####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS241_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.51 4.51 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.92 5.60 LCS_AVERAGE: 35.69 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.54 5.87 LCS_AVERAGE: 16.68 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 44 0 3 3 5 13 18 24 27 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 3 8 44 3 5 7 11 12 19 24 28 31 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 3 8 44 3 5 6 11 17 23 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 3 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 4 8 44 3 3 4 7 14 20 28 32 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 4 8 44 3 4 4 7 13 15 25 31 33 36 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 4 10 44 3 4 6 7 18 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 11 44 8 11 13 15 17 22 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 12 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 13 16 21 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 10 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 11 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 14 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 4 9 10 17 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 3 22 44 3 3 3 10 16 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 3 6 7 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 10 12 13 15 20 23 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 6 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 7 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 5 8 14 24 26 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 2 3 3 11 16 22 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 7 44 1 3 3 5 7 13 16 22 26 29 34 38 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 7 44 3 3 13 15 20 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 6 10 44 4 5 7 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 6 10 44 4 5 8 14 20 24 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 6 10 44 4 5 7 15 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 5 9 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 5 7 11 11 21 28 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 4 5 11 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 5 10 44 4 5 6 11 11 11 14 28 31 35 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 5 10 44 4 5 7 11 11 11 14 17 21 28 33 40 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 5 10 44 3 4 6 11 11 11 14 15 17 21 25 29 32 36 40 43 43 43 43 43 LCS_GDT K 45 K 45 4 10 44 0 0 4 11 11 11 12 14 15 18 19 23 24 28 31 34 38 41 41 43 LCS_AVERAGE LCS_A: 50.79 ( 16.68 35.69 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 13 18 22 25 29 33 35 38 39 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 22.73 27.27 29.55 40.91 50.00 56.82 65.91 75.00 79.55 86.36 88.64 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.40 0.54 0.62 1.51 1.72 1.91 2.26 2.53 2.73 3.05 3.15 3.30 3.53 3.67 3.67 3.99 3.99 3.99 3.99 3.99 GDT RMS_ALL_AT 5.76 5.87 5.90 4.83 4.96 5.05 5.17 5.15 4.97 4.81 4.80 4.71 4.62 4.62 4.62 4.54 4.54 4.54 4.54 4.54 # Checking swapping # possible swapping detected: E 15 E 15 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 7.387 0 0.386 0.395 8.352 0.000 0.000 - LGA V 3 V 3 5.900 0 0.235 1.057 6.153 0.000 0.000 6.058 LGA Q 4 Q 4 4.831 0 0.042 0.220 8.629 11.818 5.253 7.088 LGA G 5 G 5 2.919 0 0.261 0.261 6.197 11.818 11.818 - LGA P 6 P 6 5.874 0 0.083 0.152 7.511 0.000 0.000 7.511 LGA W 7 W 7 6.758 0 0.195 1.259 12.534 0.455 0.130 12.389 LGA V 8 V 8 3.889 0 0.417 1.042 6.577 25.455 16.883 3.980 LGA G 9 G 9 4.216 0 0.555 0.555 4.216 15.000 15.000 - LGA S 10 S 10 2.020 0 0.111 0.102 2.540 53.182 48.485 1.869 LGA S 11 S 11 1.494 0 0.128 0.839 3.072 65.909 51.515 3.072 LGA Y 12 Y 12 2.280 0 0.069 0.824 10.359 48.182 17.576 10.359 LGA V 13 V 13 2.154 0 0.080 1.100 6.385 44.545 30.909 6.385 LGA A 14 A 14 2.854 0 0.075 0.090 3.868 29.091 26.909 - LGA E 15 E 15 3.008 0 0.054 1.197 4.787 25.455 17.172 3.980 LGA T 16 T 16 1.239 0 0.085 0.209 1.931 61.818 65.974 0.824 LGA G 17 G 17 1.806 0 0.635 0.635 2.986 48.636 48.636 - LGA Q 18 Q 18 3.465 0 0.611 0.467 7.947 18.636 8.283 7.947 LGA N 19 N 19 2.833 0 0.446 1.375 9.059 38.636 19.545 6.805 LGA W 20 W 20 3.133 0 0.494 1.144 10.736 40.000 11.429 10.736 LGA A 21 A 21 1.352 0 0.033 0.052 1.840 61.818 62.545 - LGA S 22 S 22 1.237 0 0.034 0.598 1.763 65.455 60.606 1.763 LGA L 23 L 23 1.659 0 0.073 1.406 6.249 58.182 34.773 4.221 LGA A 24 A 24 1.631 0 0.041 0.059 1.829 58.182 56.727 - LGA A 25 A 25 0.670 0 0.025 0.037 1.207 77.727 82.182 - LGA N 26 N 26 0.666 0 0.019 0.488 1.225 77.727 75.682 1.214 LGA E 27 E 27 1.128 0 0.153 1.444 6.513 62.727 37.374 6.513 LGA L 28 L 28 1.508 0 0.107 1.406 5.564 51.364 32.955 5.564 LGA R 29 R 29 1.402 0 0.033 1.914 11.473 65.455 27.769 11.473 LGA V 30 V 30 1.074 0 0.237 1.098 2.584 73.636 62.597 2.584 LGA T 31 T 31 1.457 0 0.704 0.779 5.436 45.000 29.870 3.299 LGA E 32 E 32 5.578 0 0.456 1.126 9.924 5.455 2.424 8.977 LGA R 33 R 33 3.949 0 0.158 0.989 8.007 4.091 6.281 5.703 LGA P 34 P 34 6.911 0 0.656 0.612 8.336 0.000 0.000 8.336 LGA F 35 F 35 3.040 0 0.619 1.163 9.960 19.545 8.099 9.960 LGA W 36 W 36 3.669 0 0.599 0.612 8.771 26.364 7.532 8.702 LGA I 37 I 37 3.643 0 0.090 0.881 7.012 30.000 15.227 7.012 LGA S 38 S 38 2.756 0 0.101 0.569 6.263 25.909 17.576 6.263 LGA S 39 S 39 2.649 0 0.211 0.738 4.946 28.182 25.152 3.989 LGA F 40 F 40 3.481 0 0.201 0.337 10.570 19.545 7.603 10.346 LGA I 41 I 41 2.246 0 0.070 0.588 5.857 26.364 17.955 5.475 LGA G 42 G 42 8.527 0 0.144 0.144 11.586 0.000 0.000 - LGA R 43 R 43 10.480 0 0.263 1.387 14.106 0.000 0.000 14.106 LGA S 44 S 44 13.605 0 0.486 0.841 16.357 0.000 0.000 15.116 LGA K 45 K 45 17.835 0 0.583 0.812 19.918 0.000 0.000 19.593 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.508 4.554 6.082 32.304 24.237 10.026 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 33 2.53 60.227 56.700 1.255 LGA_LOCAL RMSD: 2.530 Number of atoms: 33 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 5.154 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.508 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.673300 * X + -0.551107 * Y + -0.492898 * Z + 38.807270 Y_new = 0.358485 * X + -0.339717 * Y + 0.869529 * Z + -24.509289 Z_new = -0.646649 * X + -0.762151 * Y + -0.031168 * Z + 94.888695 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.489254 0.703183 -1.611669 [DEG: 28.0322 40.2894 -92.3418 ] ZXZ: -2.625900 1.601970 -2.437997 [DEG: -150.4530 91.7861 -139.6870 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS241_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS241_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 33 2.53 56.700 4.51 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS241_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 9.181 42.026 11.761 1.00 0.00 ATOM 22 CA ALA 2 9.047 42.933 10.615 1.00 0.00 ATOM 24 CB ALA 2 8.876 44.383 11.099 1.00 0.00 ATOM 28 C ALA 2 9.893 42.685 9.354 1.00 0.00 ATOM 29 O ALA 2 10.864 43.395 9.136 1.00 0.00 ATOM 30 N VAL 3 9.602 41.619 8.590 1.00 0.00 ATOM 32 CA VAL 3 10.504 41.028 7.559 1.00 0.00 ATOM 34 CB VAL 3 10.848 39.569 7.873 1.00 0.00 ATOM 36 CG1 VAL 3 11.534 39.413 9.232 1.00 0.00 ATOM 40 CG2 VAL 3 9.657 38.618 7.762 1.00 0.00 ATOM 44 C VAL 3 9.983 41.279 6.137 1.00 0.00 ATOM 45 O VAL 3 9.174 42.172 5.947 1.00 0.00 ATOM 46 N GLN 4 10.440 40.568 5.102 1.00 0.00 ATOM 48 CA GLN 4 9.964 40.759 3.714 1.00 0.00 ATOM 50 CB GLN 4 11.141 40.778 2.733 1.00 0.00 ATOM 53 CG GLN 4 12.205 41.838 3.068 1.00 0.00 ATOM 56 CD GLN 4 13.562 41.500 2.474 1.00 0.00 ATOM 57 OE1 GLN 4 13.961 40.344 2.438 1.00 0.00 ATOM 58 NE2 GLN 4 14.330 42.476 2.062 1.00 0.00 ATOM 61 C GLN 4 8.965 39.666 3.300 1.00 0.00 ATOM 62 O GLN 4 9.063 38.527 3.765 1.00 0.00 ATOM 63 N GLY 5 8.034 40.033 2.406 1.00 0.00 ATOM 65 CA GLY 5 6.954 39.185 1.875 1.00 0.00 ATOM 68 C GLY 5 5.554 39.602 2.368 1.00 0.00 ATOM 69 O GLY 5 5.259 39.365 3.535 1.00 0.00 ATOM 70 N PRO 6 4.686 40.234 1.550 1.00 0.00 ATOM 71 CD PRO 6 4.874 40.512 0.134 1.00 0.00 ATOM 74 CG PRO 6 3.542 41.075 -0.356 1.00 0.00 ATOM 77 CB PRO 6 2.982 41.772 0.883 1.00 0.00 ATOM 80 CA PRO 6 3.466 40.894 2.042 1.00 0.00 ATOM 82 C PRO 6 2.352 39.967 2.550 1.00 0.00 ATOM 83 O PRO 6 1.601 40.368 3.432 1.00 0.00 ATOM 84 N TRP 7 2.250 38.728 2.064 1.00 0.00 ATOM 86 CA TRP 7 1.458 37.693 2.735 1.00 0.00 ATOM 88 CB TRP 7 1.120 36.563 1.743 1.00 0.00 ATOM 91 CG TRP 7 0.463 35.347 2.334 1.00 0.00 ATOM 92 CD1 TRP 7 1.114 34.245 2.772 1.00 0.00 ATOM 94 NE1 TRP 7 0.213 33.334 3.289 1.00 0.00 ATOM 96 CE2 TRP 7 -1.078 33.810 3.210 1.00 0.00 ATOM 97 CZ2 TRP 7 -2.316 33.282 3.611 1.00 0.00 ATOM 99 CH2 TRP 7 -3.481 34.037 3.395 1.00 0.00 ATOM 101 CZ3 TRP 7 -3.393 35.305 2.790 1.00 0.00 ATOM 103 CE3 TRP 7 -2.144 35.827 2.400 1.00 0.00 ATOM 105 CD2 TRP 7 -0.954 35.092 2.595 1.00 0.00 ATOM 106 C TRP 7 2.260 37.184 3.933 1.00 0.00 ATOM 107 O TRP 7 3.128 36.328 3.769 1.00 0.00 ATOM 108 N VAL 8 1.960 37.731 5.118 1.00 0.00 ATOM 110 CA VAL 8 1.964 37.053 6.434 1.00 0.00 ATOM 112 CB VAL 8 0.496 36.770 6.851 1.00 0.00 ATOM 114 CG1 VAL 8 -0.346 36.087 5.765 1.00 0.00 ATOM 118 CG2 VAL 8 0.274 36.008 8.160 1.00 0.00 ATOM 122 C VAL 8 2.916 35.860 6.571 1.00 0.00 ATOM 123 O VAL 8 2.534 34.748 6.918 1.00 0.00 ATOM 124 N GLY 9 4.196 36.145 6.333 1.00 0.00 ATOM 126 CA GLY 9 5.371 35.359 6.702 1.00 0.00 ATOM 129 C GLY 9 5.144 33.879 6.652 1.00 0.00 ATOM 130 O GLY 9 5.108 33.292 7.713 1.00 0.00 ATOM 131 N SER 10 5.030 33.300 5.462 1.00 0.00 ATOM 133 CA SER 10 4.833 31.856 5.282 1.00 0.00 ATOM 135 CB SER 10 5.184 31.472 3.840 1.00 0.00 ATOM 138 OG SER 10 6.469 31.972 3.490 1.00 0.00 ATOM 140 C SER 10 5.636 30.985 6.256 1.00 0.00 ATOM 141 O SER 10 5.088 30.065 6.860 1.00 0.00 ATOM 142 N SER 11 6.908 31.337 6.494 1.00 0.00 ATOM 144 CA SER 11 7.660 30.796 7.624 1.00 0.00 ATOM 146 CB SER 11 9.132 31.143 7.594 1.00 0.00 ATOM 149 OG SER 11 9.586 31.754 6.389 1.00 0.00 ATOM 151 C SER 11 7.005 31.049 8.995 1.00 0.00 ATOM 152 O SER 11 6.551 30.087 9.588 1.00 0.00 ATOM 153 N TYR 12 6.864 32.294 9.465 1.00 0.00 ATOM 155 CA TYR 12 6.247 32.647 10.758 1.00 0.00 ATOM 157 CB TYR 12 6.108 34.168 10.821 1.00 0.00 ATOM 160 CG TYR 12 5.359 34.692 12.015 1.00 0.00 ATOM 161 CD1 TYR 12 5.604 34.156 13.291 1.00 0.00 ATOM 163 CE1 TYR 12 4.889 34.625 14.398 1.00 0.00 ATOM 165 CZ TYR 12 3.932 35.634 14.222 1.00 0.00 ATOM 166 OH TYR 12 3.164 36.039 15.244 1.00 0.00 ATOM 168 CE2 TYR 12 3.720 36.205 12.958 1.00 0.00 ATOM 170 CD2 TYR 12 4.412 35.717 11.843 1.00 0.00 ATOM 172 C TYR 12 4.905 31.925 11.035 1.00 0.00 ATOM 173 O TYR 12 4.662 31.422 12.138 1.00 0.00 ATOM 174 N VAL 13 4.039 31.807 10.027 1.00 0.00 ATOM 176 CA VAL 13 2.795 31.050 10.164 1.00 0.00 ATOM 178 CB VAL 13 1.761 31.399 9.095 1.00 0.00 ATOM 180 CG1 VAL 13 1.267 32.829 9.277 1.00 0.00 ATOM 184 CG2 VAL 13 2.215 31.220 7.647 1.00 0.00 ATOM 188 C VAL 13 2.991 29.536 10.187 1.00 0.00 ATOM 189 O VAL 13 2.258 28.867 10.903 1.00 0.00 ATOM 190 N ALA 14 3.963 28.965 9.467 1.00 0.00 ATOM 192 CA ALA 14 4.310 27.560 9.666 1.00 0.00 ATOM 194 CB ALA 14 5.347 27.131 8.620 1.00 0.00 ATOM 198 C ALA 14 4.764 27.284 11.115 1.00 0.00 ATOM 199 O ALA 14 4.184 26.433 11.796 1.00 0.00 ATOM 200 N GLU 15 5.762 28.052 11.561 1.00 0.00 ATOM 202 CA GLU 15 6.410 28.053 12.880 1.00 0.00 ATOM 204 CB GLU 15 7.245 29.328 13.011 1.00 0.00 ATOM 207 CG GLU 15 8.377 29.371 12.008 1.00 0.00 ATOM 210 CD GLU 15 9.074 30.721 12.038 1.00 0.00 ATOM 211 OE1 GLU 15 9.523 31.094 13.143 1.00 0.00 ATOM 212 OE2 GLU 15 9.206 31.388 10.983 1.00 0.00 ATOM 213 C GLU 15 5.404 28.074 14.030 1.00 0.00 ATOM 214 O GLU 15 5.524 27.286 14.967 1.00 0.00 ATOM 215 N THR 16 4.427 28.987 13.942 1.00 0.00 ATOM 217 CA THR 16 3.369 29.144 14.949 1.00 0.00 ATOM 219 CB THR 16 2.783 30.566 14.976 1.00 0.00 ATOM 221 CG2 THR 16 3.787 31.582 15.508 1.00 0.00 ATOM 225 OG1 THR 16 2.402 31.012 13.697 1.00 0.00 ATOM 227 C THR 16 2.240 28.118 14.799 1.00 0.00 ATOM 228 O THR 16 1.649 27.721 15.806 1.00 0.00 ATOM 229 N GLY 17 1.955 27.627 13.584 1.00 0.00 ATOM 231 CA GLY 17 0.993 26.549 13.346 1.00 0.00 ATOM 234 C GLY 17 0.001 26.783 12.198 1.00 0.00 ATOM 235 O GLY 17 -0.308 27.899 11.796 1.00 0.00 ATOM 236 N GLN 18 -0.568 25.682 11.693 1.00 0.00 ATOM 238 CA GLN 18 -1.160 25.602 10.345 1.00 0.00 ATOM 240 CB GLN 18 -1.058 24.162 9.796 1.00 0.00 ATOM 243 CG GLN 18 0.294 23.449 10.035 1.00 0.00 ATOM 246 CD GLN 18 1.526 24.352 9.915 1.00 0.00 ATOM 247 OE1 GLN 18 1.694 25.101 8.967 1.00 0.00 ATOM 248 NE2 GLN 18 2.381 24.351 10.916 1.00 0.00 ATOM 251 C GLN 18 -2.573 26.221 10.175 1.00 0.00 ATOM 252 O GLN 18 -3.221 26.001 9.158 1.00 0.00 ATOM 253 N ASN 19 -3.054 27.036 11.122 1.00 0.00 ATOM 255 CA ASN 19 -4.239 27.903 10.967 1.00 0.00 ATOM 257 CB ASN 19 -5.134 27.765 12.216 1.00 0.00 ATOM 260 CG ASN 19 -6.463 28.500 12.091 1.00 0.00 ATOM 261 OD1 ASN 19 -6.904 28.887 11.023 1.00 0.00 ATOM 262 ND2 ASN 19 -7.169 28.695 13.181 1.00 0.00 ATOM 265 C ASN 19 -3.771 29.350 10.674 1.00 0.00 ATOM 266 O ASN 19 -4.071 30.310 11.393 1.00 0.00 ATOM 267 N TRP 20 -2.912 29.428 9.652 1.00 0.00 ATOM 269 CA TRP 20 -1.807 30.373 9.487 1.00 0.00 ATOM 271 CB TRP 20 -1.389 30.347 8.000 1.00 0.00 ATOM 274 CG TRP 20 -0.589 29.163 7.523 1.00 0.00 ATOM 275 CD1 TRP 20 0.105 28.294 8.299 1.00 0.00 ATOM 277 NE1 TRP 20 0.737 27.357 7.508 1.00 0.00 ATOM 279 CE2 TRP 20 0.530 27.598 6.170 1.00 0.00 ATOM 280 CZ2 TRP 20 0.974 26.959 5.001 1.00 0.00 ATOM 282 CH2 TRP 20 0.600 27.486 3.753 1.00 0.00 ATOM 284 CZ3 TRP 20 -0.211 28.633 3.692 1.00 0.00 ATOM 286 CE3 TRP 20 -0.662 29.255 4.872 1.00 0.00 ATOM 288 CD2 TRP 20 -0.310 28.752 6.145 1.00 0.00 ATOM 289 C TRP 20 -2.008 31.788 10.040 1.00 0.00 ATOM 290 O TRP 20 -1.567 32.100 11.145 1.00 0.00 ATOM 291 N ALA 21 -2.621 32.663 9.248 1.00 0.00 ATOM 293 CA ALA 21 -2.513 34.099 9.460 1.00 0.00 ATOM 295 CB ALA 21 -2.992 34.765 8.167 1.00 0.00 ATOM 299 C ALA 21 -3.247 34.594 10.722 1.00 0.00 ATOM 300 O ALA 21 -2.762 35.484 11.424 1.00 0.00 ATOM 301 N SER 22 -4.407 33.998 11.018 1.00 0.00 ATOM 303 CA SER 22 -5.197 34.247 12.227 1.00 0.00 ATOM 305 CB SER 22 -6.542 33.516 12.127 1.00 0.00 ATOM 308 OG SER 22 -7.181 33.811 10.899 1.00 0.00 ATOM 310 C SER 22 -4.482 33.760 13.492 1.00 0.00 ATOM 311 O SER 22 -4.412 34.492 14.480 1.00 0.00 ATOM 312 N LEU 23 -3.908 32.546 13.456 1.00 0.00 ATOM 314 CA LEU 23 -3.147 32.005 14.585 1.00 0.00 ATOM 316 CB LEU 23 -2.776 30.542 14.289 1.00 0.00 ATOM 319 CG LEU 23 -2.127 29.794 15.470 1.00 0.00 ATOM 321 CD1 LEU 23 -3.110 29.575 16.624 1.00 0.00 ATOM 325 CD2 LEU 23 -1.662 28.421 14.990 1.00 0.00 ATOM 329 C LEU 23 -1.904 32.839 14.910 1.00 0.00 ATOM 330 O LEU 23 -1.697 33.168 16.075 1.00 0.00 ATOM 331 N ALA 24 -1.134 33.228 13.889 1.00 0.00 ATOM 333 CA ALA 24 -0.013 34.148 14.043 1.00 0.00 ATOM 335 CB ALA 24 0.671 34.293 12.686 1.00 0.00 ATOM 339 C ALA 24 -0.469 35.502 14.625 1.00 0.00 ATOM 340 O ALA 24 0.141 36.009 15.558 1.00 0.00 ATOM 341 N ALA 25 -1.574 36.081 14.138 1.00 0.00 ATOM 343 CA ALA 25 -2.071 37.362 14.655 1.00 0.00 ATOM 345 CB ALA 25 -3.290 37.781 13.818 1.00 0.00 ATOM 349 C ALA 25 -2.390 37.331 16.157 1.00 0.00 ATOM 350 O ALA 25 -2.009 38.239 16.914 1.00 0.00 ATOM 351 N ASN 26 -3.057 36.254 16.574 1.00 0.00 ATOM 353 CA ASN 26 -3.408 36.069 17.971 1.00 0.00 ATOM 355 CB ASN 26 -4.516 35.003 18.076 1.00 0.00 ATOM 358 CG ASN 26 -5.894 35.606 17.817 1.00 0.00 ATOM 359 OD1 ASN 26 -6.123 36.345 16.877 1.00 0.00 ATOM 360 ND2 ASN 26 -6.835 35.385 18.708 1.00 0.00 ATOM 363 C ASN 26 -2.179 35.791 18.856 1.00 0.00 ATOM 364 O ASN 26 -2.132 36.323 19.967 1.00 0.00 ATOM 365 N GLU 27 -1.201 35.015 18.371 1.00 0.00 ATOM 367 CA GLU 27 0.064 34.680 19.053 1.00 0.00 ATOM 369 CB GLU 27 0.819 33.601 18.248 1.00 0.00 ATOM 372 CG GLU 27 2.188 33.177 18.828 1.00 0.00 ATOM 375 CD GLU 27 3.382 34.073 18.433 1.00 0.00 ATOM 376 OE1 GLU 27 4.328 34.212 19.241 1.00 0.00 ATOM 377 OE2 GLU 27 3.416 34.568 17.286 1.00 0.00 ATOM 378 C GLU 27 0.957 35.901 19.283 1.00 0.00 ATOM 379 O GLU 27 1.322 36.161 20.429 1.00 0.00 ATOM 380 N LEU 28 1.204 36.714 18.245 1.00 0.00 ATOM 382 CA LEU 28 1.861 38.016 18.395 1.00 0.00 ATOM 384 CB LEU 28 2.088 38.693 17.032 1.00 0.00 ATOM 387 CG LEU 28 2.880 40.019 17.042 1.00 0.00 ATOM 389 CD1 LEU 28 4.212 39.953 17.794 1.00 0.00 ATOM 393 CD2 LEU 28 3.185 40.449 15.604 1.00 0.00 ATOM 397 C LEU 28 1.103 38.952 19.359 1.00 0.00 ATOM 398 O LEU 28 1.641 39.967 19.805 1.00 0.00 ATOM 399 N ARG 29 -0.168 38.638 19.656 1.00 0.00 ATOM 401 CA ARG 29 -1.159 39.567 20.193 1.00 0.00 ATOM 403 CB ARG 29 -1.071 39.576 21.734 1.00 0.00 ATOM 406 CG ARG 29 -2.146 40.375 22.499 1.00 0.00 ATOM 409 CD ARG 29 -3.546 40.417 21.863 1.00 0.00 ATOM 412 NE ARG 29 -4.016 39.089 21.440 1.00 0.00 ATOM 414 CZ ARG 29 -5.099 38.851 20.726 1.00 0.00 ATOM 415 NH1 ARG 29 -5.321 37.656 20.284 1.00 0.00 ATOM 418 NH2 ARG 29 -5.982 39.760 20.447 1.00 0.00 ATOM 421 C ARG 29 -1.123 40.926 19.488 1.00 0.00 ATOM 422 O ARG 29 -1.304 41.975 20.110 1.00 0.00 ATOM 423 N VAL 30 -1.039 40.895 18.150 1.00 0.00 ATOM 425 CA VAL 30 -1.773 41.932 17.412 1.00 0.00 ATOM 427 CB VAL 30 -1.339 42.089 15.944 1.00 0.00 ATOM 429 CG1 VAL 30 0.070 42.682 15.840 1.00 0.00 ATOM 433 CG2 VAL 30 -1.401 40.795 15.144 1.00 0.00 ATOM 437 C VAL 30 -3.280 41.663 17.602 1.00 0.00 ATOM 438 O VAL 30 -3.685 40.651 18.180 1.00 0.00 ATOM 439 N THR 31 -4.156 42.562 17.154 1.00 0.00 ATOM 441 CA THR 31 -5.588 42.225 17.047 1.00 0.00 ATOM 443 CB THR 31 -6.405 43.412 16.500 1.00 0.00 ATOM 445 CG2 THR 31 -7.824 43.486 17.066 1.00 0.00 ATOM 449 OG1 THR 31 -5.810 44.663 16.767 1.00 0.00 ATOM 451 C THR 31 -5.805 41.015 16.124 1.00 0.00 ATOM 452 O THR 31 -4.926 40.703 15.325 1.00 0.00 ATOM 453 N GLU 32 -7.006 40.424 16.177 1.00 0.00 ATOM 455 CA GLU 32 -7.631 39.354 15.364 1.00 0.00 ATOM 457 CB GLU 32 -9.034 39.068 15.963 1.00 0.00 ATOM 460 CG GLU 32 -9.096 38.229 17.248 1.00 0.00 ATOM 463 CD GLU 32 -8.355 38.809 18.458 1.00 0.00 ATOM 464 OE1 GLU 32 -7.869 38.006 19.284 1.00 0.00 ATOM 465 OE2 GLU 32 -8.218 40.049 18.586 1.00 0.00 ATOM 466 C GLU 32 -7.738 39.637 13.835 1.00 0.00 ATOM 467 O GLU 32 -8.791 39.487 13.209 1.00 0.00 ATOM 468 N ARG 33 -6.676 40.143 13.210 1.00 0.00 ATOM 470 CA ARG 33 -6.620 40.751 11.885 1.00 0.00 ATOM 472 CB ARG 33 -6.678 42.290 11.996 1.00 0.00 ATOM 475 CG ARG 33 -7.821 42.859 12.865 1.00 0.00 ATOM 478 CD ARG 33 -9.241 42.576 12.353 1.00 0.00 ATOM 481 NE ARG 33 -10.258 42.948 13.364 1.00 0.00 ATOM 483 CZ ARG 33 -11.098 42.147 14.008 1.00 0.00 ATOM 484 NH1 ARG 33 -11.978 42.659 14.823 1.00 0.00 ATOM 487 NH2 ARG 33 -11.111 40.851 13.887 1.00 0.00 ATOM 490 C ARG 33 -5.332 40.248 11.194 1.00 0.00 ATOM 491 O ARG 33 -4.229 40.790 11.386 1.00 0.00 ATOM 492 N PRO 34 -5.443 39.210 10.345 1.00 0.00 ATOM 493 CD PRO 34 -6.637 38.435 10.020 1.00 0.00 ATOM 496 CG PRO 34 -6.317 37.713 8.716 1.00 0.00 ATOM 499 CB PRO 34 -4.810 37.513 8.806 1.00 0.00 ATOM 502 CA PRO 34 -4.295 38.726 9.581 1.00 0.00 ATOM 504 C PRO 34 -3.692 39.810 8.671 1.00 0.00 ATOM 505 O PRO 34 -2.544 39.683 8.261 1.00 0.00 ATOM 506 N PHE 35 -4.413 40.913 8.412 1.00 0.00 ATOM 508 CA PHE 35 -3.867 42.137 7.814 1.00 0.00 ATOM 510 CB PHE 35 -5.012 43.145 7.625 1.00 0.00 ATOM 513 CG PHE 35 -4.725 44.227 6.599 1.00 0.00 ATOM 514 CD1 PHE 35 -5.162 44.067 5.269 1.00 0.00 ATOM 516 CE1 PHE 35 -4.912 45.071 4.316 1.00 0.00 ATOM 518 CZ PHE 35 -4.218 46.236 4.687 1.00 0.00 ATOM 520 CE2 PHE 35 -3.775 46.396 6.012 1.00 0.00 ATOM 522 CD2 PHE 35 -4.031 45.396 6.966 1.00 0.00 ATOM 524 C PHE 35 -2.699 42.761 8.617 1.00 0.00 ATOM 525 O PHE 35 -1.712 43.223 8.041 1.00 0.00 ATOM 526 N TRP 36 -2.755 42.728 9.955 1.00 0.00 ATOM 528 CA TRP 36 -1.672 43.203 10.823 1.00 0.00 ATOM 530 CB TRP 36 -2.132 43.245 12.285 1.00 0.00 ATOM 533 CG TRP 36 -3.261 44.161 12.666 1.00 0.00 ATOM 534 CD1 TRP 36 -3.993 44.004 13.791 1.00 0.00 ATOM 536 NE1 TRP 36 -4.890 45.040 13.927 1.00 0.00 ATOM 538 CE2 TRP 36 -4.831 45.899 12.852 1.00 0.00 ATOM 539 CZ2 TRP 36 -5.550 47.058 12.526 1.00 0.00 ATOM 541 CH2 TRP 36 -5.244 47.737 11.335 1.00 0.00 ATOM 543 CZ3 TRP 36 -4.221 47.257 10.500 1.00 0.00 ATOM 545 CE3 TRP 36 -3.499 46.098 10.841 1.00 0.00 ATOM 547 CD2 TRP 36 -3.786 45.374 12.024 1.00 0.00 ATOM 548 C TRP 36 -0.428 42.326 10.689 1.00 0.00 ATOM 549 O TRP 36 0.671 42.859 10.488 1.00 0.00 ATOM 550 N ILE 37 -0.585 40.992 10.708 1.00 0.00 ATOM 552 CA ILE 37 0.620 40.155 10.467 1.00 0.00 ATOM 554 CB ILE 37 0.432 38.671 10.803 1.00 0.00 ATOM 556 CG2 ILE 37 1.739 37.903 10.538 1.00 0.00 ATOM 560 CG1 ILE 37 0.037 38.466 12.270 1.00 0.00 ATOM 563 CD1 ILE 37 0.970 39.121 13.297 1.00 0.00 ATOM 567 C ILE 37 1.167 40.332 9.037 1.00 0.00 ATOM 568 O ILE 37 2.377 40.423 8.850 1.00 0.00 ATOM 569 N SER 38 0.293 40.481 8.041 1.00 0.00 ATOM 571 CA SER 38 0.631 40.843 6.652 1.00 0.00 ATOM 573 CB SER 38 -0.625 40.765 5.772 1.00 0.00 ATOM 576 OG SER 38 -1.263 39.510 5.875 1.00 0.00 ATOM 578 C SER 38 1.208 42.266 6.486 1.00 0.00 ATOM 579 O SER 38 1.577 42.691 5.385 1.00 0.00 ATOM 580 N SER 39 1.251 43.054 7.561 1.00 0.00 ATOM 582 CA SER 39 1.976 44.323 7.620 1.00 0.00 ATOM 584 CB SER 39 1.197 45.345 8.458 1.00 0.00 ATOM 587 OG SER 39 -0.107 45.537 7.943 1.00 0.00 ATOM 589 C SER 39 3.386 44.118 8.197 1.00 0.00 ATOM 590 O SER 39 4.387 44.547 7.607 1.00 0.00 ATOM 591 N PHE 40 3.480 43.440 9.347 1.00 0.00 ATOM 593 CA PHE 40 4.780 43.200 9.984 1.00 0.00 ATOM 595 CB PHE 40 4.588 42.681 11.421 1.00 0.00 ATOM 598 CG PHE 40 4.306 43.774 12.455 1.00 0.00 ATOM 599 CD1 PHE 40 3.201 44.640 12.326 1.00 0.00 ATOM 601 CE1 PHE 40 2.958 45.642 13.286 1.00 0.00 ATOM 603 CZ PHE 40 3.797 45.766 14.408 1.00 0.00 ATOM 605 CE2 PHE 40 4.891 44.897 14.555 1.00 0.00 ATOM 607 CD2 PHE 40 5.148 43.919 13.578 1.00 0.00 ATOM 609 C PHE 40 5.694 42.324 9.094 1.00 0.00 ATOM 610 O PHE 40 6.705 42.791 8.548 1.00 0.00 ATOM 611 N ILE 41 5.267 41.102 8.785 1.00 0.00 ATOM 613 CA ILE 41 5.828 40.435 7.615 1.00 0.00 ATOM 615 CB ILE 41 5.356 38.984 7.436 1.00 0.00 ATOM 617 CG2 ILE 41 6.366 38.323 6.457 1.00 0.00 ATOM 621 CG1 ILE 41 5.119 38.207 8.761 1.00 0.00 ATOM 624 CD1 ILE 41 6.373 37.829 9.546 1.00 0.00 ATOM 628 C ILE 41 5.438 41.252 6.378 1.00 0.00 ATOM 629 O ILE 41 4.321 41.746 6.247 1.00 0.00 ATOM 630 N GLY 42 6.398 41.449 5.495 1.00 0.00 ATOM 632 CA GLY 42 6.318 42.346 4.367 1.00 0.00 ATOM 635 C GLY 42 6.938 43.712 4.629 1.00 0.00 ATOM 636 O GLY 42 7.441 44.269 3.655 1.00 0.00 ATOM 637 N ARG 43 6.962 44.253 5.869 1.00 0.00 ATOM 639 CA ARG 43 7.732 45.490 6.133 1.00 0.00 ATOM 641 CB ARG 43 6.864 46.607 6.769 1.00 0.00 ATOM 644 CG ARG 43 5.550 47.093 6.097 1.00 0.00 ATOM 647 CD ARG 43 5.316 46.858 4.591 1.00 0.00 ATOM 650 NE ARG 43 3.890 46.597 4.261 1.00 0.00 ATOM 652 CZ ARG 43 3.261 45.432 4.351 1.00 0.00 ATOM 653 NH1 ARG 43 2.033 45.270 3.957 1.00 0.00 ATOM 656 NH2 ARG 43 3.801 44.385 4.881 1.00 0.00 ATOM 659 C ARG 43 9.009 45.216 6.937 1.00 0.00 ATOM 660 O ARG 43 8.950 45.202 8.155 1.00 0.00 ATOM 661 N SER 44 10.142 45.071 6.241 1.00 0.00 ATOM 663 CA SER 44 11.546 44.917 6.705 1.00 0.00 ATOM 665 CB SER 44 12.405 44.760 5.445 1.00 0.00 ATOM 668 OG SER 44 12.290 45.882 4.596 1.00 0.00 ATOM 670 C SER 44 12.088 46.087 7.586 1.00 0.00 ATOM 671 O SER 44 13.181 46.585 7.325 1.00 0.00 ATOM 672 N LYS 45 11.304 46.607 8.546 1.00 0.00 ATOM 674 CA LYS 45 11.381 47.987 9.102 1.00 0.00 ATOM 676 CB LYS 45 10.501 48.128 10.356 1.00 0.00 ATOM 679 CG LYS 45 8.990 47.939 10.210 1.00 0.00 ATOM 682 CD LYS 45 8.370 47.911 11.615 1.00 0.00 ATOM 685 CE LYS 45 6.937 47.375 11.576 1.00 0.00 ATOM 688 NZ LYS 45 6.476 47.038 12.943 1.00 0.00 ATOM 692 C LYS 45 12.763 48.542 9.475 1.00 0.00 ATOM 693 O LYS 45 13.169 49.592 8.984 1.00 0.00 TER END