####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS257_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS257_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 13 - 33 4.97 14.55 LCS_AVERAGE: 40.81 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 1.64 16.71 LCS_AVERAGE: 17.77 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.67 17.52 LCS_AVERAGE: 12.50 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 14 3 3 5 5 5 7 8 9 10 12 14 15 17 19 21 21 23 25 26 29 LCS_GDT V 3 V 3 3 7 14 3 4 5 5 6 6 8 8 9 12 14 15 17 19 21 21 23 25 25 29 LCS_GDT Q 4 Q 4 4 7 14 3 4 5 5 6 7 8 11 12 14 16 17 18 21 22 23 25 26 28 29 LCS_GDT G 5 G 5 4 7 14 3 4 5 5 6 7 11 11 12 14 16 17 18 21 24 24 25 26 28 29 LCS_GDT P 6 P 6 4 7 14 2 4 5 5 6 7 11 11 12 14 16 17 18 21 24 24 25 26 28 29 LCS_GDT W 7 W 7 4 7 14 3 4 5 5 6 7 11 11 12 14 16 17 18 21 24 24 25 26 28 29 LCS_GDT V 8 V 8 3 7 14 3 3 4 5 6 7 11 11 12 14 16 17 18 21 24 24 25 26 28 29 LCS_GDT G 9 G 9 3 7 14 3 3 5 5 6 7 8 9 12 14 16 17 18 21 24 24 25 26 28 29 LCS_GDT S 10 S 10 4 5 14 4 4 4 6 7 11 12 14 14 16 16 18 19 21 24 24 25 26 28 29 LCS_GDT S 11 S 11 4 5 14 4 4 4 6 7 11 12 14 14 16 16 18 20 21 24 24 25 26 28 29 LCS_GDT Y 12 Y 12 4 5 15 4 4 4 5 5 5 6 9 10 16 16 18 20 21 24 24 25 26 28 29 LCS_GDT V 13 V 13 5 5 21 4 4 5 5 5 9 11 12 14 15 16 19 20 21 24 24 25 26 28 29 LCS_GDT A 14 A 14 5 5 21 4 4 5 5 6 8 11 12 14 15 16 19 20 21 24 24 25 26 28 29 LCS_GDT E 15 E 15 5 5 21 4 4 5 5 5 7 11 11 12 14 16 19 19 21 24 24 25 26 28 29 LCS_GDT T 16 T 16 5 5 21 4 4 5 5 5 7 8 9 10 12 14 15 17 19 21 21 23 25 28 29 LCS_GDT G 17 G 17 5 5 21 3 4 5 5 5 6 7 9 12 14 16 19 20 21 22 22 23 25 28 29 LCS_GDT Q 18 Q 18 4 4 21 3 4 5 5 5 7 8 9 12 15 16 19 20 21 22 22 23 25 25 27 LCS_GDT N 19 N 19 4 11 21 3 3 4 5 6 9 12 14 14 16 16 19 20 21 22 22 25 26 28 29 LCS_GDT W 20 W 20 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 19 21 24 24 25 26 28 29 LCS_GDT A 21 A 21 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT S 22 S 22 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT L 23 L 23 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT A 24 A 24 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT A 25 A 25 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT N 26 N 26 10 12 21 5 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT E 27 E 27 10 12 21 4 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT L 28 L 28 10 12 21 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT R 29 R 29 10 12 21 4 8 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT V 30 V 30 4 12 21 3 4 5 6 11 12 12 13 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT T 31 T 31 4 12 21 3 4 5 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 LCS_GDT E 32 E 32 4 7 21 3 4 6 6 6 8 11 12 14 15 16 19 20 21 24 24 25 26 28 29 LCS_GDT R 33 R 33 4 7 21 3 3 6 6 6 8 9 11 12 14 15 17 20 21 22 22 24 26 27 29 LCS_GDT P 34 P 34 4 7 18 3 3 6 6 6 8 9 11 12 13 14 14 15 15 18 20 22 23 25 25 LCS_GDT F 35 F 35 4 7 16 3 3 6 6 6 8 9 11 12 13 14 14 15 15 15 17 19 21 23 24 LCS_GDT W 36 W 36 5 7 16 4 4 6 6 7 8 9 11 12 13 14 14 15 15 15 16 18 20 23 24 LCS_GDT I 37 I 37 5 7 16 4 4 5 6 7 7 9 11 12 13 14 14 15 15 15 16 18 20 23 24 LCS_GDT S 38 S 38 5 7 16 4 4 5 6 7 7 8 9 11 13 14 14 15 15 15 17 18 20 23 24 LCS_GDT S 39 S 39 5 7 16 4 4 6 6 7 8 8 9 12 13 14 14 15 15 15 16 17 20 21 23 LCS_GDT F 40 F 40 5 7 16 4 4 5 6 7 7 8 11 12 13 14 14 15 15 15 16 16 17 17 19 LCS_GDT I 41 I 41 5 7 16 4 4 5 6 7 7 9 11 12 13 14 14 15 15 15 16 17 20 21 22 LCS_GDT G 42 G 42 4 7 16 3 3 4 5 7 7 9 11 12 13 14 14 15 15 15 16 16 17 19 22 LCS_GDT R 43 R 43 4 5 16 0 3 4 4 6 8 9 11 12 13 14 14 15 15 15 16 16 17 17 19 LCS_GDT S 44 S 44 4 5 16 0 3 4 4 6 6 7 11 12 13 14 14 15 15 15 16 16 17 17 17 LCS_GDT K 45 K 45 3 3 16 0 3 3 3 3 3 6 9 11 12 14 14 15 15 15 16 16 16 16 16 LCS_AVERAGE LCS_A: 23.69 ( 12.50 17.77 40.81 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 10 10 11 12 12 14 14 16 16 19 20 21 24 24 25 26 28 29 GDT PERCENT_AT 13.64 20.45 22.73 22.73 25.00 27.27 27.27 31.82 31.82 36.36 36.36 43.18 45.45 47.73 54.55 54.55 56.82 59.09 63.64 65.91 GDT RMS_LOCAL 0.23 0.52 0.67 0.67 1.25 1.64 1.64 2.46 2.46 2.97 2.97 4.31 4.70 4.81 5.56 5.56 5.70 5.94 6.41 6.66 GDT RMS_ALL_AT 16.99 17.32 17.52 17.52 16.90 16.71 16.71 16.61 16.61 16.40 16.40 14.47 15.66 15.60 14.97 14.97 15.12 15.06 15.08 14.83 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 23.785 0 0.035 0.048 25.278 0.000 0.000 - LGA V 3 V 3 23.013 0 0.652 0.573 24.466 0.000 0.000 23.437 LGA Q 4 Q 4 21.613 0 0.051 0.448 27.033 0.000 0.000 23.987 LGA G 5 G 5 18.674 0 0.552 0.552 20.157 0.000 0.000 - LGA P 6 P 6 19.725 0 0.045 0.419 22.706 0.000 0.000 22.706 LGA W 7 W 7 14.988 0 0.374 0.365 20.550 0.000 0.000 19.411 LGA V 8 V 8 11.077 0 0.661 0.787 13.132 0.000 0.000 9.692 LGA G 9 G 9 7.557 0 0.064 0.064 8.067 0.000 0.000 - LGA S 10 S 10 2.996 0 0.650 0.702 4.159 14.091 15.758 3.683 LGA S 11 S 11 3.102 0 0.060 0.663 5.110 20.455 14.545 5.110 LGA Y 12 Y 12 5.573 0 0.054 1.422 13.529 2.727 0.909 13.529 LGA V 13 V 13 8.344 0 0.594 0.708 11.124 0.000 0.000 11.124 LGA A 14 A 14 10.993 0 0.080 0.083 14.028 0.000 0.000 - LGA E 15 E 15 15.251 0 0.043 1.176 20.815 0.000 0.000 20.815 LGA T 16 T 16 15.275 0 0.116 0.241 15.875 0.000 0.000 12.069 LGA G 17 G 17 12.018 0 0.511 0.511 12.777 0.000 0.000 - LGA Q 18 Q 18 9.184 0 0.646 0.958 15.935 0.000 0.000 13.722 LGA N 19 N 19 3.821 0 0.040 1.106 7.195 20.000 12.273 6.829 LGA W 20 W 20 3.379 0 0.622 1.154 14.768 32.273 9.221 14.768 LGA A 21 A 21 1.994 0 0.061 0.056 2.550 45.000 46.182 - LGA S 22 S 22 1.801 0 0.033 0.058 2.572 54.545 47.273 2.572 LGA L 23 L 23 1.942 0 0.035 1.008 6.340 54.545 32.727 3.655 LGA A 24 A 24 1.614 0 0.022 0.029 1.934 58.182 56.727 - LGA A 25 A 25 0.667 0 0.060 0.061 1.091 82.273 78.909 - LGA N 26 N 26 0.803 0 0.048 0.759 2.554 74.545 63.409 1.542 LGA E 27 E 27 1.804 0 0.044 0.793 3.074 45.455 39.394 3.074 LGA L 28 L 28 2.122 0 0.217 0.425 3.092 44.545 36.136 2.781 LGA R 29 R 29 1.896 0 0.524 1.262 11.616 39.545 14.876 11.400 LGA V 30 V 30 5.384 0 0.157 0.356 10.048 3.636 2.078 10.048 LGA T 31 T 31 3.760 0 0.085 0.827 5.456 3.182 3.377 5.209 LGA E 32 E 32 9.617 0 0.675 1.450 14.275 0.000 0.000 14.275 LGA R 33 R 33 13.113 0 0.070 1.177 15.545 0.000 0.000 14.120 LGA P 34 P 34 17.460 0 0.046 0.333 19.200 0.000 0.000 18.263 LGA F 35 F 35 20.010 0 0.644 1.199 25.306 0.000 0.000 25.306 LGA W 36 W 36 23.022 0 0.619 1.157 26.233 0.000 0.000 26.233 LGA I 37 I 37 22.177 0 0.089 1.530 23.389 0.000 0.000 20.310 LGA S 38 S 38 24.334 0 0.112 0.650 25.767 0.000 0.000 22.776 LGA S 39 S 39 24.513 0 0.140 0.706 25.641 0.000 0.000 23.379 LGA F 40 F 40 26.149 0 0.067 0.878 28.515 0.000 0.000 28.228 LGA I 41 I 41 27.802 0 0.606 1.411 28.770 0.000 0.000 26.453 LGA G 42 G 42 31.066 0 0.622 0.622 31.066 0.000 0.000 - LGA R 43 R 43 28.813 0 0.607 0.969 31.640 0.000 0.000 19.758 LGA S 44 S 44 30.608 0 0.654 0.604 30.832 0.000 0.000 30.377 LGA K 45 K 45 32.110 0 0.637 0.884 36.217 0.000 0.000 36.217 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 13.157 13.079 14.076 13.523 10.768 4.156 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.46 32.386 28.326 0.547 LGA_LOCAL RMSD: 2.461 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.610 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 13.157 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.261899 * X + 0.655196 * Y + -0.708609 * Z + -50.242393 Y_new = 0.657057 * X + 0.658843 * Y + 0.366336 * Z + 152.071732 Z_new = 0.706884 * X + -0.369653 * Y + -0.603052 * Z + 140.324692 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.950090 -0.785083 -2.591690 [DEG: 111.7319 -44.9820 -148.4929 ] ZXZ: -2.047935 2.218117 2.052622 [DEG: -117.3380 127.0888 117.6066 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS257_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS257_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.46 28.326 13.16 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS257_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 12 N ALA 2 -0.455 28.394 -5.184 1.00 15.00 N ATOM 14 CA ALA 2 -1.393 29.247 -5.935 1.00 15.00 C ATOM 15 CB ALA 2 -0.809 29.581 -7.307 1.00 15.00 C ATOM 16 C ALA 2 -2.764 28.569 -6.087 1.00 15.00 C ATOM 17 O ALA 2 -2.886 27.363 -5.838 1.00 15.00 O ATOM 18 N VAL 3 -3.782 29.353 -6.496 1.00 13.90 N ATOM 20 CA VAL 3 -5.208 28.955 -6.721 1.00 13.90 C ATOM 21 CB VAL 3 -5.400 27.891 -7.911 1.00 13.90 C ATOM 22 CG1 VAL 3 -6.876 27.774 -8.337 1.00 13.90 C ATOM 23 CG2 VAL 3 -4.557 28.279 -9.129 1.00 13.90 C ATOM 24 C VAL 3 -5.972 28.517 -5.437 1.00 13.90 C ATOM 25 O VAL 3 -7.182 28.755 -5.329 1.00 13.90 O ATOM 26 N GLN 4 -5.251 27.922 -4.476 1.00 12.54 N ATOM 28 CA GLN 4 -5.811 27.440 -3.197 1.00 12.54 C ATOM 29 CB GLN 4 -5.108 26.149 -2.754 1.00 12.54 C ATOM 30 CG GLN 4 -5.387 24.934 -3.636 1.00 12.54 C ATOM 31 CD GLN 4 -4.651 23.692 -3.170 1.00 12.54 C ATOM 32 OE1 GLN 4 -3.517 23.439 -3.578 1.00 12.54 O ATOM 33 NE2 GLN 4 -5.295 22.907 -2.312 1.00 12.54 N ATOM 36 C GLN 4 -5.718 28.492 -2.081 1.00 12.54 C ATOM 37 O GLN 4 -4.776 29.291 -2.056 1.00 12.54 O ATOM 38 N GLY 5 -6.704 28.478 -1.177 1.00 13.47 N ATOM 40 CA GLY 5 -6.754 29.420 -0.065 1.00 13.47 C ATOM 41 C GLY 5 -6.720 28.765 1.315 1.00 13.47 C ATOM 42 O GLY 5 -5.826 29.122 2.093 1.00 13.47 O ATOM 43 N PRO 6 -7.650 27.825 1.669 1.00 15.00 N ATOM 44 CD PRO 6 -8.858 27.436 0.906 1.00 15.00 C ATOM 45 CA PRO 6 -7.674 27.152 2.987 1.00 15.00 C ATOM 46 CB PRO 6 -8.903 26.247 2.881 1.00 15.00 C ATOM 47 CG PRO 6 -9.808 27.015 1.997 1.00 15.00 C ATOM 48 C PRO 6 -6.414 26.336 3.355 1.00 15.00 C ATOM 49 O PRO 6 -6.208 26.009 4.533 1.00 15.00 O ATOM 50 N TRP 7 -5.581 26.040 2.346 1.00 15.00 N ATOM 52 CA TRP 7 -4.332 25.272 2.502 1.00 15.00 C ATOM 53 CB TRP 7 -4.196 24.227 1.373 1.00 15.00 C ATOM 54 CG TRP 7 -5.279 23.122 1.335 1.00 15.00 C ATOM 55 CD2 TRP 7 -5.266 21.850 2.025 1.00 15.00 C ATOM 56 CE2 TRP 7 -6.453 21.160 1.651 1.00 15.00 C ATOM 57 CE3 TRP 7 -4.367 21.227 2.922 1.00 15.00 C ATOM 58 CD1 TRP 7 -6.442 23.135 0.598 1.00 15.00 C ATOM 59 NE1 TRP 7 -7.142 21.968 0.786 1.00 15.00 N ATOM 61 CZ2 TRP 7 -6.773 19.870 2.143 1.00 15.00 C ATOM 62 CZ3 TRP 7 -4.685 19.936 3.416 1.00 15.00 C ATOM 63 CH2 TRP 7 -5.882 19.276 3.019 1.00 15.00 C ATOM 64 C TRP 7 -3.091 26.182 2.528 1.00 15.00 C ATOM 65 O TRP 7 -3.042 27.187 1.806 1.00 15.00 O ATOM 66 N VAL 8 -2.113 25.823 3.374 1.00 15.00 N ATOM 68 CA VAL 8 -0.845 26.565 3.548 1.00 15.00 C ATOM 69 CB VAL 8 -0.554 26.901 5.073 1.00 15.00 C ATOM 70 CG1 VAL 8 0.478 28.036 5.204 1.00 15.00 C ATOM 71 CG2 VAL 8 -1.839 27.290 5.804 1.00 15.00 C ATOM 72 C VAL 8 0.307 25.725 2.955 1.00 15.00 C ATOM 73 O VAL 8 0.293 24.490 3.051 1.00 15.00 O ATOM 74 N GLY 9 1.267 26.408 2.325 1.00 13.60 N ATOM 76 CA GLY 9 2.415 25.748 1.716 1.00 13.60 C ATOM 77 C GLY 9 3.742 26.304 2.204 1.00 13.60 C ATOM 78 O GLY 9 4.608 25.537 2.640 1.00 13.60 O ATOM 79 N SER 10 3.890 27.633 2.127 1.00 10.09 N ATOM 81 CA SER 10 5.103 28.352 2.550 1.00 10.09 C ATOM 82 CB SER 10 5.567 29.316 1.449 1.00 10.09 C ATOM 83 OG SER 10 5.863 28.618 0.252 1.00 10.09 O ATOM 85 C SER 10 4.895 29.121 3.865 1.00 10.09 C ATOM 86 O SER 10 3.827 29.710 4.080 1.00 10.09 O ATOM 87 N SER 11 5.914 29.085 4.737 1.00 5.81 N ATOM 89 CA SER 11 5.925 29.756 6.055 1.00 5.81 C ATOM 90 OG SER 11 8.326 29.348 6.241 1.00 5.81 O ATOM 92 C SER 11 5.975 31.297 6.003 1.00 5.81 C ATOM 93 O SER 11 5.339 31.964 6.828 1.00 5.81 O ATOM 94 CB SER 11 7.082 29.222 6.910 1.00 5.81 C ATOM 95 N TYR 12 6.729 31.833 5.033 1.00 5.94 N ATOM 97 CA TYR 12 6.916 33.284 4.812 1.00 5.94 C ATOM 98 CB TYR 12 8.153 33.553 3.909 1.00 5.94 C ATOM 99 CG TYR 12 8.291 32.749 2.606 1.00 5.94 C ATOM 100 CD1 TYR 12 7.926 33.315 1.362 1.00 5.94 C ATOM 101 CE1 TYR 12 8.088 32.593 0.146 1.00 5.94 C ATOM 102 CD2 TYR 12 8.825 31.435 2.604 1.00 5.94 C ATOM 103 CE2 TYR 12 8.991 30.707 1.393 1.00 5.94 C ATOM 104 CZ TYR 12 8.620 31.295 0.173 1.00 5.94 C ATOM 105 OH TYR 12 8.779 30.596 -1.003 1.00 5.94 O ATOM 107 C TYR 12 5.681 34.078 4.329 1.00 5.94 C ATOM 108 O TYR 12 5.502 35.236 4.727 1.00 5.94 O ATOM 109 N VAL 13 4.850 33.449 3.484 1.00 5.53 N ATOM 111 CA VAL 13 3.617 34.054 2.924 1.00 5.53 C ATOM 112 CB VAL 13 3.212 33.408 1.534 1.00 5.53 C ATOM 113 CG1 VAL 13 2.242 34.321 0.759 1.00 5.53 C ATOM 114 CG2 VAL 13 4.442 33.130 0.676 1.00 5.53 C ATOM 115 C VAL 13 2.448 33.915 3.934 1.00 5.53 C ATOM 116 O VAL 13 2.346 32.898 4.635 1.00 5.53 O ATOM 117 N ALA 14 1.607 34.956 4.009 1.00 4.90 N ATOM 119 CA ALA 14 0.439 35.014 4.905 1.00 4.90 C ATOM 120 CB ALA 14 0.521 36.249 5.802 1.00 4.90 C ATOM 121 C ALA 14 -0.873 35.026 4.106 1.00 4.90 C ATOM 122 O ALA 14 -1.912 34.586 4.614 1.00 4.90 O ATOM 123 N GLU 15 -0.806 35.525 2.863 1.00 4.49 N ATOM 125 CA GLU 15 -1.949 35.628 1.928 1.00 4.49 C ATOM 126 CB GLU 15 -1.591 36.522 0.731 1.00 4.49 C ATOM 127 CG GLU 15 -1.417 38.001 1.067 1.00 4.49 C ATOM 128 CD GLU 15 -1.063 38.840 -0.147 1.00 4.49 C ATOM 129 OE1 GLU 15 -1.992 39.341 -0.816 1.00 4.49 O ATOM 130 OE2 GLU 15 0.143 39.001 -0.430 1.00 4.49 O ATOM 131 C GLU 15 -2.478 34.273 1.421 1.00 4.49 C ATOM 132 O GLU 15 -3.693 34.104 1.256 1.00 4.49 O ATOM 133 N THR 16 -1.557 33.326 1.185 1.00 5.04 N ATOM 135 CA THR 16 -1.855 31.959 0.697 1.00 5.04 C ATOM 136 CB THR 16 -0.564 31.232 0.210 1.00 5.04 C ATOM 137 OG1 THR 16 0.450 31.316 1.220 1.00 5.04 O ATOM 139 CG2 THR 16 -0.048 31.852 -1.085 1.00 5.04 C ATOM 140 C THR 16 -2.599 31.067 1.712 1.00 5.04 C ATOM 141 O THR 16 -3.487 30.294 1.328 1.00 5.04 O ATOM 142 N GLY 17 -2.247 31.210 2.994 1.00 4.72 N ATOM 144 CA GLY 17 -2.866 30.432 4.060 1.00 4.72 C ATOM 145 C GLY 17 -3.485 31.304 5.140 1.00 4.72 C ATOM 146 O GLY 17 -2.758 31.940 5.913 1.00 4.72 O ATOM 147 N GLN 18 -4.824 31.327 5.182 1.00 3.62 N ATOM 149 CA GLN 18 -5.625 32.106 6.148 1.00 3.62 C ATOM 150 CB GLN 18 -7.096 32.154 5.713 1.00 3.62 C ATOM 151 CG GLN 18 -7.365 32.978 4.458 1.00 3.62 C ATOM 152 CD GLN 18 -8.833 32.992 4.072 1.00 3.62 C ATOM 153 OE1 GLN 18 -9.589 33.866 4.496 1.00 3.62 O ATOM 154 NE2 GLN 18 -9.242 32.021 3.263 1.00 3.62 N ATOM 157 C GLN 18 -5.533 31.605 7.603 1.00 3.62 C ATOM 158 O GLN 18 -5.504 32.418 8.535 1.00 3.62 O ATOM 159 N ASN 19 -5.471 30.275 7.772 1.00 3.50 N ATOM 161 CA ASN 19 -5.378 29.598 9.084 1.00 3.50 C ATOM 162 CB ASN 19 -5.628 28.087 8.933 1.00 3.50 C ATOM 163 CG ASN 19 -7.049 27.763 8.486 1.00 3.50 C ATOM 164 OD1 ASN 19 -7.944 27.566 9.311 1.00 3.50 O ATOM 165 ND2 ASN 19 -7.258 27.689 7.173 1.00 3.50 N ATOM 168 C ASN 19 -4.038 29.837 9.805 1.00 3.50 C ATOM 169 O ASN 19 -4.023 30.080 11.018 1.00 3.50 O ATOM 170 N TRP 20 -2.934 29.781 9.043 1.00 3.58 N ATOM 172 CA TRP 20 -1.557 29.995 9.540 1.00 3.58 C ATOM 173 CB TRP 20 -0.531 29.573 8.459 1.00 3.58 C ATOM 174 CG TRP 20 0.900 29.212 8.953 1.00 3.58 C ATOM 175 CD2 TRP 20 2.011 30.111 9.173 1.00 3.58 C ATOM 176 CE2 TRP 20 3.116 29.315 9.587 1.00 3.58 C ATOM 177 CE3 TRP 20 2.181 31.512 9.062 1.00 3.58 C ATOM 178 CD1 TRP 20 1.376 27.952 9.236 1.00 3.58 C ATOM 179 NE1 TRP 20 2.696 28.013 9.615 1.00 3.58 N ATOM 181 CZ2 TRP 20 4.384 29.870 9.893 1.00 3.58 C ATOM 182 CZ3 TRP 20 3.448 32.070 9.368 1.00 3.58 C ATOM 183 CH2 TRP 20 4.530 31.241 9.779 1.00 3.58 C ATOM 184 C TRP 20 -1.343 31.469 9.948 1.00 3.58 C ATOM 185 O TRP 20 -0.695 31.745 10.966 1.00 3.58 O ATOM 186 N ALA 21 -1.914 32.388 9.153 1.00 3.79 N ATOM 188 CA ALA 21 -1.846 33.849 9.369 1.00 3.79 C ATOM 189 CB ALA 21 -2.351 34.587 8.133 1.00 3.79 C ATOM 190 C ALA 21 -2.637 34.287 10.614 1.00 3.79 C ATOM 191 O ALA 21 -2.154 35.112 11.399 1.00 3.79 O ATOM 192 N SER 22 -3.841 33.717 10.779 1.00 3.37 N ATOM 194 CA SER 22 -4.750 33.985 11.912 1.00 3.37 C ATOM 195 CB SER 22 -6.146 33.414 11.627 1.00 3.37 C ATOM 196 OG SER 22 -6.090 32.035 11.297 1.00 3.37 O ATOM 198 C SER 22 -4.208 33.434 13.246 1.00 3.37 C ATOM 199 O SER 22 -4.286 34.113 14.276 1.00 3.37 O ATOM 200 N LEU 23 -3.626 32.225 13.193 1.00 3.51 N ATOM 202 CA LEU 23 -3.036 31.526 14.354 1.00 3.51 C ATOM 203 CB LEU 23 -2.710 30.060 13.983 1.00 3.51 C ATOM 204 CG LEU 23 -2.783 28.886 14.986 1.00 3.51 C ATOM 205 CD1 LEU 23 -3.314 27.655 14.269 1.00 3.51 C ATOM 206 CD2 LEU 23 -1.422 28.584 15.636 1.00 3.51 C ATOM 207 C LEU 23 -1.769 32.267 14.842 1.00 3.51 C ATOM 208 O LEU 23 -1.564 32.408 16.052 1.00 3.51 O ATOM 209 N ALA 24 -0.946 32.724 13.886 1.00 3.86 N ATOM 211 CA ALA 24 0.303 33.473 14.135 1.00 3.86 C ATOM 212 CB ALA 24 1.135 33.545 12.859 1.00 3.86 C ATOM 213 C ALA 24 0.059 34.890 14.690 1.00 3.86 C ATOM 214 O ALA 24 0.778 35.336 15.592 1.00 3.86 O ATOM 215 N ALA 25 -0.958 35.571 14.140 1.00 3.93 N ATOM 217 CA ALA 25 -1.367 36.941 14.522 1.00 3.93 C ATOM 218 CB ALA 25 -2.327 37.508 13.485 1.00 3.93 C ATOM 219 C ALA 25 -1.985 37.048 15.928 1.00 3.93 C ATOM 220 O ALA 25 -1.728 38.023 16.643 1.00 3.93 O ATOM 221 N ASN 26 -2.792 36.045 16.302 1.00 3.93 N ATOM 223 CA ASN 26 -3.477 35.960 17.610 1.00 3.93 C ATOM 224 CB ASN 26 -4.575 34.887 17.575 1.00 3.93 C ATOM 225 CG ASN 26 -5.921 35.433 17.109 1.00 3.93 C ATOM 226 OD1 ASN 26 -6.779 35.769 17.926 1.00 3.93 O ATOM 227 ND2 ASN 26 -6.114 35.514 15.794 1.00 3.93 N ATOM 230 C ASN 26 -2.564 35.740 18.831 1.00 3.93 C ATOM 231 O ASN 26 -2.830 36.293 19.905 1.00 3.93 O ATOM 232 N GLU 27 -1.497 34.947 18.651 1.00 4.31 N ATOM 234 CA GLU 27 -0.516 34.618 19.710 1.00 4.31 C ATOM 235 CG GLU 27 0.866 33.151 18.005 1.00 4.31 C ATOM 236 CD GLU 27 1.546 31.809 17.808 1.00 4.31 C ATOM 237 OE1 GLU 27 0.878 30.869 17.328 1.00 4.31 O ATOM 238 OE2 GLU 27 2.747 31.695 18.131 1.00 4.31 O ATOM 239 C GLU 27 0.498 35.737 20.055 1.00 4.31 C ATOM 240 O GLU 27 1.005 35.787 21.185 1.00 4.31 O ATOM 241 CB GLU 27 0.209 33.286 19.396 1.00 4.31 C ATOM 242 N LEU 28 0.758 36.625 19.086 1.00 4.12 N ATOM 244 CA LEU 28 1.695 37.756 19.230 1.00 4.12 C ATOM 245 CB LEU 28 2.574 37.904 17.971 1.00 4.12 C ATOM 246 CG LEU 28 3.642 36.860 17.595 1.00 4.12 C ATOM 247 CD1 LEU 28 3.634 36.663 16.088 1.00 4.12 C ATOM 248 CD2 LEU 28 5.048 37.262 18.076 1.00 4.12 C ATOM 249 C LEU 28 0.978 39.085 19.523 1.00 4.12 C ATOM 250 O LEU 28 1.495 39.910 20.288 1.00 4.12 O ATOM 251 N ARG 29 -0.202 39.272 18.915 1.00 4.97 N ATOM 253 CA ARG 29 -1.032 40.483 19.078 1.00 4.97 C ATOM 254 CB ARG 29 -1.412 41.076 17.712 1.00 4.97 C ATOM 255 CG ARG 29 -0.244 41.683 16.930 1.00 4.97 C ATOM 256 CD ARG 29 -0.685 42.256 15.583 1.00 4.97 C ATOM 257 NE ARG 29 -1.511 43.460 15.718 1.00 4.97 N ATOM 259 CZ ARG 29 -2.025 44.156 14.704 1.00 4.97 C ATOM 260 NH1 ARG 29 -1.816 43.792 13.442 1.00 4.97 N ATOM 263 NH2 ARG 29 -2.758 45.232 14.956 1.00 4.97 N ATOM 266 C ARG 29 -2.305 40.187 19.888 1.00 4.97 C ATOM 267 O ARG 29 -2.899 39.111 19.742 1.00 4.97 O ATOM 268 N VAL 30 -2.695 41.142 20.747 1.00 5.45 N ATOM 270 CA VAL 30 -3.890 41.046 21.614 1.00 5.45 C ATOM 271 CB VAL 30 -3.540 41.289 23.143 1.00 5.45 C ATOM 272 CG1 VAL 30 -4.634 40.709 24.057 1.00 5.45 C ATOM 273 CG2 VAL 30 -2.189 40.666 23.502 1.00 5.45 C ATOM 274 C VAL 30 -4.929 42.086 21.130 1.00 5.45 C ATOM 275 O VAL 30 -4.551 43.127 20.576 1.00 5.45 O ATOM 276 N THR 31 -6.220 41.778 21.336 1.00 5.68 N ATOM 278 CA THR 31 -7.355 42.638 20.944 1.00 5.68 C ATOM 279 CB THR 31 -8.487 41.796 20.254 1.00 5.68 C ATOM 280 OG1 THR 31 -7.913 40.636 19.638 1.00 5.68 O ATOM 282 CG2 THR 31 -9.197 42.616 19.165 1.00 5.68 C ATOM 283 C THR 31 -7.923 43.370 22.183 1.00 5.68 C ATOM 284 O THR 31 -8.463 44.480 22.058 1.00 5.68 O ATOM 285 N GLU 32 -7.757 42.755 23.363 1.00 6.80 N ATOM 287 CA GLU 32 -8.234 43.293 24.653 1.00 6.80 C ATOM 288 CB GLU 32 -8.826 42.167 25.536 1.00 6.80 C ATOM 289 CG GLU 32 -7.995 40.874 25.681 1.00 6.80 C ATOM 290 CD GLU 32 -8.668 39.842 26.566 1.00 6.80 C ATOM 291 OE1 GLU 32 -9.436 39.013 26.034 1.00 6.80 O ATOM 292 OE2 GLU 32 -8.428 39.859 27.791 1.00 6.80 O ATOM 293 C GLU 32 -7.192 44.128 25.433 1.00 6.80 C ATOM 294 O GLU 32 -7.565 45.026 26.198 1.00 6.80 O ATOM 295 N ARG 33 -5.904 43.826 25.214 1.00 6.72 N ATOM 297 CA ARG 33 -4.771 44.511 25.866 1.00 6.72 C ATOM 298 CB ARG 33 -3.734 43.492 26.364 1.00 6.72 C ATOM 299 CG ARG 33 -4.197 42.626 27.532 1.00 6.72 C ATOM 300 CD ARG 33 -3.114 41.648 27.959 1.00 6.72 C ATOM 301 NE ARG 33 -3.541 40.808 29.080 1.00 6.72 N ATOM 303 CZ ARG 33 -2.797 39.865 29.660 1.00 6.72 C ATOM 304 NH1 ARG 33 -3.298 39.168 30.671 1.00 6.72 N ATOM 307 NH2 ARG 33 -1.560 39.610 29.243 1.00 6.72 N ATOM 310 C ARG 33 -4.090 45.534 24.919 1.00 6.72 C ATOM 311 O ARG 33 -4.025 45.275 23.711 1.00 6.72 O ATOM 312 N PRO 34 -3.608 46.714 25.432 1.00 6.39 N ATOM 313 CD PRO 34 -2.745 47.484 24.505 1.00 6.39 C ATOM 314 CA PRO 34 -3.563 47.332 26.781 1.00 6.39 C ATOM 315 CB PRO 34 -2.561 48.484 26.604 1.00 6.39 C ATOM 316 CG PRO 34 -2.662 48.839 25.152 1.00 6.39 C ATOM 317 C PRO 34 -4.908 47.802 27.402 1.00 6.39 C ATOM 318 O PRO 34 -5.919 47.899 26.697 1.00 6.39 O ATOM 319 N PHE 35 -4.885 48.068 28.716 1.00 5.93 N ATOM 321 CA PHE 35 -6.035 48.520 29.527 1.00 5.93 C ATOM 322 CB PHE 35 -5.689 48.401 31.038 1.00 5.93 C ATOM 323 CG PHE 35 -6.889 48.150 31.960 1.00 5.93 C ATOM 324 CD1 PHE 35 -7.299 46.831 32.272 1.00 5.93 C ATOM 325 CD2 PHE 35 -7.586 49.230 32.552 1.00 5.93 C ATOM 326 CE1 PHE 35 -8.386 46.588 33.157 1.00 5.93 C ATOM 327 CE2 PHE 35 -8.675 49.004 33.439 1.00 5.93 C ATOM 328 CZ PHE 35 -9.075 47.679 33.741 1.00 5.93 C ATOM 329 C PHE 35 -6.526 49.948 29.202 1.00 5.93 C ATOM 330 O PHE 35 -7.734 50.210 29.261 1.00 5.93 O ATOM 331 N TRP 36 -5.586 50.847 28.871 1.00 6.17 N ATOM 333 CA TRP 36 -5.852 52.267 28.546 1.00 6.17 C ATOM 334 CB TRP 36 -4.513 53.015 28.319 1.00 6.17 C ATOM 335 CG TRP 36 -4.520 54.556 28.546 1.00 6.17 C ATOM 336 CD2 TRP 36 -4.854 55.585 27.588 1.00 6.17 C ATOM 337 CE2 TRP 36 -4.680 56.838 28.244 1.00 6.17 C ATOM 338 CE3 TRP 36 -5.285 55.576 26.241 1.00 6.17 C ATOM 339 CD1 TRP 36 -4.170 55.217 29.701 1.00 6.17 C ATOM 340 NE1 TRP 36 -4.264 56.576 29.523 1.00 6.17 N ATOM 342 CZ2 TRP 36 -4.921 58.076 27.601 1.00 6.17 C ATOM 343 CZ3 TRP 36 -5.526 56.814 25.594 1.00 6.17 C ATOM 344 CH2 TRP 36 -5.340 58.045 26.283 1.00 6.17 C ATOM 345 C TRP 36 -6.801 52.474 27.342 1.00 6.17 C ATOM 346 O TRP 36 -7.739 53.275 27.434 1.00 6.17 O ATOM 347 N ILE 37 -6.565 51.736 26.245 1.00 6.11 N ATOM 349 CA ILE 37 -7.389 51.804 25.016 1.00 6.11 C ATOM 350 CB ILE 37 -6.673 51.161 23.759 1.00 6.11 C ATOM 351 CG2 ILE 37 -5.568 52.108 23.265 1.00 6.11 C ATOM 352 CG1 ILE 37 -6.125 49.747 24.061 1.00 6.11 C ATOM 353 CD1 ILE 37 -6.213 48.753 22.895 1.00 6.11 C ATOM 354 C ILE 37 -8.813 51.232 25.208 1.00 6.11 C ATOM 355 O ILE 37 -9.791 51.811 24.712 1.00 6.11 O ATOM 356 N SER 38 -8.902 50.127 25.966 1.00 6.32 N ATOM 358 CA SER 38 -10.165 49.428 26.287 1.00 6.32 C ATOM 359 CB SER 38 -9.876 48.068 26.931 1.00 6.32 C ATOM 360 OG SER 38 -9.128 47.237 26.058 1.00 6.32 O ATOM 362 C SER 38 -11.061 50.272 27.213 1.00 6.32 C ATOM 363 O SER 38 -12.279 50.333 27.012 1.00 6.32 O ATOM 364 N SER 39 -10.436 50.910 28.216 1.00 5.64 N ATOM 366 CA SER 39 -11.099 51.788 29.202 1.00 5.64 C ATOM 367 CB SER 39 -10.159 52.079 30.376 1.00 5.64 C ATOM 368 OG SER 39 -9.784 50.884 31.040 1.00 5.64 O ATOM 370 C SER 39 -11.592 53.112 28.586 1.00 5.64 C ATOM 371 O SER 39 -12.670 53.601 28.946 1.00 5.64 O ATOM 372 N PHE 40 -10.790 53.670 27.665 1.00 6.09 N ATOM 374 CA PHE 40 -11.074 54.932 26.949 1.00 6.09 C ATOM 375 CB PHE 40 -9.793 55.435 26.225 1.00 6.09 C ATOM 376 CG PHE 40 -9.722 56.952 26.009 1.00 6.09 C ATOM 377 CD1 PHE 40 -10.229 57.540 24.825 1.00 6.09 C ATOM 378 CD2 PHE 40 -9.114 57.794 26.972 1.00 6.09 C ATOM 379 CE1 PHE 40 -10.133 58.942 24.600 1.00 6.09 C ATOM 380 CE2 PHE 40 -9.011 59.196 26.762 1.00 6.09 C ATOM 381 CZ PHE 40 -9.522 59.771 25.572 1.00 6.09 C ATOM 382 C PHE 40 -12.250 54.815 25.952 1.00 6.09 C ATOM 383 O PHE 40 -13.093 55.715 25.888 1.00 6.09 O ATOM 384 N ILE 41 -12.285 53.711 25.188 1.00 6.96 N ATOM 386 CA ILE 41 -13.332 53.428 24.180 1.00 6.96 C ATOM 387 CB ILE 41 -12.849 52.303 23.153 1.00 6.96 C ATOM 388 CG2 ILE 41 -12.713 50.917 23.849 1.00 6.96 C ATOM 389 CG1 ILE 41 -13.742 52.272 21.893 1.00 6.96 C ATOM 390 CD1 ILE 41 -13.012 51.942 20.584 1.00 6.96 C ATOM 391 C ILE 41 -14.722 53.137 24.812 1.00 6.96 C ATOM 392 O ILE 41 -15.740 53.640 24.326 1.00 6.96 O ATOM 393 N GLY 42 -14.731 52.333 25.879 1.00 7.05 N ATOM 395 CA GLY 42 -15.964 51.977 26.570 1.00 7.05 C ATOM 396 C GLY 42 -15.863 50.639 27.282 1.00 7.05 C ATOM 397 O GLY 42 -14.834 50.346 27.903 1.00 7.05 O ATOM 398 N ARG 43 -16.929 49.830 27.167 1.00 7.47 N ATOM 400 CA ARG 43 -17.090 48.475 27.761 1.00 7.47 C ATOM 401 CB ARG 43 -16.099 47.451 27.163 1.00 7.47 C ATOM 402 CG ARG 43 -16.338 47.118 25.689 1.00 7.47 C ATOM 403 CD ARG 43 -15.329 46.104 25.154 1.00 7.47 C ATOM 404 NE ARG 43 -15.517 44.762 25.716 1.00 7.47 N ATOM 406 CZ ARG 43 -14.776 43.694 25.419 1.00 7.47 C ATOM 407 NH1 ARG 43 -13.770 43.773 24.553 1.00 7.47 N ATOM 410 NH2 ARG 43 -15.045 42.531 25.996 1.00 7.47 N ATOM 413 C ARG 43 -17.084 48.373 29.301 1.00 7.47 C ATOM 414 O ARG 43 -17.928 47.672 29.872 1.00 7.47 O ATOM 415 N SER 44 -16.137 49.069 29.948 1.00 7.52 N ATOM 417 CA SER 44 -15.981 49.086 31.415 1.00 7.52 C ATOM 418 CB SER 44 -14.509 48.894 31.795 1.00 7.52 C ATOM 419 OG SER 44 -14.014 47.657 31.312 1.00 7.52 O ATOM 421 C SER 44 -16.514 50.383 32.044 1.00 7.52 C ATOM 422 O SER 44 -17.056 50.352 33.155 1.00 7.52 O ATOM 423 N LYS 45 -16.371 51.503 31.311 1.00 8.13 N ATOM 425 CA LYS 45 -16.796 52.883 31.689 1.00 8.13 C ATOM 426 CG LYS 45 -19.121 52.834 30.564 1.00 8.13 C ATOM 427 CD LYS 45 -20.619 52.967 30.815 1.00 8.13 C ATOM 428 CE LYS 45 -21.436 52.801 29.534 1.00 8.13 C ATOM 429 NZ LYS 45 -21.258 53.921 28.563 1.00 8.13 N ATOM 433 C LYS 45 -16.086 53.526 32.897 1.00 8.13 C ATOM 434 O LYS 45 -15.743 54.712 32.845 1.00 8.13 O ATOM 435 CB LYS 45 -18.327 53.003 31.855 1.00 8.13 C TER END