####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS222_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS222_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 21 - 41 4.97 14.46 LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 4.88 14.64 LCS_AVERAGE: 40.29 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 10 - 19 1.64 26.07 LCS_AVERAGE: 15.34 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 13 - 18 0.72 26.42 LONGEST_CONTINUOUS_SEGMENT: 6 14 - 19 0.82 26.10 LCS_AVERAGE: 9.71 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 5 8 4 4 5 5 6 7 8 8 10 14 15 18 22 23 24 25 28 30 32 32 LCS_GDT V 3 V 3 5 5 8 4 4 5 5 6 7 8 11 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT Q 4 Q 4 5 5 8 4 4 5 5 6 7 9 11 12 14 15 17 22 23 24 25 28 30 32 32 LCS_GDT G 5 G 5 5 5 13 4 4 5 5 6 7 8 9 10 12 14 15 18 21 23 25 28 30 32 32 LCS_GDT P 6 P 6 5 5 16 1 3 5 5 6 7 8 8 9 12 13 15 18 21 23 25 28 30 32 32 LCS_GDT W 7 W 7 3 4 16 0 3 4 4 4 5 7 8 9 11 13 14 18 21 23 25 28 30 32 32 LCS_GDT V 8 V 8 3 4 16 3 4 4 4 4 5 7 8 11 12 13 14 18 21 23 25 27 30 32 32 LCS_GDT G 9 G 9 3 4 16 3 4 4 4 5 6 9 10 12 13 13 14 17 21 23 25 27 30 32 32 LCS_GDT S 10 S 10 5 10 16 4 5 7 8 9 10 10 10 12 13 13 14 16 18 19 21 23 28 30 31 LCS_GDT S 11 S 11 5 10 16 4 5 7 8 9 10 10 10 12 13 13 14 15 16 16 18 19 22 24 25 LCS_GDT Y 12 Y 12 5 10 16 4 5 5 6 9 10 10 10 12 13 13 14 15 15 16 17 18 19 21 24 LCS_GDT V 13 V 13 6 10 16 4 6 6 7 9 10 10 10 12 13 13 14 15 16 18 21 21 22 24 26 LCS_GDT A 14 A 14 6 10 16 4 6 7 8 9 10 10 10 12 13 13 14 15 16 16 18 19 20 24 25 LCS_GDT E 15 E 15 6 10 16 4 6 7 8 9 10 10 10 12 13 13 14 15 15 16 17 18 19 21 22 LCS_GDT T 16 T 16 6 10 16 4 6 7 8 9 10 10 10 12 13 13 14 15 16 16 17 19 19 21 23 LCS_GDT G 17 G 17 6 10 16 4 6 7 8 9 10 10 10 12 13 13 14 15 16 17 21 21 22 24 26 LCS_GDT Q 18 Q 18 6 10 16 4 6 7 8 9 10 10 10 12 13 13 14 16 18 20 22 24 28 30 31 LCS_GDT N 19 N 19 6 10 16 4 5 7 8 9 10 10 10 12 13 13 15 18 21 23 25 28 30 32 32 LCS_GDT W 20 W 20 4 5 18 4 4 4 5 5 7 9 11 12 14 15 17 22 23 24 25 28 30 32 32 LCS_GDT A 21 A 21 4 5 21 4 4 4 5 5 7 9 11 12 14 15 19 22 23 24 25 28 30 32 32 LCS_GDT S 22 S 22 4 5 21 4 4 4 5 6 7 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT L 23 L 23 3 3 21 3 3 4 4 7 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT A 24 A 24 3 4 21 3 3 4 5 7 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT A 25 A 25 3 5 21 3 3 4 4 4 5 6 8 10 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 4 5 6 7 10 12 15 17 21 23 24 25 28 30 32 32 LCS_GDT E 27 E 27 3 6 21 3 3 4 5 6 6 9 9 11 13 15 16 21 23 24 25 28 30 32 32 LCS_GDT L 28 L 28 3 6 21 3 3 4 5 6 7 9 11 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT R 29 R 29 4 6 21 3 4 4 5 6 7 9 11 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT V 30 V 30 4 9 21 3 4 4 5 8 9 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT T 31 T 31 4 9 21 3 4 4 5 8 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT E 32 E 32 4 9 21 3 4 4 5 7 10 12 12 12 14 16 18 19 22 24 25 26 29 32 32 LCS_GDT R 33 R 33 3 9 21 3 4 5 6 8 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT P 34 P 34 5 9 21 3 4 5 6 8 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT F 35 F 35 5 9 21 3 4 5 6 8 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT W 36 W 36 5 9 21 3 4 5 6 8 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT I 37 I 37 5 9 21 3 4 5 6 8 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT S 38 S 38 5 9 21 3 4 5 6 8 10 12 12 12 14 16 18 19 22 24 25 26 29 32 32 LCS_GDT S 39 S 39 4 5 21 3 4 4 4 6 7 9 9 10 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT F 40 F 40 4 5 21 3 4 4 4 6 7 9 9 10 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT I 41 I 41 3 4 21 3 3 3 4 4 6 9 9 10 14 17 19 22 23 24 25 28 30 32 32 LCS_GDT G 42 G 42 3 4 21 3 3 3 4 5 7 9 9 10 12 16 19 22 23 24 25 28 30 32 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 3 4 4 8 9 9 10 12 14 15 16 16 18 21 23 28 29 LCS_GDT S 44 S 44 3 4 13 3 3 3 3 5 6 8 9 10 11 12 14 15 16 17 18 21 23 24 29 LCS_GDT K 45 K 45 3 3 13 0 3 3 4 6 7 8 9 10 11 12 13 15 16 17 18 21 24 28 29 LCS_AVERAGE LCS_A: 21.78 ( 9.71 15.34 40.29 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 6 7 8 9 10 12 12 12 14 17 19 22 23 24 25 28 30 32 32 GDT PERCENT_AT 9.09 13.64 15.91 18.18 20.45 22.73 27.27 27.27 27.27 31.82 38.64 43.18 50.00 52.27 54.55 56.82 63.64 68.18 72.73 72.73 GDT RMS_LOCAL 0.23 0.72 1.06 1.16 1.36 1.64 9.44 9.44 3.01 3.60 4.17 4.51 4.95 5.08 5.22 5.36 6.21 6.49 6.71 6.71 GDT RMS_ALL_AT 18.32 26.42 25.53 25.70 25.81 26.07 16.05 16.05 25.01 12.32 13.91 13.50 12.52 12.55 12.64 12.72 11.66 11.28 11.36 11.36 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.617 0 0.125 0.183 20.948 0.000 0.000 - LGA V 3 V 3 12.583 0 0.091 0.122 15.175 0.000 0.000 8.504 LGA Q 4 Q 4 15.804 0 0.098 1.207 23.617 0.000 0.000 21.383 LGA G 5 G 5 15.672 0 0.288 0.288 18.900 0.000 0.000 - LGA P 6 P 6 19.478 0 0.653 0.543 21.771 0.000 0.000 21.771 LGA W 7 W 7 18.524 0 0.374 0.379 19.054 0.000 0.000 18.914 LGA V 8 V 8 19.256 0 0.668 0.706 20.926 0.000 0.000 19.993 LGA G 9 G 9 19.227 0 0.557 0.557 21.229 0.000 0.000 - LGA S 10 S 10 24.936 0 0.625 0.690 26.811 0.000 0.000 26.811 LGA S 11 S 11 28.316 0 0.075 0.640 29.529 0.000 0.000 29.312 LGA Y 12 Y 12 27.051 0 0.062 1.118 28.375 0.000 0.000 28.375 LGA V 13 V 13 25.560 0 0.288 1.209 26.780 0.000 0.000 26.780 LGA A 14 A 14 26.986 0 0.043 0.062 28.340 0.000 0.000 - LGA E 15 E 15 27.759 0 0.038 1.189 33.604 0.000 0.000 31.872 LGA T 16 T 16 23.526 0 0.130 1.142 25.085 0.000 0.000 24.107 LGA G 17 G 17 21.624 0 0.199 0.199 22.613 0.000 0.000 - LGA Q 18 Q 18 18.349 0 0.565 1.199 19.593 0.000 0.000 18.635 LGA N 19 N 19 17.026 0 0.617 1.323 19.574 0.000 0.000 16.622 LGA W 20 W 20 10.507 0 0.098 0.268 15.704 0.000 0.000 14.402 LGA A 21 A 21 8.534 0 0.605 0.555 9.973 0.000 0.000 - LGA S 22 S 22 3.176 0 0.625 0.687 4.991 14.545 10.303 4.991 LGA L 23 L 23 2.445 0 0.658 1.389 7.823 40.000 22.500 4.581 LGA A 24 A 24 1.922 0 0.616 0.581 5.525 25.000 22.182 - LGA A 25 A 25 6.933 0 0.594 0.594 7.991 0.455 0.364 - LGA N 26 N 26 11.853 0 0.602 1.061 17.644 0.000 0.000 16.214 LGA E 27 E 27 10.710 0 0.273 1.062 15.827 0.000 0.000 15.827 LGA L 28 L 28 8.096 0 0.559 0.517 10.170 0.000 0.000 7.556 LGA R 29 R 29 7.379 0 0.530 1.427 10.729 0.000 0.000 7.787 LGA V 30 V 30 3.398 0 0.067 0.169 5.150 28.182 18.961 4.651 LGA T 31 T 31 2.683 0 0.684 0.617 6.368 46.364 26.753 5.447 LGA E 32 E 32 2.967 0 0.587 1.404 8.079 21.364 9.495 6.967 LGA R 33 R 33 2.863 0 0.583 1.412 15.143 45.455 16.529 15.143 LGA P 34 P 34 2.595 0 0.088 0.373 6.058 42.727 25.455 6.058 LGA F 35 F 35 1.127 0 0.099 1.253 4.151 86.818 44.298 4.151 LGA W 36 W 36 1.616 0 0.037 0.946 12.113 58.636 19.221 12.113 LGA I 37 I 37 1.289 0 0.615 1.432 5.128 56.818 44.773 5.128 LGA S 38 S 38 0.747 0 0.217 0.709 4.030 46.818 37.576 3.592 LGA S 39 S 39 7.611 0 0.699 0.816 11.197 0.000 0.000 11.197 LGA F 40 F 40 10.217 0 0.463 0.777 11.838 0.000 0.000 11.658 LGA I 41 I 41 12.347 0 0.092 0.093 14.943 0.000 0.000 11.750 LGA G 42 G 42 16.421 0 0.594 0.594 20.023 0.000 0.000 - LGA R 43 R 43 22.404 0 0.268 1.071 29.489 0.000 0.000 29.489 LGA S 44 S 44 24.782 0 0.286 0.776 26.809 0.000 0.000 26.809 LGA K 45 K 45 23.119 0 0.051 0.778 25.018 0.000 0.000 20.539 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.251 10.141 11.223 11.663 6.782 0.623 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.39 28.977 25.715 0.483 LGA_LOCAL RMSD: 2.386 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.046 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.251 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.413641 * X + 0.642252 * Y + -0.645301 * Z + -54.397438 Y_new = -0.878563 * X + 0.095667 * Y + -0.467948 * Z + 78.903740 Z_new = -0.238806 * X + 0.760500 * Y + 0.603831 * Z + -30.419834 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.130768 0.241137 0.899729 [DEG: -64.7882 13.8161 51.5507 ] ZXZ: -0.943382 0.922498 -0.304262 [DEG: -54.0518 52.8552 -17.4329 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS222_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS222_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.39 25.715 10.25 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS222_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 20 N ALA 2 3.080 26.759 -0.594 1.00 1.60 ATOM 22 CA ALA 2 1.753 27.242 -0.306 1.00 1.60 ATOM 24 CB ALA 2 0.660 26.189 -0.596 1.00 1.60 ATOM 28 C ALA 2 1.674 27.611 1.151 1.00 1.60 ATOM 29 O ALA 2 1.947 26.788 2.022 1.00 1.60 ATOM 30 N VAL 3 1.303 28.875 1.437 1.00 1.60 ATOM 32 CA VAL 3 1.126 29.358 2.786 1.00 1.60 ATOM 34 CB VAL 3 1.790 30.699 3.051 1.00 1.60 ATOM 36 CG1 VAL 3 1.529 31.144 4.510 1.00 1.60 ATOM 40 CG2 VAL 3 3.302 30.577 2.759 1.00 1.60 ATOM 44 C VAL 3 -0.359 29.475 2.964 1.00 1.60 ATOM 45 O VAL 3 -1.007 30.315 2.350 1.00 1.60 ATOM 46 N GLN 4 -0.922 28.594 3.809 1.00 1.46 ATOM 48 CA GLN 4 -2.341 28.423 3.990 1.00 1.46 ATOM 50 CB GLN 4 -2.650 26.903 3.903 1.00 1.46 ATOM 53 CG GLN 4 -4.114 26.474 4.092 1.00 1.46 ATOM 56 CD GLN 4 -4.953 26.945 2.906 1.00 1.46 ATOM 57 OE1 GLN 4 -4.626 26.689 1.751 1.00 1.46 ATOM 58 NE2 GLN 4 -6.073 27.653 3.176 1.00 1.46 ATOM 61 C GLN 4 -2.692 28.932 5.369 1.00 1.46 ATOM 62 O GLN 4 -2.138 28.463 6.361 1.00 1.46 ATOM 63 N GLY 5 -3.621 29.912 5.475 1.00 1.40 ATOM 65 CA GLY 5 -4.029 30.437 6.766 1.00 1.40 ATOM 68 C GLY 5 -5.522 30.543 6.890 1.00 1.40 ATOM 69 O GLY 5 -6.064 31.521 6.387 1.00 1.40 ATOM 70 N PRO 6 -6.254 29.613 7.509 1.00 1.37 ATOM 71 CA PRO 6 -7.660 29.795 7.860 1.00 1.37 ATOM 73 CB PRO 6 -8.201 28.362 8.022 1.00 1.37 ATOM 76 CG PRO 6 -6.970 27.523 8.406 1.00 1.37 ATOM 79 CD PRO 6 -5.824 28.226 7.670 1.00 1.37 ATOM 82 C PRO 6 -7.858 30.592 9.133 1.00 1.37 ATOM 83 O PRO 6 -7.229 30.285 10.143 1.00 1.37 ATOM 84 N TRP 7 -8.754 31.605 9.097 1.00 1.37 ATOM 86 CA TRP 7 -9.017 32.521 10.178 1.00 1.37 ATOM 88 CB TRP 7 -8.565 33.954 9.809 1.00 1.37 ATOM 91 CG TRP 7 -7.076 34.101 9.580 1.00 1.37 ATOM 92 CD1 TRP 7 -6.374 33.864 8.437 1.00 1.37 ATOM 94 NE1 TRP 7 -5.030 34.065 8.648 1.00 1.37 ATOM 96 CE2 TRP 7 -4.863 34.573 9.911 1.00 1.37 ATOM 97 CZ2 TRP 7 -3.726 35.010 10.580 1.00 1.37 ATOM 99 CH2 TRP 7 -3.882 35.518 11.877 1.00 1.37 ATOM 101 CZ3 TRP 7 -5.148 35.565 12.478 1.00 1.37 ATOM 103 CE3 TRP 7 -6.295 35.114 11.813 1.00 1.37 ATOM 105 CD2 TRP 7 -6.134 34.622 10.525 1.00 1.37 ATOM 106 C TRP 7 -10.511 32.595 10.410 1.00 1.37 ATOM 107 O TRP 7 -11.311 32.612 9.468 1.00 1.37 ATOM 108 N VAL 8 -10.931 32.662 11.692 1.00 1.44 ATOM 110 CA VAL 8 -12.336 32.729 12.044 1.00 1.44 ATOM 112 CB VAL 8 -12.837 31.520 12.836 1.00 1.44 ATOM 114 CG1 VAL 8 -14.350 31.649 13.154 1.00 1.44 ATOM 118 CG2 VAL 8 -12.476 30.212 12.097 1.00 1.44 ATOM 122 C VAL 8 -12.471 33.950 12.917 1.00 1.44 ATOM 123 O VAL 8 -11.715 34.116 13.865 1.00 1.44 ATOM 124 N GLY 9 -13.450 34.834 12.632 1.00 1.52 ATOM 126 CA GLY 9 -13.768 35.945 13.508 1.00 1.52 ATOM 129 C GLY 9 -15.087 35.706 14.163 1.00 1.52 ATOM 130 O GLY 9 -16.100 35.600 13.483 1.00 1.52 ATOM 131 N SER 10 -15.140 35.637 15.514 1.00 1.62 ATOM 133 CA SER 10 -16.381 35.318 16.193 1.00 1.62 ATOM 135 CB SER 10 -16.185 34.808 17.636 1.00 1.62 ATOM 138 OG SER 10 -15.512 33.555 17.615 1.00 1.62 ATOM 140 C SER 10 -17.308 36.500 16.189 1.00 1.62 ATOM 141 O SER 10 -16.973 37.587 16.648 1.00 1.62 ATOM 142 N SER 11 -18.521 36.285 15.637 1.00 1.85 ATOM 144 CA SER 11 -19.480 37.313 15.300 1.00 1.85 ATOM 146 CB SER 11 -20.651 36.746 14.462 1.00 1.85 ATOM 149 OG SER 11 -20.177 36.252 13.213 1.00 1.85 ATOM 151 C SER 11 -20.048 38.023 16.499 1.00 1.85 ATOM 152 O SER 11 -20.395 39.200 16.427 1.00 1.85 ATOM 153 N TYR 12 -20.140 37.315 17.639 1.00 2.03 ATOM 155 CA TYR 12 -20.680 37.823 18.874 1.00 2.03 ATOM 157 CB TYR 12 -20.932 36.612 19.820 1.00 2.03 ATOM 160 CG TYR 12 -21.527 36.974 21.157 1.00 2.03 ATOM 161 CD1 TYR 12 -22.858 37.422 21.249 1.00 2.03 ATOM 163 CE1 TYR 12 -23.445 37.681 22.498 1.00 2.03 ATOM 165 CZ TYR 12 -22.708 37.469 23.674 1.00 2.03 ATOM 166 OH TYR 12 -23.293 37.716 24.934 1.00 2.03 ATOM 168 CE2 TYR 12 -21.393 36.991 23.599 1.00 2.03 ATOM 170 CD2 TYR 12 -20.814 36.737 22.348 1.00 2.03 ATOM 172 C TYR 12 -19.767 38.877 19.484 1.00 2.03 ATOM 173 O TYR 12 -20.237 39.914 19.949 1.00 2.03 ATOM 174 N VAL 13 -18.438 38.644 19.473 1.00 2.16 ATOM 176 CA VAL 13 -17.466 39.511 20.111 1.00 2.16 ATOM 178 CB VAL 13 -16.530 38.733 21.015 1.00 2.16 ATOM 180 CG1 VAL 13 -17.338 38.098 22.160 1.00 2.16 ATOM 184 CG2 VAL 13 -15.779 37.655 20.212 1.00 2.16 ATOM 188 C VAL 13 -16.633 40.290 19.117 1.00 2.16 ATOM 189 O VAL 13 -15.656 40.927 19.508 1.00 2.16 ATOM 190 N ALA 14 -16.991 40.267 17.810 1.00 2.35 ATOM 192 CA ALA 14 -16.199 40.838 16.733 1.00 2.35 ATOM 194 CB ALA 14 -16.863 40.634 15.355 1.00 2.35 ATOM 198 C ALA 14 -15.949 42.318 16.872 1.00 2.35 ATOM 199 O ALA 14 -14.876 42.793 16.511 1.00 2.35 ATOM 200 N GLU 15 -16.927 43.073 17.431 1.00 2.50 ATOM 202 CA GLU 15 -16.831 44.507 17.620 1.00 2.50 ATOM 204 CB GLU 15 -18.162 45.103 18.142 1.00 2.50 ATOM 207 CG GLU 15 -19.275 45.071 17.071 1.00 2.50 ATOM 210 CD GLU 15 -20.610 45.614 17.592 1.00 2.50 ATOM 211 OE1 GLU 15 -20.721 45.971 18.794 1.00 2.50 ATOM 212 OE2 GLU 15 -21.559 45.680 16.768 1.00 2.50 ATOM 213 C GLU 15 -15.716 44.866 18.577 1.00 2.50 ATOM 214 O GLU 15 -14.956 45.804 18.337 1.00 2.50 ATOM 215 N THR 16 -15.571 44.082 19.668 1.00 2.85 ATOM 217 CA THR 16 -14.525 44.241 20.657 1.00 2.85 ATOM 219 CB THR 16 -14.882 43.479 21.926 1.00 2.85 ATOM 221 CG2 THR 16 -13.779 43.619 22.998 1.00 2.85 ATOM 225 OG1 THR 16 -16.093 44.000 22.464 1.00 2.85 ATOM 227 C THR 16 -13.208 43.735 20.095 1.00 2.85 ATOM 228 O THR 16 -12.152 44.320 20.330 1.00 2.85 ATOM 229 N GLY 17 -13.261 42.631 19.312 1.00 3.59 ATOM 231 CA GLY 17 -12.103 41.974 18.748 1.00 3.59 ATOM 234 C GLY 17 -11.449 41.100 19.776 1.00 3.59 ATOM 235 O GLY 17 -10.225 41.055 19.885 1.00 3.59 ATOM 236 N GLN 18 -12.280 40.406 20.580 1.00 4.27 ATOM 238 CA GLN 18 -11.847 39.607 21.698 1.00 4.27 ATOM 240 CB GLN 18 -12.996 39.517 22.729 1.00 4.27 ATOM 243 CG GLN 18 -12.677 38.776 24.040 1.00 4.27 ATOM 246 CD GLN 18 -13.914 38.833 24.939 1.00 4.27 ATOM 247 OE1 GLN 18 -14.802 37.992 24.833 1.00 4.27 ATOM 248 NE2 GLN 18 -14.005 39.861 25.819 1.00 4.27 ATOM 251 C GLN 18 -11.430 38.232 21.229 1.00 4.27 ATOM 252 O GLN 18 -10.292 37.824 21.462 1.00 4.27 ATOM 253 N ASN 19 -12.334 37.485 20.544 1.00 4.85 ATOM 255 CA ASN 19 -12.048 36.123 20.147 1.00 4.85 ATOM 257 CB ASN 19 -13.089 35.090 20.679 1.00 4.85 ATOM 260 CG ASN 19 -12.779 33.640 20.264 1.00 4.85 ATOM 261 OD1 ASN 19 -11.659 33.283 19.907 1.00 4.85 ATOM 262 ND2 ASN 19 -13.805 32.759 20.336 1.00 4.85 ATOM 265 C ASN 19 -11.984 36.119 18.640 1.00 4.85 ATOM 266 O ASN 19 -12.989 36.236 17.932 1.00 4.85 ATOM 267 N TRP 20 -10.745 35.951 18.144 1.00 5.86 ATOM 269 CA TRP 20 -10.450 35.709 16.768 1.00 5.86 ATOM 271 CB TRP 20 -9.385 36.669 16.173 1.00 5.86 ATOM 274 CG TRP 20 -9.745 38.138 16.191 1.00 5.86 ATOM 275 CD1 TRP 20 -9.375 39.049 17.138 1.00 5.86 ATOM 277 NE1 TRP 20 -9.880 40.287 16.834 1.00 5.86 ATOM 279 CE2 TRP 20 -10.688 40.173 15.728 1.00 5.86 ATOM 280 CZ2 TRP 20 -11.479 41.110 15.073 1.00 5.86 ATOM 282 CH2 TRP 20 -12.244 40.673 13.984 1.00 5.86 ATOM 284 CZ3 TRP 20 -12.181 39.338 13.541 1.00 5.86 ATOM 286 CE3 TRP 20 -11.361 38.401 14.189 1.00 5.86 ATOM 288 CD2 TRP 20 -10.637 38.829 15.297 1.00 5.86 ATOM 289 C TRP 20 -9.750 34.388 16.866 1.00 5.86 ATOM 290 O TRP 20 -8.824 34.249 17.667 1.00 5.86 ATOM 291 N ALA 21 -10.129 33.388 16.040 1.00 6.81 ATOM 293 CA ALA 21 -9.349 32.181 15.921 1.00 6.81 ATOM 295 CB ALA 21 -10.103 30.958 15.378 1.00 6.81 ATOM 299 C ALA 21 -8.228 32.525 14.988 1.00 6.81 ATOM 300 O ALA 21 -8.401 32.647 13.772 1.00 6.81 ATOM 301 N SER 22 -7.064 32.752 15.627 1.00 7.53 ATOM 303 CA SER 22 -5.857 33.226 15.024 1.00 7.53 ATOM 305 CB SER 22 -5.050 34.147 15.976 1.00 7.53 ATOM 308 OG SER 22 -5.797 35.314 16.296 1.00 7.53 ATOM 310 C SER 22 -5.010 32.031 14.743 1.00 7.53 ATOM 311 O SER 22 -4.705 31.259 15.651 1.00 7.53 ATOM 312 N LEU 23 -4.587 31.853 13.476 1.00 8.12 ATOM 314 CA LEU 23 -3.584 30.867 13.166 1.00 8.12 ATOM 316 CB LEU 23 -3.771 30.158 11.800 1.00 8.12 ATOM 319 CG LEU 23 -2.691 29.079 11.500 1.00 8.12 ATOM 321 CD1 LEU 23 -2.769 27.877 12.461 1.00 8.12 ATOM 325 CD2 LEU 23 -2.720 28.596 10.049 1.00 8.12 ATOM 329 C LEU 23 -2.287 31.625 13.169 1.00 8.12 ATOM 330 O LEU 23 -2.194 32.711 12.597 1.00 8.12 ATOM 331 N ALA 24 -1.241 31.070 13.823 1.00 7.84 ATOM 333 CA ALA 24 0.078 31.648 13.782 1.00 7.84 ATOM 335 CB ALA 24 1.010 31.054 14.855 1.00 7.84 ATOM 339 C ALA 24 0.672 31.402 12.419 1.00 7.84 ATOM 340 O ALA 24 0.761 30.262 11.964 1.00 7.84 ATOM 341 N ALA 25 1.037 32.492 11.719 1.00 7.03 ATOM 343 CA ALA 25 1.520 32.390 10.370 1.00 7.03 ATOM 345 CB ALA 25 0.374 32.370 9.338 1.00 7.03 ATOM 349 C ALA 25 2.418 33.561 10.114 1.00 7.03 ATOM 350 O ALA 25 2.389 34.560 10.835 1.00 7.03 ATOM 351 N ASN 26 3.254 33.433 9.057 1.00 6.04 ATOM 353 CA ASN 26 4.314 34.347 8.706 1.00 6.04 ATOM 355 CB ASN 26 5.111 33.803 7.477 1.00 6.04 ATOM 358 CG ASN 26 6.373 34.618 7.133 1.00 6.04 ATOM 359 OD1 ASN 26 6.280 35.760 6.689 1.00 6.04 ATOM 360 ND2 ASN 26 7.584 34.043 7.330 1.00 6.04 ATOM 363 C ASN 26 3.768 35.721 8.424 1.00 6.04 ATOM 364 O ASN 26 3.020 35.930 7.470 1.00 6.04 ATOM 365 N GLU 27 4.160 36.671 9.305 1.00 4.97 ATOM 367 CA GLU 27 3.968 38.097 9.230 1.00 4.97 ATOM 369 CB GLU 27 4.974 38.671 8.216 1.00 4.97 ATOM 372 CG GLU 27 6.460 38.508 8.629 1.00 4.97 ATOM 375 CD GLU 27 6.792 39.288 9.895 1.00 4.97 ATOM 376 OE1 GLU 27 6.507 40.510 9.912 1.00 4.97 ATOM 377 OE2 GLU 27 7.318 38.687 10.869 1.00 4.97 ATOM 378 C GLU 27 2.528 38.525 8.987 1.00 4.97 ATOM 379 O GLU 27 2.254 39.577 8.409 1.00 4.97 ATOM 380 N LEU 28 1.567 37.714 9.491 1.00 4.03 ATOM 382 CA LEU 28 0.169 38.049 9.533 1.00 4.03 ATOM 384 CB LEU 28 -0.760 36.873 9.152 1.00 4.03 ATOM 387 CG LEU 28 -0.562 36.339 7.715 1.00 4.03 ATOM 389 CD1 LEU 28 -1.470 35.135 7.421 1.00 4.03 ATOM 393 CD2 LEU 28 -0.766 37.422 6.646 1.00 4.03 ATOM 397 C LEU 28 -0.100 38.449 10.948 1.00 4.03 ATOM 398 O LEU 28 0.053 37.637 11.859 1.00 4.03 ATOM 399 N ARG 29 -0.474 39.729 11.164 1.00 3.30 ATOM 401 CA ARG 29 -0.661 40.271 12.491 1.00 3.30 ATOM 403 CB ARG 29 0.207 41.516 12.807 1.00 3.30 ATOM 406 CG ARG 29 1.713 41.216 12.843 1.00 3.30 ATOM 409 CD ARG 29 2.568 42.442 13.214 1.00 3.30 ATOM 412 NE ARG 29 3.971 41.984 13.471 1.00 3.30 ATOM 414 CZ ARG 29 4.917 41.882 12.503 1.00 3.30 ATOM 415 NH1 ARG 29 4.716 42.299 11.232 1.00 3.30 ATOM 418 NH2 ARG 29 6.098 41.298 12.801 1.00 3.30 ATOM 421 C ARG 29 -2.114 40.567 12.755 1.00 3.30 ATOM 422 O ARG 29 -2.879 40.952 11.869 1.00 3.30 ATOM 423 N VAL 30 -2.511 40.357 14.029 1.00 2.95 ATOM 425 CA VAL 30 -3.848 40.537 14.530 1.00 2.95 ATOM 427 CB VAL 30 -4.255 39.386 15.437 1.00 2.95 ATOM 429 CG1 VAL 30 -5.700 39.570 15.964 1.00 2.95 ATOM 433 CG2 VAL 30 -4.003 38.070 14.684 1.00 2.95 ATOM 437 C VAL 30 -3.771 41.771 15.382 1.00 2.95 ATOM 438 O VAL 30 -2.943 41.827 16.292 1.00 2.95 ATOM 439 N THR 31 -4.626 42.788 15.131 1.00 2.86 ATOM 441 CA THR 31 -4.745 43.907 16.047 1.00 2.86 ATOM 443 CB THR 31 -4.197 45.240 15.541 1.00 2.86 ATOM 445 CG2 THR 31 -2.711 45.078 15.153 1.00 2.86 ATOM 449 OG1 THR 31 -4.897 45.738 14.414 1.00 2.86 ATOM 451 C THR 31 -6.206 43.950 16.422 1.00 2.86 ATOM 452 O THR 31 -6.911 42.949 16.292 1.00 2.86 ATOM 453 N GLU 32 -6.708 45.092 16.942 1.00 2.86 ATOM 455 CA GLU 32 -8.066 45.161 17.430 1.00 2.86 ATOM 457 CB GLU 32 -8.275 46.288 18.465 1.00 2.86 ATOM 460 CG GLU 32 -7.531 45.967 19.784 1.00 2.86 ATOM 463 CD GLU 32 -7.666 47.082 20.820 1.00 2.86 ATOM 464 OE1 GLU 32 -8.330 48.114 20.545 1.00 2.86 ATOM 465 OE2 GLU 32 -7.085 46.912 21.923 1.00 2.86 ATOM 466 C GLU 32 -9.069 45.214 16.299 1.00 2.86 ATOM 467 O GLU 32 -10.003 44.415 16.290 1.00 2.86 ATOM 468 N ARG 33 -8.886 46.116 15.302 1.00 2.88 ATOM 470 CA ARG 33 -9.725 46.131 14.115 1.00 2.88 ATOM 472 CB ARG 33 -10.393 47.493 13.765 1.00 2.88 ATOM 475 CG ARG 33 -11.456 47.959 14.771 1.00 2.88 ATOM 478 CD ARG 33 -12.131 49.275 14.359 1.00 2.88 ATOM 481 NE ARG 33 -11.132 50.385 14.488 1.00 2.88 ATOM 483 CZ ARG 33 -11.348 51.626 13.982 1.00 2.88 ATOM 484 NH1 ARG 33 -12.495 51.948 13.343 1.00 2.88 ATOM 487 NH2 ARG 33 -10.394 52.573 14.113 1.00 2.88 ATOM 490 C ARG 33 -8.996 45.562 12.917 1.00 2.88 ATOM 491 O ARG 33 -9.504 44.570 12.389 1.00 2.88 ATOM 492 N PRO 34 -7.874 46.077 12.391 1.00 2.94 ATOM 493 CA PRO 34 -7.308 45.527 11.177 1.00 2.94 ATOM 495 CB PRO 34 -6.453 46.659 10.589 1.00 2.94 ATOM 498 CG PRO 34 -6.032 47.487 11.801 1.00 2.94 ATOM 501 CD PRO 34 -7.256 47.368 12.722 1.00 2.94 ATOM 504 C PRO 34 -6.534 44.253 11.376 1.00 2.94 ATOM 505 O PRO 34 -5.855 44.073 12.384 1.00 2.94 ATOM 506 N PHE 35 -6.611 43.371 10.362 1.00 3.09 ATOM 508 CA PHE 35 -5.634 42.338 10.125 1.00 3.09 ATOM 510 CB PHE 35 -6.228 41.027 9.587 1.00 3.09 ATOM 513 CG PHE 35 -6.925 40.365 10.724 1.00 3.09 ATOM 514 CD1 PHE 35 -8.256 40.673 11.041 1.00 3.09 ATOM 516 CE1 PHE 35 -8.881 40.050 12.126 1.00 3.09 ATOM 518 CZ PHE 35 -8.195 39.091 12.873 1.00 3.09 ATOM 520 CE2 PHE 35 -6.879 38.769 12.557 1.00 3.09 ATOM 522 CD2 PHE 35 -6.235 39.410 11.493 1.00 3.09 ATOM 524 C PHE 35 -4.629 42.853 9.154 1.00 3.09 ATOM 525 O PHE 35 -4.963 43.371 8.092 1.00 3.09 ATOM 526 N TRP 36 -3.351 42.733 9.543 1.00 3.43 ATOM 528 CA TRP 36 -2.234 43.229 8.790 1.00 3.43 ATOM 530 CB TRP 36 -1.155 43.873 9.696 1.00 3.43 ATOM 533 CG TRP 36 -1.545 45.162 10.404 1.00 3.43 ATOM 534 CD1 TRP 36 -2.640 45.963 10.235 1.00 3.43 ATOM 536 NE1 TRP 36 -2.606 47.019 11.120 1.00 3.43 ATOM 538 CE2 TRP 36 -1.497 46.883 11.923 1.00 3.43 ATOM 539 CZ2 TRP 36 -1.024 47.659 12.979 1.00 3.43 ATOM 541 CH2 TRP 36 0.143 47.234 13.637 1.00 3.43 ATOM 543 CZ3 TRP 36 0.820 46.074 13.227 1.00 3.43 ATOM 545 CE3 TRP 36 0.361 45.316 12.139 1.00 3.43 ATOM 547 CD2 TRP 36 -0.808 45.724 11.504 1.00 3.43 ATOM 548 C TRP 36 -1.608 42.072 8.058 1.00 3.43 ATOM 549 O TRP 36 -1.229 41.083 8.680 1.00 3.43 ATOM 550 N ILE 37 -1.463 42.187 6.714 1.00 3.97 ATOM 552 CA ILE 37 -0.622 41.293 5.939 1.00 3.97 ATOM 554 CB ILE 37 -1.097 40.933 4.529 1.00 3.97 ATOM 556 CG2 ILE 37 -0.038 40.018 3.858 1.00 3.97 ATOM 560 CG1 ILE 37 -2.470 40.243 4.511 1.00 3.97 ATOM 563 CD1 ILE 37 -2.998 40.044 3.082 1.00 3.97 ATOM 567 C ILE 37 0.646 42.073 5.760 1.00 3.97 ATOM 568 O ILE 37 0.676 43.037 4.996 1.00 3.97 ATOM 569 N SER 38 1.728 41.692 6.462 1.00 4.44 ATOM 571 CA SER 38 2.965 42.430 6.374 1.00 4.44 ATOM 573 CB SER 38 3.710 42.470 7.727 1.00 4.44 ATOM 576 OG SER 38 2.928 43.146 8.706 1.00 4.44 ATOM 578 C SER 38 3.810 41.870 5.249 1.00 4.44 ATOM 579 O SER 38 4.116 42.585 4.296 1.00 4.44 ATOM 580 N SER 39 4.173 40.565 5.287 1.00 4.79 ATOM 582 CA SER 39 4.968 39.945 4.238 1.00 4.79 ATOM 584 CB SER 39 5.841 38.786 4.782 1.00 4.79 ATOM 587 OG SER 39 6.643 38.163 3.787 1.00 4.79 ATOM 589 C SER 39 4.019 39.410 3.194 1.00 4.79 ATOM 590 O SER 39 2.927 38.957 3.531 1.00 4.79 ATOM 591 N PHE 40 4.424 39.444 1.902 1.00 5.25 ATOM 593 CA PHE 40 3.654 38.898 0.811 1.00 5.25 ATOM 595 CB PHE 40 3.292 39.926 -0.302 1.00 5.25 ATOM 598 CG PHE 40 2.318 40.965 0.192 1.00 5.25 ATOM 599 CD1 PHE 40 2.704 42.278 0.521 1.00 5.25 ATOM 601 CE1 PHE 40 1.743 43.233 0.893 1.00 5.25 ATOM 603 CZ PHE 40 0.386 42.883 0.946 1.00 5.25 ATOM 605 CE2 PHE 40 -0.013 41.576 0.632 1.00 5.25 ATOM 607 CD2 PHE 40 0.953 40.627 0.269 1.00 5.25 ATOM 609 C PHE 40 4.374 37.690 0.263 1.00 5.25 ATOM 610 O PHE 40 4.633 36.737 0.996 1.00 5.25 ATOM 611 N ILE 41 4.655 37.678 -1.061 1.00 6.18 ATOM 613 CA ILE 41 5.066 36.517 -1.811 1.00 6.18 ATOM 615 CB ILE 41 3.968 36.149 -2.800 1.00 6.18 ATOM 617 CG2 ILE 41 4.422 35.094 -3.822 1.00 6.18 ATOM 621 CG1 ILE 41 2.681 35.735 -2.029 1.00 6.18 ATOM 624 CD1 ILE 41 1.452 35.552 -2.909 1.00 6.18 ATOM 628 C ILE 41 6.384 36.814 -2.482 1.00 6.18 ATOM 629 O ILE 41 6.627 37.935 -2.927 1.00 6.18 ATOM 630 N GLY 42 7.267 35.784 -2.550 1.00 7.28 ATOM 632 CA GLY 42 8.548 35.828 -3.214 1.00 7.28 ATOM 635 C GLY 42 8.556 34.741 -4.247 1.00 7.28 ATOM 636 O GLY 42 8.491 33.563 -3.905 1.00 7.28 ATOM 637 N ARG 43 8.640 35.125 -5.542 1.00 8.01 ATOM 639 CA ARG 43 8.572 34.278 -6.721 1.00 8.01 ATOM 641 CB ARG 43 9.884 33.521 -7.050 1.00 8.01 ATOM 644 CG ARG 43 11.033 34.472 -7.402 1.00 8.01 ATOM 647 CD ARG 43 12.298 33.723 -7.840 1.00 8.01 ATOM 650 NE ARG 43 13.361 34.727 -8.175 1.00 8.01 ATOM 652 CZ ARG 43 14.257 35.199 -7.267 1.00 8.01 ATOM 653 NH1 ARG 43 14.324 34.735 -5.997 1.00 8.01 ATOM 656 NH2 ARG 43 15.123 36.162 -7.645 1.00 8.01 ATOM 659 C ARG 43 7.336 33.395 -6.768 1.00 8.01 ATOM 660 O ARG 43 6.219 33.894 -6.611 1.00 8.01 ATOM 661 N SER 44 7.506 32.072 -7.024 1.00 8.37 ATOM 663 CA SER 44 6.408 31.159 -7.249 1.00 8.37 ATOM 665 CB SER 44 6.785 30.060 -8.280 1.00 8.37 ATOM 668 OG SER 44 5.676 29.232 -8.618 1.00 8.37 ATOM 670 C SER 44 6.016 30.532 -5.936 1.00 8.37 ATOM 671 O SER 44 6.449 29.429 -5.607 1.00 8.37 ATOM 672 N LYS 45 5.180 31.244 -5.154 1.00 7.89 ATOM 674 CA LYS 45 4.654 30.763 -3.897 1.00 7.89 ATOM 676 CB LYS 45 5.437 31.300 -2.662 1.00 7.89 ATOM 679 CG LYS 45 6.889 30.806 -2.563 1.00 7.89 ATOM 682 CD LYS 45 7.640 31.313 -1.324 1.00 7.89 ATOM 685 CE LYS 45 9.090 30.811 -1.276 1.00 7.89 ATOM 688 NZ LYS 45 9.826 31.387 -0.129 1.00 7.89 ATOM 692 C LYS 45 3.249 31.295 -3.843 1.00 7.89 ATOM 693 O LYS 45 2.991 32.379 -4.352 1.00 7.89 TER END