####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS241_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 8 - 42 4.94 7.23 LONGEST_CONTINUOUS_SEGMENT: 35 9 - 43 4.98 7.30 LCS_AVERAGE: 74.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 20 - 37 1.95 8.47 LCS_AVERAGE: 28.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.95 8.96 LONGEST_CONTINUOUS_SEGMENT: 12 21 - 32 0.95 9.02 LCS_AVERAGE: 17.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 12 0 3 3 3 4 6 9 13 17 21 25 27 29 31 33 34 37 37 39 40 LCS_GDT V 3 V 3 5 5 12 3 5 5 5 6 6 11 15 17 19 21 25 27 29 32 34 35 36 39 40 LCS_GDT Q 4 Q 4 5 5 15 3 5 5 5 6 7 11 15 17 19 21 25 27 29 30 34 35 36 39 40 LCS_GDT G 5 G 5 5 5 33 3 5 5 5 6 7 11 15 19 21 25 28 29 31 33 35 37 37 39 40 LCS_GDT P 6 P 6 5 5 33 3 5 5 5 6 7 11 15 17 21 25 28 29 31 33 35 37 37 39 40 LCS_GDT W 7 W 7 5 5 34 3 5 5 5 6 6 8 10 17 19 23 25 27 30 32 34 37 37 39 40 LCS_GDT V 8 V 8 3 10 35 3 3 14 16 17 18 19 22 25 26 26 28 29 31 33 35 37 37 39 40 LCS_GDT G 9 G 9 6 10 35 3 5 6 9 17 18 19 21 24 26 26 28 29 31 33 35 37 37 39 40 LCS_GDT S 10 S 10 8 10 35 3 5 8 9 15 17 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 11 S 11 8 10 35 3 5 8 9 10 12 14 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT Y 12 Y 12 8 10 35 3 6 8 9 10 12 14 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT V 13 V 13 8 10 35 3 6 8 9 10 15 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 14 A 14 8 10 35 4 6 8 9 10 12 14 17 21 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 15 E 15 8 10 35 4 6 8 9 10 12 14 14 15 16 22 26 30 32 33 34 36 37 39 40 LCS_GDT T 16 T 16 8 10 35 4 6 8 9 10 12 14 14 15 20 25 27 30 32 33 35 37 37 39 40 LCS_GDT G 17 G 17 8 10 35 4 6 8 9 10 12 14 14 15 16 18 23 27 30 33 35 37 37 39 40 LCS_GDT Q 18 Q 18 4 10 35 3 3 4 8 10 12 14 14 21 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT N 19 N 19 4 16 35 3 3 4 4 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT W 20 W 20 12 18 35 7 10 13 16 17 18 19 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 21 A 21 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 22 S 22 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT L 23 L 23 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 24 A 24 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT A 25 A 25 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT N 26 N 26 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 27 E 27 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT L 28 L 28 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT R 29 R 29 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT V 30 V 30 12 18 35 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT T 31 T 31 12 18 35 3 8 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT E 32 E 32 12 18 35 3 8 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT R 33 R 33 11 18 35 3 8 12 15 16 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT P 34 P 34 5 18 35 2 4 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT F 35 F 35 3 18 35 3 3 3 5 8 13 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT W 36 W 36 7 18 35 3 10 13 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT I 37 I 37 7 18 35 4 6 9 11 13 16 18 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 38 S 38 7 9 35 4 6 7 8 8 9 14 18 22 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT S 39 S 39 7 9 35 4 6 7 8 8 11 14 18 23 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT F 40 F 40 7 9 35 4 6 7 8 10 16 20 22 25 26 26 28 30 32 33 35 37 37 39 40 LCS_GDT I 41 I 41 7 9 35 4 6 7 8 8 11 14 18 23 24 26 28 30 32 33 35 37 37 39 40 LCS_GDT G 42 G 42 7 9 35 0 6 7 8 8 9 12 17 20 24 25 27 30 32 33 34 35 37 38 39 LCS_GDT R 43 R 43 7 9 35 0 6 7 8 8 11 11 13 20 22 25 27 30 32 33 34 35 36 38 39 LCS_GDT S 44 S 44 3 9 33 1 3 3 5 6 9 10 10 11 13 20 22 26 29 29 31 33 33 35 35 LCS_GDT K 45 K 45 3 3 14 0 3 3 4 4 5 5 8 8 11 13 16 16 17 20 21 22 25 26 28 LCS_AVERAGE LCS_A: 40.24 ( 17.87 28.15 74.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 10 14 16 17 18 20 22 25 26 26 28 30 32 33 35 37 37 39 40 GDT PERCENT_AT 15.91 22.73 31.82 36.36 38.64 40.91 45.45 50.00 56.82 59.09 59.09 63.64 68.18 72.73 75.00 79.55 84.09 84.09 88.64 90.91 GDT RMS_LOCAL 0.24 0.59 1.03 1.20 1.34 1.48 2.47 2.53 2.86 2.93 2.93 3.51 4.14 4.45 4.62 4.88 5.18 5.18 5.51 5.72 GDT RMS_ALL_AT 9.13 8.77 8.82 8.72 8.68 8.73 7.47 7.81 7.61 7.69 7.69 7.45 7.21 7.35 7.42 7.18 7.25 7.25 7.32 7.25 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.877 0 0.035 0.051 10.393 0.000 0.000 - LGA V 3 V 3 10.951 0 0.586 0.636 12.565 0.000 0.000 12.565 LGA Q 4 Q 4 11.826 0 0.039 0.928 18.690 0.000 0.000 18.537 LGA G 5 G 5 8.921 0 0.139 0.139 10.709 0.000 0.000 - LGA P 6 P 6 8.122 0 0.690 0.610 9.931 0.000 0.000 9.304 LGA W 7 W 7 9.226 0 0.519 1.207 20.052 0.000 0.000 19.689 LGA V 8 V 8 3.044 0 0.601 1.443 5.123 21.364 12.987 5.080 LGA G 9 G 9 4.250 0 0.439 0.439 4.250 17.273 17.273 - LGA S 10 S 10 3.188 0 0.039 0.140 4.348 17.273 17.879 2.758 LGA S 11 S 11 4.260 0 0.117 0.598 5.940 8.636 6.970 4.179 LGA Y 12 Y 12 4.799 0 0.054 1.272 11.706 2.273 1.212 11.706 LGA V 13 V 13 5.330 0 0.162 1.218 9.574 1.364 0.779 6.445 LGA A 14 A 14 10.288 0 0.087 0.092 13.984 0.000 0.000 - LGA E 15 E 15 13.079 0 0.046 1.149 16.001 0.000 0.000 16.001 LGA T 16 T 16 10.983 0 0.042 0.166 11.810 0.000 0.000 6.616 LGA G 17 G 17 11.928 0 0.598 0.598 11.928 0.000 0.000 - LGA Q 18 Q 18 9.099 0 0.663 1.198 14.348 0.000 0.000 13.568 LGA N 19 N 19 3.878 0 0.041 0.988 7.141 16.818 10.682 7.141 LGA W 20 W 20 3.349 0 0.584 1.306 14.434 30.455 8.701 14.434 LGA A 21 A 21 1.491 0 0.035 0.042 2.090 66.818 66.545 - LGA S 22 S 22 1.475 0 0.027 0.632 2.204 61.818 58.485 1.016 LGA L 23 L 23 1.740 0 0.059 0.142 4.156 62.273 38.864 4.156 LGA A 24 A 24 1.541 0 0.028 0.031 1.977 58.182 56.727 - LGA A 25 A 25 1.465 0 0.031 0.032 1.974 58.182 59.636 - LGA N 26 N 26 1.373 0 0.054 0.103 1.852 65.455 60.000 1.852 LGA E 27 E 27 1.223 0 0.066 0.867 3.415 58.182 52.323 3.415 LGA L 28 L 28 1.812 0 0.040 0.056 2.301 44.545 47.727 1.821 LGA R 29 R 29 2.033 0 0.088 1.407 9.751 41.364 21.983 9.751 LGA V 30 V 30 2.089 0 0.103 1.145 3.250 59.091 45.714 3.250 LGA T 31 T 31 0.710 0 0.655 0.972 4.129 60.000 48.312 2.637 LGA E 32 E 32 1.061 0 0.101 1.448 4.157 74.091 47.677 3.735 LGA R 33 R 33 2.730 0 0.017 0.760 14.620 20.455 7.438 14.620 LGA P 34 P 34 1.951 0 0.613 0.619 4.792 29.545 26.234 3.534 LGA F 35 F 35 3.763 0 0.603 1.408 10.207 34.545 12.562 10.207 LGA W 36 W 36 1.267 0 0.616 1.144 6.179 58.182 34.675 5.053 LGA I 37 I 37 4.216 0 0.102 0.948 8.593 5.000 2.500 8.593 LGA S 38 S 38 7.967 0 0.121 0.650 10.662 0.000 0.000 10.662 LGA S 39 S 39 7.367 0 0.160 0.706 8.734 0.000 0.000 7.790 LGA F 40 F 40 4.665 0 0.131 1.304 8.394 0.455 3.306 8.102 LGA I 41 I 41 8.613 0 0.600 0.572 12.186 0.000 0.000 11.491 LGA G 42 G 42 11.910 0 0.568 0.568 14.318 0.000 0.000 - LGA R 43 R 43 12.304 0 0.609 1.270 14.124 0.000 0.000 12.595 LGA S 44 S 44 18.016 0 0.623 0.844 21.583 0.000 0.000 18.203 LGA K 45 K 45 21.245 0 0.030 0.878 23.264 0.000 0.000 20.366 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.016 7.119 8.435 22.128 17.436 8.312 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 22 2.53 47.159 43.212 0.835 LGA_LOCAL RMSD: 2.535 Number of atoms: 22 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.807 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.016 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.859416 * X + -0.356378 * Y + -0.366604 * Z + -0.136083 Y_new = 0.020920 * X + -0.691925 * Y + 0.721666 * Z + 44.789234 Z_new = -0.510848 * X + -0.627881 * Y + -0.587196 * Z + -12.450149 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.024337 0.536171 -2.322724 [DEG: 1.3944 30.7203 -133.0823 ] ZXZ: -2.671568 2.198387 -2.458610 [DEG: -153.0696 125.9583 -140.8680 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS241_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 22 2.53 43.212 7.02 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS241_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 20 N ALA 2 4.659 40.508 15.083 1.00 0.00 ATOM 22 CA ALA 2 3.715 41.484 15.632 1.00 0.00 ATOM 24 CB ALA 2 2.817 40.822 16.649 1.00 0.00 ATOM 28 C ALA 2 4.462 42.670 16.260 1.00 0.00 ATOM 29 O ALA 2 5.560 42.479 16.789 1.00 0.00 ATOM 30 N VAL 3 3.883 43.891 16.223 1.00 0.00 ATOM 32 CA VAL 3 2.544 44.187 15.688 1.00 0.00 ATOM 34 CB VAL 3 1.909 45.333 16.474 1.00 0.00 ATOM 36 CG1 VAL 3 0.571 45.693 15.847 1.00 0.00 ATOM 40 CG2 VAL 3 1.741 44.901 17.927 1.00 0.00 ATOM 44 C VAL 3 2.482 44.519 14.203 1.00 0.00 ATOM 45 O VAL 3 1.709 43.899 13.475 1.00 0.00 ATOM 46 N GLN 4 3.268 45.480 13.727 1.00 0.00 ATOM 48 CA GLN 4 3.153 45.802 12.309 1.00 0.00 ATOM 50 CB GLN 4 3.514 47.257 12.016 1.00 0.00 ATOM 53 CG GLN 4 2.589 48.264 12.666 1.00 0.00 ATOM 56 CD GLN 4 1.141 48.129 12.171 1.00 0.00 ATOM 57 OE1 GLN 4 0.864 48.124 10.964 1.00 0.00 ATOM 58 NE2 GLN 4 0.223 48.033 13.122 1.00 0.00 ATOM 61 C GLN 4 4.017 44.866 11.500 1.00 0.00 ATOM 62 O GLN 4 5.134 44.543 11.892 1.00 0.00 ATOM 63 N GLY 5 3.483 44.441 10.377 1.00 0.00 ATOM 65 CA GLY 5 4.146 43.500 9.506 1.00 0.00 ATOM 68 C GLY 5 4.636 44.101 8.203 1.00 0.00 ATOM 69 O GLY 5 4.864 45.307 8.118 1.00 0.00 ATOM 70 N PRO 6 4.761 43.260 7.165 1.00 0.00 ATOM 71 CD PRO 6 5.252 43.851 5.930 1.00 0.00 ATOM 74 CG PRO 6 4.831 42.829 4.901 1.00 0.00 ATOM 77 CB PRO 6 4.884 41.500 5.639 1.00 0.00 ATOM 80 CA PRO 6 4.427 41.832 7.053 1.00 0.00 ATOM 82 C PRO 6 5.132 40.983 8.091 1.00 0.00 ATOM 83 O PRO 6 6.185 41.368 8.590 1.00 0.00 ATOM 84 N TRP 7 4.503 39.873 8.486 1.00 0.00 ATOM 86 CA TRP 7 5.055 39.063 9.555 1.00 0.00 ATOM 88 CB TRP 7 3.911 38.473 10.423 1.00 0.00 ATOM 91 CG TRP 7 3.075 39.496 11.274 1.00 0.00 ATOM 92 CD1 TRP 7 3.394 40.782 11.544 1.00 0.00 ATOM 94 NE1 TRP 7 2.404 41.372 12.308 1.00 0.00 ATOM 96 CE2 TRP 7 1.431 40.477 12.564 1.00 0.00 ATOM 97 CZ2 TRP 7 0.254 40.629 13.286 1.00 0.00 ATOM 99 CH2 TRP 7 -0.589 39.525 13.387 1.00 0.00 ATOM 101 CZ3 TRP 7 -0.275 38.342 12.807 1.00 0.00 ATOM 103 CE3 TRP 7 0.902 38.191 12.087 1.00 0.00 ATOM 105 CD2 TRP 7 1.775 39.280 11.955 1.00 0.00 ATOM 106 C TRP 7 5.918 37.928 9.001 1.00 0.00 ATOM 107 O TRP 7 7.096 37.822 9.355 1.00 0.00 ATOM 108 N VAL 8 5.348 37.100 8.121 1.00 0.00 ATOM 110 CA VAL 8 6.090 35.939 7.599 1.00 0.00 ATOM 112 CB VAL 8 5.614 34.625 8.205 1.00 0.00 ATOM 114 CG1 VAL 8 5.805 34.659 9.691 1.00 0.00 ATOM 118 CG2 VAL 8 4.187 34.374 7.785 1.00 0.00 ATOM 122 C VAL 8 6.054 35.777 6.092 1.00 0.00 ATOM 123 O VAL 8 5.401 36.542 5.375 1.00 0.00 ATOM 124 N GLY 9 6.827 34.796 5.615 1.00 0.00 ATOM 126 CA GLY 9 6.815 34.411 4.216 1.00 0.00 ATOM 129 C GLY 9 6.160 33.037 3.991 1.00 0.00 ATOM 130 O GLY 9 5.515 32.456 4.891 1.00 0.00 ATOM 131 N SER 10 6.431 32.497 2.801 1.00 0.00 ATOM 133 CA SER 10 5.872 31.249 2.284 1.00 0.00 ATOM 135 CB SER 10 6.369 31.043 0.866 1.00 0.00 ATOM 138 OG SER 10 7.757 30.846 0.847 1.00 0.00 ATOM 140 C SER 10 6.183 30.003 3.102 1.00 0.00 ATOM 141 O SER 10 5.428 29.031 3.049 1.00 0.00 ATOM 142 N SER 11 7.213 30.061 3.948 1.00 0.00 ATOM 144 CA SER 11 7.598 28.908 4.758 1.00 0.00 ATOM 146 CB SER 11 8.821 29.245 5.592 1.00 0.00 ATOM 149 OG SER 11 8.521 30.225 6.538 1.00 0.00 ATOM 151 C SER 11 6.470 28.437 5.681 1.00 0.00 ATOM 152 O SER 11 6.469 27.282 6.108 1.00 0.00 ATOM 153 N TYR 12 5.502 29.312 5.974 1.00 0.00 ATOM 155 CA TYR 12 4.372 28.897 6.793 1.00 0.00 ATOM 157 CB TYR 12 4.256 29.762 8.048 1.00 0.00 ATOM 160 CG TYR 12 5.439 29.750 8.941 1.00 0.00 ATOM 161 CD1 TYR 12 6.230 30.864 8.991 1.00 0.00 ATOM 163 CE1 TYR 12 7.331 30.902 9.813 1.00 0.00 ATOM 165 CZ TYR 12 7.635 29.795 10.601 1.00 0.00 ATOM 166 OH TYR 12 8.733 29.823 11.429 1.00 0.00 ATOM 168 CE2 TYR 12 6.832 28.672 10.552 1.00 0.00 ATOM 170 CD2 TYR 12 5.732 28.649 9.719 1.00 0.00 ATOM 172 C TYR 12 3.071 29.044 6.013 1.00 0.00 ATOM 173 O TYR 12 2.159 28.193 6.059 1.00 0.00 ATOM 174 N VAL 13 2.979 30.107 5.238 1.00 0.00 ATOM 176 CA VAL 13 1.670 30.398 4.719 1.00 0.00 ATOM 178 CB VAL 13 1.509 31.886 4.641 1.00 0.00 ATOM 180 CG1 VAL 13 1.787 32.390 6.049 1.00 0.00 ATOM 184 CG2 VAL 13 2.411 32.465 3.600 1.00 0.00 ATOM 188 C VAL 13 1.363 29.722 3.412 1.00 0.00 ATOM 189 O VAL 13 0.200 29.635 3.029 1.00 0.00 ATOM 190 N ALA 14 2.375 29.135 2.769 1.00 0.00 ATOM 192 CA ALA 14 2.139 28.377 1.558 1.00 0.00 ATOM 194 CB ALA 14 3.442 27.856 0.991 1.00 0.00 ATOM 198 C ALA 14 1.195 27.209 1.841 1.00 0.00 ATOM 199 O ALA 14 0.520 26.722 0.934 1.00 0.00 ATOM 200 N GLU 15 1.194 26.714 3.089 1.00 0.00 ATOM 202 CA GLU 15 0.370 25.577 3.454 1.00 0.00 ATOM 204 CB GLU 15 1.189 24.588 4.292 1.00 0.00 ATOM 207 CG GLU 15 2.390 23.982 3.557 1.00 0.00 ATOM 210 CD GLU 15 3.185 22.998 4.399 1.00 0.00 ATOM 211 OE1 GLU 15 2.885 22.849 5.560 1.00 0.00 ATOM 212 OE2 GLU 15 4.097 22.401 3.872 1.00 0.00 ATOM 213 C GLU 15 -0.888 25.990 4.224 1.00 0.00 ATOM 214 O GLU 15 -1.913 25.311 4.141 1.00 0.00 ATOM 215 N THR 16 -0.811 27.095 4.979 1.00 0.00 ATOM 217 CA THR 16 -1.935 27.484 5.832 1.00 0.00 ATOM 219 CB THR 16 -1.430 27.501 7.286 1.00 0.00 ATOM 221 CG2 THR 16 -0.998 26.120 7.714 1.00 0.00 ATOM 225 OG1 THR 16 -0.328 28.388 7.401 1.00 0.00 ATOM 227 C THR 16 -2.722 28.784 5.490 1.00 0.00 ATOM 228 O THR 16 -3.862 28.933 5.951 1.00 0.00 ATOM 229 N GLY 17 -2.160 29.726 4.729 1.00 0.00 ATOM 231 CA GLY 17 -2.904 30.947 4.392 1.00 0.00 ATOM 234 C GLY 17 -3.459 31.713 5.599 1.00 0.00 ATOM 235 O GLY 17 -2.755 32.034 6.566 1.00 0.00 ATOM 236 N GLN 18 -4.775 31.946 5.545 1.00 0.00 ATOM 238 CA GLN 18 -5.526 32.666 6.576 1.00 0.00 ATOM 240 CB GLN 18 -6.994 32.823 6.177 1.00 0.00 ATOM 243 CG GLN 18 -7.266 33.767 5.003 1.00 0.00 ATOM 246 CD GLN 18 -6.920 35.230 5.300 1.00 0.00 ATOM 247 OE1 GLN 18 -6.147 35.846 4.564 1.00 0.00 ATOM 248 NE2 GLN 18 -7.490 35.777 6.377 1.00 0.00 ATOM 251 C GLN 18 -5.464 31.973 7.923 1.00 0.00 ATOM 252 O GLN 18 -5.610 32.619 8.969 1.00 0.00 ATOM 253 N ASN 19 -5.279 30.655 7.919 1.00 0.00 ATOM 255 CA ASN 19 -5.234 29.949 9.183 1.00 0.00 ATOM 257 CB ASN 19 -5.258 28.454 8.973 1.00 0.00 ATOM 260 CG ASN 19 -6.600 27.956 8.535 1.00 0.00 ATOM 261 OD1 ASN 19 -7.642 28.575 8.794 1.00 0.00 ATOM 262 ND2 ASN 19 -6.598 26.836 7.858 1.00 0.00 ATOM 265 C ASN 19 -3.987 30.374 9.930 1.00 0.00 ATOM 266 O ASN 19 -3.976 30.418 11.160 1.00 0.00 ATOM 267 N TRP 20 -2.924 30.701 9.187 1.00 0.00 ATOM 269 CA TRP 20 -1.710 31.128 9.835 1.00 0.00 ATOM 271 CB TRP 20 -0.548 31.317 8.879 1.00 0.00 ATOM 274 CG TRP 20 0.643 31.688 9.620 1.00 0.00 ATOM 275 CD1 TRP 20 1.499 30.838 10.240 1.00 0.00 ATOM 277 NE1 TRP 20 2.467 31.537 10.882 1.00 0.00 ATOM 279 CE2 TRP 20 2.257 32.858 10.675 1.00 0.00 ATOM 280 CZ2 TRP 20 2.939 33.923 11.131 1.00 0.00 ATOM 282 CH2 TRP 20 2.497 35.161 10.752 1.00 0.00 ATOM 284 CZ3 TRP 20 1.407 35.336 9.935 1.00 0.00 ATOM 286 CE3 TRP 20 0.706 34.266 9.488 1.00 0.00 ATOM 288 CD2 TRP 20 1.130 32.998 9.867 1.00 0.00 ATOM 289 C TRP 20 -1.969 32.436 10.517 1.00 0.00 ATOM 290 O TRP 20 -1.621 32.615 11.675 1.00 0.00 ATOM 291 N ALA 21 -2.597 33.361 9.789 1.00 0.00 ATOM 293 CA ALA 21 -2.862 34.685 10.352 1.00 0.00 ATOM 295 CB ALA 21 -3.570 35.552 9.355 1.00 0.00 ATOM 299 C ALA 21 -3.717 34.618 11.600 1.00 0.00 ATOM 300 O ALA 21 -3.476 35.346 12.568 1.00 0.00 ATOM 301 N SER 22 -4.716 33.736 11.596 1.00 0.00 ATOM 303 CA SER 22 -5.578 33.637 12.759 1.00 0.00 ATOM 305 CB SER 22 -6.749 32.727 12.447 1.00 0.00 ATOM 308 OG SER 22 -7.571 33.284 11.451 1.00 0.00 ATOM 310 C SER 22 -4.802 33.101 13.957 1.00 0.00 ATOM 311 O SER 22 -4.900 33.628 15.075 1.00 0.00 ATOM 312 N LEU 23 -4.004 32.057 13.725 1.00 0.00 ATOM 314 CA LEU 23 -3.249 31.471 14.813 1.00 0.00 ATOM 316 CB LEU 23 -2.616 30.163 14.343 1.00 0.00 ATOM 319 CG LEU 23 -3.600 29.026 14.065 1.00 0.00 ATOM 321 CD1 LEU 23 -2.863 27.877 13.403 1.00 0.00 ATOM 325 CD2 LEU 23 -4.240 28.592 15.372 1.00 0.00 ATOM 329 C LEU 23 -2.171 32.415 15.293 1.00 0.00 ATOM 330 O LEU 23 -1.998 32.599 16.495 1.00 0.00 ATOM 331 N ALA 24 -1.488 33.057 14.350 1.00 0.00 ATOM 333 CA ALA 24 -0.412 33.973 14.656 1.00 0.00 ATOM 335 CB ALA 24 0.235 34.445 13.377 1.00 0.00 ATOM 339 C ALA 24 -0.906 35.157 15.439 1.00 0.00 ATOM 340 O ALA 24 -0.275 35.566 16.407 1.00 0.00 ATOM 341 N ALA 25 -2.058 35.710 15.090 1.00 0.00 ATOM 343 CA ALA 25 -2.530 36.845 15.851 1.00 0.00 ATOM 345 CB ALA 25 -3.799 37.401 15.271 1.00 0.00 ATOM 349 C ALA 25 -2.717 36.459 17.318 1.00 0.00 ATOM 350 O ALA 25 -2.375 37.203 18.237 1.00 0.00 ATOM 351 N ASN 26 -3.214 35.237 17.548 1.00 0.00 ATOM 353 CA ASN 26 -3.398 34.806 18.924 1.00 0.00 ATOM 355 CB ASN 26 -4.315 33.602 18.949 1.00 0.00 ATOM 358 CG ASN 26 -5.748 33.972 18.655 1.00 0.00 ATOM 359 OD1 ASN 26 -6.168 35.126 18.823 1.00 0.00 ATOM 360 ND2 ASN 26 -6.510 33.010 18.207 1.00 0.00 ATOM 363 C ASN 26 -2.055 34.501 19.606 1.00 0.00 ATOM 364 O ASN 26 -1.786 34.992 20.705 1.00 0.00 ATOM 365 N GLU 27 -1.178 33.760 18.925 1.00 0.00 ATOM 367 CA GLU 27 0.121 33.361 19.484 1.00 0.00 ATOM 369 CB GLU 27 0.866 32.434 18.515 1.00 0.00 ATOM 372 CG GLU 27 0.275 31.032 18.366 1.00 0.00 ATOM 375 CD GLU 27 0.998 30.190 17.326 1.00 0.00 ATOM 376 OE1 GLU 27 1.857 30.711 16.649 1.00 0.00 ATOM 377 OE2 GLU 27 0.690 29.026 17.219 1.00 0.00 ATOM 378 C GLU 27 1.015 34.554 19.787 1.00 0.00 ATOM 379 O GLU 27 1.719 34.588 20.806 1.00 0.00 ATOM 380 N LEU 28 0.954 35.559 18.924 1.00 0.00 ATOM 382 CA LEU 28 1.763 36.754 19.032 1.00 0.00 ATOM 384 CB LEU 28 1.943 37.351 17.636 1.00 0.00 ATOM 387 CG LEU 28 2.675 36.463 16.620 1.00 0.00 ATOM 389 CD1 LEU 28 2.649 37.128 15.232 1.00 0.00 ATOM 393 CD2 LEU 28 4.067 36.228 17.092 1.00 0.00 ATOM 397 C LEU 28 1.126 37.786 19.962 1.00 0.00 ATOM 398 O LEU 28 1.694 38.858 20.186 1.00 0.00 ATOM 399 N ARG 29 -0.059 37.465 20.501 1.00 0.00 ATOM 401 CA ARG 29 -0.811 38.332 21.396 1.00 0.00 ATOM 403 CB ARG 29 -0.089 38.454 22.735 1.00 0.00 ATOM 406 CG ARG 29 -0.354 37.312 23.730 1.00 0.00 ATOM 409 CD ARG 29 0.328 36.015 23.345 1.00 0.00 ATOM 412 NE ARG 29 0.158 34.999 24.390 1.00 0.00 ATOM 414 CZ ARG 29 0.573 33.705 24.333 1.00 0.00 ATOM 415 NH1 ARG 29 1.199 33.222 23.277 1.00 0.00 ATOM 418 NH2 ARG 29 0.345 32.908 25.367 1.00 0.00 ATOM 421 C ARG 29 -1.059 39.721 20.814 1.00 0.00 ATOM 422 O ARG 29 -0.827 40.731 21.487 1.00 0.00 ATOM 423 N VAL 30 -1.524 39.778 19.564 1.00 0.00 ATOM 425 CA VAL 30 -1.746 41.054 18.895 1.00 0.00 ATOM 427 CB VAL 30 -0.757 41.154 17.734 1.00 0.00 ATOM 429 CG1 VAL 30 -0.882 39.960 16.886 1.00 0.00 ATOM 433 CG2 VAL 30 -1.049 42.376 16.869 1.00 0.00 ATOM 437 C VAL 30 -3.148 41.342 18.391 1.00 0.00 ATOM 438 O VAL 30 -3.788 40.516 17.734 1.00 0.00 ATOM 439 N THR 31 -3.592 42.564 18.669 1.00 0.00 ATOM 441 CA THR 31 -4.866 43.059 18.191 1.00 0.00 ATOM 443 CB THR 31 -5.758 43.566 19.339 1.00 0.00 ATOM 445 CG2 THR 31 -7.071 44.102 18.793 1.00 0.00 ATOM 449 OG1 THR 31 -6.020 42.493 20.253 1.00 0.00 ATOM 451 C THR 31 -4.609 44.176 17.193 1.00 0.00 ATOM 452 O THR 31 -3.901 45.140 17.494 1.00 0.00 ATOM 453 N GLU 32 -5.174 44.013 16.014 1.00 0.00 ATOM 455 CA GLU 32 -5.066 44.921 14.877 1.00 0.00 ATOM 457 CB GLU 32 -3.690 44.775 14.175 1.00 0.00 ATOM 460 CG GLU 32 -3.436 45.694 12.912 1.00 0.00 ATOM 463 CD GLU 32 -3.596 47.210 13.136 1.00 0.00 ATOM 464 OE1 GLU 32 -4.726 47.652 13.176 1.00 0.00 ATOM 465 OE2 GLU 32 -2.614 47.920 13.198 1.00 0.00 ATOM 466 C GLU 32 -6.245 44.637 13.957 1.00 0.00 ATOM 467 O GLU 32 -6.879 43.589 14.059 1.00 0.00 ATOM 468 N ARG 33 -6.565 45.566 13.078 1.00 0.00 ATOM 470 CA ARG 33 -7.653 45.336 12.148 1.00 0.00 ATOM 472 CB ARG 33 -7.814 46.539 11.236 1.00 0.00 ATOM 475 CG ARG 33 -8.272 47.817 11.926 1.00 0.00 ATOM 478 CD ARG 33 -8.368 48.969 10.967 1.00 0.00 ATOM 481 NE ARG 33 -8.830 50.196 11.619 1.00 0.00 ATOM 483 CZ ARG 33 -8.032 51.063 12.282 1.00 0.00 ATOM 484 NH1 ARG 33 -6.739 50.839 12.372 1.00 0.00 ATOM 487 NH2 ARG 33 -8.553 52.141 12.844 1.00 0.00 ATOM 490 C ARG 33 -7.346 44.068 11.315 1.00 0.00 ATOM 491 O ARG 33 -6.237 43.956 10.772 1.00 0.00 ATOM 492 N PRO 34 -8.320 43.138 11.143 1.00 0.00 ATOM 493 CD PRO 34 -9.643 43.329 11.792 1.00 0.00 ATOM 496 CG PRO 34 -10.311 42.002 11.567 1.00 0.00 ATOM 499 CB PRO 34 -9.700 41.459 10.305 1.00 0.00 ATOM 502 CA PRO 34 -8.237 41.892 10.380 1.00 0.00 ATOM 504 C PRO 34 -7.629 42.030 8.995 1.00 0.00 ATOM 505 O PRO 34 -6.953 41.120 8.516 1.00 0.00 ATOM 506 N PHE 35 -7.871 43.168 8.327 1.00 0.00 ATOM 508 CA PHE 35 -7.272 43.370 7.014 1.00 0.00 ATOM 510 CB PHE 35 -7.653 44.675 6.328 1.00 0.00 ATOM 513 CG PHE 35 -6.826 44.794 5.072 1.00 0.00 ATOM 514 CD1 PHE 35 -7.155 44.142 3.906 1.00 0.00 ATOM 516 CE1 PHE 35 -6.304 44.215 2.825 1.00 0.00 ATOM 518 CZ PHE 35 -5.132 44.939 2.920 1.00 0.00 ATOM 520 CE2 PHE 35 -4.827 45.584 4.072 1.00 0.00 ATOM 522 CD2 PHE 35 -5.667 45.497 5.110 1.00 0.00 ATOM 524 C PHE 35 -5.758 43.287 7.095 1.00 0.00 ATOM 525 O PHE 35 -5.111 42.688 6.228 1.00 0.00 ATOM 526 N TRP 36 -5.171 43.981 8.072 1.00 0.00 ATOM 528 CA TRP 36 -3.724 44.040 8.144 1.00 0.00 ATOM 530 CB TRP 36 -3.273 45.267 8.938 1.00 0.00 ATOM 533 CG TRP 36 -3.302 46.517 8.093 1.00 0.00 ATOM 534 CD1 TRP 36 -2.249 47.032 7.400 1.00 0.00 ATOM 536 NE1 TRP 36 -2.636 48.140 6.703 1.00 0.00 ATOM 538 CE2 TRP 36 -3.969 48.361 6.921 1.00 0.00 ATOM 539 CZ2 TRP 36 -4.806 49.329 6.406 1.00 0.00 ATOM 541 CH2 TRP 36 -6.145 49.303 6.793 1.00 0.00 ATOM 543 CZ3 TRP 36 -6.616 48.360 7.655 1.00 0.00 ATOM 545 CE3 TRP 36 -5.768 47.381 8.176 1.00 0.00 ATOM 547 CD2 TRP 36 -4.429 47.380 7.798 1.00 0.00 ATOM 548 C TRP 36 -3.204 42.743 8.709 1.00 0.00 ATOM 549 O TRP 36 -2.181 42.234 8.256 1.00 0.00 ATOM 550 N ILE 37 -3.950 42.125 9.611 1.00 0.00 ATOM 552 CA ILE 37 -3.505 40.836 10.119 1.00 0.00 ATOM 554 CB ILE 37 -4.378 40.345 11.276 1.00 0.00 ATOM 556 CG2 ILE 37 -4.122 38.911 11.572 1.00 0.00 ATOM 560 CG1 ILE 37 -4.157 41.245 12.486 1.00 0.00 ATOM 563 CD1 ILE 37 -5.129 41.031 13.610 1.00 0.00 ATOM 567 C ILE 37 -3.422 39.826 8.970 1.00 0.00 ATOM 568 O ILE 37 -2.458 39.072 8.847 1.00 0.00 ATOM 569 N SER 38 -4.448 39.826 8.111 1.00 0.00 ATOM 571 CA SER 38 -4.471 38.964 6.938 1.00 0.00 ATOM 573 CB SER 38 -5.819 39.071 6.264 1.00 0.00 ATOM 576 OG SER 38 -6.837 38.592 7.102 1.00 0.00 ATOM 578 C SER 38 -3.374 39.365 5.939 1.00 0.00 ATOM 579 O SER 38 -2.679 38.525 5.384 1.00 0.00 ATOM 580 N SER 39 -3.155 40.652 5.735 1.00 0.00 ATOM 582 CA SER 39 -2.128 41.076 4.792 1.00 0.00 ATOM 584 CB SER 39 -2.105 42.573 4.716 1.00 0.00 ATOM 587 OG SER 39 -3.288 43.032 4.174 1.00 0.00 ATOM 589 C SER 39 -0.749 40.571 5.201 1.00 0.00 ATOM 590 O SER 39 0.045 40.127 4.361 1.00 0.00 ATOM 591 N PHE 40 -0.505 40.569 6.512 1.00 0.00 ATOM 593 CA PHE 40 0.771 40.198 7.090 1.00 0.00 ATOM 595 CB PHE 40 0.800 40.628 8.554 1.00 0.00 ATOM 598 CG PHE 40 0.733 42.157 8.750 1.00 0.00 ATOM 599 CD1 PHE 40 1.054 43.054 7.727 1.00 0.00 ATOM 601 CE1 PHE 40 0.974 44.421 7.930 1.00 0.00 ATOM 603 CZ PHE 40 0.571 44.921 9.152 1.00 0.00 ATOM 605 CE2 PHE 40 0.249 44.049 10.172 1.00 0.00 ATOM 607 CD2 PHE 40 0.331 42.691 9.967 1.00 0.00 ATOM 609 C PHE 40 1.123 38.701 6.950 1.00 0.00 ATOM 610 O PHE 40 2.232 38.284 7.323 1.00 0.00 ATOM 611 N ILE 41 0.199 37.927 6.339 1.00 0.00 ATOM 613 CA ILE 41 0.390 36.521 6.002 1.00 0.00 ATOM 615 CB ILE 41 -0.846 35.946 5.271 1.00 0.00 ATOM 617 CG2 ILE 41 -0.588 34.651 4.688 1.00 0.00 ATOM 621 CG1 ILE 41 -1.936 35.817 6.179 1.00 0.00 ATOM 624 CD1 ILE 41 -3.253 35.526 5.516 1.00 0.00 ATOM 628 C ILE 41 1.574 36.363 5.086 1.00 0.00 ATOM 629 O ILE 41 2.330 35.411 5.214 1.00 0.00 ATOM 630 N GLY 42 1.741 37.243 4.123 1.00 0.00 ATOM 632 CA GLY 42 2.889 37.013 3.283 1.00 0.00 ATOM 635 C GLY 42 3.549 38.274 2.815 1.00 0.00 ATOM 636 O GLY 42 2.976 39.090 2.096 1.00 0.00 ATOM 637 N ARG 43 4.831 38.357 3.132 1.00 0.00 ATOM 639 CA ARG 43 5.667 39.477 2.742 1.00 0.00 ATOM 641 CB ARG 43 7.067 39.320 3.320 1.00 0.00 ATOM 644 CG ARG 43 7.959 40.534 3.154 1.00 0.00 ATOM 647 CD ARG 43 9.265 40.385 3.843 1.00 0.00 ATOM 650 NE ARG 43 9.108 40.233 5.295 1.00 0.00 ATOM 652 CZ ARG 43 8.924 41.250 6.170 1.00 0.00 ATOM 653 NH1 ARG 43 8.857 42.489 5.739 1.00 0.00 ATOM 656 NH2 ARG 43 8.814 40.997 7.462 1.00 0.00 ATOM 659 C ARG 43 5.684 39.621 1.231 1.00 0.00 ATOM 660 O ARG 43 5.719 40.725 0.710 1.00 0.00 ATOM 661 N SER 44 5.630 38.491 0.540 1.00 0.00 ATOM 663 CA SER 44 5.666 38.430 -0.915 1.00 0.00 ATOM 665 CB SER 44 6.410 37.186 -1.361 1.00 0.00 ATOM 668 OG SER 44 5.741 36.021 -0.960 1.00 0.00 ATOM 670 C SER 44 4.275 38.464 -1.569 1.00 0.00 ATOM 671 O SER 44 4.149 38.150 -2.757 1.00 0.00 ATOM 672 N LYS 45 3.222 38.789 -0.805 1.00 0.00 ATOM 674 CA LYS 45 1.870 38.892 -1.364 1.00 0.00 ATOM 676 CB LYS 45 0.868 38.200 -0.438 1.00 0.00 ATOM 679 CG LYS 45 1.105 36.689 -0.302 1.00 0.00 ATOM 682 CD LYS 45 0.078 36.018 0.615 1.00 0.00 ATOM 685 CE LYS 45 0.385 34.527 0.799 1.00 0.00 ATOM 688 NZ LYS 45 0.288 33.767 -0.495 1.00 0.00 ATOM 692 C LYS 45 1.481 40.363 -1.605 1.00 0.00 ATOM 693 O LYS 45 2.010 41.273 -0.968 1.00 0.00 TER END