####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS243_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS243_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 23 2 - 24 4.97 10.18 LONGEST_CONTINUOUS_SEGMENT: 23 3 - 25 4.88 9.20 LCS_AVERAGE: 49.12 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.88 11.89 LCS_AVERAGE: 17.98 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.88 11.89 LCS_AVERAGE: 13.43 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 23 3 3 6 7 9 10 10 11 14 16 19 20 22 25 27 27 29 31 34 34 LCS_GDT V 3 V 3 4 8 23 3 3 6 7 9 10 12 13 18 19 22 25 29 30 31 33 34 34 36 39 LCS_GDT Q 4 Q 4 4 8 23 3 4 6 7 9 13 15 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT G 5 G 5 4 8 23 3 5 7 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT P 6 P 6 4 8 23 3 4 6 7 9 10 14 17 18 23 24 28 29 30 31 33 34 34 36 39 LCS_GDT W 7 W 7 4 8 23 3 4 6 7 9 10 12 17 19 23 25 28 29 30 31 33 34 34 36 39 LCS_GDT V 8 V 8 4 8 23 3 6 8 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT G 9 G 9 6 9 23 6 6 7 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT S 10 S 10 6 9 23 6 6 8 9 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT S 11 S 11 6 9 23 6 6 7 9 9 11 13 16 19 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT Y 12 Y 12 6 9 23 6 6 7 9 9 10 13 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT V 13 V 13 6 9 23 6 6 7 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT A 14 A 14 6 9 23 6 6 8 9 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT E 15 E 15 5 9 23 4 6 8 9 12 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT T 16 T 16 5 9 23 4 5 7 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT G 17 G 17 5 9 23 4 5 5 9 9 9 10 13 18 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT Q 18 Q 18 4 5 23 3 4 6 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT N 19 N 19 4 5 23 3 4 4 4 7 11 13 17 19 23 25 28 29 30 31 33 34 34 36 39 LCS_GDT W 20 W 20 10 10 23 3 7 7 10 11 11 15 17 19 23 25 28 29 30 31 33 34 34 35 37 LCS_GDT A 21 A 21 10 10 23 6 9 9 10 11 15 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT S 22 S 22 10 10 23 6 9 9 10 11 11 12 12 19 23 26 27 29 30 31 33 34 34 36 39 LCS_GDT L 23 L 23 10 10 23 6 9 9 10 11 11 13 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT A 24 A 24 10 10 23 6 9 9 10 11 11 12 13 15 18 26 27 29 30 31 33 34 34 36 39 LCS_GDT A 25 A 25 10 10 23 6 9 9 10 11 11 12 13 15 17 24 27 28 29 31 33 34 34 36 39 LCS_GDT N 26 N 26 10 10 22 6 9 9 10 11 11 12 13 14 16 17 20 22 25 28 30 33 33 36 39 LCS_GDT E 27 E 27 10 10 22 5 9 9 10 11 11 12 12 13 16 17 18 21 25 26 26 30 33 35 39 LCS_GDT L 28 L 28 10 10 22 5 9 9 10 11 11 12 12 14 16 17 19 22 25 26 26 29 30 34 39 LCS_GDT R 29 R 29 10 10 22 5 9 9 10 11 11 12 13 14 16 17 19 21 22 24 26 28 29 31 33 LCS_GDT V 30 V 30 5 6 22 4 5 5 5 7 8 11 13 14 16 17 20 22 25 26 26 29 33 34 39 LCS_GDT T 31 T 31 5 6 22 4 5 5 5 7 10 11 13 14 16 17 20 22 25 26 26 29 33 34 39 LCS_GDT E 32 E 32 5 6 22 4 5 5 5 7 10 11 13 14 16 19 20 22 25 26 30 33 33 36 39 LCS_GDT R 33 R 33 5 6 22 4 5 5 5 7 10 11 13 14 16 17 18 21 24 26 30 33 33 36 39 LCS_GDT P 34 P 34 5 6 22 3 5 5 5 5 8 9 13 16 19 24 27 28 30 31 33 34 34 36 39 LCS_GDT F 35 F 35 3 7 22 3 4 5 6 7 11 13 16 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT W 36 W 36 5 7 22 4 6 8 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 37 LCS_GDT I 37 I 37 5 7 22 4 6 8 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT S 38 S 38 5 7 22 4 6 8 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT S 39 S 39 5 7 22 4 5 8 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT F 40 F 40 5 7 16 4 4 5 7 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT I 41 I 41 5 7 15 4 4 5 6 9 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT G 42 G 42 4 7 15 3 4 4 7 7 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT R 43 R 43 4 5 15 3 4 5 6 7 11 14 17 19 23 26 28 29 30 31 33 34 34 36 39 LCS_GDT S 44 S 44 4 5 15 3 4 4 5 5 6 6 8 11 16 19 20 22 26 31 32 34 34 36 39 LCS_GDT K 45 K 45 3 5 15 3 4 4 4 5 6 6 10 11 13 14 14 15 15 15 15 19 30 30 32 LCS_AVERAGE LCS_A: 26.84 ( 13.43 17.98 49.12 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 9 10 13 16 17 17 20 23 26 28 29 30 31 33 34 34 36 39 GDT PERCENT_AT 13.64 20.45 20.45 22.73 29.55 36.36 38.64 38.64 45.45 52.27 59.09 63.64 65.91 68.18 70.45 75.00 77.27 77.27 81.82 88.64 GDT RMS_LOCAL 0.19 0.56 0.56 0.88 1.91 2.14 2.23 2.23 2.94 3.33 3.81 3.98 4.08 4.25 4.41 4.83 5.10 5.10 6.01 7.00 GDT RMS_ALL_AT 12.04 12.08 12.08 11.89 10.43 10.38 10.43 10.43 10.01 9.71 9.42 10.19 10.06 9.88 9.87 9.40 9.26 9.26 8.38 8.03 # Checking swapping # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 13.560 0 0.051 0.051 14.822 0.000 0.000 - LGA V 3 V 3 8.919 0 0.173 0.216 10.751 0.000 0.000 6.573 LGA Q 4 Q 4 5.203 0 0.627 0.548 8.536 4.091 1.818 8.536 LGA G 5 G 5 2.512 0 0.016 0.016 3.536 20.909 20.909 - LGA P 6 P 6 4.834 0 0.036 0.368 7.554 2.273 1.299 7.554 LGA W 7 W 7 5.155 0 0.328 1.052 10.522 7.727 2.987 6.238 LGA V 8 V 8 0.517 0 0.638 0.628 4.491 66.364 45.195 4.491 LGA G 9 G 9 1.918 0 0.543 0.543 1.918 62.273 62.273 - LGA S 10 S 10 2.602 0 0.046 0.143 5.759 35.909 24.242 5.759 LGA S 11 S 11 5.246 0 0.043 0.062 8.513 3.636 2.424 8.513 LGA Y 12 Y 12 5.023 0 0.049 1.130 13.974 5.455 1.818 13.974 LGA V 13 V 13 2.505 0 0.113 0.146 4.906 38.636 25.714 4.906 LGA A 14 A 14 2.316 0 0.024 0.023 3.430 44.091 38.909 - LGA E 15 E 15 2.463 0 0.153 0.912 4.559 48.182 25.253 4.208 LGA T 16 T 16 1.997 0 0.189 1.169 5.955 40.455 28.571 5.955 LGA G 17 G 17 6.495 0 0.178 0.178 7.044 0.455 0.455 - LGA Q 18 Q 18 2.246 0 0.613 1.445 6.760 30.455 17.778 6.355 LGA N 19 N 19 6.112 0 0.167 0.994 10.847 1.364 0.682 7.639 LGA W 20 W 20 6.328 0 0.606 0.500 14.879 4.091 1.169 14.368 LGA A 21 A 21 3.247 0 0.015 0.025 4.953 13.182 10.909 - LGA S 22 S 22 5.822 0 0.025 0.051 8.211 1.364 1.212 4.938 LGA L 23 L 23 6.927 0 0.068 0.128 10.695 0.455 0.227 6.684 LGA A 24 A 24 8.539 0 0.032 0.031 11.515 0.000 0.000 - LGA A 25 A 25 10.376 0 0.082 0.084 14.940 0.000 0.000 - LGA N 26 N 26 15.420 0 0.036 0.070 19.585 0.000 0.000 14.420 LGA E 27 E 27 18.498 0 0.064 0.125 22.407 0.000 0.000 20.069 LGA L 28 L 28 18.293 0 0.180 1.412 21.542 0.000 0.000 14.652 LGA R 29 R 29 22.967 0 0.326 1.005 25.603 0.000 0.000 25.457 LGA V 30 V 30 22.295 0 0.610 0.546 23.495 0.000 0.000 20.467 LGA T 31 T 31 24.363 0 0.196 0.314 28.703 0.000 0.000 28.053 LGA E 32 E 32 19.873 0 0.032 1.285 21.973 0.000 0.000 21.431 LGA R 33 R 33 16.907 0 0.046 1.247 22.601 0.000 0.000 22.601 LGA P 34 P 34 10.985 0 0.088 0.409 14.354 0.000 0.000 12.106 LGA F 35 F 35 7.398 0 0.623 1.241 14.270 0.000 0.000 14.270 LGA W 36 W 36 1.593 0 0.597 1.004 7.570 42.727 17.273 7.395 LGA I 37 I 37 1.606 0 0.081 0.362 2.807 54.545 51.591 2.807 LGA S 38 S 38 1.617 0 0.148 0.669 3.955 54.545 46.667 3.955 LGA S 39 S 39 0.624 0 0.122 0.151 1.543 90.909 80.000 1.543 LGA F 40 F 40 2.030 0 0.146 0.164 4.355 42.273 25.785 4.355 LGA I 41 I 41 3.094 0 0.610 0.956 7.533 28.182 15.909 7.533 LGA G 42 G 42 2.940 0 0.112 0.112 4.467 17.727 17.727 - LGA R 43 R 43 7.057 0 0.619 1.332 14.962 0.455 0.165 14.522 LGA S 44 S 44 13.082 0 0.028 0.687 14.617 0.000 0.000 13.637 LGA K 45 K 45 17.858 0 0.034 0.768 23.087 0.000 0.000 23.087 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.948 7.884 9.684 17.335 12.931 3.117 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.23 39.205 35.425 0.729 LGA_LOCAL RMSD: 2.233 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.432 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.948 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.165472 * X + -0.583919 * Y + 0.794769 * Z + 12.678312 Y_new = 0.825765 * X + -0.358566 * Y + -0.435365 * Z + 30.237326 Z_new = 0.539195 * X + 0.728333 * Y + 0.422847 * Z + -9.333292 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.373029 -0.569481 1.044788 [DEG: 78.6688 -32.6289 59.8619 ] ZXZ: 1.069653 1.134212 0.637273 [DEG: 61.2866 64.9855 36.5131 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS243_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS243_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.23 35.425 7.95 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS243_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 13.090 31.896 -0.621 1.00 12.91 ATOM 13 CA ALA 2 12.584 31.950 0.715 1.00 12.91 ATOM 14 C ALA 2 11.673 33.129 0.787 1.00 12.91 ATOM 15 O ALA 2 11.740 34.033 -0.043 1.00 12.91 ATOM 17 CB ALA 2 13.729 32.042 1.713 1.00 12.91 ATOM 18 N VAL 3 10.772 33.123 1.786 1.00 12.44 ATOM 19 CA VAL 3 9.818 34.179 1.953 1.00 12.44 ATOM 20 C VAL 3 10.488 35.303 2.689 1.00 12.44 ATOM 21 O VAL 3 10.529 35.320 3.917 1.00 12.44 ATOM 23 CB VAL 3 8.561 33.691 2.697 1.00 12.44 ATOM 24 CG1 VAL 3 7.573 34.834 2.878 1.00 12.44 ATOM 25 CG2 VAL 3 7.913 32.537 1.948 1.00 12.44 ATOM 26 N GLN 4 11.123 36.223 1.933 1.00 11.88 ATOM 27 CA GLN 4 11.775 37.399 2.446 1.00 11.88 ATOM 28 C GLN 4 10.849 38.556 2.673 1.00 11.88 ATOM 29 O GLN 4 10.947 39.259 3.678 1.00 11.88 ATOM 31 CB GLN 4 12.893 37.847 1.502 1.00 11.88 ATOM 32 CD GLN 4 15.134 37.339 0.456 1.00 11.88 ATOM 33 CG GLN 4 14.077 36.896 1.446 1.00 11.88 ATOM 34 OE1 GLN 4 14.838 38.044 -0.510 1.00 11.88 ATOM 37 NE2 GLN 4 16.374 36.926 0.691 1.00 11.88 ATOM 38 N GLY 5 9.905 38.772 1.736 1.00 9.86 ATOM 39 CA GLY 5 9.104 39.964 1.739 1.00 9.86 ATOM 40 C GLY 5 8.184 39.951 2.915 1.00 9.86 ATOM 41 O GLY 5 7.975 38.939 3.579 1.00 9.86 ATOM 43 N PRO 6 7.591 41.096 3.121 1.00 8.15 ATOM 44 CA PRO 6 6.729 41.348 4.245 1.00 8.15 ATOM 45 C PRO 6 5.650 40.313 4.295 1.00 8.15 ATOM 46 O PRO 6 4.993 40.182 5.325 1.00 8.15 ATOM 47 CB PRO 6 6.173 42.749 3.977 1.00 8.15 ATOM 48 CD PRO 6 7.751 42.332 2.226 1.00 8.15 ATOM 49 CG PRO 6 7.209 43.406 3.128 1.00 8.15 ATOM 50 N TRP 7 5.397 39.607 3.182 1.00 9.25 ATOM 51 CA TRP 7 4.412 38.568 3.190 1.00 9.25 ATOM 52 C TRP 7 5.123 37.281 3.451 1.00 9.25 ATOM 53 O TRP 7 6.047 36.928 2.722 1.00 9.25 ATOM 55 CB TRP 7 3.647 38.544 1.866 1.00 9.25 ATOM 58 CG TRP 7 2.573 37.501 1.813 1.00 9.25 ATOM 59 CD1 TRP 7 1.250 37.671 2.106 1.00 9.25 ATOM 61 NE1 TRP 7 0.573 36.487 1.942 1.00 9.25 ATOM 62 CD2 TRP 7 2.730 36.125 1.442 1.00 9.25 ATOM 63 CE2 TRP 7 1.462 35.523 1.535 1.00 9.25 ATOM 64 CH2 TRP 7 2.334 33.438 0.854 1.00 9.25 ATOM 65 CZ2 TRP 7 1.252 34.176 1.242 1.00 9.25 ATOM 66 CE3 TRP 7 3.819 35.345 1.043 1.00 9.25 ATOM 67 CZ3 TRP 7 3.606 34.011 0.754 1.00 9.25 ATOM 68 N VAL 8 4.706 36.541 4.502 1.00 10.41 ATOM 69 CA VAL 8 5.368 35.307 4.825 1.00 10.41 ATOM 70 C VAL 8 4.472 34.150 4.514 1.00 10.41 ATOM 71 O VAL 8 3.325 34.082 4.953 1.00 10.41 ATOM 73 CB VAL 8 5.800 35.268 6.303 1.00 10.41 ATOM 74 CG1 VAL 8 6.448 33.933 6.634 1.00 10.41 ATOM 75 CG2 VAL 8 6.751 36.415 6.610 1.00 10.41 ATOM 76 N GLY 9 5.013 33.185 3.741 1.00 10.31 ATOM 77 CA GLY 9 4.276 32.017 3.361 1.00 10.31 ATOM 78 C GLY 9 4.133 31.169 4.581 1.00 10.31 ATOM 79 O GLY 9 4.949 31.233 5.498 1.00 10.31 ATOM 81 N SER 10 3.113 30.293 4.578 1.00 10.47 ATOM 82 CA SER 10 2.791 29.508 5.733 1.00 10.47 ATOM 83 C SER 10 3.984 28.707 6.140 1.00 10.47 ATOM 84 O SER 10 4.174 28.449 7.327 1.00 10.47 ATOM 86 CB SER 10 1.595 28.598 5.446 1.00 10.47 ATOM 88 OG SER 10 1.920 27.618 4.476 1.00 10.47 ATOM 89 N SER 11 4.836 28.313 5.176 1.00 10.66 ATOM 90 CA SER 11 5.965 27.495 5.513 1.00 10.66 ATOM 91 C SER 11 6.792 28.214 6.532 1.00 10.66 ATOM 92 O SER 11 7.168 27.639 7.553 1.00 10.66 ATOM 94 CB SER 11 6.783 27.169 4.261 1.00 10.66 ATOM 96 OG SER 11 7.915 26.381 4.583 1.00 10.66 ATOM 97 N TYR 12 7.111 29.495 6.267 1.00 10.16 ATOM 98 CA TYR 12 7.867 30.307 7.179 1.00 10.16 ATOM 99 C TYR 12 7.006 30.585 8.374 1.00 10.16 ATOM 100 O TYR 12 7.471 30.637 9.511 1.00 10.16 ATOM 102 CB TYR 12 8.322 31.598 6.496 1.00 10.16 ATOM 103 CG TYR 12 9.163 32.494 7.378 1.00 10.16 ATOM 105 OH TYR 12 11.490 34.947 9.799 1.00 10.16 ATOM 106 CZ TYR 12 10.718 34.136 8.998 1.00 10.16 ATOM 107 CD1 TYR 12 10.502 32.206 7.613 1.00 10.16 ATOM 108 CE1 TYR 12 11.278 33.019 8.417 1.00 10.16 ATOM 109 CD2 TYR 12 8.617 33.624 7.972 1.00 10.16 ATOM 110 CE2 TYR 12 9.378 34.448 8.779 1.00 10.16 ATOM 111 N VAL 13 5.702 30.755 8.109 1.00 9.95 ATOM 112 CA VAL 13 4.663 31.103 9.032 1.00 9.95 ATOM 113 C VAL 13 4.510 30.054 10.085 1.00 9.95 ATOM 114 O VAL 13 4.042 30.348 11.184 1.00 9.95 ATOM 116 CB VAL 13 3.319 31.321 8.313 1.00 9.95 ATOM 117 CG1 VAL 13 2.196 31.497 9.323 1.00 9.95 ATOM 118 CG2 VAL 13 3.399 32.525 7.386 1.00 9.95 ATOM 119 N ALA 14 4.954 28.817 9.800 1.00 9.67 ATOM 120 CA ALA 14 4.640 27.688 10.625 1.00 9.67 ATOM 121 C ALA 14 4.974 27.941 12.062 1.00 9.67 ATOM 122 O ALA 14 4.182 27.581 12.932 1.00 9.67 ATOM 124 CB ALA 14 5.379 26.451 10.135 1.00 9.67 ATOM 125 N GLU 15 6.132 28.538 12.396 1.00 9.93 ATOM 126 CA GLU 15 6.300 28.654 13.814 1.00 9.93 ATOM 127 C GLU 15 5.354 29.645 14.449 1.00 9.93 ATOM 128 O GLU 15 4.476 29.252 15.216 1.00 9.93 ATOM 130 CB GLU 15 7.737 29.056 14.152 1.00 9.93 ATOM 131 CD GLU 15 9.471 29.484 15.939 1.00 9.93 ATOM 132 CG GLU 15 8.022 29.146 15.643 1.00 9.93 ATOM 133 OE1 GLU 15 10.247 29.667 14.978 1.00 9.93 ATOM 134 OE2 GLU 15 9.828 29.567 17.133 1.00 9.93 ATOM 135 N THR 16 5.521 30.958 14.158 1.00 10.03 ATOM 136 CA THR 16 4.727 31.991 14.781 1.00 10.03 ATOM 137 C THR 16 3.394 32.240 14.142 1.00 10.03 ATOM 138 O THR 16 2.350 32.214 14.790 1.00 10.03 ATOM 140 CB THR 16 5.476 33.337 14.809 1.00 10.03 ATOM 142 OG1 THR 16 6.681 33.200 15.572 1.00 10.03 ATOM 143 CG2 THR 16 4.613 34.412 15.452 1.00 10.03 ATOM 144 N GLY 17 3.424 32.436 12.814 1.00 9.22 ATOM 145 CA GLY 17 2.343 32.941 12.018 1.00 9.22 ATOM 146 C GLY 17 1.154 32.051 11.990 1.00 9.22 ATOM 147 O GLY 17 0.046 32.550 11.866 1.00 9.22 ATOM 149 N GLN 18 1.331 30.727 12.116 1.00 9.58 ATOM 150 CA GLN 18 0.281 29.788 11.831 1.00 9.58 ATOM 151 C GLN 18 -0.978 30.160 12.547 1.00 9.58 ATOM 152 O GLN 18 -2.060 30.086 11.969 1.00 9.58 ATOM 154 CB GLN 18 0.709 28.372 12.220 1.00 9.58 ATOM 155 CD GLN 18 -0.483 27.146 10.360 1.00 9.58 ATOM 156 CG GLN 18 -0.302 27.295 11.858 1.00 9.58 ATOM 157 OE1 GLN 18 0.485 26.947 9.625 1.00 9.58 ATOM 160 NE2 GLN 18 -1.726 27.240 9.903 1.00 9.58 ATOM 161 N ASN 19 -0.898 30.581 13.818 1.00 10.04 ATOM 162 CA ASN 19 -2.136 30.965 14.419 1.00 10.04 ATOM 163 C ASN 19 -2.678 32.241 13.823 1.00 10.04 ATOM 164 O ASN 19 -3.738 32.234 13.201 1.00 10.04 ATOM 166 CB ASN 19 -1.972 31.118 15.933 1.00 10.04 ATOM 167 CG ASN 19 -1.831 29.783 16.640 1.00 10.04 ATOM 168 OD1 ASN 19 -2.197 28.740 16.099 1.00 10.04 ATOM 171 ND2 ASN 19 -1.297 29.814 17.856 1.00 10.04 ATOM 172 N TRP 20 -1.965 33.380 13.998 1.00 9.77 ATOM 173 CA TRP 20 -2.560 34.626 13.583 1.00 9.77 ATOM 174 C TRP 20 -2.464 34.930 12.116 1.00 9.77 ATOM 175 O TRP 20 -3.430 35.345 11.482 1.00 9.77 ATOM 177 CB TRP 20 -1.933 35.797 14.342 1.00 9.77 ATOM 180 CG TRP 20 -2.345 35.868 15.781 1.00 9.77 ATOM 181 CD1 TRP 20 -1.556 35.638 16.871 1.00 9.77 ATOM 183 NE1 TRP 20 -2.285 35.797 18.026 1.00 9.77 ATOM 184 CD2 TRP 20 -3.646 36.191 16.286 1.00 9.77 ATOM 185 CE2 TRP 20 -3.572 36.137 17.691 1.00 9.77 ATOM 186 CH2 TRP 20 -5.852 36.719 17.896 1.00 9.77 ATOM 187 CZ2 TRP 20 -4.671 36.401 18.507 1.00 9.77 ATOM 188 CE3 TRP 20 -4.867 36.520 15.688 1.00 9.77 ATOM 189 CZ3 TRP 20 -5.953 36.780 16.502 1.00 9.77 ATOM 190 N ALA 21 -1.271 34.721 11.548 1.00 8.83 ATOM 191 CA ALA 21 -0.855 34.992 10.201 1.00 8.83 ATOM 192 C ALA 21 -1.669 34.215 9.216 1.00 8.83 ATOM 193 O ALA 21 -1.947 34.707 8.123 1.00 8.83 ATOM 195 CB ALA 21 0.622 34.672 10.027 1.00 8.83 ATOM 196 N SER 22 -2.082 32.984 9.573 1.00 8.79 ATOM 197 CA SER 22 -2.726 32.124 8.619 1.00 8.79 ATOM 198 C SER 22 -3.897 32.801 7.972 1.00 8.79 ATOM 199 O SER 22 -4.070 32.686 6.760 1.00 8.79 ATOM 201 CB SER 22 -3.181 30.826 9.291 1.00 8.79 ATOM 203 OG SER 22 -4.182 31.079 10.261 1.00 8.79 ATOM 204 N LEU 23 -4.711 33.550 8.736 1.00 9.18 ATOM 205 CA LEU 23 -5.869 34.180 8.162 1.00 9.18 ATOM 206 C LEU 23 -5.412 35.174 7.133 1.00 9.18 ATOM 207 O LEU 23 -5.970 35.247 6.039 1.00 9.18 ATOM 209 CB LEU 23 -6.710 34.848 9.252 1.00 9.18 ATOM 210 CG LEU 23 -7.427 33.910 10.225 1.00 9.18 ATOM 211 CD1 LEU 23 -8.071 34.699 11.355 1.00 9.18 ATOM 212 CD2 LEU 23 -8.472 33.078 9.498 1.00 9.18 ATOM 213 N ALA 24 -4.368 35.961 7.455 1.00 9.38 ATOM 214 CA ALA 24 -3.888 36.982 6.563 1.00 9.38 ATOM 215 C ALA 24 -3.397 36.330 5.308 1.00 9.38 ATOM 216 O ALA 24 -3.610 36.843 4.214 1.00 9.38 ATOM 218 CB ALA 24 -2.792 37.797 7.231 1.00 9.38 ATOM 219 N ALA 25 -2.734 35.172 5.449 1.00 8.62 ATOM 220 CA ALA 25 -2.138 34.428 4.374 1.00 8.62 ATOM 221 C ALA 25 -3.191 33.980 3.415 1.00 8.62 ATOM 222 O ALA 25 -2.923 33.842 2.224 1.00 8.62 ATOM 224 CB ALA 25 -1.365 33.238 4.918 1.00 8.62 ATOM 225 N ASN 26 -4.414 33.718 3.905 1.00 8.61 ATOM 226 CA ASN 26 -5.455 33.218 3.054 1.00 8.61 ATOM 227 C ASN 26 -5.631 34.172 1.911 1.00 8.61 ATOM 228 O ASN 26 -5.928 33.755 0.793 1.00 8.61 ATOM 230 CB ASN 26 -6.749 33.025 3.848 1.00 8.61 ATOM 231 CG ASN 26 -6.693 31.823 4.771 1.00 8.61 ATOM 232 OD1 ASN 26 -5.871 30.925 4.587 1.00 8.61 ATOM 235 ND2 ASN 26 -7.569 31.804 5.768 1.00 8.61 ATOM 236 N GLU 27 -5.445 35.480 2.161 1.00 9.13 ATOM 237 CA GLU 27 -5.581 36.487 1.144 1.00 9.13 ATOM 238 C GLU 27 -4.565 36.215 0.075 1.00 9.13 ATOM 239 O GLU 27 -4.812 36.442 -1.108 1.00 9.13 ATOM 241 CB GLU 27 -5.406 37.883 1.745 1.00 9.13 ATOM 242 CD GLU 27 -7.864 38.431 1.937 1.00 9.13 ATOM 243 CG GLU 27 -6.540 38.310 2.665 1.00 9.13 ATOM 244 OE1 GLU 27 -7.906 39.105 0.886 1.00 9.13 ATOM 245 OE2 GLU 27 -8.861 37.854 2.419 1.00 9.13 ATOM 246 N LEU 28 -3.395 35.700 0.485 1.00 8.96 ATOM 247 CA LEU 28 -2.276 35.367 -0.352 1.00 8.96 ATOM 248 C LEU 28 -2.689 34.312 -1.334 1.00 8.96 ATOM 249 O LEU 28 -2.144 34.240 -2.433 1.00 8.96 ATOM 251 CB LEU 28 -1.093 34.897 0.497 1.00 8.96 ATOM 252 CG LEU 28 0.190 34.552 -0.262 1.00 8.96 ATOM 253 CD1 LEU 28 0.708 35.763 -1.022 1.00 8.96 ATOM 254 CD2 LEU 28 1.254 34.031 0.692 1.00 8.96 ATOM 255 N ARG 29 -3.664 33.460 -0.970 1.00 8.87 ATOM 256 CA ARG 29 -4.065 32.379 -1.829 1.00 8.87 ATOM 257 C ARG 29 -4.513 32.965 -3.138 1.00 8.87 ATOM 258 O ARG 29 -4.332 32.364 -4.196 1.00 8.87 ATOM 260 CB ARG 29 -5.172 31.553 -1.171 1.00 8.87 ATOM 261 CD ARG 29 -5.862 29.965 0.646 1.00 8.87 ATOM 263 NE ARG 29 -6.841 30.845 1.280 1.00 8.87 ATOM 264 CG ARG 29 -4.710 30.744 0.031 1.00 8.87 ATOM 265 CZ ARG 29 -8.015 30.439 1.752 1.00 8.87 ATOM 268 NH1 ARG 29 -8.841 31.312 2.313 1.00 8.87 ATOM 271 NH2 ARG 29 -8.360 29.163 1.662 1.00 8.87 ATOM 272 N VAL 30 -5.115 34.166 -3.076 1.00 10.50 ATOM 273 CA VAL 30 -5.633 34.940 -4.174 1.00 10.50 ATOM 274 C VAL 30 -4.499 35.397 -5.047 1.00 10.50 ATOM 275 O VAL 30 -4.729 35.784 -6.190 1.00 10.50 ATOM 277 CB VAL 30 -6.455 36.144 -3.678 1.00 10.50 ATOM 278 CG1 VAL 30 -6.834 37.046 -4.842 1.00 10.50 ATOM 279 CG2 VAL 30 -7.697 35.673 -2.937 1.00 10.50 ATOM 280 N THR 31 -3.256 35.335 -4.522 1.00 10.76 ATOM 281 CA THR 31 -2.003 35.808 -5.065 1.00 10.76 ATOM 282 C THR 31 -1.861 37.275 -4.802 1.00 10.76 ATOM 283 O THR 31 -1.124 37.983 -5.489 1.00 10.76 ATOM 285 CB THR 31 -1.902 35.528 -6.576 1.00 10.76 ATOM 287 OG1 THR 31 -2.716 36.464 -7.294 1.00 10.76 ATOM 288 CG2 THR 31 -2.385 34.121 -6.891 1.00 10.76 ATOM 289 N GLU 32 -2.556 37.761 -3.750 1.00 9.71 ATOM 290 CA GLU 32 -2.406 39.127 -3.338 1.00 9.71 ATOM 291 C GLU 32 -1.765 39.116 -1.981 1.00 9.71 ATOM 292 O GLU 32 -2.074 38.271 -1.140 1.00 9.71 ATOM 294 CB GLU 32 -3.762 39.834 -3.329 1.00 9.71 ATOM 295 CD GLU 32 -5.740 40.681 -4.654 1.00 9.71 ATOM 296 CG GLU 32 -4.409 39.955 -4.699 1.00 9.71 ATOM 297 OE1 GLU 32 -6.207 40.996 -3.539 1.00 9.71 ATOM 298 OE2 GLU 32 -6.315 40.934 -5.733 1.00 9.71 ATOM 299 N ARG 33 -0.838 40.063 -1.732 1.00 9.36 ATOM 300 CA ARG 33 -0.142 40.093 -0.476 1.00 9.36 ATOM 301 C ARG 33 -0.836 41.060 0.429 1.00 9.36 ATOM 302 O ARG 33 -0.960 42.247 0.139 1.00 9.36 ATOM 304 CB ARG 33 1.325 40.477 -0.685 1.00 9.36 ATOM 305 CD ARG 33 3.518 39.979 -1.798 1.00 9.36 ATOM 307 NE ARG 33 3.492 41.134 -2.692 1.00 9.36 ATOM 308 CG ARG 33 2.121 39.464 -1.491 1.00 9.36 ATOM 309 CZ ARG 33 4.536 41.924 -2.923 1.00 9.36 ATOM 312 NH1 ARG 33 4.418 42.952 -3.753 1.00 9.36 ATOM 315 NH2 ARG 33 5.694 41.685 -2.325 1.00 9.36 ATOM 316 N PRO 34 -1.310 40.540 1.524 1.00 8.57 ATOM 317 CA PRO 34 -1.970 41.355 2.506 1.00 8.57 ATOM 318 C PRO 34 -0.981 42.099 3.343 1.00 8.57 ATOM 319 O PRO 34 0.088 41.568 3.639 1.00 8.57 ATOM 320 CB PRO 34 -2.770 40.353 3.342 1.00 8.57 ATOM 321 CD PRO 34 -1.383 39.061 1.881 1.00 8.57 ATOM 322 CG PRO 34 -1.987 39.086 3.257 1.00 8.57 ATOM 323 N PHE 35 -1.338 43.332 3.736 1.00 9.34 ATOM 324 CA PHE 35 -0.536 44.184 4.565 1.00 9.34 ATOM 325 C PHE 35 -0.505 43.632 5.954 1.00 9.34 ATOM 326 O PHE 35 0.485 43.767 6.668 1.00 9.34 ATOM 328 CB PHE 35 -1.082 45.613 4.552 1.00 9.34 ATOM 329 CG PHE 35 -0.836 46.345 3.264 1.00 9.34 ATOM 330 CZ PHE 35 -0.375 47.698 0.881 1.00 9.34 ATOM 331 CD1 PHE 35 -1.889 46.682 2.431 1.00 9.34 ATOM 332 CE1 PHE 35 -1.663 47.355 1.245 1.00 9.34 ATOM 333 CD2 PHE 35 0.447 46.695 2.885 1.00 9.34 ATOM 334 CE2 PHE 35 0.673 47.368 1.699 1.00 9.34 ATOM 335 N TRP 36 -1.621 43.008 6.368 1.00 8.85 ATOM 336 CA TRP 36 -1.837 42.533 7.705 1.00 8.85 ATOM 337 C TRP 36 -0.794 41.535 8.099 1.00 8.85 ATOM 338 O TRP 36 -0.219 41.626 9.183 1.00 8.85 ATOM 340 CB TRP 36 -3.231 41.914 7.835 1.00 8.85 ATOM 343 CG TRP 36 -4.335 42.926 7.872 1.00 8.85 ATOM 344 CD1 TRP 36 -4.205 44.284 7.816 1.00 8.85 ATOM 346 NE1 TRP 36 -5.440 44.882 7.876 1.00 8.85 ATOM 347 CD2 TRP 36 -5.740 42.660 7.973 1.00 8.85 ATOM 348 CE2 TRP 36 -6.399 43.903 7.972 1.00 8.85 ATOM 349 CH2 TRP 36 -8.508 42.855 8.147 1.00 8.85 ATOM 350 CZ2 TRP 36 -7.785 44.013 8.059 1.00 8.85 ATOM 351 CE3 TRP 36 -6.503 41.492 8.063 1.00 8.85 ATOM 352 CZ3 TRP 36 -7.878 41.607 8.149 1.00 8.85 ATOM 353 N ILE 37 -0.516 40.561 7.217 1.00 9.51 ATOM 354 CA ILE 37 0.425 39.510 7.489 1.00 9.51 ATOM 355 C ILE 37 1.782 40.105 7.690 1.00 9.51 ATOM 356 O ILE 37 2.538 39.666 8.555 1.00 9.51 ATOM 358 CB ILE 37 0.446 38.465 6.358 1.00 9.51 ATOM 359 CD1 ILE 37 1.024 36.030 5.871 1.00 9.51 ATOM 360 CG1 ILE 37 1.188 37.206 6.809 1.00 9.51 ATOM 361 CG2 ILE 37 1.051 39.058 5.095 1.00 9.51 ATOM 362 N SER 38 2.130 41.108 6.866 1.00 9.53 ATOM 363 CA SER 38 3.418 41.727 6.931 1.00 9.53 ATOM 364 C SER 38 3.599 42.388 8.260 1.00 9.53 ATOM 365 O SER 38 4.629 42.213 8.908 1.00 9.53 ATOM 367 CB SER 38 3.583 42.739 5.796 1.00 9.53 ATOM 369 OG SER 38 3.593 42.094 4.533 1.00 9.53 ATOM 370 N SER 39 2.594 43.177 8.692 1.00 8.49 ATOM 371 CA SER 39 2.657 43.900 9.933 1.00 8.49 ATOM 372 C SER 39 2.597 42.935 11.078 1.00 8.49 ATOM 373 O SER 39 3.181 43.165 12.136 1.00 8.49 ATOM 375 CB SER 39 1.520 44.919 10.017 1.00 8.49 ATOM 377 OG SER 39 0.259 44.274 10.076 1.00 8.49 ATOM 378 N PHE 40 1.871 41.825 10.878 1.00 8.81 ATOM 379 CA PHE 40 1.677 40.772 11.837 1.00 8.81 ATOM 380 C PHE 40 3.012 40.229 12.240 1.00 8.81 ATOM 381 O PHE 40 3.367 40.189 13.417 1.00 8.81 ATOM 383 CB PHE 40 0.785 39.674 11.255 1.00 8.81 ATOM 384 CG PHE 40 -0.664 40.057 11.162 1.00 8.81 ATOM 385 CZ PHE 40 -3.349 40.758 10.988 1.00 8.81 ATOM 386 CD1 PHE 40 -1.059 41.373 11.325 1.00 8.81 ATOM 387 CE1 PHE 40 -2.393 41.725 11.239 1.00 8.81 ATOM 388 CD2 PHE 40 -1.632 39.101 10.911 1.00 8.81 ATOM 389 CE2 PHE 40 -2.966 39.452 10.827 1.00 8.81 ATOM 390 N ILE 41 3.781 39.809 11.229 1.00 9.05 ATOM 391 CA ILE 41 5.075 39.206 11.328 1.00 9.05 ATOM 392 C ILE 41 6.065 40.224 11.786 1.00 9.05 ATOM 393 O ILE 41 7.045 39.896 12.450 1.00 9.05 ATOM 395 CB ILE 41 5.512 38.585 9.988 1.00 9.05 ATOM 396 CD1 ILE 41 4.488 36.332 10.598 1.00 9.05 ATOM 397 CG1 ILE 41 4.560 37.455 9.588 1.00 9.05 ATOM 398 CG2 ILE 41 6.954 38.108 10.067 1.00 9.05 ATOM 399 N GLY 42 5.860 41.494 11.394 1.00 9.85 ATOM 400 CA GLY 42 6.808 42.511 11.740 1.00 9.85 ATOM 401 C GLY 42 7.777 42.610 10.606 1.00 9.85 ATOM 402 O GLY 42 8.836 43.224 10.722 1.00 9.85 ATOM 404 N ARG 43 7.431 41.966 9.477 1.00 8.82 ATOM 405 CA ARG 43 8.237 41.965 8.291 1.00 8.82 ATOM 406 C ARG 43 8.281 43.330 7.687 1.00 8.82 ATOM 407 O ARG 43 9.298 43.710 7.110 1.00 8.82 ATOM 409 CB ARG 43 7.701 40.951 7.278 1.00 8.82 ATOM 410 CD ARG 43 9.352 39.144 7.831 1.00 8.82 ATOM 412 NE ARG 43 10.045 39.188 6.545 1.00 8.82 ATOM 413 CG ARG 43 7.881 39.500 7.698 1.00 8.82 ATOM 414 CZ ARG 43 11.361 39.319 6.410 1.00 8.82 ATOM 417 NH1 ARG 43 11.903 39.350 5.200 1.00 8.82 ATOM 420 NH2 ARG 43 12.131 39.420 7.485 1.00 8.82 ATOM 421 N SER 44 7.173 44.093 7.763 1.00 9.46 ATOM 422 CA SER 44 7.168 45.409 7.190 1.00 9.46 ATOM 423 C SER 44 7.757 46.352 8.191 1.00 9.46 ATOM 424 O SER 44 7.663 46.130 9.397 1.00 9.46 ATOM 426 CB SER 44 5.747 45.817 6.797 1.00 9.46 ATOM 428 OG SER 44 4.922 45.959 7.939 1.00 9.46 ATOM 429 N LYS 45 8.396 47.438 7.707 1.00 9.04 ATOM 430 CA LYS 45 8.991 48.384 8.607 1.00 9.04 ATOM 431 C LYS 45 8.417 49.734 8.304 1.00 9.04 ATOM 432 O LYS 45 8.194 50.078 7.144 1.00 9.04 ATOM 434 CB LYS 45 10.515 48.371 8.469 1.00 9.04 ATOM 435 CD LYS 45 12.679 47.139 8.782 1.00 9.04 ATOM 436 CE LYS 45 13.327 45.816 9.152 1.00 9.04 ATOM 437 CG LYS 45 11.165 47.061 8.882 1.00 9.04 ATOM 441 NZ LYS 45 14.811 45.876 9.052 1.00 9.04 TER END