####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS257_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS257_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 2 - 25 4.95 17.34 LCS_AVERAGE: 47.11 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 2 - 10 1.88 19.37 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.76 18.23 LCS_AVERAGE: 16.01 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.56 18.79 LCS_AVERAGE: 11.47 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 9 24 3 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT V 3 V 3 5 9 24 3 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT Q 4 Q 4 5 9 24 4 5 6 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT G 5 G 5 5 9 24 4 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT P 6 P 6 5 9 24 4 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT W 7 W 7 5 9 24 4 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT V 8 V 8 5 9 24 1 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT G 9 G 9 5 9 24 4 5 7 8 9 11 12 12 12 15 15 16 19 20 23 24 26 28 29 29 LCS_GDT S 10 S 10 5 9 24 4 5 5 7 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT S 11 S 11 5 6 24 4 5 5 7 8 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT Y 12 Y 12 5 6 24 4 5 7 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT V 13 V 13 5 6 24 4 5 7 8 8 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT A 14 A 14 4 6 24 3 4 4 5 6 7 8 11 12 15 18 20 21 22 24 25 27 28 29 29 LCS_GDT E 15 E 15 4 5 24 3 4 4 5 6 7 8 8 10 13 13 16 18 21 23 25 27 28 29 29 LCS_GDT T 16 T 16 4 5 24 3 4 4 5 6 7 9 11 15 16 17 19 20 22 24 25 27 28 29 29 LCS_GDT G 17 G 17 4 5 24 3 4 4 5 8 9 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT Q 18 Q 18 4 4 24 3 4 4 5 8 9 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT N 19 N 19 4 4 24 3 4 4 5 6 8 9 10 10 12 15 19 21 22 24 25 27 28 29 29 LCS_GDT W 20 W 20 8 9 24 6 8 8 8 8 9 9 10 10 13 15 18 19 22 24 25 27 28 29 29 LCS_GDT A 21 A 21 8 9 24 6 8 8 8 8 9 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT S 22 S 22 8 9 24 6 8 8 8 8 9 12 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT L 23 L 23 8 9 24 6 8 8 8 8 9 10 13 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT A 24 A 24 8 9 24 6 8 8 8 8 9 9 10 10 12 15 20 21 22 24 25 27 28 29 29 LCS_GDT A 25 A 25 8 9 24 6 8 8 8 8 9 9 10 15 16 18 20 21 22 24 25 27 28 29 29 LCS_GDT N 26 N 26 8 9 17 5 8 8 8 8 9 9 10 10 11 16 20 21 22 24 25 27 28 29 29 LCS_GDT E 27 E 27 8 9 17 3 8 8 8 8 9 11 13 14 15 15 16 17 17 18 23 25 26 29 29 LCS_GDT L 28 L 28 4 9 17 4 4 4 5 7 9 11 12 13 15 15 16 17 22 24 24 26 28 29 29 LCS_GDT R 29 R 29 4 5 17 4 4 4 5 5 9 11 12 14 15 15 18 20 22 24 25 27 28 29 29 LCS_GDT V 30 V 30 4 5 17 4 4 4 5 7 9 11 13 14 15 15 18 20 22 24 25 27 28 29 29 LCS_GDT T 31 T 31 4 5 17 4 4 4 5 5 8 11 13 14 15 15 16 20 22 24 25 27 28 29 29 LCS_GDT E 32 E 32 3 5 17 3 3 4 5 7 9 11 13 14 15 15 16 17 17 22 24 26 27 28 29 LCS_GDT R 33 R 33 3 5 17 2 3 4 5 7 9 11 13 14 15 15 16 17 17 18 18 22 25 26 27 LCS_GDT P 34 P 34 3 5 17 2 3 4 5 7 9 11 13 14 15 15 16 17 17 18 18 19 20 22 24 LCS_GDT F 35 F 35 3 7 17 3 3 4 4 5 8 11 13 14 15 15 16 17 17 18 18 19 20 22 23 LCS_GDT W 36 W 36 5 7 17 4 4 5 6 7 9 11 13 14 15 15 16 17 17 18 18 19 20 22 23 LCS_GDT I 37 I 37 5 7 17 4 4 5 6 7 9 11 13 14 15 15 16 17 17 18 18 19 20 22 23 LCS_GDT S 38 S 38 5 7 17 4 4 5 6 7 8 10 13 14 15 15 16 17 17 18 18 19 20 22 23 LCS_GDT S 39 S 39 5 7 17 4 4 5 6 7 8 9 13 14 15 15 16 17 17 18 18 19 20 22 23 LCS_GDT F 40 F 40 5 7 17 4 4 5 6 7 8 9 13 14 15 15 16 17 17 18 18 19 20 21 23 LCS_GDT I 41 I 41 5 7 17 4 4 5 6 7 8 10 13 14 15 15 16 17 17 18 18 19 20 22 23 LCS_GDT G 42 G 42 4 7 17 3 4 4 5 7 8 8 9 9 12 15 15 17 17 18 18 19 20 21 23 LCS_GDT R 43 R 43 4 5 17 3 4 4 4 5 6 6 9 9 12 12 13 14 14 14 16 16 16 19 21 LCS_GDT S 44 S 44 4 5 15 3 4 4 4 5 5 7 9 9 12 12 13 14 14 14 16 16 16 19 19 LCS_GDT K 45 K 45 4 5 15 3 4 4 4 5 5 7 9 9 12 12 13 14 14 14 15 15 16 17 17 LCS_AVERAGE LCS_A: 24.86 ( 11.47 16.01 47.11 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 8 8 9 11 12 13 15 16 18 20 21 22 24 25 27 28 29 29 GDT PERCENT_AT 13.64 18.18 18.18 18.18 20.45 25.00 27.27 29.55 34.09 36.36 40.91 45.45 47.73 50.00 54.55 56.82 61.36 63.64 65.91 65.91 GDT RMS_LOCAL 0.19 0.56 0.56 0.56 1.59 2.06 2.29 2.64 2.95 3.16 3.66 4.20 4.39 4.46 4.99 5.18 5.62 5.76 5.97 5.97 GDT RMS_ALL_AT 18.47 18.79 18.79 18.79 19.75 18.79 18.40 17.81 17.74 17.65 17.44 17.39 17.37 17.21 16.40 16.43 16.13 16.44 16.13 16.13 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 1.985 0 0.052 0.065 3.382 31.364 38.182 - LGA V 3 V 3 1.440 0 0.053 0.124 3.762 59.091 43.117 2.728 LGA Q 4 Q 4 1.243 0 0.041 0.892 7.574 67.273 34.343 4.911 LGA G 5 G 5 1.113 0 0.103 0.103 2.629 53.182 53.182 - LGA P 6 P 6 2.267 0 0.037 0.398 4.990 45.455 30.909 4.990 LGA W 7 W 7 2.534 0 0.373 0.928 6.357 30.455 27.273 5.837 LGA V 8 V 8 3.483 0 0.651 0.876 6.623 11.818 7.532 6.341 LGA G 9 G 9 6.568 0 0.302 0.302 6.568 0.909 0.909 - LGA S 10 S 10 4.378 0 0.000 0.709 6.531 10.909 7.273 6.531 LGA S 11 S 11 3.745 0 0.046 0.046 4.562 20.455 14.848 4.273 LGA Y 12 Y 12 2.370 0 0.080 0.925 7.561 41.818 16.818 7.561 LGA V 13 V 13 0.886 0 0.556 1.267 4.873 53.182 43.377 2.362 LGA A 14 A 14 6.920 0 0.117 0.120 9.111 1.364 1.091 - LGA E 15 E 15 9.893 0 0.000 1.172 17.105 0.000 0.000 17.105 LGA T 16 T 16 6.186 0 0.116 0.993 6.746 1.818 1.039 6.324 LGA G 17 G 17 3.623 0 0.299 0.299 4.765 10.455 10.455 - LGA Q 18 Q 18 3.553 0 0.651 0.959 7.045 5.455 3.030 5.822 LGA N 19 N 19 8.739 0 0.073 0.994 10.509 0.000 0.000 10.384 LGA W 20 W 20 8.621 0 0.632 1.180 14.223 0.000 0.000 14.223 LGA A 21 A 21 5.158 0 0.056 0.056 6.577 5.455 4.364 - LGA S 22 S 22 3.452 0 0.019 0.626 4.603 10.455 13.333 2.795 LGA L 23 L 23 5.511 0 0.033 1.044 8.114 1.364 0.682 7.413 LGA A 24 A 24 8.015 0 0.029 0.035 9.060 0.000 0.000 - LGA A 25 A 25 6.693 0 0.053 0.056 9.978 0.000 0.000 - LGA N 26 N 26 10.182 0 0.076 0.899 13.885 0.000 0.000 7.269 LGA E 27 E 27 14.504 0 0.058 0.787 18.741 0.000 0.000 17.044 LGA L 28 L 28 12.700 0 0.614 0.552 14.545 0.000 0.000 13.050 LGA R 29 R 29 11.287 0 0.337 1.385 19.182 0.000 0.000 19.182 LGA V 30 V 30 10.439 0 0.602 1.311 12.544 0.000 0.000 12.544 LGA T 31 T 31 11.685 0 0.094 1.052 14.202 0.000 0.000 12.862 LGA E 32 E 32 16.340 0 0.700 1.115 18.487 0.000 0.000 17.624 LGA R 33 R 33 19.730 0 0.050 1.201 21.421 0.000 0.000 21.040 LGA P 34 P 34 23.062 0 0.664 0.649 25.922 0.000 0.000 25.922 LGA F 35 F 35 26.550 0 0.632 1.217 31.595 0.000 0.000 31.595 LGA W 36 W 36 27.018 0 0.615 1.155 27.018 0.000 0.000 25.836 LGA I 37 I 37 26.947 0 0.078 1.545 28.879 0.000 0.000 27.267 LGA S 38 S 38 32.506 0 0.113 0.650 34.343 0.000 0.000 33.300 LGA S 39 S 39 29.773 0 0.147 0.238 30.398 0.000 0.000 26.717 LGA F 40 F 40 27.839 0 0.058 0.882 29.502 0.000 0.000 23.195 LGA I 41 I 41 32.041 0 0.609 1.662 35.355 0.000 0.000 35.111 LGA G 42 G 42 36.036 0 0.556 0.556 36.036 0.000 0.000 - LGA R 43 R 43 36.286 0 0.642 1.245 37.950 0.000 0.000 36.444 LGA S 44 S 44 36.614 0 0.100 0.633 37.218 0.000 0.000 37.218 LGA K 45 K 45 37.565 0 0.093 0.727 40.499 0.000 0.000 33.911 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 13.436 13.440 14.196 10.506 7.994 2.909 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.64 30.682 27.139 0.474 LGA_LOCAL RMSD: 2.640 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.814 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 13.436 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.731989 * X + 0.510574 * Y + 0.451116 * Z + -134.739090 Y_new = 0.303508 * X + -0.348434 * Y + 0.886835 * Z + 89.079506 Z_new = 0.609980 * X + 0.786071 * Y + 0.100086 * Z + 127.945084 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.748534 -0.656035 1.444153 [DEG: 157.4794 -37.5880 82.7439 ] ZXZ: 2.671024 1.470542 0.659925 [DEG: 153.0384 84.2559 37.8109 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS257_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS257_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.64 27.139 13.44 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS257_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 13.822 36.722 12.489 1.00 15.00 N ATOM 14 CA ALA 2 12.384 36.675 12.810 1.00 15.00 C ATOM 15 CB ALA 2 12.127 37.311 14.173 1.00 15.00 C ATOM 16 C ALA 2 11.544 37.374 11.733 1.00 15.00 C ATOM 17 O ALA 2 11.988 38.372 11.155 1.00 15.00 O ATOM 18 N VAL 3 10.328 36.848 11.494 1.00 15.00 N ATOM 20 CA VAL 3 9.314 37.325 10.503 1.00 15.00 C ATOM 21 CB VAL 3 8.586 38.683 10.946 1.00 15.00 C ATOM 22 CG1 VAL 3 7.280 38.904 10.158 1.00 15.00 C ATOM 23 CG2 VAL 3 8.279 38.675 12.444 1.00 15.00 C ATOM 24 C VAL 3 9.831 37.419 9.041 1.00 15.00 C ATOM 25 O VAL 3 10.922 37.951 8.791 1.00 15.00 O ATOM 26 N GLN 4 9.034 36.887 8.103 1.00 15.00 N ATOM 28 CA GLN 4 9.346 36.877 6.660 1.00 15.00 C ATOM 29 CB GLN 4 9.258 35.451 6.091 1.00 15.00 C ATOM 30 CG GLN 4 10.344 34.499 6.580 1.00 15.00 C ATOM 31 CD GLN 4 10.218 33.113 5.979 1.00 15.00 C ATOM 32 OE1 GLN 4 10.799 32.822 4.934 1.00 15.00 O ATOM 33 NE2 GLN 4 9.456 32.247 6.640 1.00 15.00 N ATOM 36 C GLN 4 8.414 37.806 5.874 1.00 15.00 C ATOM 37 O GLN 4 7.237 37.952 6.227 1.00 15.00 O ATOM 38 N GLY 5 8.955 38.431 4.825 1.00 15.00 N ATOM 40 CA GLY 5 8.191 39.344 3.984 1.00 15.00 C ATOM 41 C GLY 5 9.089 40.186 3.081 1.00 15.00 C ATOM 42 O GLY 5 10.166 40.567 3.553 1.00 15.00 O ATOM 43 N PRO 6 8.721 40.490 1.796 1.00 15.00 N ATOM 44 CD PRO 6 9.552 41.489 1.092 1.00 15.00 C ATOM 45 CA PRO 6 7.539 40.171 0.961 1.00 15.00 C ATOM 46 CB PRO 6 7.770 41.019 -0.296 1.00 15.00 C ATOM 47 CG PRO 6 8.544 42.178 0.206 1.00 15.00 C ATOM 48 C PRO 6 7.377 38.678 0.591 1.00 15.00 C ATOM 49 O PRO 6 6.299 38.260 0.147 1.00 15.00 O ATOM 50 N TRP 7 8.445 37.897 0.809 1.00 15.00 N ATOM 52 CA TRP 7 8.491 36.452 0.519 1.00 15.00 C ATOM 53 CB TRP 7 9.855 36.090 -0.124 1.00 15.00 C ATOM 54 CG TRP 7 9.933 34.754 -0.917 1.00 15.00 C ATOM 55 CD2 TRP 7 10.383 33.470 -0.431 1.00 15.00 C ATOM 56 CE2 TRP 7 10.312 32.561 -1.526 1.00 15.00 C ATOM 57 CE3 TRP 7 10.843 32.996 0.820 1.00 15.00 C ATOM 58 CD1 TRP 7 9.619 34.564 -2.244 1.00 15.00 C ATOM 59 NE1 TRP 7 9.844 33.258 -2.608 1.00 15.00 N ATOM 61 CZ2 TRP 7 10.682 31.199 -1.412 1.00 15.00 C ATOM 62 CZ3 TRP 7 11.213 31.633 0.936 1.00 15.00 C ATOM 63 CH2 TRP 7 11.127 30.754 -0.180 1.00 15.00 C ATOM 64 C TRP 7 8.248 35.626 1.801 1.00 15.00 C ATOM 65 O TRP 7 8.735 35.992 2.879 1.00 15.00 O ATOM 66 N VAL 8 7.482 34.531 1.661 1.00 13.24 N ATOM 68 CA VAL 8 7.130 33.613 2.763 1.00 13.24 C ATOM 69 CB VAL 8 5.539 33.465 2.905 1.00 13.24 C ATOM 70 CG1 VAL 8 4.900 32.816 1.660 1.00 13.24 C ATOM 71 CG2 VAL 8 5.148 32.735 4.201 1.00 13.24 C ATOM 72 C VAL 8 7.855 32.254 2.598 1.00 13.24 C ATOM 73 O VAL 8 8.027 31.774 1.470 1.00 13.24 O ATOM 74 N GLY 9 8.286 31.680 3.725 1.00 9.93 N ATOM 76 CA GLY 9 8.985 30.400 3.728 1.00 9.93 C ATOM 77 C GLY 9 8.387 29.389 4.693 1.00 9.93 C ATOM 78 O GLY 9 7.180 29.118 4.645 1.00 9.93 O ATOM 79 N SER 10 9.242 28.840 5.566 1.00 8.20 N ATOM 81 CA SER 10 8.864 27.839 6.578 1.00 8.20 C ATOM 82 CB SER 10 9.838 26.651 6.533 1.00 8.20 C ATOM 83 OG SER 10 9.400 25.578 7.355 1.00 8.20 O ATOM 85 C SER 10 8.844 28.459 7.989 1.00 8.20 C ATOM 86 O SER 10 8.149 27.954 8.879 1.00 8.20 O ATOM 87 N SER 11 9.608 29.546 8.170 1.00 7.58 N ATOM 89 CA SER 11 9.730 30.288 9.444 1.00 7.58 C ATOM 90 OG SER 11 11.219 31.820 10.644 1.00 7.58 O ATOM 92 C SER 11 8.455 31.052 9.859 1.00 7.58 C ATOM 93 O SER 11 8.132 31.112 11.052 1.00 7.58 O ATOM 94 CB SER 11 10.924 31.252 9.377 1.00 7.58 C ATOM 95 N TYR 12 7.751 31.623 8.870 1.00 8.41 N ATOM 97 CA TYR 12 6.510 32.406 9.058 1.00 8.41 C ATOM 98 CB TYR 12 6.181 33.192 7.757 1.00 8.41 C ATOM 99 CG TYR 12 5.286 34.437 7.884 1.00 8.41 C ATOM 100 CD1 TYR 12 3.877 34.340 7.756 1.00 8.41 C ATOM 101 CE1 TYR 12 3.047 35.493 7.839 1.00 8.41 C ATOM 102 CD2 TYR 12 5.843 35.721 8.099 1.00 8.41 C ATOM 103 CE2 TYR 12 5.021 36.879 8.183 1.00 8.41 C ATOM 104 CZ TYR 12 3.628 36.753 8.052 1.00 8.41 C ATOM 105 OH TYR 12 2.826 37.869 8.133 1.00 8.41 O ATOM 107 C TYR 12 5.286 31.576 9.516 1.00 8.41 C ATOM 108 O TYR 12 4.584 31.993 10.442 1.00 8.41 O ATOM 109 N VAL 13 5.070 30.418 8.864 1.00 6.88 N ATOM 111 CA VAL 13 3.967 29.436 9.095 1.00 6.88 C ATOM 112 CB VAL 13 4.506 28.029 9.576 1.00 6.88 C ATOM 113 CG1 VAL 13 5.108 27.276 8.401 1.00 6.88 C ATOM 114 CG2 VAL 13 5.547 28.172 10.707 1.00 6.88 C ATOM 115 C VAL 13 2.691 29.815 9.897 1.00 6.88 C ATOM 116 O VAL 13 2.782 30.313 11.028 1.00 6.88 O ATOM 117 N ALA 14 1.524 29.561 9.289 1.00 5.59 N ATOM 119 CA ALA 14 0.204 29.848 9.879 1.00 5.59 C ATOM 120 CB ALA 14 -0.603 30.757 8.948 1.00 5.59 C ATOM 121 C ALA 14 -0.574 28.555 10.168 1.00 5.59 C ATOM 122 O ALA 14 -1.513 28.561 10.975 1.00 5.59 O ATOM 123 N GLU 15 -0.160 27.456 9.520 1.00 4.90 N ATOM 125 CA GLU 15 -0.772 26.114 9.651 1.00 4.90 C ATOM 126 CB GLU 15 -0.262 25.178 8.546 1.00 4.90 C ATOM 127 CG GLU 15 -0.741 25.526 7.139 1.00 4.90 C ATOM 128 CD GLU 15 -0.212 24.571 6.086 1.00 4.90 C ATOM 129 OE1 GLU 15 -0.884 23.555 5.810 1.00 4.90 O ATOM 130 OE2 GLU 15 0.875 24.839 5.530 1.00 4.90 O ATOM 131 C GLU 15 -0.576 25.445 11.026 1.00 4.90 C ATOM 132 O GLU 15 -1.488 24.772 11.521 1.00 4.90 O ATOM 133 N THR 16 0.609 25.645 11.622 1.00 5.38 N ATOM 135 CA THR 16 0.993 25.090 12.941 1.00 5.38 C ATOM 136 CB THR 16 2.563 25.142 13.158 1.00 5.38 C ATOM 137 OG1 THR 16 2.899 24.659 14.466 1.00 5.38 O ATOM 139 CG2 THR 16 3.136 26.565 12.961 1.00 5.38 C ATOM 140 C THR 16 0.223 25.684 14.148 1.00 5.38 C ATOM 141 O THR 16 -0.118 24.957 15.089 1.00 5.38 O ATOM 142 N GLY 17 -0.049 26.991 14.086 1.00 4.66 N ATOM 144 CA GLY 17 -0.765 27.683 15.149 1.00 4.66 C ATOM 145 C GLY 17 -1.983 28.436 14.641 1.00 4.66 C ATOM 146 O GLY 17 -2.043 29.667 14.741 1.00 4.66 O ATOM 147 N GLN 18 -2.948 27.680 14.100 1.00 3.68 N ATOM 149 CA GLN 18 -4.216 28.185 13.540 1.00 3.68 C ATOM 150 CB GLN 18 -4.911 27.091 12.716 1.00 3.68 C ATOM 151 CG GLN 18 -4.206 26.726 11.414 1.00 3.68 C ATOM 152 CD GLN 18 -4.934 25.643 10.640 1.00 3.68 C ATOM 153 OE1 GLN 18 -5.783 25.931 9.799 1.00 3.68 O ATOM 154 NE2 GLN 18 -4.603 24.387 10.923 1.00 3.68 N ATOM 157 C GLN 18 -5.208 28.763 14.566 1.00 3.68 C ATOM 158 O GLN 18 -5.891 29.750 14.273 1.00 3.68 O ATOM 159 N ASN 19 -5.262 28.151 15.759 1.00 3.73 N ATOM 161 CA ASN 19 -6.166 28.551 16.862 1.00 3.73 C ATOM 162 CB ASN 19 -6.133 27.510 18.006 1.00 3.73 C ATOM 163 CG ASN 19 -4.712 27.133 18.446 1.00 3.73 C ATOM 164 OD1 ASN 19 -4.144 27.752 19.348 1.00 3.73 O ATOM 165 ND2 ASN 19 -4.146 26.108 17.814 1.00 3.73 N ATOM 168 C ASN 19 -5.990 29.983 17.417 1.00 3.73 C ATOM 169 O ASN 19 -6.985 30.706 17.567 1.00 3.73 O ATOM 170 N TRP 20 -4.738 30.384 17.692 1.00 3.74 N ATOM 172 CA TRP 20 -4.406 31.729 18.206 1.00 3.74 C ATOM 173 CB TRP 20 -2.979 31.775 18.812 1.00 3.74 C ATOM 174 CG TRP 20 -1.784 31.363 17.911 1.00 3.74 C ATOM 175 CD2 TRP 20 -1.039 32.202 16.998 1.00 3.74 C ATOM 176 CE2 TRP 20 0.005 31.402 16.453 1.00 3.74 C ATOM 177 CE3 TRP 20 -1.150 33.551 16.587 1.00 3.74 C ATOM 178 CD1 TRP 20 -1.174 30.132 17.872 1.00 3.74 C ATOM 179 NE1 TRP 20 -0.106 30.155 17.007 1.00 3.74 N ATOM 181 CZ2 TRP 20 0.939 31.904 15.515 1.00 3.74 C ATOM 182 CZ3 TRP 20 -0.216 34.056 15.649 1.00 3.74 C ATOM 183 CH2 TRP 20 0.814 33.225 15.126 1.00 3.74 C ATOM 184 C TRP 20 -4.618 32.837 17.155 1.00 3.74 C ATOM 185 O TRP 20 -5.071 33.938 17.491 1.00 3.74 O ATOM 186 N ALA 21 -4.299 32.511 15.892 1.00 3.92 N ATOM 188 CA ALA 21 -4.441 33.411 14.729 1.00 3.92 C ATOM 189 CB ALA 21 -3.723 32.823 13.518 1.00 3.92 C ATOM 190 C ALA 21 -5.918 33.684 14.394 1.00 3.92 C ATOM 191 O ALA 21 -6.295 34.834 14.134 1.00 3.92 O ATOM 192 N SER 22 -6.735 32.620 14.427 1.00 3.47 N ATOM 194 CA SER 22 -8.186 32.667 14.154 1.00 3.47 C ATOM 195 CB SER 22 -8.749 31.251 13.993 1.00 3.47 C ATOM 196 OG SER 22 -8.121 30.573 12.919 1.00 3.47 O ATOM 198 C SER 22 -8.956 33.417 15.255 1.00 3.47 C ATOM 199 O SER 22 -9.843 34.221 14.950 1.00 3.47 O ATOM 200 N LEU 23 -8.561 33.184 16.518 1.00 3.49 N ATOM 202 CA LEU 23 -9.159 33.805 17.721 1.00 3.49 C ATOM 203 CB LEU 23 -8.627 33.110 18.997 1.00 3.49 C ATOM 204 CG LEU 23 -9.404 33.026 20.331 1.00 3.49 C ATOM 205 CD1 LEU 23 -9.134 31.677 20.978 1.00 3.49 C ATOM 206 CD2 LEU 23 -9.035 34.168 21.293 1.00 3.49 C ATOM 207 C LEU 23 -8.851 35.320 17.744 1.00 3.49 C ATOM 208 O LEU 23 -9.726 36.126 18.084 1.00 3.49 O ATOM 209 N ALA 24 -7.607 35.675 17.389 1.00 3.53 N ATOM 211 CA ALA 24 -7.115 37.065 17.317 1.00 3.53 C ATOM 212 CB ALA 24 -5.598 37.078 17.179 1.00 3.53 C ATOM 213 C ALA 24 -7.762 37.837 16.152 1.00 3.53 C ATOM 214 O ALA 24 -8.044 39.033 16.274 1.00 3.53 O ATOM 215 N ALA 25 -7.974 37.132 15.032 1.00 3.90 N ATOM 217 CA ALA 25 -8.582 37.668 13.800 1.00 3.90 C ATOM 218 CB ALA 25 -8.343 36.711 12.639 1.00 3.90 C ATOM 219 C ALA 25 -10.078 38.019 13.892 1.00 3.90 C ATOM 220 O ALA 25 -10.494 39.061 13.369 1.00 3.90 O ATOM 221 N ASN 26 -10.868 37.156 14.550 1.00 3.64 N ATOM 223 CA ASN 26 -12.327 37.346 14.700 1.00 3.64 C ATOM 224 CB ASN 26 -13.046 36.017 15.048 1.00 3.64 C ATOM 225 CG ASN 26 -12.453 35.288 16.269 1.00 3.64 C ATOM 226 OD1 ASN 26 -12.086 34.119 16.175 1.00 3.64 O ATOM 227 ND2 ASN 26 -12.416 35.961 17.419 1.00 3.64 N ATOM 230 C ASN 26 -12.864 38.494 15.583 1.00 3.64 C ATOM 231 O ASN 26 -13.739 39.237 15.129 1.00 3.64 O ATOM 232 N GLU 27 -12.341 38.645 16.813 1.00 3.90 N ATOM 234 CA GLU 27 -12.774 39.699 17.770 1.00 3.90 C ATOM 235 CG GLU 27 -14.508 38.010 18.844 1.00 3.90 C ATOM 236 CD GLU 27 -15.929 37.864 19.355 1.00 3.90 C ATOM 237 OE1 GLU 27 -16.156 38.104 20.559 1.00 3.90 O ATOM 238 OE2 GLU 27 -16.817 37.508 18.553 1.00 3.90 O ATOM 239 C GLU 27 -11.812 40.006 18.939 1.00 3.90 C ATOM 240 O GLU 27 -11.872 41.104 19.511 1.00 3.90 O ATOM 241 CB GLU 27 -14.208 39.431 18.321 1.00 3.90 C ATOM 242 N LEU 28 -10.936 39.039 19.276 1.00 4.57 N ATOM 244 CA LEU 28 -9.932 39.090 20.383 1.00 4.57 C ATOM 245 CB LEU 28 -8.989 40.320 20.302 1.00 4.57 C ATOM 246 CG LEU 28 -7.962 40.511 19.175 1.00 4.57 C ATOM 247 CD1 LEU 28 -7.984 41.962 18.722 1.00 4.57 C ATOM 248 CD2 LEU 28 -6.545 40.105 19.610 1.00 4.57 C ATOM 249 C LEU 28 -10.551 39.015 21.793 1.00 4.57 C ATOM 250 O LEU 28 -11.639 39.559 22.019 1.00 4.57 O ATOM 251 N ARG 29 -9.849 38.343 22.716 1.00 5.68 N ATOM 253 CA ARG 29 -10.280 38.169 24.118 1.00 5.68 C ATOM 254 CB ARG 29 -10.178 36.696 24.543 1.00 5.68 C ATOM 255 CG ARG 29 -11.204 35.774 23.894 1.00 5.68 C ATOM 256 CD ARG 29 -11.071 34.350 24.412 1.00 5.68 C ATOM 257 NE ARG 29 -12.049 33.447 23.799 1.00 5.68 N ATOM 259 CZ ARG 29 -12.159 32.144 24.061 1.00 5.68 C ATOM 260 NH1 ARG 29 -13.088 31.429 23.440 1.00 5.68 N ATOM 263 NH2 ARG 29 -11.354 31.546 24.934 1.00 5.68 N ATOM 266 C ARG 29 -9.461 39.044 25.079 1.00 5.68 C ATOM 267 O ARG 29 -10.006 39.549 26.066 1.00 5.68 O ATOM 268 N VAL 30 -8.168 39.231 24.751 1.00 7.02 N ATOM 270 CA VAL 30 -7.144 40.025 25.492 1.00 7.02 C ATOM 271 CB VAL 30 -7.028 41.532 24.926 1.00 7.02 C ATOM 272 CG1 VAL 30 -8.275 42.375 25.252 1.00 7.02 C ATOM 273 CG2 VAL 30 -5.730 42.219 25.382 1.00 7.02 C ATOM 274 C VAL 30 -7.124 39.934 27.052 1.00 7.02 C ATOM 275 O VAL 30 -6.130 39.470 27.624 1.00 7.02 O ATOM 276 N THR 31 -8.213 40.373 27.702 1.00 7.53 N ATOM 278 CA THR 31 -8.369 40.365 29.171 1.00 7.53 C ATOM 279 CB THR 31 -9.089 41.683 29.688 1.00 7.53 C ATOM 280 OG1 THR 31 -9.306 41.606 31.103 1.00 7.53 O ATOM 282 CG2 THR 31 -10.428 41.949 28.962 1.00 7.53 C ATOM 283 C THR 31 -9.058 39.085 29.707 1.00 7.53 C ATOM 284 O THR 31 -8.748 38.629 30.816 1.00 7.53 O ATOM 285 N GLU 32 -9.974 38.522 28.897 1.00 8.67 N ATOM 287 CA GLU 32 -10.775 37.294 29.171 1.00 8.67 C ATOM 288 CB GLU 32 -9.882 36.037 29.316 1.00 8.67 C ATOM 289 CG GLU 32 -9.170 35.610 28.036 1.00 8.67 C ATOM 290 CD GLU 32 -8.308 34.376 28.228 1.00 8.67 C ATOM 291 OE1 GLU 32 -8.823 33.253 28.040 1.00 8.67 O ATOM 292 OE2 GLU 32 -7.115 34.529 28.565 1.00 8.67 O ATOM 293 C GLU 32 -11.791 37.368 30.336 1.00 8.67 C ATOM 294 O GLU 32 -12.680 36.508 30.440 1.00 8.67 O ATOM 295 N ARG 33 -11.679 38.415 31.167 1.00 8.35 N ATOM 297 CA ARG 33 -12.558 38.644 32.330 1.00 8.35 C ATOM 298 CB ARG 33 -11.749 39.165 33.528 1.00 8.35 C ATOM 299 CG ARG 33 -10.786 38.147 34.143 1.00 8.35 C ATOM 300 CD ARG 33 -10.013 38.725 35.329 1.00 8.35 C ATOM 301 NE ARG 33 -9.035 39.741 34.930 1.00 8.35 N ATOM 303 CZ ARG 33 -8.229 40.401 35.764 1.00 8.35 C ATOM 304 NH1 ARG 33 -7.383 41.301 35.280 1.00 8.35 N ATOM 307 NH2 ARG 33 -8.257 40.173 37.074 1.00 8.35 N ATOM 310 C ARG 33 -13.726 39.615 32.019 1.00 8.35 C ATOM 311 O ARG 33 -13.511 40.615 31.321 1.00 8.35 O ATOM 312 N PRO 34 -14.973 39.328 32.511 1.00 7.63 N ATOM 313 CD PRO 34 -15.412 38.062 33.149 1.00 7.63 C ATOM 314 CA PRO 34 -16.147 40.198 32.265 1.00 7.63 C ATOM 315 CB PRO 34 -17.322 39.337 32.750 1.00 7.63 C ATOM 316 CG PRO 34 -16.710 38.441 33.798 1.00 7.63 C ATOM 317 C PRO 34 -16.144 41.603 32.925 1.00 7.63 C ATOM 318 O PRO 34 -16.819 42.519 32.438 1.00 7.63 O ATOM 319 N PHE 35 -15.377 41.743 34.017 1.00 6.93 N ATOM 321 CA PHE 35 -15.238 42.989 34.801 1.00 6.93 C ATOM 322 CB PHE 35 -14.539 42.684 36.156 1.00 6.93 C ATOM 323 CG PHE 35 -14.908 43.631 37.304 1.00 6.93 C ATOM 324 CD1 PHE 35 -14.151 44.802 37.549 1.00 6.93 C ATOM 325 CD2 PHE 35 -15.991 43.336 38.168 1.00 6.93 C ATOM 326 CE1 PHE 35 -14.464 45.666 38.635 1.00 6.93 C ATOM 327 CE2 PHE 35 -16.316 44.190 39.258 1.00 6.93 C ATOM 328 CZ PHE 35 -15.549 45.358 39.492 1.00 6.93 C ATOM 329 C PHE 35 -14.494 44.122 34.058 1.00 6.93 C ATOM 330 O PHE 35 -14.874 45.294 34.183 1.00 6.93 O ATOM 331 N TRP 36 -13.464 43.755 33.280 1.00 7.53 N ATOM 333 CA TRP 36 -12.626 44.693 32.501 1.00 7.53 C ATOM 334 CB TRP 36 -11.367 43.962 31.969 1.00 7.53 C ATOM 335 CG TRP 36 -10.132 44.844 31.629 1.00 7.53 C ATOM 336 CD2 TRP 36 -9.842 45.512 30.380 1.00 7.53 C ATOM 337 CE2 TRP 36 -8.586 46.165 30.536 1.00 7.53 C ATOM 338 CE3 TRP 36 -10.520 45.627 29.143 1.00 7.53 C ATOM 339 CD1 TRP 36 -9.065 45.116 32.455 1.00 7.53 C ATOM 340 NE1 TRP 36 -8.145 45.903 31.806 1.00 7.53 N ATOM 342 CZ2 TRP 36 -7.986 46.923 29.502 1.00 7.53 C ATOM 343 CZ3 TRP 36 -9.922 46.386 28.106 1.00 7.53 C ATOM 344 CH2 TRP 36 -8.664 47.023 28.301 1.00 7.53 C ATOM 345 C TRP 36 -13.397 45.368 31.343 1.00 7.53 C ATOM 346 O TRP 36 -13.308 46.591 31.175 1.00 7.53 O ATOM 347 N ILE 37 -14.158 44.568 30.579 1.00 7.48 N ATOM 349 CA ILE 37 -14.976 45.043 29.439 1.00 7.48 C ATOM 350 CB ILE 37 -15.439 43.867 28.488 1.00 7.48 C ATOM 351 CG2 ILE 37 -14.261 43.442 27.599 1.00 7.48 C ATOM 352 CG1 ILE 37 -16.020 42.672 29.278 1.00 7.48 C ATOM 353 CD1 ILE 37 -17.191 41.948 28.599 1.00 7.48 C ATOM 354 C ILE 37 -16.172 45.919 29.882 1.00 7.48 C ATOM 355 O ILE 37 -16.486 46.925 29.229 1.00 7.48 O ATOM 356 N SER 38 -16.785 45.540 31.015 1.00 7.36 N ATOM 358 CA SER 38 -17.932 46.240 31.628 1.00 7.36 C ATOM 359 CB SER 38 -18.548 45.385 32.743 1.00 7.36 C ATOM 360 OG SER 38 -19.007 44.144 32.237 1.00 7.36 O ATOM 362 C SER 38 -17.522 47.618 32.181 1.00 7.36 C ATOM 363 O SER 38 -18.255 48.598 32.007 1.00 7.36 O ATOM 364 N SER 39 -16.356 47.666 32.844 1.00 7.00 N ATOM 366 CA SER 39 -15.770 48.888 33.430 1.00 7.00 C ATOM 367 CB SER 39 -14.631 48.528 34.394 1.00 7.00 C ATOM 368 OG SER 39 -13.629 47.751 33.755 1.00 7.00 O ATOM 370 C SER 39 -15.272 49.888 32.366 1.00 7.00 C ATOM 371 O SER 39 -15.437 51.102 32.530 1.00 7.00 O ATOM 372 N PHE 40 -14.668 49.353 31.293 1.00 7.07 N ATOM 374 CA PHE 40 -14.118 50.123 30.156 1.00 7.07 C ATOM 375 CB PHE 40 -13.210 49.209 29.286 1.00 7.07 C ATOM 376 CG PHE 40 -12.098 49.939 28.521 1.00 7.07 C ATOM 377 CD1 PHE 40 -12.318 50.420 27.207 1.00 7.07 C ATOM 378 CD2 PHE 40 -10.816 50.112 29.096 1.00 7.07 C ATOM 379 CE1 PHE 40 -11.281 51.064 26.478 1.00 7.07 C ATOM 380 CE2 PHE 40 -9.769 50.754 28.379 1.00 7.07 C ATOM 381 CZ PHE 40 -10.004 51.231 27.065 1.00 7.07 C ATOM 382 C PHE 40 -15.203 50.795 29.284 1.00 7.07 C ATOM 383 O PHE 40 -15.026 51.942 28.861 1.00 7.07 O ATOM 384 N ILE 41 -16.304 50.070 29.027 1.00 8.93 N ATOM 386 CA ILE 41 -17.443 50.548 28.209 1.00 8.93 C ATOM 387 CB ILE 41 -18.365 49.313 27.733 1.00 8.93 C ATOM 388 CG2 ILE 41 -19.127 48.666 28.928 1.00 8.93 C ATOM 389 CG1 ILE 41 -19.185 49.628 26.444 1.00 8.93 C ATOM 390 CD1 ILE 41 -20.535 50.437 26.557 1.00 8.93 C ATOM 391 C ILE 41 -18.243 51.690 28.894 1.00 8.93 C ATOM 392 O ILE 41 -18.626 52.660 28.234 1.00 8.93 O ATOM 393 N GLY 42 -18.473 51.547 30.203 1.00 8.96 N ATOM 395 CA GLY 42 -19.211 52.542 30.969 1.00 8.96 C ATOM 396 C GLY 42 -19.503 52.094 32.392 1.00 8.96 C ATOM 397 O GLY 42 -18.570 51.823 33.158 1.00 8.96 O ATOM 398 N ARG 43 -20.796 52.020 32.729 1.00 8.43 N ATOM 400 CA ARG 43 -21.281 51.607 34.059 1.00 8.43 C ATOM 401 CB ARG 43 -22.335 52.604 34.603 1.00 8.43 C ATOM 402 CG ARG 43 -23.462 53.035 33.638 1.00 8.43 C ATOM 403 CD ARG 43 -24.417 54.011 34.305 1.00 8.43 C ATOM 404 NE ARG 43 -25.494 54.432 33.406 1.00 8.43 N ATOM 406 CZ ARG 43 -26.471 55.283 33.723 1.00 8.43 C ATOM 407 NH1 ARG 43 -26.540 55.833 34.932 1.00 8.43 N ATOM 410 NH2 ARG 43 -27.392 55.586 32.819 1.00 8.43 N ATOM 413 C ARG 43 -21.808 50.158 34.105 1.00 8.43 C ATOM 414 O ARG 43 -21.692 49.488 35.138 1.00 8.43 O ATOM 415 N SER 44 -22.362 49.691 32.970 1.00 7.97 N ATOM 417 CA SER 44 -22.944 48.337 32.752 1.00 7.97 C ATOM 418 CB SER 44 -21.851 47.252 32.642 1.00 7.97 C ATOM 419 OG SER 44 -21.059 47.181 33.816 1.00 7.97 O ATOM 421 C SER 44 -24.057 47.875 33.716 1.00 7.97 C ATOM 422 O SER 44 -24.023 48.199 34.909 1.00 7.97 O ATOM 423 N LYS 45 -25.026 47.112 33.180 1.00 8.45 N ATOM 425 CA LYS 45 -26.206 46.541 33.890 1.00 8.45 C ATOM 426 CG LYS 45 -25.251 44.170 34.261 1.00 8.45 C ATOM 427 CD LYS 45 -24.881 43.141 35.316 1.00 8.45 C ATOM 428 CE LYS 45 -24.329 41.875 34.683 1.00 8.45 C ATOM 429 NZ LYS 45 -23.962 40.857 35.706 1.00 8.45 N ATOM 433 C LYS 45 -27.156 47.550 34.569 1.00 8.45 C ATOM 434 O LYS 45 -26.699 48.542 35.152 1.00 8.45 O ATOM 435 CB LYS 45 -25.806 45.441 34.895 1.00 8.45 C TER END