####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS224_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS224_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 18 - 39 4.95 15.11 LCS_AVERAGE: 43.08 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 21 - 29 1.95 17.69 LCS_AVERAGE: 15.70 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 20 - 26 0.62 19.92 LCS_AVERAGE: 10.18 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 11 3 3 4 4 5 6 7 9 10 11 12 12 15 18 21 21 21 25 27 29 LCS_GDT V 3 V 3 4 6 11 3 3 4 5 5 6 7 8 10 10 10 10 14 15 17 18 19 22 26 29 LCS_GDT Q 4 Q 4 4 6 11 3 3 4 5 5 6 7 9 10 11 12 12 15 20 21 24 26 28 28 31 LCS_GDT G 5 G 5 4 6 13 3 3 4 5 5 6 7 9 11 14 16 18 22 22 24 25 26 29 29 31 LCS_GDT P 6 P 6 4 6 17 3 3 5 5 5 8 10 11 13 15 19 21 23 23 24 25 26 29 29 31 LCS_GDT W 7 W 7 4 6 17 3 3 5 5 6 8 10 11 15 17 20 21 23 23 24 26 26 29 29 31 LCS_GDT V 8 V 8 4 5 17 3 3 5 5 5 8 12 15 17 19 20 21 23 23 24 26 26 29 29 32 LCS_GDT G 9 G 9 4 5 17 3 4 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT S 10 S 10 4 5 17 3 4 5 5 5 7 9 11 11 16 18 21 23 23 24 26 26 29 30 32 LCS_GDT S 11 S 11 4 5 17 3 4 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT Y 12 Y 12 4 6 17 3 4 4 4 5 7 9 10 15 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT V 13 V 13 5 6 17 4 4 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT A 14 A 14 5 6 17 4 4 5 5 6 7 10 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT E 15 E 15 5 6 17 4 4 5 5 6 7 9 10 11 13 16 16 21 23 24 26 26 29 29 32 LCS_GDT T 16 T 16 5 6 17 4 4 5 5 6 7 9 12 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT G 17 G 17 5 6 21 3 3 5 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT Q 18 Q 18 4 6 22 3 4 4 6 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT N 19 N 19 4 5 22 3 4 4 6 6 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT W 20 W 20 7 8 22 5 7 7 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 29 32 LCS_GDT A 21 A 21 7 9 22 5 7 7 7 9 11 15 15 17 19 20 21 23 23 24 26 26 29 29 31 LCS_GDT S 22 S 22 7 9 22 5 7 7 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT L 23 L 23 7 9 22 5 7 7 7 9 12 15 15 17 18 19 20 21 23 24 26 26 29 30 32 LCS_GDT A 24 A 24 7 9 22 5 7 7 7 9 12 15 15 17 18 19 20 20 20 22 26 26 29 30 32 LCS_GDT A 25 A 25 7 9 22 5 7 7 7 9 10 15 15 17 18 19 20 20 20 22 26 26 29 30 32 LCS_GDT N 26 N 26 7 9 22 5 7 7 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT E 27 E 27 4 9 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT L 28 L 28 4 9 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT R 29 R 29 4 9 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT V 30 V 30 4 7 22 3 4 4 5 6 9 13 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT T 31 T 31 4 7 22 3 4 4 6 8 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT E 32 E 32 4 7 22 3 4 4 7 9 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT R 33 R 33 3 7 22 3 3 4 5 7 9 13 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT P 34 P 34 3 7 22 3 3 4 6 8 12 15 15 17 18 19 20 20 20 21 22 24 28 30 32 LCS_GDT F 35 F 35 4 7 22 1 4 4 6 8 12 15 15 17 18 20 21 21 23 24 26 26 29 30 32 LCS_GDT W 36 W 36 4 7 22 3 4 4 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT I 37 I 37 4 7 22 3 4 6 6 7 7 10 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT S 38 S 38 4 7 22 3 4 4 6 7 8 10 11 15 18 20 21 23 23 24 26 26 28 30 32 LCS_GDT S 39 S 39 3 7 22 1 3 4 5 7 8 10 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT F 40 F 40 3 7 16 3 3 4 6 7 9 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT I 41 I 41 4 7 16 4 4 6 7 8 10 12 15 17 19 20 21 23 23 24 26 26 29 30 32 LCS_GDT G 42 G 42 4 7 16 4 4 6 6 8 10 12 15 17 19 20 21 23 23 24 26 26 29 29 31 LCS_GDT R 43 R 43 4 7 16 4 4 6 6 6 7 8 11 11 14 16 18 22 22 23 25 26 29 29 31 LCS_GDT S 44 S 44 4 7 16 4 4 6 6 6 7 8 11 11 14 14 16 18 20 21 24 26 28 28 30 LCS_GDT K 45 K 45 3 7 16 3 3 6 6 7 7 9 10 10 12 13 14 15 20 21 21 23 25 26 29 LCS_AVERAGE LCS_A: 22.99 ( 10.18 15.70 43.08 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 7 7 9 12 15 15 17 19 20 21 23 23 24 26 26 29 30 32 GDT PERCENT_AT 11.36 15.91 15.91 15.91 20.45 27.27 34.09 34.09 38.64 43.18 45.45 47.73 52.27 52.27 54.55 59.09 59.09 65.91 68.18 72.73 GDT RMS_LOCAL 0.35 0.62 0.62 0.62 1.85 2.39 2.63 2.63 2.94 3.72 3.89 4.05 4.44 4.39 4.69 5.16 5.10 6.14 7.44 7.58 GDT RMS_ALL_AT 19.81 19.92 19.92 19.92 15.91 16.83 16.83 16.83 16.77 12.11 11.86 11.88 12.57 12.57 12.01 11.99 12.37 11.40 12.16 12.08 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 27.626 0 0.176 0.215 30.069 0.000 0.000 - LGA V 3 V 3 23.475 0 0.086 1.149 24.347 0.000 0.000 22.157 LGA Q 4 Q 4 22.023 0 0.273 0.630 28.101 0.000 0.000 28.101 LGA G 5 G 5 19.667 0 0.109 0.109 21.113 0.000 0.000 - LGA P 6 P 6 18.817 0 0.698 0.628 21.258 0.000 0.000 20.409 LGA W 7 W 7 19.973 0 0.267 1.157 25.979 0.000 0.000 22.879 LGA V 8 V 8 18.193 0 0.614 0.992 19.352 0.000 0.000 15.219 LGA G 9 G 9 19.582 0 0.551 0.551 21.806 0.000 0.000 - LGA S 10 S 10 24.309 0 0.038 0.212 26.638 0.000 0.000 25.038 LGA S 11 S 11 25.306 0 0.618 0.870 26.930 0.000 0.000 26.930 LGA Y 12 Y 12 21.590 0 0.444 1.297 23.028 0.000 0.000 20.994 LGA V 13 V 13 19.621 0 0.347 0.955 20.210 0.000 0.000 18.564 LGA A 14 A 14 21.117 0 0.195 0.200 22.964 0.000 0.000 - LGA E 15 E 15 22.710 0 0.103 1.366 29.591 0.000 0.000 29.042 LGA T 16 T 16 19.160 0 0.280 0.948 21.043 0.000 0.000 18.692 LGA G 17 G 17 18.038 0 0.439 0.439 18.545 0.000 0.000 - LGA Q 18 Q 18 12.403 0 0.682 1.324 17.737 0.000 0.000 16.782 LGA N 19 N 19 7.961 0 0.249 0.339 13.478 0.000 0.000 13.478 LGA W 20 W 20 2.309 0 0.584 1.206 8.625 27.273 18.052 8.625 LGA A 21 A 21 3.329 0 0.052 0.057 4.098 21.364 18.182 - LGA S 22 S 22 2.911 0 0.050 0.676 4.675 32.727 25.152 4.675 LGA L 23 L 23 0.896 0 0.099 1.229 2.984 69.545 60.909 2.984 LGA A 24 A 24 2.514 0 0.088 0.088 3.455 34.545 31.273 - LGA A 25 A 25 3.211 0 0.324 0.316 3.927 27.727 24.364 - LGA N 26 N 26 2.082 0 0.217 1.183 6.674 53.182 31.364 6.674 LGA E 27 E 27 2.121 0 0.145 0.790 6.920 38.636 19.394 6.887 LGA L 28 L 28 2.361 0 0.383 0.466 4.875 34.545 30.909 1.794 LGA R 29 R 29 1.920 0 0.442 1.657 7.398 41.364 23.636 6.404 LGA V 30 V 30 4.758 0 0.187 1.201 9.203 4.545 2.597 8.639 LGA T 31 T 31 3.123 0 0.749 0.587 3.902 33.636 34.026 1.348 LGA E 32 E 32 2.960 0 0.337 0.852 9.891 12.273 5.455 9.570 LGA R 33 R 33 5.006 0 0.163 1.522 15.661 8.636 3.140 15.661 LGA P 34 P 34 3.340 0 0.239 0.463 3.867 16.364 16.364 3.867 LGA F 35 F 35 2.594 0 0.593 1.179 10.805 30.909 12.231 10.496 LGA W 36 W 36 2.582 0 0.269 0.235 12.356 25.909 7.403 12.186 LGA I 37 I 37 6.499 0 0.188 1.624 10.442 2.727 1.364 8.855 LGA S 38 S 38 10.428 0 0.207 0.215 14.795 0.000 0.000 10.348 LGA S 39 S 39 15.181 0 0.283 0.417 18.629 0.000 0.000 13.632 LGA F 40 F 40 18.353 0 0.476 1.476 20.414 0.000 0.000 13.953 LGA I 41 I 41 20.194 0 0.555 1.081 22.073 0.000 0.000 20.006 LGA G 42 G 42 26.315 0 0.195 0.195 27.696 0.000 0.000 - LGA R 43 R 43 25.771 0 0.166 1.360 28.483 0.000 0.000 19.139 LGA S 44 S 44 31.722 0 0.162 0.633 35.798 0.000 0.000 35.798 LGA K 45 K 45 34.851 0 0.679 0.866 38.836 0.000 0.000 38.836 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.183 10.081 11.485 11.725 8.314 4.468 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.63 31.250 28.337 0.550 LGA_LOCAL RMSD: 2.626 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.829 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.183 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.008473 * X + 0.430032 * Y + 0.902774 * Z + -10.413462 Y_new = -0.601976 * X + -0.723082 * Y + 0.338787 * Z + 61.849850 Z_new = 0.798469 * X + -0.540578 * Y + 0.264995 * Z + -14.422623 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.584870 -0.924748 -1.115013 [DEG: -90.8064 -52.9842 -63.8856 ] ZXZ: 1.929807 1.302597 2.165931 [DEG: 110.5698 74.6333 124.0987 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS224_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS224_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.63 28.337 10.18 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS224_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 REFINED PARENT N/A ATOM 12 N ALA 2 -12.665 52.195 19.358 1.00 93.94 ATOM 14 CA ALA 2 -11.513 52.117 18.454 1.00 93.94 ATOM 15 CB ALA 2 -11.454 53.343 17.539 1.00 93.94 ATOM 16 C ALA 2 -10.194 51.946 19.232 1.00 93.94 ATOM 17 O ALA 2 -9.782 52.831 19.996 1.00 93.94 ATOM 18 N VAL 3 -9.582 50.768 19.046 1.00 97.83 ATOM 20 CA VAL 3 -8.303 50.340 19.654 1.00 97.83 ATOM 21 CB VAL 3 -8.509 49.147 20.715 1.00 97.83 ATOM 22 CG1 VAL 3 -9.375 47.996 20.148 1.00 97.83 ATOM 23 CG2 VAL 3 -7.171 48.640 21.281 1.00 97.83 ATOM 24 C VAL 3 -7.371 49.964 18.464 1.00 97.83 ATOM 25 O VAL 3 -7.870 49.477 17.441 1.00 97.83 ATOM 26 N GLN 4 -6.053 50.199 18.596 1.00 97.98 ATOM 28 CA GLN 4 -5.079 49.928 17.513 1.00 97.98 ATOM 29 CB GLN 4 -4.364 51.226 17.110 1.00 97.98 ATOM 30 CG GLN 4 -5.249 52.222 16.373 1.00 97.98 ATOM 31 CD GLN 4 -4.521 53.509 16.031 1.00 97.98 ATOM 32 OE1 GLN 4 -4.555 54.475 16.791 1.00 97.98 ATOM 33 NE2 GLN 4 -3.855 53.526 14.880 1.00 97.98 ATOM 36 C GLN 4 -4.063 48.764 17.565 1.00 97.98 ATOM 37 O GLN 4 -3.056 48.824 18.285 1.00 97.98 ATOM 38 N GLY 5 -4.408 47.681 16.855 1.00 99.12 ATOM 40 CA GLY 5 -3.589 46.473 16.739 1.00 99.12 ATOM 41 C GLY 5 -3.952 45.665 15.507 1.00 99.12 ATOM 42 O GLY 5 -4.609 46.221 14.653 1.00 99.12 ATOM 43 N PRO 6 -3.486 44.397 15.327 1.00 91.98 ATOM 44 CD PRO 6 -2.455 43.659 16.088 1.00 91.98 ATOM 45 CA PRO 6 -3.860 43.620 14.133 1.00 91.98 ATOM 46 CB PRO 6 -3.100 42.314 14.327 1.00 91.98 ATOM 47 CG PRO 6 -1.902 42.735 15.039 1.00 91.98 ATOM 48 C PRO 6 -5.366 43.339 14.097 1.00 91.98 ATOM 49 O PRO 6 -6.025 43.382 15.138 1.00 91.98 ATOM 50 N TRP 7 -5.861 42.926 12.932 1.00 93.35 ATOM 52 CA TRP 7 -7.278 42.661 12.720 1.00 93.35 ATOM 53 CB TRP 7 -7.564 42.705 11.212 1.00 93.35 ATOM 54 CG TRP 7 -8.979 42.389 10.789 1.00 93.35 ATOM 55 CD2 TRP 7 -9.488 41.123 10.308 1.00 93.35 ATOM 56 CE2 TRP 7 -10.860 41.321 9.987 1.00 93.35 ATOM 57 CE3 TRP 7 -8.920 39.842 10.119 1.00 93.35 ATOM 58 CD1 TRP 7 -10.042 43.266 10.733 1.00 93.35 ATOM 59 NE1 TRP 7 -11.162 42.629 10.256 1.00 93.35 ATOM 61 CZ2 TRP 7 -11.679 40.284 9.484 1.00 93.35 ATOM 62 CZ3 TRP 7 -9.740 38.802 9.615 1.00 93.35 ATOM 63 CH2 TRP 7 -11.107 39.038 9.305 1.00 93.35 ATOM 64 C TRP 7 -7.728 41.324 13.310 1.00 93.35 ATOM 65 O TRP 7 -7.253 40.258 12.896 1.00 93.35 ATOM 66 N VAL 8 -8.578 41.409 14.344 1.00 97.68 ATOM 68 CA VAL 8 -9.121 40.214 15.001 1.00 97.68 ATOM 69 CB VAL 8 -8.365 39.775 16.303 1.00 97.68 ATOM 70 CG1 VAL 8 -7.852 38.365 16.101 1.00 97.68 ATOM 71 CG2 VAL 8 -7.179 40.699 16.612 1.00 97.68 ATOM 72 C VAL 8 -10.622 40.180 15.215 1.00 97.68 ATOM 73 O VAL 8 -11.253 41.159 15.623 1.00 97.68 ATOM 74 N GLY 9 -11.160 39.018 14.855 1.00 92.78 ATOM 76 CA GLY 9 -12.568 38.664 14.927 1.00 92.78 ATOM 77 C GLY 9 -13.657 39.650 14.568 1.00 92.78 ATOM 78 O GLY 9 -14.201 40.301 15.469 1.00 92.78 ATOM 79 N SER 10 -14.010 39.729 13.277 1.00 95.54 ATOM 81 CA SER 10 -15.082 40.650 12.879 1.00 95.54 ATOM 82 CB SER 10 -14.610 41.498 11.697 1.00 95.54 ATOM 83 OG SER 10 -14.598 40.726 10.504 1.00 95.54 ATOM 85 C SER 10 -16.345 39.928 12.425 1.00 95.54 ATOM 86 O SER 10 -17.465 40.414 12.622 1.00 95.54 ATOM 87 N SER 11 -16.117 38.756 11.833 1.00 94.77 ATOM 89 CA SER 11 -17.127 37.827 11.339 1.00 94.77 ATOM 90 OG SER 11 -17.824 39.073 9.398 1.00 94.77 ATOM 92 C SER 11 -16.620 36.522 11.914 1.00 94.77 ATOM 93 O SER 11 -15.685 35.925 11.364 1.00 94.77 ATOM 94 CB SER 11 -17.229 37.854 9.810 1.00 94.77 ATOM 95 N TYR 12 -17.236 36.089 13.014 1.00 96.29 ATOM 97 CA TYR 12 -16.840 34.902 13.781 1.00 96.29 ATOM 98 CB TYR 12 -17.689 34.793 15.064 1.00 96.29 ATOM 99 CG TYR 12 -17.748 36.028 15.966 1.00 96.29 ATOM 100 CD1 TYR 12 -18.758 37.008 15.801 1.00 96.29 ATOM 101 CE1 TYR 12 -18.838 38.139 16.661 1.00 96.29 ATOM 102 CD2 TYR 12 -16.816 36.210 17.019 1.00 96.29 ATOM 103 CE2 TYR 12 -16.888 37.338 17.883 1.00 96.29 ATOM 104 CZ TYR 12 -17.900 38.293 17.695 1.00 96.29 ATOM 105 OH TYR 12 -17.971 39.385 18.530 1.00 96.29 ATOM 107 C TYR 12 -16.906 33.605 12.970 1.00 96.29 ATOM 108 O TYR 12 -17.641 32.654 13.283 1.00 96.29 ATOM 109 N VAL 13 -16.109 33.632 11.893 1.00 93.65 ATOM 111 CA VAL 13 -15.914 32.539 10.943 1.00 93.65 ATOM 112 CB VAL 13 -15.608 33.110 9.488 1.00 93.65 ATOM 113 CG1 VAL 13 -14.255 33.820 9.422 1.00 93.65 ATOM 114 CG2 VAL 13 -15.734 32.016 8.418 1.00 93.65 ATOM 115 C VAL 13 -14.770 31.695 11.575 1.00 93.65 ATOM 116 O VAL 13 -14.036 30.967 10.880 1.00 93.65 ATOM 117 N ALA 14 -14.787 31.678 12.922 1.00 95.13 ATOM 119 CA ALA 14 -13.822 30.971 13.773 1.00 95.13 ATOM 120 CB ALA 14 -14.002 31.377 15.218 1.00 95.13 ATOM 121 C ALA 14 -14.058 29.482 13.650 1.00 95.13 ATOM 122 O ALA 14 -13.340 28.654 14.235 1.00 95.13 ATOM 123 N GLU 15 -15.054 29.168 12.825 1.00 99.52 ATOM 125 CA GLU 15 -15.456 27.809 12.562 1.00 99.52 ATOM 126 CB GLU 15 -16.984 27.759 12.406 1.00 99.52 ATOM 127 CG GLU 15 -17.763 28.626 13.401 1.00 99.52 ATOM 128 CD GLU 15 -19.265 28.538 13.203 1.00 99.52 ATOM 129 OE1 GLU 15 -19.900 27.661 13.825 1.00 99.52 ATOM 130 OE2 GLU 15 -19.811 29.350 12.425 1.00 99.52 ATOM 131 C GLU 15 -14.787 27.284 11.294 1.00 99.52 ATOM 132 O GLU 15 -14.111 26.249 11.349 1.00 99.52 ATOM 133 N THR 16 -14.950 28.004 10.169 1.00 99.16 ATOM 135 CA THR 16 -14.402 27.524 8.895 1.00 99.16 ATOM 136 CB THR 16 -15.652 27.060 8.041 1.00 99.16 ATOM 137 OG1 THR 16 -15.247 26.610 6.740 1.00 99.16 ATOM 139 CG2 THR 16 -16.693 28.221 7.911 1.00 99.16 ATOM 140 C THR 16 -13.389 28.081 7.859 1.00 99.16 ATOM 141 O THR 16 -12.234 27.642 7.787 1.00 99.16 ATOM 142 N GLY 17 -13.889 29.036 7.065 1.00 96.36 ATOM 144 CA GLY 17 -13.207 29.546 5.885 1.00 96.36 ATOM 145 C GLY 17 -11.826 29.801 5.337 1.00 96.36 ATOM 146 O GLY 17 -11.275 28.879 4.733 1.00 96.36 ATOM 147 N GLN 18 -11.240 30.977 5.549 1.00 97.17 ATOM 149 CA GLN 18 -9.893 31.220 5.031 1.00 97.17 ATOM 150 CB GLN 18 -9.968 32.233 3.873 1.00 97.17 ATOM 151 CG GLN 18 -10.821 33.480 4.142 1.00 97.17 ATOM 152 CD GLN 18 -10.850 34.432 2.963 1.00 97.17 ATOM 153 OE1 GLN 18 -11.726 34.345 2.102 1.00 97.17 ATOM 154 NE2 GLN 18 -9.890 35.350 2.918 1.00 97.17 ATOM 157 C GLN 18 -8.840 31.667 6.004 1.00 97.17 ATOM 158 O GLN 18 -7.649 31.703 5.675 1.00 97.17 ATOM 159 N ASN 19 -9.270 31.942 7.230 1.00 91.42 ATOM 161 CA ASN 19 -8.347 32.503 8.188 1.00 91.42 ATOM 162 CB ASN 19 -8.742 33.950 8.511 1.00 91.42 ATOM 163 CG ASN 19 -8.545 34.887 7.308 1.00 91.42 ATOM 164 OD1 ASN 19 -9.479 35.144 6.547 1.00 91.42 ATOM 165 ND2 ASN 19 -7.331 35.416 7.155 1.00 91.42 ATOM 168 C ASN 19 -7.729 31.735 9.339 1.00 91.42 ATOM 169 O ASN 19 -7.129 32.335 10.236 1.00 91.42 ATOM 170 N TRP 20 -7.710 30.402 9.240 1.00 96.07 ATOM 172 CA TRP 20 -7.088 29.623 10.311 1.00 96.07 ATOM 173 CB TRP 20 -7.660 28.200 10.315 1.00 96.07 ATOM 174 CG TRP 20 -7.539 27.459 11.653 1.00 96.07 ATOM 175 CD2 TRP 20 -8.444 27.515 12.781 1.00 96.07 ATOM 176 CE2 TRP 20 -7.936 26.623 13.769 1.00 96.07 ATOM 177 CE3 TRP 20 -9.632 28.231 13.056 1.00 96.07 ATOM 178 CD1 TRP 20 -6.557 26.558 12.007 1.00 96.07 ATOM 179 NE1 TRP 20 -6.793 26.062 13.265 1.00 96.07 ATOM 181 CZ2 TRP 20 -8.574 26.424 15.018 1.00 96.07 ATOM 182 CZ3 TRP 20 -10.273 28.034 14.305 1.00 96.07 ATOM 183 CH2 TRP 20 -9.736 27.133 15.267 1.00 96.07 ATOM 184 C TRP 20 -5.582 29.628 10.023 1.00 96.07 ATOM 185 O TRP 20 -4.783 29.059 10.776 1.00 96.07 ATOM 186 N ALA 21 -5.229 30.407 8.991 1.00 90.16 ATOM 188 CA ALA 21 -3.855 30.650 8.572 1.00 90.16 ATOM 189 CB ALA 21 -3.847 30.928 7.108 1.00 90.16 ATOM 190 C ALA 21 -3.437 31.904 9.319 1.00 90.16 ATOM 191 O ALA 21 -2.262 32.114 9.603 1.00 90.16 ATOM 192 N SER 22 -4.451 32.696 9.684 1.00 92.43 ATOM 194 CA SER 22 -4.275 33.940 10.425 1.00 92.43 ATOM 195 CB SER 22 -5.365 34.931 10.028 1.00 92.43 ATOM 196 OG SER 22 -5.008 36.249 10.383 1.00 92.43 ATOM 198 C SER 22 -4.240 33.713 11.948 1.00 92.43 ATOM 199 O SER 22 -3.536 34.437 12.658 1.00 92.43 ATOM 200 N LEU 23 -4.876 32.623 12.417 1.00 91.37 ATOM 202 CA LEU 23 -4.915 32.284 13.859 1.00 91.37 ATOM 203 CB LEU 23 -6.105 31.354 14.197 1.00 91.37 ATOM 204 CG LEU 23 -6.509 31.134 15.676 1.00 91.37 ATOM 205 CD1 LEU 23 -8.015 31.313 15.827 1.00 91.37 ATOM 206 CD2 LEU 23 -6.082 29.747 16.181 1.00 91.37 ATOM 207 C LEU 23 -3.591 31.635 14.257 1.00 91.37 ATOM 208 O LEU 23 -3.274 31.523 15.447 1.00 91.37 ATOM 209 N ALA 24 -2.829 31.231 13.239 1.00 98.04 ATOM 211 CA ALA 24 -1.522 30.607 13.414 1.00 98.04 ATOM 212 CB ALA 24 -1.160 29.923 12.145 1.00 98.04 ATOM 213 C ALA 24 -0.512 31.718 13.727 1.00 98.04 ATOM 214 O ALA 24 0.548 31.475 14.309 1.00 98.04 ATOM 215 N ALA 25 -0.922 32.942 13.383 1.00 91.57 ATOM 217 CA ALA 25 -0.203 34.200 13.615 1.00 91.57 ATOM 218 CB ALA 25 -0.460 35.181 12.480 1.00 91.57 ATOM 219 C ALA 25 -0.594 34.783 14.994 1.00 91.57 ATOM 220 O ALA 25 -0.384 35.980 15.258 1.00 91.57 ATOM 221 N ASN 26 -1.066 33.901 15.896 1.00 94.01 ATOM 223 CA ASN 26 -1.575 34.279 17.237 1.00 94.01 ATOM 224 CB ASN 26 -2.325 33.088 17.883 1.00 94.01 ATOM 225 CG ASN 26 -1.394 31.938 18.299 1.00 94.01 ATOM 226 OD1 ASN 26 -0.902 31.899 19.428 1.00 94.01 ATOM 227 ND2 ASN 26 -1.167 30.998 17.386 1.00 94.01 ATOM 230 C ASN 26 -0.527 34.819 18.231 1.00 94.01 ATOM 231 O ASN 26 -0.860 35.148 19.381 1.00 94.01 ATOM 232 N GLU 27 0.710 34.969 17.749 1.00 91.30 ATOM 234 CA GLU 27 1.822 35.481 18.552 1.00 91.30 ATOM 235 CG GLU 27 3.403 34.428 16.737 1.00 91.30 ATOM 236 CD GLU 27 4.703 33.674 16.526 1.00 91.30 ATOM 237 OE1 GLU 27 5.753 34.329 16.359 1.00 91.30 ATOM 238 OE2 GLU 27 4.674 32.425 16.526 1.00 91.30 ATOM 239 C GLU 27 1.999 37.011 18.428 1.00 91.30 ATOM 240 O GLU 27 2.911 37.594 19.026 1.00 91.30 ATOM 241 CB GLU 27 3.120 34.717 18.218 1.00 91.30 ATOM 242 N LEU 28 1.092 37.633 17.666 1.00 91.09 ATOM 244 CA LEU 28 1.045 39.086 17.442 1.00 91.09 ATOM 245 CB LEU 28 1.138 39.415 15.937 1.00 91.09 ATOM 246 CG LEU 28 2.517 39.323 15.250 1.00 91.09 ATOM 247 CD1 LEU 28 2.411 38.463 13.992 1.00 91.09 ATOM 248 CD2 LEU 28 3.061 40.714 14.896 1.00 91.09 ATOM 249 C LEU 28 -0.234 39.621 18.123 1.00 91.09 ATOM 250 O LEU 28 -1.267 39.832 17.473 1.00 91.09 ATOM 251 N ARG 29 -0.080 39.998 19.399 1.00 99.99 ATOM 253 CA ARG 29 -1.162 40.444 20.310 1.00 99.99 ATOM 254 CB ARG 29 -0.570 41.274 21.447 1.00 99.99 ATOM 255 CG ARG 29 0.309 40.471 22.389 1.00 99.99 ATOM 256 CD ARG 29 0.873 41.345 23.501 1.00 99.99 ATOM 257 NE ARG 29 1.725 40.585 24.419 1.00 99.99 ATOM 259 CZ ARG 29 2.351 41.091 25.482 1.00 99.99 ATOM 260 NH1 ARG 29 2.241 42.378 25.799 1.00 99.99 ATOM 263 NH2 ARG 29 3.097 40.298 26.240 1.00 99.99 ATOM 266 C ARG 29 -2.446 41.114 19.785 1.00 99.99 ATOM 267 O ARG 29 -2.404 42.021 18.943 1.00 99.99 ATOM 268 N VAL 30 -3.567 40.661 20.366 1.00 92.18 ATOM 270 CA VAL 30 -4.944 41.055 20.022 1.00 92.18 ATOM 271 CB VAL 30 -5.949 39.844 20.307 1.00 92.18 ATOM 272 CG1 VAL 30 -5.820 39.355 21.750 1.00 92.18 ATOM 273 CG2 VAL 30 -7.415 40.200 20.007 1.00 92.18 ATOM 274 C VAL 30 -5.485 42.398 20.569 1.00 92.18 ATOM 275 O VAL 30 -5.991 42.495 21.694 1.00 92.18 ATOM 276 N THR 31 -5.235 43.431 19.762 1.00 95.13 ATOM 278 CA THR 31 -5.698 44.816 19.922 1.00 95.13 ATOM 279 CB THR 31 -4.517 45.796 20.142 1.00 95.13 ATOM 280 OG1 THR 31 -3.364 45.328 19.432 1.00 95.13 ATOM 282 CG2 THR 31 -4.170 45.867 21.609 1.00 95.13 ATOM 283 C THR 31 -6.363 44.936 18.538 1.00 95.13 ATOM 284 O THR 31 -5.773 44.485 17.552 1.00 95.13 ATOM 285 N GLU 32 -7.589 45.458 18.436 1.00 98.39 ATOM 287 CA GLU 32 -8.237 45.451 17.117 1.00 98.39 ATOM 288 CB GLU 32 -9.621 44.781 17.240 1.00 98.39 ATOM 289 CG GLU 32 -9.600 43.283 17.502 1.00 98.39 ATOM 290 CD GLU 32 -10.840 42.800 18.243 1.00 98.39 ATOM 291 OE1 GLU 32 -10.730 42.515 19.454 1.00 98.39 ATOM 292 OE2 GLU 32 -11.922 42.705 17.623 1.00 98.39 ATOM 293 C GLU 32 -8.354 46.672 16.190 1.00 98.39 ATOM 294 O GLU 32 -9.394 47.338 16.155 1.00 98.39 ATOM 295 N ARG 33 -7.250 46.991 15.498 1.00 96.13 ATOM 297 CA ARG 33 -7.218 47.994 14.418 1.00 96.13 ATOM 298 CB ARG 33 -6.124 49.073 14.534 1.00 96.13 ATOM 299 CG ARG 33 -4.760 48.834 13.841 1.00 96.13 ATOM 300 CD ARG 33 -3.999 50.121 13.544 1.00 96.13 ATOM 301 NE ARG 33 -4.634 50.926 12.494 1.00 96.13 ATOM 303 CZ ARG 33 -4.135 52.049 11.977 1.00 96.13 ATOM 304 NH1 ARG 33 -2.974 52.543 12.396 1.00 96.13 ATOM 307 NH2 ARG 33 -4.808 52.686 11.029 1.00 96.13 ATOM 310 C ARG 33 -6.943 47.055 13.238 1.00 96.13 ATOM 311 O ARG 33 -6.319 46.020 13.439 1.00 96.13 ATOM 312 N PRO 34 -7.424 47.345 12.023 1.00 92.96 ATOM 313 CD PRO 34 -8.550 48.149 11.495 1.00 92.96 ATOM 314 CA PRO 34 -7.022 46.301 11.062 1.00 92.96 ATOM 315 CB PRO 34 -8.167 46.338 10.049 1.00 92.96 ATOM 316 CG PRO 34 -8.572 47.770 10.052 1.00 92.96 ATOM 317 C PRO 34 -5.604 46.293 10.398 1.00 92.96 ATOM 318 O PRO 34 -5.294 47.216 9.634 1.00 92.96 ATOM 319 N PHE 35 -4.741 45.311 10.736 1.00 96.38 ATOM 321 CA PHE 35 -3.416 45.216 10.083 1.00 96.38 ATOM 322 CB PHE 35 -2.288 45.384 11.141 1.00 96.38 ATOM 323 CG PHE 35 -0.915 45.760 10.576 1.00 96.38 ATOM 324 CD1 PHE 35 -0.610 47.101 10.232 1.00 96.38 ATOM 325 CD2 PHE 35 0.098 44.782 10.431 1.00 96.38 ATOM 326 CE1 PHE 35 0.679 47.462 9.751 1.00 96.38 ATOM 327 CE2 PHE 35 1.392 45.128 9.951 1.00 96.38 ATOM 328 CZ PHE 35 1.682 46.472 9.611 1.00 96.38 ATOM 329 C PHE 35 -3.292 43.867 9.313 1.00 96.38 ATOM 330 O PHE 35 -2.191 43.359 9.052 1.00 96.38 ATOM 331 N TRP 36 -4.460 43.362 8.896 1.00 95.24 ATOM 333 CA TRP 36 -4.676 42.192 8.019 1.00 95.24 ATOM 334 CB TRP 36 -5.454 41.055 8.718 1.00 95.24 ATOM 335 CG TRP 36 -4.654 40.257 9.755 1.00 95.24 ATOM 336 CD2 TRP 36 -3.716 39.185 9.507 1.00 95.24 ATOM 337 CE2 TRP 36 -3.229 38.757 10.773 1.00 95.24 ATOM 338 CE3 TRP 36 -3.237 38.546 8.339 1.00 95.24 ATOM 339 CD1 TRP 36 -4.689 40.416 11.121 1.00 95.24 ATOM 340 NE1 TRP 36 -3.840 39.525 11.728 1.00 95.24 ATOM 342 CZ2 TRP 36 -2.283 37.717 10.910 1.00 95.24 ATOM 343 CZ3 TRP 36 -2.290 37.503 8.475 1.00 95.24 ATOM 344 CH2 TRP 36 -1.826 37.104 9.758 1.00 95.24 ATOM 345 C TRP 36 -5.509 42.925 6.951 1.00 95.24 ATOM 346 O TRP 36 -6.722 42.702 6.808 1.00 95.24 ATOM 347 N ILE 37 -4.806 43.741 6.167 1.00 94.94 ATOM 349 CA ILE 37 -5.360 44.663 5.158 1.00 94.94 ATOM 350 CB ILE 37 -4.213 45.611 4.633 1.00 94.94 ATOM 351 CG2 ILE 37 -4.171 46.884 5.493 1.00 94.94 ATOM 352 CG1 ILE 37 -2.855 44.875 4.623 1.00 94.94 ATOM 353 CD1 ILE 37 -1.906 45.271 3.482 1.00 94.94 ATOM 354 C ILE 37 -6.198 44.162 3.957 1.00 94.94 ATOM 355 O ILE 37 -6.565 44.971 3.087 1.00 94.94 ATOM 356 N SER 38 -6.560 42.874 3.934 1.00 99.73 ATOM 358 CA SER 38 -7.297 42.357 2.778 1.00 99.73 ATOM 359 CB SER 38 -6.824 40.929 2.506 1.00 99.73 ATOM 360 OG SER 38 -7.164 40.071 3.582 1.00 99.73 ATOM 362 C SER 38 -8.812 42.381 2.502 1.00 99.73 ATOM 363 O SER 38 -9.191 42.949 1.472 1.00 99.73 ATOM 364 N SER 39 -9.679 41.836 3.372 1.00 92.93 ATOM 366 CA SER 39 -11.104 41.805 2.990 1.00 92.93 ATOM 367 CB SER 39 -11.523 40.332 3.017 1.00 92.93 ATOM 368 OG SER 39 -11.166 39.754 4.265 1.00 92.93 ATOM 370 C SER 39 -12.313 42.617 3.493 1.00 92.93 ATOM 371 O SER 39 -12.855 43.434 2.742 1.00 92.93 ATOM 372 N PHE 40 -12.697 42.414 4.759 1.00 97.71 ATOM 374 CA PHE 40 -13.857 43.060 5.399 1.00 97.71 ATOM 375 CB PHE 40 -15.056 42.071 5.505 1.00 97.71 ATOM 376 CG PHE 40 -14.694 40.661 5.975 1.00 97.71 ATOM 377 CD1 PHE 40 -14.427 39.636 5.037 1.00 97.71 ATOM 378 CD2 PHE 40 -14.688 40.330 7.351 1.00 97.71 ATOM 379 CE1 PHE 40 -14.158 38.305 5.455 1.00 97.71 ATOM 380 CE2 PHE 40 -14.422 39.001 7.784 1.00 97.71 ATOM 381 CZ PHE 40 -14.157 37.987 6.833 1.00 97.71 ATOM 382 C PHE 40 -13.619 43.841 6.696 1.00 97.71 ATOM 383 O PHE 40 -14.068 43.393 7.767 1.00 97.71 ATOM 384 N ILE 41 -13.062 45.050 6.604 1.00 95.27 ATOM 386 CA ILE 41 -12.732 45.860 7.801 1.00 95.27 ATOM 387 CB ILE 41 -11.784 47.049 7.415 1.00 95.27 ATOM 388 CG2 ILE 41 -10.389 46.507 7.052 1.00 95.27 ATOM 389 CG1 ILE 41 -12.399 47.893 6.279 1.00 95.27 ATOM 390 CD1 ILE 41 -12.100 49.397 6.346 1.00 95.27 ATOM 391 C ILE 41 -13.890 46.387 8.685 1.00 95.27 ATOM 392 O ILE 41 -13.692 47.285 9.521 1.00 95.27 ATOM 393 N GLY 42 -15.063 45.753 8.561 1.00 97.70 ATOM 395 CA GLY 42 -16.260 46.099 9.331 1.00 97.70 ATOM 396 C GLY 42 -16.430 47.520 9.833 1.00 97.70 ATOM 397 O GLY 42 -16.981 47.761 10.911 1.00 97.70 ATOM 398 N ARG 43 -15.814 48.426 9.074 1.00 94.00 ATOM 400 CA ARG 43 -15.823 49.867 9.264 1.00 94.00 ATOM 401 CB ARG 43 -14.443 50.498 9.104 1.00 94.00 ATOM 402 CG ARG 43 -13.649 50.554 10.401 1.00 94.00 ATOM 403 CD ARG 43 -12.320 51.291 10.235 1.00 94.00 ATOM 404 NE ARG 43 -11.371 50.578 9.374 1.00 94.00 ATOM 406 CZ ARG 43 -10.184 51.047 8.985 1.00 94.00 ATOM 407 NH1 ARG 43 -9.413 50.306 8.202 1.00 94.00 ATOM 410 NH2 ARG 43 -9.759 52.248 9.367 1.00 94.00 ATOM 413 C ARG 43 -16.798 50.293 8.192 1.00 94.00 ATOM 414 O ARG 43 -17.324 49.436 7.474 1.00 94.00 ATOM 415 N SER 44 -17.054 51.587 8.076 1.00 98.92 ATOM 417 CA SER 44 -18.072 52.046 7.164 1.00 98.92 ATOM 418 CB SER 44 -18.729 53.275 7.756 1.00 98.92 ATOM 419 OG SER 44 -20.009 53.439 7.188 1.00 98.92 ATOM 421 C SER 44 -17.902 52.227 5.668 1.00 98.92 ATOM 422 O SER 44 -16.802 52.289 5.105 1.00 98.92 ATOM 423 N LYS 45 -19.096 52.394 5.104 1.00 92.83 ATOM 425 CA LYS 45 -19.448 52.522 3.712 1.00 92.83 ATOM 426 CG LYS 45 -21.846 52.218 4.717 1.00 92.83 ATOM 427 CD LYS 45 -23.212 51.611 4.447 1.00 92.83 ATOM 428 CE LYS 45 -24.170 51.876 5.598 1.00 92.83 ATOM 429 NZ LYS 45 -25.515 51.286 5.348 1.00 92.83 ATOM 433 C LYS 45 -19.313 53.874 2.997 1.00 92.83 ATOM 434 O LYS 45 -19.718 53.978 1.844 1.00 92.83 ATOM 435 CB LYS 45 -20.875 51.951 3.552 1.00 92.83 TER END