####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS243_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS243_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 10 - 30 4.98 12.50 LONGEST_CONTINUOUS_SEGMENT: 21 25 - 45 4.80 11.70 LCS_AVERAGE: 46.75 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 33 - 42 1.93 11.10 LONGEST_CONTINUOUS_SEGMENT: 10 36 - 45 1.68 14.56 LCS_AVERAGE: 17.36 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 10 - 17 0.62 19.76 LCS_AVERAGE: 12.40 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 5 18 3 4 4 4 7 8 10 13 13 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT V 3 V 3 4 5 18 3 4 4 4 7 8 10 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT Q 4 Q 4 4 5 18 3 4 4 4 7 8 10 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT G 5 G 5 4 5 19 3 4 4 4 6 8 10 12 14 15 19 21 23 25 28 30 32 34 36 40 LCS_GDT P 6 P 6 4 5 19 3 3 4 4 5 7 8 12 14 15 19 21 23 25 28 30 32 34 36 40 LCS_GDT W 7 W 7 4 5 19 3 3 4 5 7 9 9 12 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT V 8 V 8 4 5 19 3 3 4 5 6 7 9 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT G 9 G 9 4 9 19 3 3 4 5 7 9 9 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT S 10 S 10 8 9 21 7 7 8 8 8 8 9 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT S 11 S 11 8 9 21 7 7 8 8 8 9 9 10 12 15 16 18 21 25 28 30 32 34 36 38 LCS_GDT Y 12 Y 12 8 9 21 7 7 8 8 8 9 9 10 13 14 15 17 21 25 27 30 32 34 36 40 LCS_GDT V 13 V 13 8 9 21 7 7 8 8 8 9 9 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT A 14 A 14 8 9 21 7 7 8 8 8 9 9 13 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT E 15 E 15 8 9 21 7 7 8 8 8 9 9 13 13 14 16 20 22 25 28 30 32 34 35 37 LCS_GDT T 16 T 16 8 9 21 7 7 8 8 8 9 9 11 13 16 17 20 23 25 27 30 32 34 36 40 LCS_GDT G 17 G 17 8 9 21 3 6 8 8 8 9 9 12 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT Q 18 Q 18 4 4 21 3 3 5 6 6 7 9 11 16 16 19 21 23 25 28 30 32 34 36 40 LCS_GDT N 19 N 19 4 4 21 3 3 4 6 6 6 8 12 14 15 19 21 23 25 27 30 32 34 36 40 LCS_GDT W 20 W 20 6 6 21 5 6 6 6 6 8 10 11 13 14 17 19 21 25 27 30 32 34 36 40 LCS_GDT A 21 A 21 6 6 21 5 6 6 6 6 7 10 11 13 15 16 18 20 24 27 30 32 34 36 40 LCS_GDT S 22 S 22 6 6 21 5 6 6 6 6 8 10 12 14 15 17 19 21 25 27 30 32 34 36 40 LCS_GDT L 23 L 23 6 6 21 5 6 6 6 6 8 10 12 14 15 17 19 21 25 27 30 32 34 36 40 LCS_GDT A 24 A 24 6 6 21 5 6 6 6 6 6 8 11 13 14 15 17 19 21 27 30 32 34 36 38 LCS_GDT A 25 A 25 6 6 21 5 6 6 6 6 6 8 11 13 14 15 18 19 22 27 30 32 34 36 38 LCS_GDT N 26 N 26 3 4 21 3 3 5 6 6 8 10 12 14 15 18 21 23 25 27 30 32 34 36 40 LCS_GDT E 27 E 27 4 7 21 3 3 5 6 6 8 11 13 16 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT L 28 L 28 5 7 21 3 3 5 6 7 8 12 13 16 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT R 29 R 29 5 7 21 4 7 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT V 30 V 30 5 7 21 3 5 10 10 10 13 16 17 17 18 19 20 23 25 27 30 32 34 36 40 LCS_GDT T 31 T 31 5 7 21 3 5 5 6 6 8 16 17 17 18 19 19 19 20 23 27 28 31 35 40 LCS_GDT E 32 E 32 5 7 21 3 7 10 10 10 13 16 17 17 18 19 19 20 21 24 27 28 32 33 40 LCS_GDT R 33 R 33 5 10 21 3 5 5 8 9 13 16 17 17 18 19 19 20 24 26 27 31 33 35 40 LCS_GDT P 34 P 34 3 10 21 3 3 4 8 9 13 16 17 17 18 19 19 20 24 26 27 31 33 35 40 LCS_GDT F 35 F 35 3 10 21 3 3 4 7 9 13 16 17 17 18 19 20 23 25 28 30 32 33 36 40 LCS_GDT W 36 W 36 7 10 21 5 7 10 10 10 13 16 17 17 18 19 20 23 25 28 30 32 33 36 40 LCS_GDT I 37 I 37 7 10 21 5 7 10 10 10 13 16 17 17 18 19 20 23 25 28 30 32 33 36 40 LCS_GDT S 38 S 38 7 10 21 5 7 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT S 39 S 39 7 10 21 5 7 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT F 40 F 40 7 10 21 5 7 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT I 41 I 41 7 10 21 4 7 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT G 42 G 42 7 10 21 4 6 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT R 43 R 43 4 10 21 3 4 6 8 9 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 LCS_GDT S 44 S 44 4 10 21 0 4 6 8 10 13 16 17 17 18 19 19 20 24 27 29 31 33 36 40 LCS_GDT K 45 K 45 0 10 21 0 0 4 4 10 13 16 17 17 18 19 19 23 25 28 29 32 34 36 40 LCS_AVERAGE LCS_A: 25.50 ( 12.40 17.36 46.75 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 7 10 10 10 13 16 17 17 18 19 21 23 25 28 30 32 34 36 40 GDT PERCENT_AT 15.91 15.91 22.73 22.73 22.73 29.55 36.36 38.64 38.64 40.91 43.18 47.73 52.27 56.82 63.64 68.18 72.73 77.27 81.82 90.91 GDT RMS_LOCAL 0.16 0.16 0.95 0.95 0.95 1.81 2.55 2.66 2.66 2.97 3.36 4.44 4.53 4.93 5.38 5.45 5.78 6.08 6.32 7.16 GDT RMS_ALL_AT 19.64 19.64 13.10 13.10 13.10 13.57 13.02 13.39 13.39 12.93 12.23 7.95 8.41 8.04 8.58 8.56 8.12 8.50 8.33 7.65 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.265 0 0.065 0.086 12.907 0.000 0.000 - LGA V 3 V 3 13.033 0 0.054 0.052 14.315 0.000 0.000 14.315 LGA Q 4 Q 4 14.933 0 0.154 0.864 16.015 0.000 0.000 15.438 LGA G 5 G 5 18.300 0 0.517 0.517 21.412 0.000 0.000 - LGA P 6 P 6 17.684 0 0.274 0.274 18.836 0.000 0.000 17.969 LGA W 7 W 7 18.238 0 0.520 1.163 24.349 0.000 0.000 23.955 LGA V 8 V 8 15.515 0 0.696 0.677 15.837 0.000 0.000 13.987 LGA G 9 G 9 15.610 0 0.544 0.544 17.666 0.000 0.000 - LGA S 10 S 10 21.737 0 0.671 0.744 24.601 0.000 0.000 24.601 LGA S 11 S 11 23.495 0 0.039 0.672 24.781 0.000 0.000 24.628 LGA Y 12 Y 12 21.747 0 0.076 1.060 23.197 0.000 0.000 22.606 LGA V 13 V 13 18.763 0 0.028 0.055 19.901 0.000 0.000 17.181 LGA A 14 A 14 19.928 0 0.042 0.041 21.047 0.000 0.000 - LGA E 15 E 15 20.926 0 0.051 1.202 25.328 0.000 0.000 24.517 LGA T 16 T 16 18.002 0 0.187 1.155 19.107 0.000 0.000 18.618 LGA G 17 G 17 14.997 0 0.223 0.223 16.261 0.000 0.000 - LGA Q 18 Q 18 14.805 0 0.618 0.909 17.781 0.000 0.000 15.086 LGA N 19 N 19 20.217 0 0.066 0.975 24.517 0.000 0.000 23.073 LGA W 20 W 20 17.330 0 0.585 1.270 19.873 0.000 0.000 19.873 LGA A 21 A 21 16.687 0 0.052 0.049 16.912 0.000 0.000 - LGA S 22 S 22 16.859 0 0.029 0.633 17.036 0.000 0.000 16.513 LGA L 23 L 23 16.635 0 0.071 0.120 16.788 0.000 0.000 16.530 LGA A 24 A 24 16.565 0 0.051 0.048 16.638 0.000 0.000 - LGA A 25 A 25 16.612 0 0.367 0.362 18.795 0.000 0.000 - LGA N 26 N 26 10.349 0 0.635 0.618 12.946 0.000 0.000 12.946 LGA E 27 E 27 9.105 0 0.144 1.289 13.448 0.000 0.000 13.448 LGA L 28 L 28 6.578 0 0.595 0.943 12.167 0.455 0.227 12.167 LGA R 29 R 29 1.051 0 0.532 1.578 8.254 40.455 21.322 4.826 LGA V 30 V 30 2.968 0 0.070 1.048 7.425 46.364 26.494 6.095 LGA T 31 T 31 3.827 0 0.183 0.191 7.898 17.273 9.870 7.898 LGA E 32 E 32 3.032 0 0.609 1.334 9.597 41.364 18.586 8.141 LGA R 33 R 33 3.287 0 0.142 1.164 12.260 20.000 7.273 12.260 LGA P 34 P 34 3.466 0 0.672 0.623 5.532 13.182 9.351 5.532 LGA F 35 F 35 3.368 0 0.563 1.272 11.802 19.545 7.603 11.802 LGA W 36 W 36 2.120 0 0.244 0.980 4.380 52.273 39.481 1.385 LGA I 37 I 37 1.822 0 0.054 0.999 3.292 51.364 44.091 1.943 LGA S 38 S 38 1.706 0 0.047 0.079 2.025 50.909 46.667 2.025 LGA S 39 S 39 1.644 0 0.058 0.062 1.953 58.182 55.758 1.935 LGA F 40 F 40 0.779 0 0.056 1.187 7.871 81.818 42.314 7.871 LGA I 41 I 41 1.985 0 0.105 1.021 5.259 43.182 25.682 5.169 LGA G 42 G 42 3.209 0 0.202 0.202 3.677 23.636 23.636 - LGA R 43 R 43 2.653 0 0.631 1.519 12.354 52.727 19.339 11.788 LGA S 44 S 44 2.836 0 0.645 0.769 4.048 21.818 23.939 2.420 LGA K 45 K 45 3.012 0 0.146 0.986 6.806 15.000 7.071 6.503 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.598 7.541 8.670 14.762 9.743 7.013 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.66 36.364 31.023 0.616 LGA_LOCAL RMSD: 2.661 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.391 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.598 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.772687 * X + 0.513968 * Y + 0.372549 * Z + -12.018186 Y_new = 0.633252 * X + 0.664902 * Y + 0.396102 * Z + -29.278742 Z_new = -0.044125 * X + 0.541980 * Y + -0.839232 * Z + 73.836678 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.455047 0.044139 2.568172 [DEG: 140.6638 2.5290 147.1454 ] ZXZ: 2.386828 2.566666 -0.081235 [DEG: 136.7552 147.0591 -4.6544 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS243_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS243_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.66 31.023 7.60 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS243_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 1.113 35.055 19.455 1.00 16.22 ATOM 13 CA ALA 2 0.516 35.984 18.547 1.00 16.22 ATOM 14 C ALA 2 -0.645 35.283 17.932 1.00 16.22 ATOM 15 O ALA 2 -0.563 34.100 17.604 1.00 16.22 ATOM 17 CB ALA 2 1.534 36.447 17.516 1.00 16.22 ATOM 18 N VAL 3 -1.775 35.998 17.779 1.00 14.50 ATOM 19 CA VAL 3 -2.910 35.379 17.173 1.00 14.50 ATOM 20 C VAL 3 -3.071 36.010 15.833 1.00 14.50 ATOM 21 O VAL 3 -3.049 37.232 15.703 1.00 14.50 ATOM 23 CB VAL 3 -4.170 35.532 18.045 1.00 14.50 ATOM 24 CG1 VAL 3 -5.375 34.915 17.352 1.00 14.50 ATOM 25 CG2 VAL 3 -3.952 34.898 19.410 1.00 14.50 ATOM 26 N GLN 4 -3.212 35.172 14.790 1.00 13.78 ATOM 27 CA GLN 4 -3.412 35.653 13.459 1.00 13.78 ATOM 28 C GLN 4 -4.829 35.368 13.095 1.00 13.78 ATOM 29 O GLN 4 -5.239 34.228 12.913 1.00 13.78 ATOM 31 CB GLN 4 -2.425 34.993 12.495 1.00 13.78 ATOM 32 CD GLN 4 -0.586 36.720 12.624 1.00 13.78 ATOM 33 CG GLN 4 -0.965 35.264 12.818 1.00 13.78 ATOM 34 OE1 GLN 4 -0.825 37.296 11.562 1.00 13.78 ATOM 37 NE2 GLN 4 0.007 37.319 13.650 1.00 13.78 ATOM 38 N GLY 5 -5.556 36.443 12.808 1.00 14.04 ATOM 39 CA GLY 5 -6.958 36.525 12.529 1.00 14.04 ATOM 40 C GLY 5 -7.110 37.941 12.080 1.00 14.04 ATOM 41 O GLY 5 -8.056 38.652 12.417 1.00 14.04 ATOM 43 N PRO 6 -6.059 38.356 11.388 1.00 13.21 ATOM 44 CA PRO 6 -5.954 39.740 11.060 1.00 13.21 ATOM 45 C PRO 6 -7.173 40.298 10.404 1.00 13.21 ATOM 46 O PRO 6 -7.827 41.126 11.028 1.00 13.21 ATOM 47 CB PRO 6 -4.760 39.804 10.106 1.00 13.21 ATOM 48 CD PRO 6 -5.135 37.487 10.568 1.00 13.21 ATOM 49 CG PRO 6 -4.694 38.445 9.497 1.00 13.21 ATOM 50 N TRP 7 -7.384 40.032 9.095 1.00 12.99 ATOM 51 CA TRP 7 -8.598 40.384 8.416 1.00 12.99 ATOM 52 C TRP 7 -9.561 39.256 8.468 1.00 12.99 ATOM 53 O TRP 7 -10.624 39.319 9.081 1.00 12.99 ATOM 55 CB TRP 7 -8.307 40.776 6.965 1.00 12.99 ATOM 58 CG TRP 7 -9.527 41.180 6.197 1.00 12.99 ATOM 59 CD1 TRP 7 -10.273 40.391 5.369 1.00 12.99 ATOM 61 NE1 TRP 7 -11.317 41.112 4.841 1.00 12.99 ATOM 62 CD2 TRP 7 -10.145 42.473 6.185 1.00 12.99 ATOM 63 CE2 TRP 7 -11.259 42.394 5.329 1.00 12.99 ATOM 64 CH2 TRP 7 -11.795 44.661 5.715 1.00 12.99 ATOM 65 CZ2 TRP 7 -12.092 43.484 5.086 1.00 12.99 ATOM 66 CE3 TRP 7 -9.864 43.689 6.815 1.00 12.99 ATOM 67 CZ3 TRP 7 -10.693 44.767 6.572 1.00 12.99 ATOM 68 N VAL 8 -9.138 38.140 7.834 1.00 15.13 ATOM 69 CA VAL 8 -9.964 36.980 7.752 1.00 15.13 ATOM 70 C VAL 8 -9.899 36.426 9.118 1.00 15.13 ATOM 71 O VAL 8 -8.866 36.528 9.777 1.00 15.13 ATOM 73 CB VAL 8 -9.472 36.013 6.658 1.00 15.13 ATOM 74 CG1 VAL 8 -10.283 34.727 6.680 1.00 15.13 ATOM 75 CG2 VAL 8 -9.550 36.674 5.290 1.00 15.13 ATOM 76 N GLY 9 -10.999 35.812 9.569 1.00 14.47 ATOM 77 CA GLY 9 -11.064 35.391 10.927 1.00 14.47 ATOM 78 C GLY 9 -12.153 36.212 11.521 1.00 14.47 ATOM 79 O GLY 9 -12.579 37.210 10.941 1.00 14.47 ATOM 81 N SER 10 -12.650 35.801 12.698 1.00 12.57 ATOM 82 CA SER 10 -13.740 36.534 13.257 1.00 12.57 ATOM 83 C SER 10 -13.264 37.180 14.509 1.00 12.57 ATOM 84 O SER 10 -12.296 36.737 15.124 1.00 12.57 ATOM 86 CB SER 10 -14.932 35.610 13.512 1.00 12.57 ATOM 88 OG SER 10 -15.436 35.080 12.299 1.00 12.57 ATOM 89 N SER 11 -13.920 38.294 14.891 1.00 12.41 ATOM 90 CA SER 11 -13.531 38.977 16.084 1.00 12.41 ATOM 91 C SER 11 -13.813 38.076 17.233 1.00 12.41 ATOM 92 O SER 11 -13.001 37.956 18.148 1.00 12.41 ATOM 94 CB SER 11 -14.276 40.308 16.207 1.00 12.41 ATOM 96 OG SER 11 -13.890 41.204 15.179 1.00 12.41 ATOM 97 N TYR 12 -14.972 37.396 17.200 1.00 12.44 ATOM 98 CA TYR 12 -15.327 36.599 18.332 1.00 12.44 ATOM 99 C TYR 12 -14.328 35.500 18.482 1.00 12.44 ATOM 100 O TYR 12 -13.879 35.217 19.591 1.00 12.44 ATOM 102 CB TYR 12 -16.743 36.042 18.173 1.00 12.44 ATOM 103 CG TYR 12 -17.200 35.189 19.334 1.00 12.44 ATOM 105 OH TYR 12 -18.459 32.853 22.536 1.00 12.44 ATOM 106 CZ TYR 12 -18.041 33.624 21.476 1.00 12.44 ATOM 107 CD1 TYR 12 -17.635 35.771 20.518 1.00 12.44 ATOM 108 CE1 TYR 12 -18.054 34.998 21.583 1.00 12.44 ATOM 109 CD2 TYR 12 -17.194 33.803 19.243 1.00 12.44 ATOM 110 CE2 TYR 12 -17.610 33.014 20.299 1.00 12.44 ATOM 111 N VAL 13 -13.930 34.857 17.368 1.00 12.06 ATOM 112 CA VAL 13 -13.013 33.760 17.480 1.00 12.06 ATOM 113 C VAL 13 -11.715 34.266 18.032 1.00 12.06 ATOM 114 O VAL 13 -11.115 33.641 18.906 1.00 12.06 ATOM 116 CB VAL 13 -12.799 33.063 16.124 1.00 12.06 ATOM 117 CG1 VAL 13 -11.671 32.047 16.219 1.00 12.06 ATOM 118 CG2 VAL 13 -14.085 32.395 15.660 1.00 12.06 ATOM 119 N ALA 14 -11.242 35.425 17.543 1.00 11.43 ATOM 120 CA ALA 14 -9.981 35.928 17.998 1.00 11.43 ATOM 121 C ALA 14 -10.064 36.252 19.456 1.00 11.43 ATOM 122 O ALA 14 -9.179 35.885 20.227 1.00 11.43 ATOM 124 CB ALA 14 -9.576 37.153 17.193 1.00 11.43 ATOM 125 N GLU 15 -11.148 36.932 19.877 1.00 12.64 ATOM 126 CA GLU 15 -11.274 37.351 21.245 1.00 12.64 ATOM 127 C GLU 15 -11.399 36.146 22.116 1.00 12.64 ATOM 128 O GLU 15 -10.821 36.092 23.201 1.00 12.64 ATOM 130 CB GLU 15 -12.478 38.279 21.412 1.00 12.64 ATOM 131 CD GLU 15 -13.546 40.508 20.886 1.00 12.64 ATOM 132 CG GLU 15 -12.311 39.638 20.751 1.00 12.64 ATOM 133 OE1 GLU 15 -14.593 39.988 21.324 1.00 12.64 ATOM 134 OE2 GLU 15 -13.465 41.709 20.554 1.00 12.64 ATOM 135 N THR 16 -12.151 35.134 21.649 1.00 11.80 ATOM 136 CA THR 16 -12.364 33.962 22.445 1.00 11.80 ATOM 137 C THR 16 -11.037 33.334 22.710 1.00 11.80 ATOM 138 O THR 16 -10.722 32.993 23.849 1.00 11.80 ATOM 140 CB THR 16 -13.313 32.971 21.747 1.00 11.80 ATOM 142 OG1 THR 16 -14.597 33.583 21.565 1.00 11.80 ATOM 143 CG2 THR 16 -13.489 31.717 22.591 1.00 11.80 ATOM 144 N GLY 17 -10.211 33.204 21.658 1.00 12.84 ATOM 145 CA GLY 17 -8.931 32.573 21.791 1.00 12.84 ATOM 146 C GLY 17 -8.130 33.372 22.763 1.00 12.84 ATOM 147 O GLY 17 -7.373 32.828 23.566 1.00 12.84 ATOM 149 N GLN 18 -8.287 34.703 22.711 1.00 12.08 ATOM 150 CA GLN 18 -7.537 35.579 23.557 1.00 12.08 ATOM 151 C GLN 18 -7.866 35.285 24.987 1.00 12.08 ATOM 152 O GLN 18 -6.985 35.312 25.845 1.00 12.08 ATOM 154 CB GLN 18 -7.833 37.041 23.213 1.00 12.08 ATOM 155 CD GLN 18 -7.685 38.902 21.514 1.00 12.08 ATOM 156 CG GLN 18 -7.274 37.488 21.874 1.00 12.08 ATOM 157 OE1 GLN 18 -7.405 39.847 22.252 1.00 12.08 ATOM 160 NE2 GLN 18 -8.352 39.052 20.376 1.00 12.08 ATOM 161 N ASN 19 -9.143 34.989 25.286 1.00 13.02 ATOM 162 CA ASN 19 -9.506 34.735 26.651 1.00 13.02 ATOM 163 C ASN 19 -8.760 33.537 27.156 1.00 13.02 ATOM 164 O ASN 19 -8.278 33.540 28.288 1.00 13.02 ATOM 166 CB ASN 19 -11.019 34.545 26.776 1.00 13.02 ATOM 167 CG ASN 19 -11.783 35.846 26.630 1.00 13.02 ATOM 168 OD1 ASN 19 -11.221 36.929 26.790 1.00 13.02 ATOM 171 ND2 ASN 19 -13.072 35.743 26.325 1.00 13.02 ATOM 172 N TRP 20 -8.628 32.481 26.333 1.00 12.67 ATOM 173 CA TRP 20 -7.954 31.289 26.766 1.00 12.67 ATOM 174 C TRP 20 -6.541 31.652 27.068 1.00 12.67 ATOM 175 O TRP 20 -5.984 31.268 28.098 1.00 12.67 ATOM 177 CB TRP 20 -8.047 30.201 25.694 1.00 12.67 ATOM 180 CG TRP 20 -7.382 28.916 26.085 1.00 12.67 ATOM 181 CD1 TRP 20 -7.945 27.878 26.772 1.00 12.67 ATOM 183 NE1 TRP 20 -7.026 26.871 26.944 1.00 12.67 ATOM 184 CD2 TRP 20 -6.029 28.531 25.813 1.00 12.67 ATOM 185 CE2 TRP 20 -5.842 27.251 26.363 1.00 12.67 ATOM 186 CH2 TRP 20 -3.597 27.196 25.632 1.00 12.67 ATOM 187 CZ2 TRP 20 -4.627 26.572 26.278 1.00 12.67 ATOM 188 CE3 TRP 20 -4.959 29.146 25.157 1.00 12.67 ATOM 189 CZ3 TRP 20 -3.756 28.470 25.076 1.00 12.67 ATOM 190 N ALA 21 -5.938 32.440 26.163 1.00 12.37 ATOM 191 CA ALA 21 -4.557 32.797 26.265 1.00 12.37 ATOM 192 C ALA 21 -4.357 33.513 27.556 1.00 12.37 ATOM 193 O ALA 21 -3.347 33.307 28.222 1.00 12.37 ATOM 195 CB ALA 21 -4.143 33.653 25.077 1.00 12.37 ATOM 196 N SER 22 -5.321 34.365 27.951 1.00 10.81 ATOM 197 CA SER 22 -5.194 35.119 29.166 1.00 10.81 ATOM 198 C SER 22 -5.109 34.164 30.317 1.00 10.81 ATOM 199 O SER 22 -4.343 34.384 31.253 1.00 10.81 ATOM 201 CB SER 22 -6.372 36.081 29.324 1.00 10.81 ATOM 203 OG SER 22 -6.355 37.079 28.318 1.00 10.81 ATOM 204 N LEU 23 -5.886 33.064 30.269 1.00 12.65 ATOM 205 CA LEU 23 -5.847 32.113 31.341 1.00 12.65 ATOM 206 C LEU 23 -4.450 31.597 31.394 1.00 12.65 ATOM 207 O LEU 23 -3.881 31.405 32.467 1.00 12.65 ATOM 209 CB LEU 23 -6.875 31.003 31.110 1.00 12.65 ATOM 210 CG LEU 23 -8.346 31.407 31.226 1.00 12.65 ATOM 211 CD1 LEU 23 -9.253 30.264 30.798 1.00 12.65 ATOM 212 CD2 LEU 23 -8.674 31.838 32.647 1.00 12.65 ATOM 213 N ALA 24 -3.870 31.373 30.203 1.00 11.94 ATOM 214 CA ALA 24 -2.525 30.918 30.036 1.00 11.94 ATOM 215 C ALA 24 -1.638 31.982 30.602 1.00 11.94 ATOM 216 O ALA 24 -0.572 31.699 31.146 1.00 11.94 ATOM 218 CB ALA 24 -2.237 30.641 28.568 1.00 11.94 ATOM 219 N ALA 25 -2.100 33.246 30.509 1.00 12.65 ATOM 220 CA ALA 25 -1.369 34.407 30.933 1.00 12.65 ATOM 221 C ALA 25 -0.229 34.679 29.999 1.00 12.65 ATOM 222 O ALA 25 0.792 35.239 30.396 1.00 12.65 ATOM 224 CB ALA 25 -0.861 34.224 32.354 1.00 12.65 ATOM 225 N ASN 26 -0.384 34.294 28.714 1.00 11.77 ATOM 226 CA ASN 26 0.623 34.584 27.731 1.00 11.77 ATOM 227 C ASN 26 0.446 36.030 27.363 1.00 11.77 ATOM 228 O ASN 26 -0.606 36.615 27.612 1.00 11.77 ATOM 230 CB ASN 26 0.493 33.637 26.536 1.00 11.77 ATOM 231 CG ASN 26 0.860 32.207 26.885 1.00 11.77 ATOM 232 OD1 ASN 26 1.898 31.953 27.494 1.00 11.77 ATOM 235 ND2 ASN 26 0.005 31.268 26.498 1.00 11.77 ATOM 236 N GLU 27 1.494 36.660 26.795 1.00 13.29 ATOM 237 CA GLU 27 1.460 38.050 26.436 1.00 13.29 ATOM 238 C GLU 27 0.406 38.252 25.398 1.00 13.29 ATOM 239 O GLU 27 -0.456 39.117 25.541 1.00 13.29 ATOM 241 CB GLU 27 2.832 38.507 25.933 1.00 13.29 ATOM 242 CD GLU 27 4.278 40.401 25.099 1.00 13.29 ATOM 243 CG GLU 27 2.897 39.980 25.562 1.00 13.29 ATOM 244 OE1 GLU 27 5.177 39.537 25.046 1.00 13.29 ATOM 245 OE2 GLU 27 4.460 41.598 24.789 1.00 13.29 ATOM 246 N LEU 28 0.435 37.414 24.342 1.00 13.90 ATOM 247 CA LEU 28 -0.516 37.458 23.270 1.00 13.90 ATOM 248 C LEU 28 -0.443 38.753 22.529 1.00 13.90 ATOM 249 O LEU 28 -0.338 39.830 23.111 1.00 13.90 ATOM 251 CB LEU 28 -1.934 37.242 23.803 1.00 13.90 ATOM 252 CG LEU 28 -3.032 37.058 22.752 1.00 13.90 ATOM 253 CD1 LEU 28 -4.260 36.406 23.367 1.00 13.90 ATOM 254 CD2 LEU 28 -3.401 38.392 22.120 1.00 13.90 ATOM 255 N ARG 29 -0.474 38.649 21.188 1.00 15.91 ATOM 256 CA ARG 29 -0.486 39.775 20.306 1.00 15.91 ATOM 257 C ARG 29 -1.724 39.596 19.495 1.00 15.91 ATOM 258 O ARG 29 -1.979 38.502 18.992 1.00 15.91 ATOM 260 CB ARG 29 0.795 39.815 19.471 1.00 15.91 ATOM 261 CD ARG 29 2.205 41.018 17.778 1.00 15.91 ATOM 263 NE ARG 29 2.282 42.121 16.823 1.00 15.91 ATOM 264 CG ARG 29 0.875 40.994 18.514 1.00 15.91 ATOM 265 CZ ARG 29 3.342 42.378 16.063 1.00 15.91 ATOM 268 NH1 ARG 29 3.322 43.403 15.223 1.00 15.91 ATOM 271 NH2 ARG 29 4.419 41.609 16.145 1.00 15.91 ATOM 272 N VAL 30 -2.533 40.660 19.340 1.00 14.89 ATOM 273 CA VAL 30 -3.731 40.480 18.581 1.00 14.89 ATOM 274 C VAL 30 -3.602 41.236 17.303 1.00 14.89 ATOM 275 O VAL 30 -3.254 42.415 17.267 1.00 14.89 ATOM 277 CB VAL 30 -4.973 40.934 19.372 1.00 14.89 ATOM 278 CG1 VAL 30 -4.847 42.397 19.766 1.00 14.89 ATOM 279 CG2 VAL 30 -6.236 40.704 18.557 1.00 14.89 ATOM 280 N THR 31 -3.827 40.501 16.207 1.00 16.51 ATOM 281 CA THR 31 -3.820 40.891 14.831 1.00 16.51 ATOM 282 C THR 31 -5.166 41.404 14.422 1.00 16.51 ATOM 283 O THR 31 -5.468 41.430 13.233 1.00 16.51 ATOM 285 CB THR 31 -3.410 39.722 13.916 1.00 16.51 ATOM 287 OG1 THR 31 -4.332 38.638 14.079 1.00 16.51 ATOM 288 CG2 THR 31 -2.014 39.232 14.271 1.00 16.51 ATOM 289 N GLU 32 -6.079 41.662 15.372 1.00 14.14 ATOM 290 CA GLU 32 -7.411 42.050 14.998 1.00 14.14 ATOM 291 C GLU 32 -7.364 43.223 14.063 1.00 14.14 ATOM 292 O GLU 32 -8.096 43.260 13.074 1.00 14.14 ATOM 294 CB GLU 32 -8.240 42.383 16.240 1.00 14.14 ATOM 295 CD GLU 32 -10.491 43.013 17.197 1.00 14.14 ATOM 296 CG GLU 32 -9.685 42.748 15.941 1.00 14.14 ATOM 297 OE1 GLU 32 -9.901 43.477 18.195 1.00 14.14 ATOM 298 OE2 GLU 32 -11.714 42.755 17.184 1.00 14.14 ATOM 299 N ARG 33 -6.460 44.184 14.317 1.00 14.05 ATOM 300 CA ARG 33 -6.405 45.388 13.544 1.00 14.05 ATOM 301 C ARG 33 -6.291 45.080 12.089 1.00 14.05 ATOM 302 O ARG 33 -5.982 43.972 11.652 1.00 14.05 ATOM 304 CB ARG 33 -5.230 46.261 13.993 1.00 14.05 ATOM 305 CD ARG 33 -4.196 47.709 15.763 1.00 14.05 ATOM 307 NE ARG 33 -4.339 48.290 17.096 1.00 14.05 ATOM 308 CG ARG 33 -5.396 46.857 15.382 1.00 14.05 ATOM 309 CZ ARG 33 -3.456 49.115 17.649 1.00 14.05 ATOM 312 NH1 ARG 33 -3.670 49.594 18.867 1.00 14.05 ATOM 315 NH2 ARG 33 -2.361 49.458 16.984 1.00 14.05 ATOM 316 N PRO 34 -6.614 46.108 11.356 1.00 13.44 ATOM 317 CA PRO 34 -6.659 46.106 9.922 1.00 13.44 ATOM 318 C PRO 34 -5.302 45.964 9.335 1.00 13.44 ATOM 319 O PRO 34 -5.202 45.945 8.108 1.00 13.44 ATOM 320 CB PRO 34 -7.280 47.459 9.569 1.00 13.44 ATOM 321 CD PRO 34 -6.908 47.501 11.933 1.00 13.44 ATOM 322 CG PRO 34 -6.888 48.355 10.696 1.00 13.44 ATOM 323 N PHE 35 -4.251 45.873 10.174 1.00 12.83 ATOM 324 CA PHE 35 -2.923 45.755 9.642 1.00 12.83 ATOM 325 C PHE 35 -2.925 44.574 8.733 1.00 12.83 ATOM 326 O PHE 35 -2.459 44.694 7.601 1.00 12.83 ATOM 328 CB PHE 35 -1.902 45.617 10.773 1.00 12.83 ATOM 329 CG PHE 35 -1.636 46.898 11.511 1.00 12.83 ATOM 330 CZ PHE 35 -1.140 49.273 12.868 1.00 12.83 ATOM 331 CD1 PHE 35 -2.091 47.077 12.805 1.00 12.83 ATOM 332 CE1 PHE 35 -1.846 48.257 13.482 1.00 12.83 ATOM 333 CD2 PHE 35 -0.930 47.925 10.908 1.00 12.83 ATOM 334 CE2 PHE 35 -0.686 49.104 11.586 1.00 12.83 ATOM 335 N TRP 36 -3.443 43.420 9.225 1.00 14.06 ATOM 336 CA TRP 36 -3.619 42.203 8.476 1.00 14.06 ATOM 337 C TRP 36 -2.509 41.284 8.815 1.00 14.06 ATOM 338 O TRP 36 -1.831 41.427 9.828 1.00 14.06 ATOM 340 CB TRP 36 -3.666 42.499 6.976 1.00 14.06 ATOM 343 CG TRP 36 -4.875 43.278 6.556 1.00 14.06 ATOM 344 CD1 TRP 36 -6.047 43.406 7.244 1.00 14.06 ATOM 346 NE1 TRP 36 -6.925 44.198 6.543 1.00 14.06 ATOM 347 CD2 TRP 36 -5.031 44.038 5.350 1.00 14.06 ATOM 348 CE2 TRP 36 -6.321 44.598 5.377 1.00 14.06 ATOM 349 CH2 TRP 36 -5.978 45.641 3.286 1.00 14.06 ATOM 350 CZ2 TRP 36 -6.806 45.403 4.347 1.00 14.06 ATOM 351 CE3 TRP 36 -4.205 44.298 4.253 1.00 14.06 ATOM 352 CZ3 TRP 36 -4.689 45.097 3.235 1.00 14.06 ATOM 353 N ILE 37 -2.345 40.269 7.951 1.00 13.93 ATOM 354 CA ILE 37 -1.279 39.334 8.092 1.00 13.93 ATOM 355 C ILE 37 -0.028 40.125 8.006 1.00 13.93 ATOM 356 O ILE 37 0.994 39.740 8.565 1.00 13.93 ATOM 358 CB ILE 37 -1.353 38.227 7.024 1.00 13.93 ATOM 359 CD1 ILE 37 -2.884 36.404 6.112 1.00 13.93 ATOM 360 CG1 ILE 37 -2.576 37.338 7.261 1.00 13.93 ATOM 361 CG2 ILE 37 -0.063 37.422 6.999 1.00 13.93 ATOM 362 N SER 38 -0.059 41.247 7.273 1.00 12.32 ATOM 363 CA SER 38 1.119 42.052 7.161 1.00 12.32 ATOM 364 C SER 38 1.525 42.475 8.543 1.00 12.32 ATOM 365 O SER 38 2.689 42.791 8.783 1.00 12.32 ATOM 367 CB SER 38 0.860 43.256 6.252 1.00 12.32 ATOM 369 OG SER 38 -0.061 44.155 6.846 1.00 12.32 ATOM 370 N SER 39 0.578 42.474 9.504 1.00 12.09 ATOM 371 CA SER 39 0.878 42.874 10.858 1.00 12.09 ATOM 372 C SER 39 1.784 41.847 11.469 1.00 12.09 ATOM 373 O SER 39 2.278 42.011 12.584 1.00 12.09 ATOM 375 CB SER 39 -0.411 43.035 11.666 1.00 12.09 ATOM 377 OG SER 39 -1.066 41.790 11.837 1.00 12.09 ATOM 378 N PHE 40 2.037 40.765 10.718 1.00 13.61 ATOM 379 CA PHE 40 2.830 39.649 11.128 1.00 13.61 ATOM 380 C PHE 40 4.199 40.172 11.406 1.00 13.61 ATOM 381 O PHE 40 4.941 39.543 12.162 1.00 13.61 ATOM 383 CB PHE 40 2.830 38.565 10.048 1.00 13.61 ATOM 384 CG PHE 40 3.661 38.907 8.845 1.00 13.61 ATOM 385 CZ PHE 40 5.194 39.543 6.616 1.00 13.61 ATOM 386 CD1 PHE 40 5.004 38.577 8.798 1.00 13.61 ATOM 387 CE1 PHE 40 5.769 38.893 7.691 1.00 13.61 ATOM 388 CD2 PHE 40 3.100 39.558 7.762 1.00 13.61 ATOM 389 CE2 PHE 40 3.865 39.873 6.654 1.00 13.61 ATOM 390 N ILE 41 4.578 41.291 10.738 1.00 14.09 ATOM 391 CA ILE 41 5.826 41.953 11.014 1.00 14.09 ATOM 392 C ILE 41 5.914 42.040 12.494 1.00 14.09 ATOM 393 O ILE 41 4.928 42.341 13.165 1.00 14.09 ATOM 395 CB ILE 41 5.897 43.330 10.329 1.00 14.09 ATOM 396 CD1 ILE 41 7.545 45.104 9.531 1.00 14.09 ATOM 397 CG1 ILE 41 7.318 43.894 10.410 1.00 14.09 ATOM 398 CG2 ILE 41 4.875 44.280 10.934 1.00 14.09 ATOM 399 N GLY 42 7.108 41.775 13.044 1.00 14.33 ATOM 400 CA GLY 42 7.143 41.516 14.447 1.00 14.33 ATOM 401 C GLY 42 7.004 40.032 14.464 1.00 14.33 ATOM 402 O GLY 42 6.525 39.414 15.415 1.00 14.33 ATOM 404 N ARG 43 7.453 39.456 13.335 1.00 14.73 ATOM 405 CA ARG 43 7.439 38.076 12.967 1.00 14.73 ATOM 406 C ARG 43 8.313 37.338 13.917 1.00 14.73 ATOM 407 O ARG 43 8.134 36.140 14.125 1.00 14.73 ATOM 409 CB ARG 43 7.903 37.903 11.519 1.00 14.73 ATOM 410 CD ARG 43 9.698 38.268 9.804 1.00 14.73 ATOM 412 NE ARG 43 11.109 38.563 9.565 1.00 14.73 ATOM 413 CG ARG 43 9.359 38.270 11.286 1.00 14.73 ATOM 414 CZ ARG 43 11.623 39.788 9.540 1.00 14.73 ATOM 417 NH1 ARG 43 12.919 39.960 9.315 1.00 14.73 ATOM 420 NH2 ARG 43 10.839 40.839 9.739 1.00 14.73 ATOM 421 N SER 44 9.288 38.046 14.516 1.00 13.16 ATOM 422 CA SER 44 10.209 37.410 15.409 1.00 13.16 ATOM 423 C SER 44 9.423 36.708 16.474 1.00 13.16 ATOM 424 O SER 44 9.873 35.695 17.008 1.00 13.16 ATOM 426 CB SER 44 11.174 38.437 16.006 1.00 13.16 ATOM 428 OG SER 44 10.488 39.355 16.839 1.00 13.16 ATOM 429 N LYS 45 8.215 37.204 16.807 1.00 13.78 ATOM 430 CA LYS 45 7.451 36.476 17.779 1.00 13.78 ATOM 431 C LYS 45 7.191 35.127 17.187 1.00 13.78 ATOM 432 O LYS 45 6.473 34.988 16.198 1.00 13.78 ATOM 434 CB LYS 45 6.163 37.227 18.121 1.00 13.78 ATOM 435 CD LYS 45 5.921 36.611 20.542 1.00 13.78 ATOM 436 CE LYS 45 5.023 35.974 21.589 1.00 13.78 ATOM 437 CG LYS 45 5.295 36.533 19.158 1.00 13.78 ATOM 441 NZ LYS 45 4.925 34.498 21.415 1.00 13.78 TER END