####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS222_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS222_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 21 - 41 4.96 14.88 LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 4.84 15.07 LCS_AVERAGE: 40.39 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 13 - 21 1.98 23.47 LCS_AVERAGE: 14.72 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.83 17.60 LONGEST_CONTINUOUS_SEGMENT: 5 10 - 14 0.84 27.08 LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.69 26.53 LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.80 23.78 LONGEST_CONTINUOUS_SEGMENT: 5 34 - 38 0.96 17.34 LCS_AVERAGE: 9.45 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 5 8 4 4 5 5 6 8 8 8 12 13 15 20 21 23 24 26 29 30 32 32 LCS_GDT V 3 V 3 5 5 8 4 4 5 5 6 8 10 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT Q 4 Q 4 5 5 8 4 4 5 5 6 8 10 11 12 13 15 19 21 23 24 26 29 30 32 32 LCS_GDT G 5 G 5 5 5 15 4 4 5 5 6 8 8 9 10 12 14 15 18 21 24 26 29 30 32 32 LCS_GDT P 6 P 6 5 5 16 1 3 5 5 6 8 8 8 10 11 12 15 18 21 24 25 29 30 32 32 LCS_GDT W 7 W 7 4 5 16 0 3 4 4 4 5 7 8 10 11 12 15 18 21 24 26 29 30 32 32 LCS_GDT V 8 V 8 4 4 16 3 3 4 4 4 6 7 9 10 12 14 15 18 21 24 26 29 30 32 32 LCS_GDT G 9 G 9 4 6 16 3 3 4 4 5 6 9 11 13 14 14 15 18 21 24 26 29 30 32 32 LCS_GDT S 10 S 10 5 6 16 3 4 5 5 5 7 9 11 13 14 14 15 17 18 20 21 25 27 30 32 LCS_GDT S 11 S 11 5 6 16 3 4 5 5 6 7 10 11 13 14 14 15 15 16 20 21 21 22 24 26 LCS_GDT Y 12 Y 12 5 7 16 3 4 5 5 5 8 10 11 13 14 14 15 15 16 20 21 21 22 23 25 LCS_GDT V 13 V 13 5 9 16 4 5 5 7 7 8 10 11 13 14 14 15 16 17 20 21 21 22 24 26 LCS_GDT A 14 A 14 5 9 16 4 6 6 7 7 8 10 11 13 14 14 15 15 16 20 21 21 22 23 26 LCS_GDT E 15 E 15 5 9 16 4 6 6 7 7 8 10 11 13 14 14 15 15 16 20 21 21 22 22 25 LCS_GDT T 16 T 16 5 9 16 4 6 6 7 7 8 10 11 13 14 14 15 15 17 20 21 21 22 24 26 LCS_GDT G 17 G 17 5 9 16 3 6 6 7 7 8 10 11 13 14 14 15 16 17 20 21 21 22 24 26 LCS_GDT Q 18 Q 18 5 9 16 3 6 6 7 7 8 10 11 13 14 14 15 17 18 20 21 23 26 30 32 LCS_GDT N 19 N 19 4 9 16 4 4 4 7 7 8 10 11 13 14 14 15 18 21 24 26 29 30 32 32 LCS_GDT W 20 W 20 4 9 18 4 6 6 7 7 8 10 11 13 14 15 20 21 23 24 26 29 30 32 32 LCS_GDT A 21 A 21 4 9 21 4 4 4 6 7 8 10 11 13 14 15 20 21 23 24 26 29 30 32 32 LCS_GDT S 22 S 22 4 5 21 4 4 4 5 6 8 10 11 13 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT L 23 L 23 3 3 21 3 3 3 3 4 7 9 9 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT A 24 A 24 3 4 21 3 3 3 5 6 7 10 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT A 25 A 25 3 5 21 3 3 4 4 4 5 6 7 11 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 4 5 5 6 9 12 15 18 20 23 24 25 28 30 32 32 LCS_GDT E 27 E 27 3 6 21 3 3 4 4 6 7 9 9 12 12 16 18 21 23 24 26 29 30 32 32 LCS_GDT L 28 L 28 3 6 21 3 3 4 6 6 7 10 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT R 29 R 29 4 6 21 3 4 4 6 6 7 10 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT V 30 V 30 4 6 21 3 4 4 6 7 9 10 11 12 14 16 20 21 23 24 26 29 30 32 32 LCS_GDT T 31 T 31 4 8 21 3 4 4 6 6 9 10 11 12 14 17 20 21 23 24 25 29 30 32 32 LCS_GDT E 32 E 32 4 8 21 3 4 4 6 7 9 9 9 12 13 16 18 21 22 24 25 26 30 32 32 LCS_GDT R 33 R 33 3 8 21 3 3 5 5 7 9 10 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT P 34 P 34 5 8 21 3 4 5 5 7 9 9 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT F 35 F 35 5 8 21 3 4 5 5 7 9 9 11 12 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT W 36 W 36 5 8 21 3 4 5 5 7 9 9 9 11 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT I 37 I 37 5 8 21 3 4 5 5 7 9 9 9 11 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT S 38 S 38 5 8 21 3 4 5 5 7 9 9 9 11 13 16 18 20 22 23 25 26 28 32 32 LCS_GDT S 39 S 39 4 6 21 3 4 4 5 6 8 9 9 10 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT F 40 F 40 4 6 21 3 4 4 5 6 8 9 9 11 14 17 19 21 23 24 26 29 30 32 32 LCS_GDT I 41 I 41 3 6 21 3 3 3 4 4 6 9 9 11 14 17 20 21 23 24 26 29 30 32 32 LCS_GDT G 42 G 42 3 6 21 3 3 3 4 6 8 9 9 10 14 17 20 21 23 24 25 29 30 32 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 3 4 5 8 9 9 10 12 15 15 16 19 21 22 24 28 31 LCS_GDT S 44 S 44 3 4 13 3 3 3 3 5 7 8 9 10 11 12 15 15 16 19 21 22 24 28 31 LCS_GDT K 45 K 45 3 3 13 0 3 3 3 6 8 8 9 10 11 12 15 15 16 19 21 22 24 28 31 LCS_AVERAGE LCS_A: 21.52 ( 9.45 14.72 40.39 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 6 7 7 9 10 11 13 14 17 20 21 23 24 26 29 30 32 32 GDT PERCENT_AT 9.09 13.64 13.64 15.91 15.91 20.45 22.73 25.00 29.55 31.82 38.64 45.45 47.73 52.27 54.55 59.09 65.91 68.18 72.73 72.73 GDT RMS_LOCAL 0.20 0.74 0.74 1.14 1.14 2.04 2.30 2.57 3.00 3.23 4.20 4.73 4.79 5.04 5.18 6.13 8.66 6.41 6.67 6.67 GDT RMS_ALL_AT 27.72 23.73 23.73 23.96 23.96 15.02 23.57 23.25 22.78 21.84 14.15 12.92 13.04 12.82 12.93 11.31 11.31 11.81 11.58 11.58 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 36.682 0 0.130 0.186 38.898 0.000 0.000 - LGA V 3 V 3 30.526 0 0.096 0.130 32.679 0.000 0.000 27.235 LGA Q 4 Q 4 27.968 0 0.098 1.218 31.206 0.000 0.000 31.206 LGA G 5 G 5 23.476 0 0.275 0.275 25.089 0.000 0.000 - LGA P 6 P 6 18.934 0 0.649 0.546 23.072 0.000 0.000 21.218 LGA W 7 W 7 15.448 0 0.349 0.321 22.324 0.000 0.000 21.291 LGA V 8 V 8 9.950 0 0.665 0.706 11.935 0.000 0.000 6.691 LGA G 9 G 9 5.640 0 0.568 0.568 7.121 4.091 4.091 - LGA S 10 S 10 5.098 0 0.611 0.678 9.277 5.455 3.636 9.277 LGA S 11 S 11 3.735 0 0.042 0.674 7.636 18.636 12.727 7.636 LGA Y 12 Y 12 2.839 0 0.070 1.077 13.410 25.455 9.394 13.410 LGA V 13 V 13 3.947 0 0.534 1.338 8.339 31.818 18.182 8.339 LGA A 14 A 14 1.096 0 0.013 0.017 2.236 58.636 60.000 - LGA E 15 E 15 2.768 0 0.028 1.188 4.045 32.727 27.071 1.565 LGA T 16 T 16 1.179 0 0.147 1.141 3.215 65.909 55.844 2.900 LGA G 17 G 17 1.191 0 0.576 0.576 3.390 54.091 54.091 - LGA Q 18 Q 18 1.917 0 0.231 0.362 8.449 46.364 21.212 6.777 LGA N 19 N 19 3.317 0 0.648 1.287 9.210 42.727 21.364 8.545 LGA W 20 W 20 0.637 0 0.033 0.348 4.892 62.727 30.260 4.787 LGA A 21 A 21 2.836 0 0.594 0.545 6.946 23.636 26.545 - LGA S 22 S 22 6.115 0 0.620 0.688 7.981 1.364 1.212 4.574 LGA L 23 L 23 11.213 0 0.659 1.387 14.781 0.000 0.000 13.540 LGA A 24 A 24 15.600 0 0.611 0.575 19.105 0.000 0.000 - LGA A 25 A 25 18.960 0 0.600 0.598 21.424 0.000 0.000 - LGA N 26 N 26 23.038 0 0.620 0.862 25.732 0.000 0.000 23.834 LGA E 27 E 27 24.814 0 0.348 0.435 27.225 0.000 0.000 23.841 LGA L 28 L 28 24.505 0 0.513 0.477 26.370 0.000 0.000 23.236 LGA R 29 R 29 23.532 0 0.534 1.516 31.173 0.000 0.000 31.173 LGA V 30 V 30 20.426 0 0.043 0.074 20.869 0.000 0.000 18.001 LGA T 31 T 31 22.456 0 0.682 0.614 27.161 0.000 0.000 27.161 LGA E 32 E 32 24.088 0 0.580 0.958 27.122 0.000 0.000 27.122 LGA R 33 R 33 25.165 0 0.594 1.452 26.551 0.000 0.000 24.742 LGA P 34 P 34 25.031 0 0.101 0.121 28.293 0.000 0.000 28.219 LGA F 35 F 35 22.485 0 0.151 1.179 23.286 0.000 0.000 16.223 LGA W 36 W 36 25.569 0 0.034 0.881 32.333 0.000 0.000 31.968 LGA I 37 I 37 24.615 0 0.585 1.410 28.405 0.000 0.000 20.870 LGA S 38 S 38 30.846 0 0.149 0.687 34.096 0.000 0.000 32.139 LGA S 39 S 39 31.824 0 0.628 0.795 31.900 0.000 0.000 29.836 LGA F 40 F 40 32.610 0 0.652 0.831 35.753 0.000 0.000 27.468 LGA I 41 I 41 36.610 0 0.033 0.065 40.629 0.000 0.000 33.167 LGA G 42 G 42 43.286 0 0.593 0.593 44.483 0.000 0.000 - LGA R 43 R 43 44.386 0 0.322 1.386 49.014 0.000 0.000 48.829 LGA S 44 S 44 44.221 0 0.696 0.611 48.296 0.000 0.000 48.296 LGA K 45 K 45 39.851 0 0.024 0.755 41.674 0.000 0.000 35.994 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.346 10.235 11.326 10.764 7.855 2.338 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.57 28.409 24.603 0.413 LGA_LOCAL RMSD: 2.565 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 23.251 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.346 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.609941 * X + -0.426456 * Y + 0.667913 * Z + 34.996777 Y_new = 0.759230 * X + -0.073015 * Y + 0.646713 * Z + -12.579656 Z_new = -0.227027 * X + 0.901557 * Y + 0.368313 * Z + -42.075932 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.247587 0.229024 1.182958 [DEG: 128.7773 13.1221 67.7785 ] ZXZ: 2.340070 1.193603 -0.246687 [DEG: 134.0761 68.3884 -14.1342 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS222_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS222_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.57 24.603 10.35 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS222_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 -22.652 34.294 -4.820 1.00 1.53 ATOM 22 CA ALA 2 -21.242 34.003 -4.771 1.00 1.53 ATOM 24 CB ALA 2 -20.381 35.078 -5.471 1.00 1.53 ATOM 28 C ALA 2 -20.793 33.909 -3.336 1.00 1.53 ATOM 29 O ALA 2 -20.965 34.846 -2.556 1.00 1.53 ATOM 30 N VAL 3 -20.188 32.759 -2.969 1.00 1.53 ATOM 32 CA VAL 3 -19.555 32.567 -1.684 1.00 1.53 ATOM 34 CB VAL 3 -19.813 31.208 -1.060 1.00 1.53 ATOM 36 CG1 VAL 3 -19.074 31.082 0.295 1.00 1.53 ATOM 40 CG2 VAL 3 -21.335 31.003 -0.901 1.00 1.53 ATOM 44 C VAL 3 -18.089 32.726 -1.962 1.00 1.53 ATOM 45 O VAL 3 -17.465 31.893 -2.616 1.00 1.53 ATOM 46 N GLN 4 -17.526 33.841 -1.467 1.00 1.45 ATOM 48 CA GLN 4 -16.165 34.246 -1.703 1.00 1.45 ATOM 50 CB GLN 4 -16.143 35.766 -2.007 1.00 1.45 ATOM 53 CG GLN 4 -14.765 36.417 -2.229 1.00 1.45 ATOM 56 CD GLN 4 -14.135 35.913 -3.523 1.00 1.45 ATOM 57 OE1 GLN 4 -14.754 35.934 -4.582 1.00 1.45 ATOM 58 NE2 GLN 4 -12.861 35.461 -3.459 1.00 1.45 ATOM 61 C GLN 4 -15.399 33.997 -0.431 1.00 1.45 ATOM 62 O GLN 4 -15.764 34.528 0.614 1.00 1.45 ATOM 63 N GLY 5 -14.323 33.182 -0.485 1.00 1.44 ATOM 65 CA GLY 5 -13.523 32.883 0.686 1.00 1.44 ATOM 68 C GLY 5 -12.059 33.107 0.424 1.00 1.44 ATOM 69 O GLY 5 -11.459 32.236 -0.193 1.00 1.44 ATOM 70 N PRO 6 -11.403 34.197 0.825 1.00 1.43 ATOM 71 CA PRO 6 -9.948 34.290 0.858 1.00 1.43 ATOM 73 CB PRO 6 -9.664 35.800 0.957 1.00 1.43 ATOM 76 CG PRO 6 -10.917 36.388 1.627 1.00 1.43 ATOM 79 CD PRO 6 -12.042 35.480 1.116 1.00 1.43 ATOM 82 C PRO 6 -9.365 33.560 2.052 1.00 1.43 ATOM 83 O PRO 6 -9.783 33.819 3.177 1.00 1.43 ATOM 84 N TRP 7 -8.385 32.661 1.825 1.00 1.46 ATOM 86 CA TRP 7 -7.778 31.846 2.845 1.00 1.46 ATOM 88 CB TRP 7 -8.029 30.333 2.599 1.00 1.46 ATOM 91 CG TRP 7 -9.493 29.933 2.646 1.00 1.46 ATOM 92 CD1 TRP 7 -10.388 29.871 1.614 1.00 1.46 ATOM 94 NE1 TRP 7 -11.645 29.555 2.082 1.00 1.46 ATOM 96 CE2 TRP 7 -11.569 29.394 3.448 1.00 1.46 ATOM 97 CZ2 TRP 7 -12.544 29.088 4.391 1.00 1.46 ATOM 99 CH2 TRP 7 -12.148 28.950 5.728 1.00 1.46 ATOM 101 CZ3 TRP 7 -10.810 29.134 6.103 1.00 1.46 ATOM 103 CE3 TRP 7 -9.827 29.471 5.162 1.00 1.46 ATOM 105 CD2 TRP 7 -10.224 29.596 3.834 1.00 1.46 ATOM 106 C TRP 7 -6.291 32.069 2.739 1.00 1.46 ATOM 107 O TRP 7 -5.710 31.965 1.657 1.00 1.46 ATOM 108 N VAL 8 -5.631 32.383 3.878 1.00 1.49 ATOM 110 CA VAL 8 -4.201 32.615 3.887 1.00 1.49 ATOM 112 CB VAL 8 -3.802 34.005 4.378 1.00 1.49 ATOM 114 CG1 VAL 8 -2.264 34.179 4.339 1.00 1.49 ATOM 118 CG2 VAL 8 -4.570 35.099 3.600 1.00 1.49 ATOM 122 C VAL 8 -3.644 31.597 4.848 1.00 1.49 ATOM 123 O VAL 8 -4.095 31.509 5.985 1.00 1.49 ATOM 124 N GLY 9 -2.633 30.812 4.416 1.00 1.59 ATOM 126 CA GLY 9 -1.898 29.928 5.296 1.00 1.59 ATOM 129 C GLY 9 -0.570 30.568 5.525 1.00 1.59 ATOM 130 O GLY 9 0.189 30.768 4.583 1.00 1.59 ATOM 131 N SER 10 -0.232 30.931 6.779 1.00 1.80 ATOM 133 CA SER 10 0.939 31.745 7.023 1.00 1.80 ATOM 135 CB SER 10 0.896 32.504 8.357 1.00 1.80 ATOM 138 OG SER 10 -0.160 33.458 8.349 1.00 1.80 ATOM 140 C SER 10 2.201 30.928 6.939 1.00 1.80 ATOM 141 O SER 10 2.426 29.977 7.685 1.00 1.80 ATOM 142 N SER 11 3.054 31.318 5.973 1.00 2.05 ATOM 144 CA SER 11 4.313 30.689 5.664 1.00 2.05 ATOM 146 CB SER 11 4.787 31.070 4.237 1.00 2.05 ATOM 149 OG SER 11 3.860 30.632 3.254 1.00 2.05 ATOM 151 C SER 11 5.366 31.189 6.619 1.00 2.05 ATOM 152 O SER 11 6.253 30.449 7.037 1.00 2.05 ATOM 153 N TYR 12 5.272 32.492 6.970 1.00 2.31 ATOM 155 CA TYR 12 6.248 33.239 7.725 1.00 2.31 ATOM 157 CB TYR 12 5.851 34.749 7.704 1.00 2.31 ATOM 160 CG TYR 12 6.824 35.644 8.433 1.00 2.31 ATOM 161 CD1 TYR 12 8.048 36.003 7.837 1.00 2.31 ATOM 163 CE1 TYR 12 8.954 36.837 8.511 1.00 2.31 ATOM 165 CZ TYR 12 8.641 37.324 9.789 1.00 2.31 ATOM 166 OH TYR 12 9.550 38.161 10.471 1.00 2.31 ATOM 168 CE2 TYR 12 7.422 36.981 10.390 1.00 2.31 ATOM 170 CD2 TYR 12 6.519 36.152 9.710 1.00 2.31 ATOM 172 C TYR 12 6.379 32.732 9.148 1.00 2.31 ATOM 173 O TYR 12 7.497 32.563 9.633 1.00 2.31 ATOM 174 N VAL 13 5.246 32.476 9.851 1.00 2.62 ATOM 176 CA VAL 13 5.276 32.070 11.244 1.00 2.62 ATOM 178 CB VAL 13 4.156 32.627 12.109 1.00 2.62 ATOM 180 CG1 VAL 13 4.302 34.161 12.162 1.00 2.62 ATOM 184 CG2 VAL 13 2.755 32.269 11.575 1.00 2.62 ATOM 188 C VAL 13 5.453 30.575 11.399 1.00 2.62 ATOM 189 O VAL 13 4.519 29.793 11.566 1.00 2.62 ATOM 190 N ALA 14 6.736 30.156 11.388 1.00 2.86 ATOM 192 CA ALA 14 7.164 28.795 11.589 1.00 2.86 ATOM 194 CB ALA 14 8.656 28.637 11.226 1.00 2.86 ATOM 198 C ALA 14 6.968 28.374 13.026 1.00 2.86 ATOM 199 O ALA 14 6.566 27.248 13.310 1.00 2.86 ATOM 200 N GLU 15 7.228 29.310 13.967 1.00 2.98 ATOM 202 CA GLU 15 7.146 29.101 15.392 1.00 2.98 ATOM 204 CB GLU 15 7.735 30.310 16.156 1.00 2.98 ATOM 207 CG GLU 15 9.264 30.423 15.964 1.00 2.98 ATOM 210 CD GLU 15 9.850 31.655 16.655 1.00 2.98 ATOM 211 OE1 GLU 15 9.090 32.467 17.245 1.00 2.98 ATOM 212 OE2 GLU 15 11.097 31.804 16.594 1.00 2.98 ATOM 213 C GLU 15 5.722 28.872 15.842 1.00 2.98 ATOM 214 O GLU 15 5.471 28.036 16.708 1.00 2.98 ATOM 215 N THR 16 4.743 29.586 15.236 1.00 3.00 ATOM 217 CA THR 16 3.334 29.412 15.538 1.00 3.00 ATOM 219 CB THR 16 2.490 30.575 15.042 1.00 3.00 ATOM 221 CG2 THR 16 0.999 30.362 15.392 1.00 3.00 ATOM 225 OG1 THR 16 2.921 31.774 15.673 1.00 3.00 ATOM 227 C THR 16 2.850 28.116 14.925 1.00 3.00 ATOM 228 O THR 16 2.092 27.373 15.548 1.00 3.00 ATOM 229 N GLY 17 3.324 27.792 13.697 1.00 2.93 ATOM 231 CA GLY 17 2.976 26.560 13.028 1.00 2.93 ATOM 234 C GLY 17 1.786 26.829 12.176 1.00 2.93 ATOM 235 O GLY 17 1.881 27.558 11.192 1.00 2.93 ATOM 236 N GLN 18 0.622 26.245 12.536 1.00 2.96 ATOM 238 CA GLN 18 -0.586 26.413 11.766 1.00 2.96 ATOM 240 CB GLN 18 -1.542 25.201 11.863 1.00 2.96 ATOM 243 CG GLN 18 -0.929 23.905 11.304 1.00 2.96 ATOM 246 CD GLN 18 -0.641 24.070 9.806 1.00 2.96 ATOM 247 OE1 GLN 18 -1.539 24.312 9.003 1.00 2.96 ATOM 248 NE2 GLN 18 0.653 23.962 9.409 1.00 2.96 ATOM 251 C GLN 18 -1.305 27.662 12.180 1.00 2.96 ATOM 252 O GLN 18 -2.173 27.654 13.053 1.00 2.96 ATOM 253 N ASN 19 -0.941 28.774 11.510 1.00 3.36 ATOM 255 CA ASN 19 -1.624 30.030 11.609 1.00 3.36 ATOM 257 CB ASN 19 -0.657 31.214 11.852 1.00 3.36 ATOM 260 CG ASN 19 -1.381 32.566 11.957 1.00 3.36 ATOM 261 OD1 ASN 19 -2.573 32.643 12.246 1.00 3.36 ATOM 262 ND2 ASN 19 -0.644 33.678 11.719 1.00 3.36 ATOM 265 C ASN 19 -2.321 30.167 10.282 1.00 3.36 ATOM 266 O ASN 19 -1.697 30.245 9.226 1.00 3.36 ATOM 267 N TRP 20 -3.657 30.177 10.349 1.00 4.21 ATOM 269 CA TRP 20 -4.552 30.342 9.244 1.00 4.21 ATOM 271 CB TRP 20 -5.614 29.223 9.229 1.00 4.21 ATOM 274 CG TRP 20 -5.080 27.866 8.818 1.00 4.21 ATOM 275 CD1 TRP 20 -4.401 26.912 9.526 1.00 4.21 ATOM 277 NE1 TRP 20 -4.291 25.755 8.782 1.00 4.21 ATOM 279 CE2 TRP 20 -5.002 25.921 7.612 1.00 4.21 ATOM 280 CZ2 TRP 20 -5.286 25.041 6.572 1.00 4.21 ATOM 282 CH2 TRP 20 -6.126 25.495 5.541 1.00 4.21 ATOM 284 CZ3 TRP 20 -6.652 26.796 5.552 1.00 4.21 ATOM 286 CE3 TRP 20 -6.337 27.689 6.577 1.00 4.21 ATOM 288 CD2 TRP 20 -5.519 27.234 7.608 1.00 4.21 ATOM 289 C TRP 20 -5.272 31.636 9.431 1.00 4.21 ATOM 290 O TRP 20 -5.811 31.899 10.505 1.00 4.21 ATOM 291 N ALA 21 -5.352 32.453 8.355 1.00 5.19 ATOM 293 CA ALA 21 -6.306 33.523 8.285 1.00 5.19 ATOM 295 CB ALA 21 -5.878 34.747 7.459 1.00 5.19 ATOM 299 C ALA 21 -7.516 32.893 7.669 1.00 5.19 ATOM 300 O ALA 21 -7.614 32.706 6.451 1.00 5.19 ATOM 301 N SER 22 -8.423 32.498 8.580 1.00 6.35 ATOM 303 CA SER 22 -9.632 31.790 8.288 1.00 6.35 ATOM 305 CB SER 22 -10.057 30.835 9.432 1.00 6.35 ATOM 308 OG SER 22 -9.106 29.791 9.595 1.00 6.35 ATOM 310 C SER 22 -10.728 32.796 8.162 1.00 6.35 ATOM 311 O SER 22 -10.970 33.582 9.078 1.00 6.35 ATOM 312 N LEU 23 -11.452 32.769 7.026 1.00 7.73 ATOM 314 CA LEU 23 -12.706 33.470 6.905 1.00 7.73 ATOM 316 CB LEU 23 -13.068 33.841 5.436 1.00 7.73 ATOM 319 CG LEU 23 -14.408 34.616 5.270 1.00 7.73 ATOM 321 CD1 LEU 23 -14.374 36.033 5.868 1.00 7.73 ATOM 325 CD2 LEU 23 -14.929 34.641 3.830 1.00 7.73 ATOM 329 C LEU 23 -13.757 32.529 7.437 1.00 7.73 ATOM 330 O LEU 23 -13.695 31.328 7.182 1.00 7.73 ATOM 331 N ALA 24 -14.764 33.047 8.180 1.00 8.61 ATOM 333 CA ALA 24 -15.912 32.263 8.566 1.00 8.61 ATOM 335 CB ALA 24 -16.749 32.954 9.662 1.00 8.61 ATOM 339 C ALA 24 -16.774 32.059 7.346 1.00 8.61 ATOM 340 O ALA 24 -17.287 33.015 6.762 1.00 8.61 ATOM 341 N ALA 25 -16.897 30.792 6.905 1.00 8.62 ATOM 343 CA ALA 25 -17.578 30.477 5.678 1.00 8.62 ATOM 345 CB ALA 25 -16.608 30.311 4.492 1.00 8.62 ATOM 349 C ALA 25 -18.336 29.213 5.898 1.00 8.62 ATOM 350 O ALA 25 -18.045 28.450 6.819 1.00 8.62 ATOM 351 N ASN 26 -19.363 28.982 5.045 1.00 7.61 ATOM 353 CA ASN 26 -20.341 27.938 5.223 1.00 7.61 ATOM 355 CB ASN 26 -21.509 28.104 4.207 1.00 7.61 ATOM 358 CG ASN 26 -22.692 27.150 4.461 1.00 7.61 ATOM 359 OD1 ASN 26 -22.589 26.070 5.037 1.00 7.61 ATOM 360 ND2 ASN 26 -23.895 27.570 3.996 1.00 7.61 ATOM 363 C ASN 26 -19.645 26.619 5.048 1.00 7.61 ATOM 364 O ASN 26 -19.142 26.320 3.969 1.00 7.61 ATOM 365 N GLU 27 -19.572 25.849 6.160 1.00 5.90 ATOM 367 CA GLU 27 -19.037 24.516 6.261 1.00 5.90 ATOM 369 CB GLU 27 -20.138 23.452 6.031 1.00 5.90 ATOM 372 CG GLU 27 -21.245 23.436 7.114 1.00 5.90 ATOM 375 CD GLU 27 -20.737 22.825 8.429 1.00 5.90 ATOM 376 OE1 GLU 27 -19.631 22.220 8.447 1.00 5.90 ATOM 377 OE2 GLU 27 -21.456 22.948 9.453 1.00 5.90 ATOM 378 C GLU 27 -17.735 24.275 5.524 1.00 5.90 ATOM 379 O GLU 27 -17.546 23.272 4.842 1.00 5.90 ATOM 380 N LEU 28 -16.795 25.230 5.670 1.00 4.19 ATOM 382 CA LEU 28 -15.443 25.110 5.205 1.00 4.19 ATOM 384 CB LEU 28 -15.000 26.264 4.286 1.00 4.19 ATOM 387 CG LEU 28 -15.773 26.370 2.956 1.00 4.19 ATOM 389 CD1 LEU 28 -15.357 27.622 2.176 1.00 4.19 ATOM 393 CD2 LEU 28 -15.664 25.120 2.064 1.00 4.19 ATOM 397 C LEU 28 -14.642 25.161 6.461 1.00 4.19 ATOM 398 O LEU 28 -14.475 26.220 7.065 1.00 4.19 ATOM 399 N ARG 29 -14.177 23.978 6.903 1.00 3.17 ATOM 401 CA ARG 29 -13.559 23.788 8.190 1.00 3.17 ATOM 403 CB ARG 29 -14.113 22.549 8.935 1.00 3.17 ATOM 406 CG ARG 29 -15.573 22.713 9.386 1.00 3.17 ATOM 409 CD ARG 29 -16.147 21.456 10.060 1.00 3.17 ATOM 412 NE ARG 29 -17.580 21.714 10.421 1.00 3.17 ATOM 414 CZ ARG 29 -17.975 22.320 11.573 1.00 3.17 ATOM 415 NH1 ARG 29 -17.125 22.593 12.590 1.00 3.17 ATOM 418 NH2 ARG 29 -19.277 22.660 11.705 1.00 3.17 ATOM 421 C ARG 29 -12.065 23.685 8.040 1.00 3.17 ATOM 422 O ARG 29 -11.535 23.168 7.060 1.00 3.17 ATOM 423 N VAL 30 -11.347 24.220 9.044 1.00 2.88 ATOM 425 CA VAL 30 -9.910 24.202 9.121 1.00 2.88 ATOM 427 CB VAL 30 -9.358 25.587 9.382 1.00 2.88 ATOM 429 CG1 VAL 30 -7.829 25.551 9.527 1.00 2.88 ATOM 433 CG2 VAL 30 -9.750 26.478 8.186 1.00 2.88 ATOM 437 C VAL 30 -9.537 23.287 10.248 1.00 2.88 ATOM 438 O VAL 30 -9.958 23.496 11.385 1.00 2.88 ATOM 439 N THR 31 -8.718 22.251 9.958 1.00 2.82 ATOM 441 CA THR 31 -8.161 21.384 10.976 1.00 2.82 ATOM 443 CB THR 31 -8.575 19.918 10.859 1.00 2.82 ATOM 445 CG2 THR 31 -10.116 19.821 10.925 1.00 2.82 ATOM 449 OG1 THR 31 -8.142 19.317 9.650 1.00 2.82 ATOM 451 C THR 31 -6.668 21.627 10.951 1.00 2.82 ATOM 452 O THR 31 -6.211 22.657 10.452 1.00 2.82 ATOM 453 N GLU 32 -5.854 20.718 11.538 1.00 2.82 ATOM 455 CA GLU 32 -4.430 20.928 11.648 1.00 2.82 ATOM 457 CB GLU 32 -3.778 20.017 12.714 1.00 2.82 ATOM 460 CG GLU 32 -4.195 20.417 14.149 1.00 2.82 ATOM 463 CD GLU 32 -3.619 19.472 15.208 1.00 2.82 ATOM 464 OE1 GLU 32 -2.927 18.481 14.858 1.00 2.82 ATOM 465 OE2 GLU 32 -3.878 19.737 16.410 1.00 2.82 ATOM 466 C GLU 32 -3.743 20.755 10.312 1.00 2.82 ATOM 467 O GLU 32 -3.017 21.648 9.887 1.00 2.82 ATOM 468 N ARG 33 -3.962 19.625 9.601 1.00 2.87 ATOM 470 CA ARG 33 -3.426 19.455 8.261 1.00 2.87 ATOM 472 CB ARG 33 -2.545 18.190 8.046 1.00 2.87 ATOM 475 CG ARG 33 -1.223 18.214 8.829 1.00 2.87 ATOM 478 CD ARG 33 -0.378 16.938 8.665 1.00 2.87 ATOM 481 NE ARG 33 0.092 16.823 7.242 1.00 2.87 ATOM 483 CZ ARG 33 1.219 17.431 6.779 1.00 2.87 ATOM 484 NH1 ARG 33 2.042 18.145 7.580 1.00 2.87 ATOM 487 NH2 ARG 33 1.532 17.322 5.468 1.00 2.87 ATOM 490 C ARG 33 -4.502 19.636 7.209 1.00 2.87 ATOM 491 O ARG 33 -4.294 20.505 6.358 1.00 2.87 ATOM 492 N PRO 34 -5.638 18.926 7.156 1.00 2.90 ATOM 493 CA PRO 34 -6.628 19.156 6.116 1.00 2.90 ATOM 495 CB PRO 34 -7.618 17.990 6.258 1.00 2.90 ATOM 498 CG PRO 34 -6.825 16.872 6.928 1.00 2.90 ATOM 501 CD PRO 34 -5.861 17.639 7.829 1.00 2.90 ATOM 504 C PRO 34 -7.395 20.454 6.206 1.00 2.90 ATOM 505 O PRO 34 -7.749 20.912 7.289 1.00 2.90 ATOM 506 N PHE 35 -7.726 21.004 5.028 1.00 2.99 ATOM 508 CA PHE 35 -8.848 21.868 4.808 1.00 2.99 ATOM 510 CB PHE 35 -8.558 22.833 3.635 1.00 2.99 ATOM 513 CG PHE 35 -9.678 23.804 3.406 1.00 2.99 ATOM 514 CD1 PHE 35 -9.918 24.824 4.338 1.00 2.99 ATOM 516 CE1 PHE 35 -10.886 25.801 4.082 1.00 2.99 ATOM 518 CZ PHE 35 -11.618 25.765 2.887 1.00 2.99 ATOM 520 CE2 PHE 35 -11.421 24.728 1.970 1.00 2.99 ATOM 522 CD2 PHE 35 -10.449 23.752 2.231 1.00 2.99 ATOM 524 C PHE 35 -9.994 20.956 4.446 1.00 2.99 ATOM 525 O PHE 35 -9.956 20.274 3.422 1.00 2.99 ATOM 526 N TRP 36 -11.034 20.929 5.300 1.00 3.21 ATOM 528 CA TRP 36 -12.228 20.150 5.094 1.00 3.21 ATOM 530 CB TRP 36 -12.893 19.624 6.386 1.00 3.21 ATOM 533 CG TRP 36 -12.173 18.543 7.162 1.00 3.21 ATOM 534 CD1 TRP 36 -11.041 17.843 6.866 1.00 3.21 ATOM 536 NE1 TRP 36 -10.769 16.926 7.860 1.00 3.21 ATOM 538 CE2 TRP 36 -11.752 17.018 8.820 1.00 3.21 ATOM 539 CZ2 TRP 36 -11.952 16.314 10.005 1.00 3.21 ATOM 541 CH2 TRP 36 -13.080 16.635 10.780 1.00 3.21 ATOM 543 CZ3 TRP 36 -13.977 17.640 10.374 1.00 3.21 ATOM 545 CE3 TRP 36 -13.772 18.349 9.182 1.00 3.21 ATOM 547 CD2 TRP 36 -12.654 18.025 8.414 1.00 3.21 ATOM 548 C TRP 36 -13.247 20.996 4.392 1.00 3.21 ATOM 549 O TRP 36 -13.603 22.083 4.834 1.00 3.21 ATOM 550 N ILE 37 -13.742 20.472 3.265 1.00 3.54 ATOM 552 CA ILE 37 -14.740 21.078 2.436 1.00 3.54 ATOM 554 CB ILE 37 -14.369 20.925 0.971 1.00 3.54 ATOM 556 CG2 ILE 37 -15.496 21.529 0.106 1.00 3.54 ATOM 560 CG1 ILE 37 -12.995 21.578 0.682 1.00 3.54 ATOM 563 CD1 ILE 37 -12.428 21.240 -0.696 1.00 3.54 ATOM 567 C ILE 37 -15.963 20.268 2.719 1.00 3.54 ATOM 568 O ILE 37 -16.131 19.192 2.153 1.00 3.54 ATOM 569 N SER 38 -16.845 20.735 3.622 1.00 3.92 ATOM 571 CA SER 38 -18.080 20.035 3.888 1.00 3.92 ATOM 573 CB SER 38 -18.464 19.990 5.384 1.00 3.92 ATOM 576 OG SER 38 -17.512 19.224 6.113 1.00 3.92 ATOM 578 C SER 38 -19.164 20.573 2.993 1.00 3.92 ATOM 579 O SER 38 -19.884 19.792 2.371 1.00 3.92 ATOM 580 N SER 39 -19.262 21.919 2.853 1.00 4.33 ATOM 582 CA SER 39 -20.167 22.569 1.922 1.00 4.33 ATOM 584 CB SER 39 -20.279 24.111 2.125 1.00 4.33 ATOM 587 OG SER 39 -21.127 24.773 1.180 1.00 4.33 ATOM 589 C SER 39 -19.674 22.367 0.518 1.00 4.33 ATOM 590 O SER 39 -18.549 22.731 0.186 1.00 4.33 ATOM 591 N PHE 40 -20.567 21.828 -0.332 1.00 4.91 ATOM 593 CA PHE 40 -20.428 21.867 -1.759 1.00 4.91 ATOM 595 CB PHE 40 -20.237 20.511 -2.484 1.00 4.91 ATOM 598 CG PHE 40 -18.912 19.860 -2.199 1.00 4.91 ATOM 599 CD1 PHE 40 -18.774 18.801 -1.285 1.00 4.91 ATOM 601 CE1 PHE 40 -17.540 18.151 -1.140 1.00 4.91 ATOM 603 CZ PHE 40 -16.426 18.571 -1.876 1.00 4.91 ATOM 605 CE2 PHE 40 -16.542 19.647 -2.768 1.00 4.91 ATOM 607 CD2 PHE 40 -17.778 20.287 -2.922 1.00 4.91 ATOM 609 C PHE 40 -21.623 22.556 -2.343 1.00 4.91 ATOM 610 O PHE 40 -22.697 22.624 -1.745 1.00 4.91 ATOM 611 N ILE 41 -21.418 23.080 -3.570 1.00 5.46 ATOM 613 CA ILE 41 -22.357 23.829 -4.366 1.00 5.46 ATOM 615 CB ILE 41 -21.754 24.247 -5.701 1.00 5.46 ATOM 617 CG2 ILE 41 -22.809 24.828 -6.677 1.00 5.46 ATOM 621 CG1 ILE 41 -20.614 25.245 -5.426 1.00 5.46 ATOM 624 CD1 ILE 41 -19.800 25.633 -6.650 1.00 5.46 ATOM 628 C ILE 41 -23.626 23.068 -4.597 1.00 5.46 ATOM 629 O ILE 41 -23.618 21.889 -4.950 1.00 5.46 ATOM 630 N GLY 42 -24.753 23.777 -4.385 1.00 5.93 ATOM 632 CA GLY 42 -26.061 23.310 -4.723 1.00 5.93 ATOM 635 C GLY 42 -26.557 24.253 -5.761 1.00 5.93 ATOM 636 O GLY 42 -26.789 25.432 -5.489 1.00 5.93 ATOM 637 N ARG 43 -26.734 23.713 -6.984 1.00 6.28 ATOM 639 CA ARG 43 -27.383 24.321 -8.119 1.00 6.28 ATOM 641 CB ARG 43 -28.875 24.651 -7.821 1.00 6.28 ATOM 644 CG ARG 43 -29.719 23.412 -7.479 1.00 6.28 ATOM 647 CD ARG 43 -31.171 23.761 -7.126 1.00 6.28 ATOM 650 NE ARG 43 -31.855 22.509 -6.664 1.00 6.28 ATOM 652 CZ ARG 43 -33.122 22.508 -6.170 1.00 6.28 ATOM 653 NH1 ARG 43 -33.893 23.619 -6.165 1.00 6.28 ATOM 656 NH2 ARG 43 -33.624 21.366 -5.649 1.00 6.28 ATOM 659 C ARG 43 -26.605 25.519 -8.639 1.00 6.28 ATOM 660 O ARG 43 -25.495 25.382 -9.153 1.00 6.28 ATOM 661 N SER 44 -27.202 26.726 -8.543 1.00 6.18 ATOM 663 CA SER 44 -26.741 27.933 -9.193 1.00 6.18 ATOM 665 CB SER 44 -27.899 28.950 -9.356 1.00 6.18 ATOM 668 OG SER 44 -28.915 28.413 -10.194 1.00 6.18 ATOM 670 C SER 44 -25.636 28.659 -8.463 1.00 6.18 ATOM 671 O SER 44 -24.999 29.528 -9.055 1.00 6.18 ATOM 672 N LYS 45 -25.382 28.350 -7.168 1.00 5.92 ATOM 674 CA LYS 45 -24.430 29.097 -6.362 1.00 5.92 ATOM 676 CB LYS 45 -24.496 28.710 -4.870 1.00 5.92 ATOM 679 CG LYS 45 -25.821 29.093 -4.205 1.00 5.92 ATOM 682 CD LYS 45 -25.856 28.736 -2.716 1.00 5.92 ATOM 685 CE LYS 45 -27.180 29.114 -2.040 1.00 5.92 ATOM 688 NZ LYS 45 -27.157 28.756 -0.606 1.00 5.92 ATOM 692 C LYS 45 -23.007 28.890 -6.825 1.00 5.92 ATOM 693 O LYS 45 -22.672 27.830 -7.339 1.00 5.92 TER END