0.835 42.379 16.334 1.00 2.80 ATOM 426 CG1 VAL 30 -1.387 43.667 15.703 1.00 2.80 ATOM 430 CG2 VAL 30 0.589 42.729 16.798 1.00 2.80 ATOM 434 C VAL 30 -3.195 41.803 17.254 1.00 2.80 ATOM 435 O VAL 30 -3.631 41.435 16.160 1.00 2.80 ATOM 436 N THR 31 -3.995 42.041 18.301 1.00 3.42 ATOM 438 CA THR 31 -5.463 41.881 18.349 1.00 3.42 ATOM 440 CB THR 31 -6.022 42.453 19.667 1.00 3.42 ATOM 442 CG2 THR 31 -7.454 42.016 19.972 1.00 3.42 ATOM 446 OG1 THR 31 -5.240 42.028 20.764 1.00 3.42 ATOM 448 C THR 31 -6.194 42.516 17.156 1.00 3.42 ATOM 449 O THR 31 -7.260 42.057 16.757 1.00 3.42 ATOM 450 N GLU 32 -5.591 43.536 16.538 1.00 3.29 ATOM 452 CA GLU 32 -6.035 44.210 15.311 1.00 3.29 ATOM 454 CB GLU 32 -5.226 45.517 15.148 1.00 3.29 ATOM 457 CG GLU 32 -6.070 46.767 14.839 1.00 3.29 ATOM 460 CD GLU 32 -6.880 46.678 13.538 1.00 3.29 ATOM 461 OE1 GLU 32 -6.379 47.080 12.461 1.00 3.29 ATOM 462 OE2 GLU 32 -8.031 46.184 13.571 1.00 3.29 ATOM 463 C GLU 32 -6.021 43.344 14.025 1.00 3.29 ATOM 464 O GLU 32 -6.238 43.866 12.936 1.00 3.29 ATOM 465 N ARG 33 -5.822 42.016 14.129 1.00 2.74 ATOM 467 CA ARG 33 -6.461 40.940 13.316 1.00 2.74 ATOM 469 CB ARG 33 -7.654 41.451 12.445 1.00 2.74 ATOM 472 CG ARG 33 -8.838 42.062 13.231 1.00 2.74 ATOM 475 CD ARG 33 -9.743 42.947 12.353 1.00 2.74 ATOM 478 NE ARG 33 -9.075 44.207 11.964 1.00 2.74 ATOM 480 CZ ARG 33 -8.636 44.598 10.784 1.00 2.74 ATOM 481 NH1 ARG 33 -7.920 45.671 10.675 1.00 2.74 ATOM 484 NH2 ARG 33 -8.904 43.949 9.683 1.00 2.74 ATOM 487 C ARG 33 -5.438 40.159 12.440 1.00 2.74 ATOM 488 O ARG 33 -4.292 40.581 12.220 1.00 2.74 ATOM 489 N PRO 34 -5.894 39.049 11.821 1.00 2.70 ATOM 490 CD PRO 34 -7.012 38.216 12.249 1.00 2.70 ATOM 493 CG PRO 34 -7.604 37.666 10.962 1.00 2.70 ATOM 496 CB PRO 34 -6.393 37.560 10.036 1.00 2.70 ATOM 499 CA PRO 34 -5.257 38.387 10.678 1.00 2.70 ATOM 501 C PRO 34 -4.547 39.288 9.655 1.00 2.70 ATOM 502 O PRO 34 -3.434 39.000 9.212 1.00 2.70 ATOM 503 N PHE 35 -5.172 40.420 9.331 1.00 2.66 ATOM 505 CA PHE 35 -4.576 41.484 8.526 1.00 2.66 ATOM 507 CB PHE 35 -5.585 42.643 8.485 1.00 2.66 ATOM 510 CG PHE 35 -5.061 43.936 7.891 1.00 2.66 ATOM 511 CD1 PHE 35 -4.589 43.973 6.564 1.00 2.66 ATOM 513 CE1 PHE 35 -4.083 45.170 6.033 1.00 2.66 ATOM 515 CZ PHE 35 -4.041 46.334 6.822 1.00 2.66 ATOM 517 CE2 PHE 35 -4.512 46.299 8.146 1.00 2.66 ATOM 519 CD2 PHE 35 -5.023 45.103 8.677 1.00 2.66 ATOM 521 C PHE 35 -3.211 41.942 9.061 1.00 2.66 ATOM 522 O PHE 35 -2.240 41.961 8.306 1.00 2.66 ATOM 523 N TRP 36 -3.092 42.236 10.356 1.00 2.41 ATOM 525 CA TRP 36 -1.823 42.662 10.930 1.00 2.41 ATOM 527 CB TRP 36 -2.014 43.315 12.295 1.00 2.41 ATOM 530 CG TRP 36 -2.415 44.754 12.222 1.00 2.41 ATOM 531 CD1 TRP 36 -3.641 45.201 11.892 1.00 2.41 ATOM 533 NE1 TRP 36 -3.697 46.573 12.001 1.00 2.41 ATOM 535 CE2 TRP 36 -2.468 47.095 12.343 1.00 2.41 ATOM 536 CZ2 TRP 36 -2.012 48.400 12.568 1.00 2.41 ATOM 538 CH2 TRP 36 -0.662 48.603 12.900 1.00 2.41 ATOM 540 CZ3 TRP 36 0.209 47.504 13.004 1.00 2.41 ATOM 542 CE3 TRP 36 -0.264 46.193 12.796 1.00 2.41 ATOM 544 CD2 TRP 36 -1.617 45.954 12.468 1.00 2.41 ATOM 545 C TRP 36 -0.753 41.599 10.976 1.00 2.41 ATOM 546 O TRP 36 0.403 41.990 10.882 1.00 2.41 ATOM 547 N ILE 37 -1.064 40.295 11.033 1.00 1.79 ATOM 549 CA ILE 37 0.046 39.326 10.795 1.00 1.79 ATOM 551 CB ILE 37 -0.191 37.992 11.483 1.00 1.79 ATOM 553 CG2 ILE 37 -1.092 37.053 10.683 1.00 1.79 ATOM 557 CG1 ILE 37 1.148 37.365 11.894 1.00 1.79 ATOM 560 CD1 ILE 37 1.893 36.569 10.840 1.00 1.79 ATOM 564 C ILE 37 0.471 39.241 9.316 1.00 1.79 ATOM 565 O ILE 37 1.668 39.196 8.975 1.00 1.79 ATOM 566 N SER 38 -0.514 39.343 8.417 1.00 2.63 ATOM 568 CA SER 38 -0.234 39.417 6.983 1.00 2.63 ATOM 570 CB SER 38 -1.528 39.295 6.165 1.00 2.63 ATOM 573 OG SER 38 -2.289 40.488 6.134 1.00 2.63 ATOM 575 C SER 38 0.542 40.672 6.563 1.00 2.63 ATOM 576 O SER 38 1.137 40.661 5.487 1.00 2.63 ATOM 577 N SER 39 0.584 41.720 7.397 1.00 3.13 ATOM 579 CA SER 39 1.555 42.805 7.274 1.00 3.13 ATOM 581 CB SER 39 0.954 44.160 7.681 1.00 3.13 ATOM 584 OG SER 39 0.953 44.369 9.076 1.00 3.13 ATOM 586 C SER 39 2.881 42.488 7.989 1.00 3.13 ATOM 587 O SER 39 3.949 42.630 7.384 1.00 3.13 ATOM 588 N PHE 40 2.832 41.922 9.204 1.00 2.55 ATOM 590 CA PHE 40 3.968 41.435 10.009 1.00 2.55 ATOM 592 CB PHE 40 3.521 41.007 11.418 1.00 2.55 ATOM 595 CG PHE 40 4.179 41.758 12.555 1.00 2.55 ATOM 596 CD1 PHE 40 3.428 42.676 13.312 1.00 2.55 ATOM 598 CE1 PHE 40 4.007 43.315 14.422 1.00 2.55 ATOM 600 CZ PHE 40 5.345 43.051 14.763 1.00 2.55 ATOM 602 CE2 PHE 40 6.103 42.153 13.993 1.00 2.55 ATOM 604 CD2 PHE 40 5.519 41.501 12.895 1.00 2.55 ATOM 606 C PHE 40 4.788 40.284 9.347 1.00 2.55 ATOM 607 O PHE 40 5.658 39.686 9.974 1.00 2.55 ATOM 608 N ILE 41 4.599 39.982 8.059 1.00 2.12 ATOM 610 CA ILE 41 5.592 39.300 7.171 1.00 2.12 ATOM 612 CB ILE 41 4.750 38.801 5.930 1.00 2.12 ATOM 614 CG2 ILE 41 4.134 39.897 5.031 1.00 2.12 ATOM 618 CG1 ILE 41 5.543 37.842 5.016 1.00 2.12 ATOM 621 CD1 ILE 41 4.660 37.038 4.049 1.00 2.12 ATOM 625 C ILE 41 6.709 40.105 6.537 1.00 2.12 ATOM 626 O ILE 41 7.773 39.557 6.251 1.00 2.12 ATOM 627 N GLY 42 6.385 41.357 6.240 1.00 3.64 ATOM 629 CA GLY 42 6.918 42.363 5.345 1.00 3.64 ATOM 632 C GLY 42 8.306 42.390 4.786 1.00 3.64 ATOM 633 O GLY 42 8.419 42.855 3.653 1.00 3.64 ATOM 634 N ARG 43 9.313 41.805 5.440 1.00 4.66 ATOM 636 CA ARG 43 10.623 41.491 4.822 1.00 4.66 ATOM 638 CB ARG 43 10.332 40.748 3.467 1.00 4.66 ATOM 641 CG ARG 43 9.150 39.728 3.361 1.00 4.66 ATOM 644 CD ARG 43 8.330 39.716 2.054 1.00 4.66 ATOM 647 NE ARG 43 7.837 41.066 1.740 1.00 4.66 ATOM 649 CZ ARG 43 6.601 41.504 1.597 1.00 4.66 ATOM 650 NH1 ARG 43 6.386 42.785 1.711 1.00 4.66 ATOM 653 NH2 ARG 43 5.583 40.721 1.359 1.00 4.66 ATOM 656 C ARG 43 11.449 42.785 4.597 1.00 4.66 ATOM 657 O ARG 43 12.595 42.724 4.990 1.00 4.66 ATOM 658 N SER 44 10.864 43.932 4.189 1.00 7.12 ATOM 660 CA SER 44 10.677 45.184 5.001 1.00 7.12 ATOM 662 CB SER 44 9.469 45.994 4.471 1.00 7.12 ATOM 665 OG SER 44 9.051 45.596 3.167 1.00 7.12 ATOM 667 C SER 44 10.466 44.735 6.450 1.00 7.12 ATOM 668 O SER 44 9.368 44.404 6.869 1.00 7.12 ATOM 669 N LYS 45 11.605 44.433 7.073 1.00 10.39 ATOM 671 CA LYS 45 11.993 43.808 8.366 1.00 10.39 ATOM 673 CB LYS 45 11.742 42.288 8.431 1.00 10.39 ATOM 676 CG LYS 45 12.969 41.354 8.497 1.00 10.39 ATOM 679 CD LYS 45 12.587 39.925 8.796 1.00 10.39 ATOM 682 CE LYS 45 12.304 39.103 7.555 1.00 10.39 ATOM 685 NZ LYS 45 10.879 39.148 7.136 1.00 10.39 ATOM 689 C LYS 45 13.508 44.075 8.353 1.00 10.39 ATOM 690 O LYS 45 14.056 44.732 9.232 1.00 10.39 TER END