####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS222_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS222_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 21 - 41 4.95 14.89 LONGEST_CONTINUOUS_SEGMENT: 21 22 - 42 4.84 15.12 LCS_AVERAGE: 40.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 13 - 20 1.68 25.25 LONGEST_CONTINUOUS_SEGMENT: 8 31 - 38 1.94 15.23 LCS_AVERAGE: 14.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 2 - 6 0.75 16.64 LONGEST_CONTINUOUS_SEGMENT: 5 10 - 14 0.83 27.48 LONGEST_CONTINUOUS_SEGMENT: 5 13 - 17 0.64 27.47 LONGEST_CONTINUOUS_SEGMENT: 5 14 - 18 0.86 25.03 LCS_AVERAGE: 9.19 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 6 8 3 4 5 5 6 8 8 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT V 3 V 3 5 6 8 3 4 5 5 6 8 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT Q 4 Q 4 5 6 8 3 4 5 5 6 8 10 11 13 14 16 20 21 24 25 26 28 30 32 32 LCS_GDT G 5 G 5 5 6 14 3 4 5 5 6 7 8 9 10 12 13 16 18 22 24 26 28 30 32 32 LCS_GDT P 6 P 6 5 6 16 1 4 5 5 6 7 8 9 9 11 13 16 18 22 23 26 27 30 32 32 LCS_GDT W 7 W 7 4 6 16 0 3 4 4 4 5 7 8 9 10 12 16 18 22 24 26 28 30 32 32 LCS_GDT V 8 V 8 4 4 16 3 3 4 4 4 6 7 9 10 11 14 16 18 22 24 26 28 30 32 32 LCS_GDT G 9 G 9 4 6 16 3 3 4 4 6 7 9 11 13 14 14 16 18 22 24 26 28 29 32 32 LCS_GDT S 10 S 10 5 6 16 3 4 5 5 5 8 9 11 13 14 14 15 16 18 19 21 24 26 29 31 LCS_GDT S 11 S 11 5 6 16 3 4 5 5 6 8 9 11 13 14 14 15 15 16 17 19 21 22 23 25 LCS_GDT Y 12 Y 12 5 7 16 3 4 5 5 5 8 9 11 13 14 14 15 15 16 17 18 21 21 22 25 LCS_GDT V 13 V 13 5 8 16 4 5 5 7 7 8 9 11 13 14 14 15 15 16 18 19 21 22 23 26 LCS_GDT A 14 A 14 5 8 16 4 5 5 7 7 8 9 11 13 14 14 15 15 16 17 19 21 22 22 25 LCS_GDT E 15 E 15 5 8 16 4 5 5 7 7 8 9 11 13 14 14 15 15 16 17 18 21 21 22 24 LCS_GDT T 16 T 16 5 8 16 4 5 5 7 7 8 9 11 13 14 14 15 15 16 17 19 21 22 23 25 LCS_GDT G 17 G 17 5 8 16 3 5 5 7 7 8 9 11 13 14 14 15 15 16 18 20 21 22 23 25 LCS_GDT Q 18 Q 18 5 8 16 3 5 5 7 7 8 9 11 13 14 14 15 16 18 21 22 24 26 29 32 LCS_GDT N 19 N 19 4 8 16 4 4 5 7 7 8 9 11 13 14 14 16 18 22 24 26 28 30 32 32 LCS_GDT W 20 W 20 4 8 18 4 5 5 6 7 8 9 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT A 21 A 21 4 6 21 4 4 5 6 6 8 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT S 22 S 22 4 6 21 4 4 4 5 6 8 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT L 23 L 23 3 3 21 3 3 3 3 4 7 9 9 12 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT A 24 A 24 3 4 21 3 3 3 5 5 8 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT A 25 A 25 3 5 21 3 3 4 4 4 5 5 8 11 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT N 26 N 26 3 5 21 3 3 4 4 4 5 6 8 9 14 16 18 21 22 23 26 28 30 32 32 LCS_GDT E 27 E 27 3 6 21 3 3 4 4 6 6 9 9 12 13 15 18 22 24 25 26 28 30 32 32 LCS_GDT L 28 L 28 3 6 21 3 3 4 6 6 8 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT R 29 R 29 4 6 21 3 4 5 6 6 8 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT V 30 V 30 4 6 21 3 4 5 6 7 9 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT T 31 T 31 4 8 21 3 4 5 6 6 9 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT E 32 E 32 4 8 21 3 4 5 6 7 9 9 10 12 13 16 18 20 24 25 25 27 30 32 32 LCS_GDT R 33 R 33 3 8 21 3 4 5 5 7 9 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT P 34 P 34 4 8 21 3 4 5 5 7 9 9 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT F 35 F 35 4 8 21 3 4 5 5 7 9 10 11 13 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT W 36 W 36 4 8 21 3 4 5 5 7 9 9 9 12 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT I 37 I 37 4 8 21 3 4 5 5 7 9 9 9 12 14 16 20 22 24 25 26 28 30 32 32 LCS_GDT S 38 S 38 4 8 21 3 4 5 5 7 9 9 9 12 13 16 18 20 22 25 25 26 28 32 32 LCS_GDT S 39 S 39 4 5 21 3 3 4 4 5 6 8 9 11 13 16 20 22 24 25 26 28 30 32 32 LCS_GDT F 40 F 40 4 5 21 3 3 4 4 5 6 8 9 11 14 16 18 22 24 25 25 28 30 32 32 LCS_GDT I 41 I 41 3 4 21 3 3 3 3 4 6 8 9 11 14 16 20 22 24 25 25 28 30 32 32 LCS_GDT G 42 G 42 3 4 21 3 3 3 4 5 6 8 9 10 14 16 19 22 24 25 25 26 30 32 32 LCS_GDT R 43 R 43 3 4 13 3 3 3 3 3 4 7 8 9 10 10 14 15 15 16 19 22 23 29 30 LCS_GDT S 44 S 44 3 4 13 3 3 3 4 5 6 7 9 10 11 12 14 15 15 18 20 22 26 29 31 LCS_GDT K 45 K 45 3 3 13 0 3 3 3 3 7 8 9 10 11 12 14 15 15 19 21 24 26 29 31 LCS_AVERAGE LCS_A: 21.25 ( 9.19 14.20 40.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 4 5 5 7 7 9 10 11 13 14 16 20 22 24 25 26 28 30 32 32 GDT PERCENT_AT 9.09 11.36 11.36 15.91 15.91 20.45 22.73 25.00 29.55 31.82 36.36 45.45 50.00 54.55 56.82 59.09 63.64 68.18 72.73 72.73 GDT RMS_LOCAL 0.20 0.64 0.64 1.35 1.35 2.06 2.68 2.65 3.02 3.33 4.00 4.65 4.89 5.13 5.29 6.05 6.28 6.42 6.68 6.68 GDT RMS_ALL_AT 28.45 27.47 27.47 26.45 26.45 14.94 13.03 23.73 23.36 22.26 15.63 12.66 13.24 13.02 13.08 11.35 11.47 11.87 11.64 11.64 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 37.095 0 0.170 0.236 39.070 0.000 0.000 - LGA V 3 V 3 30.523 0 0.143 0.184 32.793 0.000 0.000 26.956 LGA Q 4 Q 4 28.459 0 0.115 1.234 31.889 0.000 0.000 31.889 LGA G 5 G 5 23.747 0 0.252 0.252 25.414 0.000 0.000 - LGA P 6 P 6 19.262 0 0.661 0.578 23.537 0.000 0.000 21.773 LGA W 7 W 7 15.414 0 0.358 0.387 21.968 0.000 0.000 21.028 LGA V 8 V 8 9.964 0 0.665 0.695 11.966 0.000 0.000 6.813 LGA G 9 G 9 5.188 0 0.565 0.565 6.788 5.909 5.909 - LGA S 10 S 10 5.115 0 0.617 0.682 9.342 5.455 3.636 9.342 LGA S 11 S 11 3.442 0 0.023 0.660 7.213 23.182 16.364 7.213 LGA Y 12 Y 12 3.084 0 0.068 1.107 14.154 22.273 8.333 14.154 LGA V 13 V 13 3.940 0 0.531 1.323 8.367 31.818 18.182 8.367 LGA A 14 A 14 0.772 0 0.011 0.017 1.969 62.273 62.909 - LGA E 15 E 15 2.914 0 0.038 1.194 4.439 30.455 24.444 1.929 LGA T 16 T 16 1.153 0 0.157 1.143 3.150 65.909 54.545 3.150 LGA G 17 G 17 1.290 0 0.525 0.525 3.287 57.727 57.727 - LGA Q 18 Q 18 1.272 0 0.230 0.355 7.352 48.182 23.434 5.125 LGA N 19 N 19 3.801 0 0.530 1.323 9.743 28.636 14.318 9.146 LGA W 20 W 20 1.207 0 0.052 0.777 7.861 52.273 16.623 7.750 LGA A 21 A 21 3.278 0 0.609 0.557 7.361 17.273 19.273 - LGA S 22 S 22 6.997 0 0.621 0.684 8.732 0.455 0.303 5.741 LGA L 23 L 23 11.469 0 0.652 1.380 14.711 0.000 0.000 12.937 LGA A 24 A 24 16.069 0 0.609 0.575 19.741 0.000 0.000 - LGA A 25 A 25 19.851 0 0.596 0.594 22.370 0.000 0.000 - LGA N 26 N 26 23.947 0 0.604 0.859 26.762 0.000 0.000 25.020 LGA E 27 E 27 25.462 0 0.317 0.245 27.715 0.000 0.000 23.593 LGA L 28 L 28 25.213 0 0.571 0.535 26.900 0.000 0.000 23.862 LGA R 29 R 29 24.357 0 0.536 1.640 33.359 0.000 0.000 33.359 LGA V 30 V 30 21.257 0 0.044 0.085 21.668 0.000 0.000 18.848 LGA T 31 T 31 23.684 0 0.669 0.605 28.336 0.000 0.000 28.336 LGA E 32 E 32 25.377 0 0.581 0.947 29.597 0.000 0.000 29.597 LGA R 33 R 33 25.981 0 0.593 1.380 27.285 0.000 0.000 24.555 LGA P 34 P 34 25.784 0 0.102 0.121 29.255 0.000 0.000 29.126 LGA F 35 F 35 23.041 0 0.149 1.245 23.801 0.000 0.000 17.212 LGA W 36 W 36 26.038 0 0.025 0.923 32.876 0.000 0.000 32.398 LGA I 37 I 37 24.945 0 0.571 1.421 28.610 0.000 0.000 21.001 LGA S 38 S 38 31.257 0 0.174 0.685 34.600 0.000 0.000 32.513 LGA S 39 S 39 33.055 0 0.640 0.819 33.055 0.000 0.000 31.396 LGA F 40 F 40 33.475 0 0.625 0.873 36.718 0.000 0.000 27.404 LGA I 41 I 41 37.556 0 0.032 0.056 41.588 0.000 0.000 33.657 LGA G 42 G 42 44.423 0 0.530 0.530 46.039 0.000 0.000 - LGA R 43 R 43 45.002 0 0.438 1.252 52.583 0.000 0.000 52.583 LGA S 44 S 44 44.370 0 0.696 0.615 48.307 0.000 0.000 48.307 LGA K 45 K 45 39.855 0 0.038 0.776 41.811 0.000 0.000 35.885 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.399 10.291 11.402 10.269 7.409 1.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 2.65 27.841 24.185 0.400 LGA_LOCAL RMSD: 2.650 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 23.735 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.399 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.703781 * X + -0.434454 * Y + 0.562087 * Z + 42.102825 Y_new = 0.683448 * X + -0.198124 * Y + 0.702600 * Z + -3.264334 Z_new = -0.193884 * X + 0.878634 * Y + 0.436362 * Z + -43.749908 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.370851 0.195120 1.109843 [DEG: 135.8398 11.1795 63.5893 ] ZXZ: 2.466845 1.119245 -0.217185 [DEG: 141.3398 64.1280 -12.4438 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS222_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS222_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 2.65 24.185 10.40 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS222_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 -23.159 30.630 -3.656 1.00 1.46 ATOM 22 CA ALA 2 -21.851 31.164 -3.941 1.00 1.46 ATOM 24 CB ALA 2 -21.891 32.655 -4.347 1.00 1.46 ATOM 28 C ALA 2 -21.019 31.027 -2.698 1.00 1.46 ATOM 29 O ALA 2 -21.289 31.678 -1.690 1.00 1.46 ATOM 30 N VAL 3 -19.983 30.164 -2.746 1.00 1.46 ATOM 32 CA VAL 3 -19.091 29.967 -1.624 1.00 1.46 ATOM 34 CB VAL 3 -18.848 28.514 -1.251 1.00 1.46 ATOM 36 CG1 VAL 3 -17.888 28.410 -0.037 1.00 1.46 ATOM 40 CG2 VAL 3 -20.196 27.830 -0.952 1.00 1.46 ATOM 44 C VAL 3 -17.798 30.592 -2.049 1.00 1.46 ATOM 45 O VAL 3 -17.013 29.995 -2.781 1.00 1.46 ATOM 46 N GLN 4 -17.567 31.830 -1.583 1.00 1.40 ATOM 48 CA GLN 4 -16.380 32.601 -1.848 1.00 1.40 ATOM 50 CB GLN 4 -16.758 34.072 -2.160 1.00 1.40 ATOM 53 CG GLN 4 -15.583 35.045 -2.389 1.00 1.40 ATOM 56 CD GLN 4 -14.827 34.692 -3.669 1.00 1.40 ATOM 57 OE1 GLN 4 -15.421 34.595 -4.740 1.00 1.40 ATOM 58 NE2 GLN 4 -13.488 34.505 -3.584 1.00 1.40 ATOM 61 C GLN 4 -15.546 32.562 -0.595 1.00 1.40 ATOM 62 O GLN 4 -15.992 33.029 0.451 1.00 1.40 ATOM 63 N GLY 5 -14.323 31.991 -0.660 1.00 1.40 ATOM 65 CA GLY 5 -13.496 31.842 0.525 1.00 1.40 ATOM 68 C GLY 5 -12.080 32.303 0.299 1.00 1.40 ATOM 69 O GLY 5 -11.361 31.589 -0.391 1.00 1.40 ATOM 70 N PRO 6 -11.586 33.436 0.806 1.00 1.40 ATOM 71 CA PRO 6 -10.161 33.741 0.848 1.00 1.40 ATOM 73 CB PRO 6 -10.105 35.268 1.030 1.00 1.40 ATOM 76 CG PRO 6 -11.407 35.619 1.776 1.00 1.40 ATOM 79 CD PRO 6 -12.401 34.533 1.325 1.00 1.40 ATOM 82 C PRO 6 -9.494 33.045 2.019 1.00 1.40 ATOM 83 O PRO 6 -9.992 33.140 3.138 1.00 1.40 ATOM 84 N TRP 7 -8.360 32.352 1.785 1.00 1.41 ATOM 86 CA TRP 7 -7.691 31.550 2.777 1.00 1.41 ATOM 88 CB TRP 7 -7.764 30.030 2.453 1.00 1.41 ATOM 91 CG TRP 7 -9.168 29.432 2.362 1.00 1.41 ATOM 92 CD1 TRP 7 -9.932 29.332 1.232 1.00 1.41 ATOM 94 NE1 TRP 7 -11.157 28.771 1.517 1.00 1.41 ATOM 96 CE2 TRP 7 -11.186 28.454 2.855 1.00 1.41 ATOM 97 CZ2 TRP 7 -12.180 27.873 3.634 1.00 1.41 ATOM 99 CH2 TRP 7 -11.904 27.635 4.986 1.00 1.41 ATOM 101 CZ3 TRP 7 -10.660 27.983 5.537 1.00 1.41 ATOM 103 CE3 TRP 7 -9.660 28.590 4.759 1.00 1.41 ATOM 105 CD2 TRP 7 -9.940 28.825 3.416 1.00 1.41 ATOM 106 C TRP 7 -6.238 31.963 2.716 1.00 1.41 ATOM 107 O TRP 7 -5.637 32.018 1.642 1.00 1.41 ATOM 108 N VAL 8 -5.636 32.284 3.881 1.00 1.48 ATOM 110 CA VAL 8 -4.263 32.750 3.930 1.00 1.48 ATOM 112 CB VAL 8 -4.134 34.163 4.492 1.00 1.48 ATOM 114 CG1 VAL 8 -2.644 34.585 4.514 1.00 1.48 ATOM 118 CG2 VAL 8 -5.043 35.142 3.710 1.00 1.48 ATOM 122 C VAL 8 -3.548 31.805 4.853 1.00 1.48 ATOM 123 O VAL 8 -3.982 31.632 5.981 1.00 1.48 ATOM 124 N GLY 9 -2.432 31.178 4.421 1.00 1.59 ATOM 126 CA GLY 9 -1.614 30.355 5.298 1.00 1.59 ATOM 129 C GLY 9 -0.346 31.098 5.569 1.00 1.59 ATOM 130 O GLY 9 0.360 31.453 4.634 1.00 1.59 ATOM 131 N SER 10 0.014 31.368 6.846 1.00 1.71 ATOM 133 CA SER 10 1.178 32.196 7.105 1.00 1.71 ATOM 135 CB SER 10 1.174 32.835 8.505 1.00 1.71 ATOM 138 OG SER 10 0.101 33.765 8.619 1.00 1.71 ATOM 140 C SER 10 2.456 31.420 6.901 1.00 1.71 ATOM 141 O SER 10 2.712 30.413 7.559 1.00 1.71 ATOM 142 N SER 11 3.277 31.898 5.939 1.00 1.88 ATOM 144 CA SER 11 4.517 31.279 5.528 1.00 1.88 ATOM 146 CB SER 11 5.029 31.805 4.159 1.00 1.88 ATOM 149 OG SER 11 4.112 31.517 3.114 1.00 1.88 ATOM 151 C SER 11 5.601 31.591 6.523 1.00 1.88 ATOM 152 O SER 11 6.417 30.735 6.854 1.00 1.88 ATOM 153 N TYR 12 5.627 32.850 7.016 1.00 2.14 ATOM 155 CA TYR 12 6.666 33.374 7.873 1.00 2.14 ATOM 157 CB TYR 12 6.515 34.921 8.031 1.00 2.14 ATOM 160 CG TYR 12 7.579 35.547 8.909 1.00 2.14 ATOM 161 CD1 TYR 12 8.892 35.752 8.437 1.00 2.14 ATOM 163 CE1 TYR 12 9.874 36.321 9.267 1.00 2.14 ATOM 165 CZ TYR 12 9.547 36.700 10.579 1.00 2.14 ATOM 166 OH TYR 12 10.529 37.254 11.428 1.00 2.14 ATOM 168 CE2 TYR 12 8.240 36.524 11.052 1.00 2.14 ATOM 170 CD2 TYR 12 7.265 35.960 10.219 1.00 2.14 ATOM 172 C TYR 12 6.701 32.686 9.228 1.00 2.14 ATOM 173 O TYR 12 7.783 32.333 9.696 1.00 2.14 ATOM 174 N VAL 13 5.534 32.472 9.891 1.00 2.56 ATOM 176 CA VAL 13 5.503 31.911 11.231 1.00 2.56 ATOM 178 CB VAL 13 4.443 32.483 12.160 1.00 2.56 ATOM 180 CG1 VAL 13 4.767 33.968 12.416 1.00 2.56 ATOM 184 CG2 VAL 13 3.025 32.357 11.568 1.00 2.56 ATOM 188 C VAL 13 5.532 30.397 11.254 1.00 2.56 ATOM 189 O VAL 13 4.525 29.700 11.371 1.00 2.56 ATOM 190 N ALA 14 6.769 29.861 11.217 1.00 2.96 ATOM 192 CA ALA 14 7.085 28.466 11.396 1.00 2.96 ATOM 194 CB ALA 14 8.572 28.211 11.056 1.00 2.96 ATOM 198 C ALA 14 6.856 28.048 12.828 1.00 2.96 ATOM 199 O ALA 14 6.340 26.966 13.103 1.00 2.96 ATOM 200 N GLU 15 7.223 28.941 13.777 1.00 3.27 ATOM 202 CA GLU 15 7.157 28.720 15.202 1.00 3.27 ATOM 204 CB GLU 15 7.843 29.871 15.973 1.00 3.27 ATOM 207 CG GLU 15 9.371 29.882 15.766 1.00 3.27 ATOM 210 CD GLU 15 10.035 31.076 16.453 1.00 3.27 ATOM 211 OE1 GLU 15 9.333 31.939 17.041 1.00 3.27 ATOM 212 OE2 GLU 15 11.289 31.144 16.386 1.00 3.27 ATOM 213 C GLU 15 5.734 28.609 15.681 1.00 3.27 ATOM 214 O GLU 15 5.424 27.752 16.508 1.00 3.27 ATOM 215 N THR 16 4.820 29.458 15.149 1.00 3.54 ATOM 217 CA THR 16 3.416 29.405 15.507 1.00 3.54 ATOM 219 CB THR 16 2.657 30.664 15.133 1.00 3.54 ATOM 221 CG2 THR 16 1.179 30.528 15.564 1.00 3.54 ATOM 225 OG1 THR 16 3.214 31.777 15.821 1.00 3.54 ATOM 227 C THR 16 2.785 28.205 14.839 1.00 3.54 ATOM 228 O THR 16 2.009 27.483 15.462 1.00 3.54 ATOM 229 N GLY 17 3.145 27.939 13.560 1.00 3.71 ATOM 231 CA GLY 17 2.656 26.784 12.843 1.00 3.71 ATOM 234 C GLY 17 1.326 27.107 12.253 1.00 3.71 ATOM 235 O GLY 17 1.245 27.769 11.221 1.00 3.71 ATOM 236 N GLN 18 0.239 26.646 12.913 1.00 3.90 ATOM 238 CA GLN 18 -1.111 26.859 12.450 1.00 3.90 ATOM 240 CB GLN 18 -2.121 25.839 13.021 1.00 3.90 ATOM 243 CG GLN 18 -1.831 24.382 12.610 1.00 3.90 ATOM 246 CD GLN 18 -1.999 24.236 11.092 1.00 3.90 ATOM 247 OE1 GLN 18 -3.077 24.520 10.573 1.00 3.90 ATOM 248 NE2 GLN 18 -0.942 23.805 10.357 1.00 3.90 ATOM 251 C GLN 18 -1.578 28.245 12.784 1.00 3.90 ATOM 252 O GLN 18 -2.168 28.512 13.829 1.00 3.90 ATOM 253 N ASN 19 -1.311 29.155 11.834 1.00 4.31 ATOM 255 CA ASN 19 -1.772 30.507 11.838 1.00 4.31 ATOM 257 CB ASN 19 -0.638 31.486 12.229 1.00 4.31 ATOM 260 CG ASN 19 -1.125 32.925 12.400 1.00 4.31 ATOM 261 OD1 ASN 19 -2.316 33.219 12.476 1.00 4.31 ATOM 262 ND2 ASN 19 -0.153 33.853 12.572 1.00 4.31 ATOM 265 C ASN 19 -2.259 30.671 10.431 1.00 4.31 ATOM 266 O ASN 19 -1.627 31.300 9.582 1.00 4.31 ATOM 267 N TRP 20 -3.405 30.015 10.158 1.00 5.15 ATOM 269 CA TRP 20 -4.073 30.083 8.889 1.00 5.15 ATOM 271 CB TRP 20 -4.493 28.705 8.297 1.00 5.15 ATOM 274 CG TRP 20 -3.362 27.747 7.902 1.00 5.15 ATOM 275 CD1 TRP 20 -2.024 27.768 8.217 1.00 5.15 ATOM 277 NE1 TRP 20 -1.385 26.666 7.696 1.00 5.15 ATOM 279 CE2 TRP 20 -2.301 25.923 6.987 1.00 5.15 ATOM 280 CZ2 TRP 20 -2.160 24.733 6.284 1.00 5.15 ATOM 282 CH2 TRP 20 -3.297 24.205 5.652 1.00 5.15 ATOM 284 CZ3 TRP 20 -4.529 24.881 5.690 1.00 5.15 ATOM 286 CE3 TRP 20 -4.670 26.085 6.401 1.00 5.15 ATOM 288 CD2 TRP 20 -3.549 26.584 7.068 1.00 5.15 ATOM 289 C TRP 20 -5.289 30.922 9.142 1.00 5.15 ATOM 290 O TRP 20 -6.053 30.677 10.076 1.00 5.15 ATOM 291 N ALA 21 -5.489 31.955 8.294 1.00 6.23 ATOM 293 CA ALA 21 -6.654 32.787 8.326 1.00 6.23 ATOM 295 CB ALA 21 -6.467 34.187 7.719 1.00 6.23 ATOM 299 C ALA 21 -7.708 32.041 7.576 1.00 6.23 ATOM 300 O ALA 21 -7.672 31.902 6.350 1.00 6.23 ATOM 301 N SER 22 -8.633 31.499 8.388 1.00 8.38 ATOM 303 CA SER 22 -9.691 30.626 7.979 1.00 8.38 ATOM 305 CB SER 22 -9.904 29.460 8.976 1.00 8.38 ATOM 308 OG SER 22 -8.739 28.648 9.043 1.00 8.38 ATOM 310 C SER 22 -10.946 31.439 7.955 1.00 8.38 ATOM 311 O SER 22 -11.349 31.998 8.975 1.00 8.38 ATOM 312 N LEU 23 -11.613 31.513 6.782 1.00 10.47 ATOM 314 CA LEU 23 -12.956 32.040 6.714 1.00 10.47 ATOM 316 CB LEU 23 -13.363 32.618 5.324 1.00 10.47 ATOM 319 CG LEU 23 -14.770 33.290 5.291 1.00 10.47 ATOM 321 CD1 LEU 23 -14.866 34.558 6.167 1.00 10.47 ATOM 325 CD2 LEU 23 -15.295 33.566 3.875 1.00 10.47 ATOM 329 C LEU 23 -13.887 30.902 7.052 1.00 10.47 ATOM 330 O LEU 23 -13.674 29.770 6.624 1.00 10.47 ATOM 331 N ALA 24 -14.961 31.183 7.827 1.00 10.59 ATOM 333 CA ALA 24 -15.994 30.217 8.110 1.00 10.59 ATOM 335 CB ALA 24 -16.970 30.717 9.195 1.00 10.59 ATOM 339 C ALA 24 -16.791 29.959 6.854 1.00 10.59 ATOM 340 O ALA 24 -17.426 30.863 6.311 1.00 10.59 ATOM 341 N ALA 25 -16.727 28.710 6.353 1.00 9.88 ATOM 343 CA ALA 25 -17.360 28.352 5.114 1.00 9.88 ATOM 345 CB ALA 25 -16.391 28.398 3.916 1.00 9.88 ATOM 349 C ALA 25 -17.914 26.974 5.258 1.00 9.88 ATOM 350 O ALA 25 -17.473 26.182 6.093 1.00 9.88 ATOM 351 N ASN 26 -18.938 26.687 4.424 1.00 7.76 ATOM 353 CA ASN 26 -19.787 25.531 4.519 1.00 7.76 ATOM 355 CB ASN 26 -21.008 25.705 3.572 1.00 7.76 ATOM 358 CG ASN 26 -22.090 24.629 3.748 1.00 7.76 ATOM 359 OD1 ASN 26 -21.870 23.512 4.207 1.00 7.76 ATOM 360 ND2 ASN 26 -23.335 24.973 3.339 1.00 7.76 ATOM 363 C ASN 26 -18.976 24.305 4.186 1.00 7.76 ATOM 364 O ASN 26 -18.522 24.107 3.060 1.00 7.76 ATOM 365 N GLU 27 -18.759 23.497 5.246 1.00 5.34 ATOM 367 CA GLU 27 -18.034 22.257 5.333 1.00 5.34 ATOM 369 CB GLU 27 -18.934 21.045 5.037 1.00 5.34 ATOM 372 CG GLU 27 -20.074 20.849 6.061 1.00 5.34 ATOM 375 CD GLU 27 -19.509 20.621 7.460 1.00 5.34 ATOM 376 OE1 GLU 27 -18.680 19.689 7.611 1.00 5.34 ATOM 377 OE2 GLU 27 -19.890 21.367 8.401 1.00 5.34 ATOM 378 C GLU 27 -16.701 22.246 4.612 1.00 5.34 ATOM 379 O GLU 27 -16.289 21.261 4.003 1.00 5.34 ATOM 380 N LEU 28 -15.971 23.374 4.715 1.00 4.24 ATOM 382 CA LEU 28 -14.598 23.470 4.309 1.00 4.24 ATOM 384 CB LEU 28 -14.311 24.721 3.452 1.00 4.24 ATOM 387 CG LEU 28 -15.119 24.804 2.137 1.00 4.24 ATOM 389 CD1 LEU 28 -14.841 26.118 1.400 1.00 4.24 ATOM 393 CD2 LEU 28 -14.880 23.610 1.195 1.00 4.24 ATOM 397 C LEU 28 -13.843 23.541 5.596 1.00 4.24 ATOM 398 O LEU 28 -14.043 24.472 6.372 1.00 4.24 ATOM 399 N ARG 29 -12.996 22.524 5.874 1.00 3.60 ATOM 401 CA ARG 29 -12.384 22.364 7.173 1.00 3.60 ATOM 403 CB ARG 29 -12.730 21.017 7.858 1.00 3.60 ATOM 406 CG ARG 29 -14.223 20.840 8.192 1.00 3.60 ATOM 409 CD ARG 29 -14.500 19.538 8.956 1.00 3.60 ATOM 412 NE ARG 29 -15.969 19.381 9.206 1.00 3.60 ATOM 414 CZ ARG 29 -16.464 18.285 9.846 1.00 3.60 ATOM 415 NH1 ARG 29 -15.662 17.402 10.485 1.00 3.60 ATOM 418 NH2 ARG 29 -17.796 18.057 9.827 1.00 3.60 ATOM 421 C ARG 29 -10.888 22.471 7.041 1.00 3.60 ATOM 422 O ARG 29 -10.292 22.048 6.055 1.00 3.60 ATOM 423 N VAL 30 -10.240 23.059 8.067 1.00 3.36 ATOM 425 CA VAL 30 -8.802 23.150 8.171 1.00 3.36 ATOM 427 CB VAL 30 -8.306 24.546 8.498 1.00 3.36 ATOM 429 CG1 VAL 30 -6.768 24.563 8.643 1.00 3.36 ATOM 433 CG2 VAL 30 -8.750 25.487 7.360 1.00 3.36 ATOM 437 C VAL 30 -8.408 22.212 9.270 1.00 3.36 ATOM 438 O VAL 30 -8.875 22.344 10.401 1.00 3.36 ATOM 439 N THR 31 -7.528 21.236 8.952 1.00 3.27 ATOM 441 CA THR 31 -7.022 20.296 9.929 1.00 3.27 ATOM 443 CB THR 31 -7.347 18.840 9.612 1.00 3.27 ATOM 445 CG2 THR 31 -8.880 18.687 9.517 1.00 3.27 ATOM 449 OG1 THR 31 -6.761 18.376 8.403 1.00 3.27 ATOM 451 C THR 31 -5.549 20.590 10.081 1.00 3.27 ATOM 452 O THR 31 -5.108 21.705 9.806 1.00 3.27 ATOM 453 N GLU 32 -4.745 19.616 10.569 1.00 3.15 ATOM 455 CA GLU 32 -3.348 19.840 10.868 1.00 3.15 ATOM 457 CB GLU 32 -2.751 18.676 11.707 1.00 3.15 ATOM 460 CG GLU 32 -3.325 18.606 13.144 1.00 3.15 ATOM 463 CD GLU 32 -2.780 17.408 13.929 1.00 3.15 ATOM 464 OE1 GLU 32 -1.994 16.596 13.373 1.00 3.15 ATOM 465 OE2 GLU 32 -3.163 17.281 15.121 1.00 3.15 ATOM 466 C GLU 32 -2.552 20.013 9.591 1.00 3.15 ATOM 467 O GLU 32 -1.822 20.991 9.438 1.00 3.15 ATOM 468 N ARG 33 -2.693 19.076 8.625 1.00 3.06 ATOM 470 CA ARG 33 -1.996 19.177 7.364 1.00 3.06 ATOM 472 CB ARG 33 -0.943 18.053 7.143 1.00 3.06 ATOM 475 CG ARG 33 0.171 18.087 8.205 1.00 3.06 ATOM 478 CD ARG 33 1.256 17.011 8.041 1.00 3.06 ATOM 481 NE ARG 33 2.059 17.323 6.810 1.00 3.06 ATOM 483 CZ ARG 33 3.105 18.197 6.826 1.00 3.06 ATOM 484 NH1 ARG 33 3.522 18.821 7.952 1.00 3.06 ATOM 487 NH2 ARG 33 3.769 18.479 5.684 1.00 3.06 ATOM 490 C ARG 33 -3.007 19.370 6.250 1.00 3.06 ATOM 491 O ARG 33 -2.859 20.359 5.530 1.00 3.06 ATOM 492 N PRO 34 -4.047 18.561 6.016 1.00 2.95 ATOM 493 CA PRO 34 -4.987 18.836 4.942 1.00 2.95 ATOM 495 CB PRO 34 -5.829 17.556 4.815 1.00 2.95 ATOM 498 CG PRO 34 -4.946 16.450 5.382 1.00 2.95 ATOM 501 CD PRO 34 -4.165 17.172 6.478 1.00 2.95 ATOM 504 C PRO 34 -5.918 20.003 5.153 1.00 2.95 ATOM 505 O PRO 34 -6.406 20.237 6.258 1.00 2.95 ATOM 506 N PHE 35 -6.237 20.674 4.034 1.00 2.96 ATOM 508 CA PHE 35 -7.473 21.372 3.819 1.00 2.96 ATOM 510 CB PHE 35 -7.273 22.561 2.852 1.00 2.96 ATOM 513 CG PHE 35 -8.556 23.290 2.563 1.00 2.96 ATOM 514 CD1 PHE 35 -9.240 24.010 3.556 1.00 2.96 ATOM 516 CE1 PHE 35 -10.411 24.711 3.239 1.00 2.96 ATOM 518 CZ PHE 35 -10.878 24.745 1.913 1.00 2.96 ATOM 520 CE2 PHE 35 -10.205 24.030 0.916 1.00 2.96 ATOM 522 CD2 PHE 35 -9.067 23.290 1.253 1.00 2.96 ATOM 524 C PHE 35 -8.457 20.364 3.278 1.00 2.96 ATOM 525 O PHE 35 -8.273 19.804 2.197 1.00 2.96 ATOM 526 N TRP 36 -9.530 20.122 4.059 1.00 3.21 ATOM 528 CA TRP 36 -10.608 19.234 3.717 1.00 3.21 ATOM 530 CB TRP 36 -11.232 18.491 4.920 1.00 3.21 ATOM 533 CG TRP 36 -10.394 17.425 5.593 1.00 3.21 ATOM 534 CD1 TRP 36 -9.223 16.837 5.214 1.00 3.21 ATOM 536 NE1 TRP 36 -8.844 15.883 6.135 1.00 3.21 ATOM 538 CE2 TRP 36 -9.773 15.860 7.150 1.00 3.21 ATOM 539 CZ2 TRP 36 -9.854 15.094 8.311 1.00 3.21 ATOM 541 CH2 TRP 36 -10.948 15.313 9.167 1.00 3.21 ATOM 543 CZ3 TRP 36 -11.936 16.264 8.854 1.00 3.21 ATOM 545 CE3 TRP 36 -11.852 17.022 7.677 1.00 3.21 ATOM 547 CD2 TRP 36 -10.765 16.813 6.839 1.00 3.21 ATOM 548 C TRP 36 -11.711 19.997 3.051 1.00 3.21 ATOM 549 O TRP 36 -12.202 21.005 3.550 1.00 3.21 ATOM 550 N ILE 37 -12.125 19.479 1.887 1.00 3.64 ATOM 552 CA ILE 37 -13.195 20.000 1.090 1.00 3.64 ATOM 554 CB ILE 37 -12.792 20.040 -0.373 1.00 3.64 ATOM 556 CG2 ILE 37 -13.992 20.600 -1.173 1.00 3.64 ATOM 560 CG1 ILE 37 -11.520 20.898 -0.578 1.00 3.64 ATOM 563 CD1 ILE 37 -10.889 20.734 -1.962 1.00 3.64 ATOM 567 C ILE 37 -14.291 18.993 1.257 1.00 3.64 ATOM 568 O ILE 37 -14.320 17.999 0.538 1.00 3.64 ATOM 569 N SER 38 -15.213 19.185 2.222 1.00 4.13 ATOM 571 CA SER 38 -16.276 18.222 2.404 1.00 4.13 ATOM 573 CB SER 38 -16.726 18.038 3.865 1.00 4.13 ATOM 576 OG SER 38 -15.655 17.548 4.665 1.00 4.13 ATOM 578 C SER 38 -17.422 18.540 1.476 1.00 4.13 ATOM 579 O SER 38 -17.856 17.660 0.732 1.00 4.13 ATOM 580 N SER 39 -17.910 19.805 1.437 1.00 4.67 ATOM 582 CA SER 39 -18.963 20.184 0.502 1.00 4.67 ATOM 584 CB SER 39 -19.702 21.518 0.789 1.00 4.67 ATOM 587 OG SER 39 -20.514 21.405 1.950 1.00 4.67 ATOM 589 C SER 39 -18.466 20.276 -0.916 1.00 4.67 ATOM 590 O SER 39 -17.438 20.879 -1.201 1.00 4.67 ATOM 591 N PHE 40 -19.244 19.666 -1.839 1.00 5.47 ATOM 593 CA PHE 40 -19.110 19.848 -3.259 1.00 5.47 ATOM 595 CB PHE 40 -18.432 18.719 -4.086 1.00 5.47 ATOM 598 CG PHE 40 -16.961 18.544 -3.811 1.00 5.47 ATOM 599 CD1 PHE 40 -16.431 17.586 -2.930 1.00 5.47 ATOM 601 CE1 PHE 40 -15.038 17.401 -2.839 1.00 5.47 ATOM 603 CZ PHE 40 -14.165 18.194 -3.599 1.00 5.47 ATOM 605 CE2 PHE 40 -14.678 19.179 -4.453 1.00 5.47 ATOM 607 CD2 PHE 40 -16.066 19.344 -4.554 1.00 5.47 ATOM 609 C PHE 40 -20.403 20.266 -3.896 1.00 5.47 ATOM 610 O PHE 40 -21.497 20.151 -3.343 1.00 5.47 ATOM 611 N ILE 41 -20.236 20.815 -5.118 1.00 6.37 ATOM 613 CA ILE 41 -21.221 21.436 -5.962 1.00 6.37 ATOM 615 CB ILE 41 -20.548 22.074 -7.172 1.00 6.37 ATOM 617 CG2 ILE 41 -21.574 22.533 -8.243 1.00 6.37 ATOM 621 CG1 ILE 41 -19.643 23.220 -6.659 1.00 6.37 ATOM 624 CD1 ILE 41 -18.744 23.875 -7.697 1.00 6.37 ATOM 628 C ILE 41 -22.275 20.455 -6.396 1.00 6.37 ATOM 629 O ILE 41 -21.981 19.347 -6.844 1.00 6.37 ATOM 630 N GLY 42 -23.544 20.892 -6.256 1.00 7.10 ATOM 632 CA GLY 42 -24.702 20.212 -6.760 1.00 7.10 ATOM 635 C GLY 42 -25.270 21.141 -7.773 1.00 7.10 ATOM 636 O GLY 42 -25.993 22.075 -7.426 1.00 7.10 ATOM 637 N ARG 43 -24.921 20.903 -9.057 1.00 7.50 ATOM 639 CA ARG 43 -25.362 21.653 -10.211 1.00 7.50 ATOM 641 CB ARG 43 -26.831 21.413 -10.629 1.00 7.50 ATOM 644 CG ARG 43 -27.072 20.012 -11.207 1.00 7.50 ATOM 647 CD ARG 43 -28.529 19.809 -11.640 1.00 7.50 ATOM 650 NE ARG 43 -28.652 18.455 -12.267 1.00 7.50 ATOM 652 CZ ARG 43 -29.838 17.970 -12.721 1.00 7.50 ATOM 653 NH1 ARG 43 -30.992 18.662 -12.594 1.00 7.50 ATOM 656 NH2 ARG 43 -29.880 16.755 -13.308 1.00 7.50 ATOM 659 C ARG 43 -25.012 23.124 -10.207 1.00 7.50 ATOM 660 O ARG 43 -24.007 23.512 -10.793 1.00 7.50 ATOM 661 N SER 44 -25.857 23.975 -9.591 1.00 7.27 ATOM 663 CA SER 44 -25.801 25.416 -9.711 1.00 7.27 ATOM 665 CB SER 44 -27.160 26.080 -9.369 1.00 7.27 ATOM 668 OG SER 44 -28.165 25.675 -10.289 1.00 7.27 ATOM 670 C SER 44 -24.778 26.084 -8.824 1.00 7.27 ATOM 671 O SER 44 -24.444 27.244 -9.061 1.00 7.27 ATOM 672 N LYS 45 -24.274 25.405 -7.766 1.00 6.74 ATOM 674 CA LYS 45 -23.400 26.021 -6.781 1.00 6.74 ATOM 676 CB LYS 45 -23.184 25.093 -5.568 1.00 6.74 ATOM 679 CG LYS 45 -24.475 24.878 -4.777 1.00 6.74 ATOM 682 CD LYS 45 -24.344 23.918 -3.598 1.00 6.74 ATOM 685 CE LYS 45 -25.690 23.755 -2.885 1.00 6.74 ATOM 688 NZ LYS 45 -25.601 22.777 -1.787 1.00 6.74 ATOM 692 C LYS 45 -22.057 26.411 -7.350 1.00 6.74 ATOM 693 O LYS 45 -21.528 25.725 -8.219 1.00 6.74 TER END