####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS164_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS164_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 5 - 23 4.96 15.59 LONGEST_CONTINUOUS_SEGMENT: 19 16 - 34 4.97 16.56 LCS_AVERAGE: 41.74 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.92 15.87 LCS_AVERAGE: 16.58 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.60 16.49 LCS_AVERAGE: 14.15 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 10 3 3 3 4 4 4 6 7 8 8 9 9 9 10 10 10 10 17 20 20 LCS_GDT V 3 V 3 3 5 15 3 3 3 4 4 5 6 7 8 8 9 9 14 15 16 17 20 23 24 24 LCS_GDT Q 4 Q 4 3 7 15 3 3 3 6 7 7 7 8 9 12 12 14 16 17 20 21 23 23 25 25 LCS_GDT G 5 G 5 6 7 19 3 4 6 6 7 7 9 11 12 12 15 15 18 19 20 21 23 25 26 27 LCS_GDT P 6 P 6 6 7 19 3 4 6 6 7 7 9 11 12 12 15 16 18 19 20 21 23 25 26 28 LCS_GDT W 7 W 7 6 7 19 3 4 6 6 7 7 9 11 12 12 15 16 18 19 20 21 23 25 27 28 LCS_GDT V 8 V 8 6 7 19 3 4 6 6 7 7 8 11 12 12 15 16 18 19 20 21 23 25 27 28 LCS_GDT G 9 G 9 6 7 19 3 4 6 6 7 7 9 11 12 12 13 15 17 18 20 21 23 25 27 28 LCS_GDT S 10 S 10 8 8 19 6 7 8 8 8 8 8 10 12 12 13 16 18 19 20 21 23 25 27 28 LCS_GDT S 11 S 11 8 8 19 6 7 8 8 8 8 9 11 12 12 15 16 18 19 20 21 23 25 27 28 LCS_GDT Y 12 Y 12 8 8 19 6 7 8 8 8 8 9 11 12 12 13 15 16 17 20 21 23 25 27 28 LCS_GDT V 13 V 13 8 8 19 6 7 8 8 8 8 9 11 12 12 15 16 18 19 20 21 23 25 27 28 LCS_GDT A 14 A 14 8 8 19 6 7 8 8 8 8 9 11 13 14 15 17 18 19 20 21 23 25 27 28 LCS_GDT E 15 E 15 8 8 19 6 7 8 8 8 8 9 11 12 12 13 14 16 18 20 21 23 25 27 28 LCS_GDT T 16 T 16 8 8 19 6 7 8 8 8 8 8 11 13 14 15 17 18 19 20 21 23 25 27 28 LCS_GDT G 17 G 17 8 8 19 3 4 8 8 8 8 8 9 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT Q 18 Q 18 4 4 19 3 3 4 4 4 6 8 9 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT N 19 N 19 4 11 19 3 3 4 4 6 8 10 11 12 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT W 20 W 20 10 11 19 6 10 10 10 10 10 10 11 12 13 15 15 18 19 20 23 25 27 28 29 LCS_GDT A 21 A 21 10 11 19 6 10 10 10 10 10 10 11 13 14 15 17 18 19 20 23 25 27 28 29 LCS_GDT S 22 S 22 10 11 19 6 10 10 10 10 10 10 11 12 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT L 23 L 23 10 11 19 6 10 10 10 10 10 10 11 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT A 24 A 24 10 11 19 6 10 10 10 10 10 10 11 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT A 25 A 25 10 11 19 6 10 10 10 10 10 10 11 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT N 26 N 26 10 11 19 6 10 10 10 10 10 10 11 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT E 27 E 27 10 11 19 6 10 10 10 10 10 10 11 12 13 15 17 18 19 21 23 25 27 28 29 LCS_GDT L 28 L 28 10 11 19 6 10 10 10 10 10 10 11 12 13 15 16 18 19 21 23 25 27 28 29 LCS_GDT R 29 R 29 10 11 19 6 10 10 10 10 10 10 11 12 13 15 15 17 19 20 22 23 25 27 29 LCS_GDT V 30 V 30 3 4 19 3 3 3 4 5 6 7 10 12 13 15 17 18 19 21 22 25 27 28 29 LCS_GDT T 31 T 31 3 4 19 3 3 4 4 6 7 8 9 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT E 32 E 32 4 4 19 3 4 4 4 5 8 8 11 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT R 33 R 33 4 4 19 3 4 4 4 5 8 10 11 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT P 34 P 34 4 4 19 2 4 4 4 5 8 8 9 13 14 15 17 18 19 21 23 25 27 28 29 LCS_GDT F 35 F 35 4 4 18 2 4 4 4 5 8 10 11 12 14 14 16 18 19 21 23 25 27 28 29 LCS_GDT W 36 W 36 5 6 18 4 4 5 6 6 7 10 11 12 14 14 15 18 19 21 23 25 27 28 29 LCS_GDT I 37 I 37 5 6 18 4 4 5 6 6 8 8 11 12 14 14 15 18 19 21 23 25 27 28 29 LCS_GDT S 38 S 38 5 6 18 4 4 5 6 6 8 10 11 12 14 14 15 16 19 21 23 25 27 28 29 LCS_GDT S 39 S 39 5 6 18 4 4 5 6 6 8 10 11 12 14 14 15 16 19 21 23 25 27 28 29 LCS_GDT F 40 F 40 5 6 18 3 4 5 6 6 8 8 9 11 14 14 15 16 17 20 22 23 27 28 29 LCS_GDT I 41 I 41 4 6 18 3 4 5 6 6 7 10 11 12 14 14 15 16 19 21 23 25 27 28 29 LCS_GDT G 42 G 42 3 6 18 2 3 4 5 5 7 10 11 12 14 14 15 16 19 21 23 25 27 28 29 LCS_GDT R 43 R 43 3 5 18 0 3 3 4 5 7 10 11 12 14 14 15 16 18 21 23 25 27 28 29 LCS_GDT S 44 S 44 3 5 18 0 3 3 4 5 7 10 11 12 14 14 15 16 18 21 22 25 27 28 29 LCS_GDT K 45 K 45 3 5 18 0 3 3 3 5 7 10 11 12 14 14 15 16 17 18 20 23 23 28 29 LCS_AVERAGE LCS_A: 24.16 ( 14.15 16.58 41.74 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 10 10 10 10 10 10 11 13 14 15 17 18 19 21 23 25 27 28 29 GDT PERCENT_AT 13.64 22.73 22.73 22.73 22.73 22.73 22.73 25.00 29.55 31.82 34.09 38.64 40.91 43.18 47.73 52.27 56.82 61.36 63.64 65.91 GDT RMS_LOCAL 0.24 0.60 0.60 0.60 0.60 0.60 0.60 1.92 3.75 3.38 3.96 4.44 4.60 4.82 5.67 5.94 6.17 6.47 6.69 6.84 GDT RMS_ALL_AT 16.72 16.49 16.49 16.49 16.49 16.49 16.49 15.87 14.99 21.34 13.41 14.99 14.24 15.57 14.79 14.55 14.40 14.84 15.14 15.11 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 37.326 0 0.085 0.107 39.297 0.000 0.000 - LGA V 3 V 3 30.803 0 0.047 0.068 32.846 0.000 0.000 26.356 LGA Q 4 Q 4 30.923 0 0.642 0.625 37.329 0.000 0.000 33.515 LGA G 5 G 5 26.689 0 0.075 0.075 27.902 0.000 0.000 - LGA P 6 P 6 23.282 0 0.119 0.439 27.709 0.000 0.000 26.649 LGA W 7 W 7 19.041 0 0.276 0.225 22.065 0.000 0.000 16.402 LGA V 8 V 8 17.832 0 0.081 0.089 18.494 0.000 0.000 17.503 LGA G 9 G 9 13.514 0 0.218 0.218 16.630 0.000 0.000 - LGA S 10 S 10 15.929 0 0.291 0.433 17.782 0.000 0.000 15.180 LGA S 11 S 11 19.874 0 0.154 0.146 24.250 0.000 0.000 24.250 LGA Y 12 Y 12 18.113 0 0.084 1.108 18.677 0.000 0.000 13.753 LGA V 13 V 13 12.395 0 0.047 0.066 14.305 0.000 0.000 9.564 LGA A 14 A 14 16.252 0 0.011 0.012 18.189 0.000 0.000 - LGA E 15 E 15 18.648 0 0.053 0.854 25.031 0.000 0.000 24.606 LGA T 16 T 16 13.603 0 0.111 0.144 15.222 0.000 0.000 11.924 LGA G 17 G 17 11.258 0 0.204 0.204 11.913 0.000 0.000 - LGA Q 18 Q 18 9.312 0 0.602 0.917 16.169 0.000 0.000 13.267 LGA N 19 N 19 4.996 0 0.062 1.104 8.551 8.636 4.545 8.486 LGA W 20 W 20 2.066 0 0.610 1.059 10.227 55.455 16.104 10.227 LGA A 21 A 21 0.765 0 0.049 0.048 1.262 77.727 78.545 - LGA S 22 S 22 1.700 0 0.045 0.624 2.298 54.545 56.364 0.812 LGA L 23 L 23 2.150 0 0.093 1.425 7.433 55.000 29.773 5.133 LGA A 24 A 24 1.153 0 0.072 0.080 1.216 73.636 72.000 - LGA A 25 A 25 0.583 0 0.077 0.072 0.583 86.364 89.091 - LGA N 26 N 26 0.530 0 0.054 0.184 1.391 90.909 84.318 0.593 LGA E 27 E 27 0.285 0 0.089 1.037 4.761 95.455 62.020 4.761 LGA L 28 L 28 0.655 0 0.239 0.280 1.751 78.636 74.091 1.259 LGA R 29 R 29 0.805 0 0.350 1.658 11.707 48.182 19.174 10.420 LGA V 30 V 30 7.613 0 0.252 0.256 12.326 0.455 0.260 12.326 LGA T 31 T 31 10.594 0 0.672 1.016 13.083 0.000 0.000 10.462 LGA E 32 E 32 15.747 0 0.132 1.190 17.373 0.000 0.000 17.162 LGA R 33 R 33 17.605 0 0.614 1.647 17.703 0.000 0.000 14.289 LGA P 34 P 34 16.202 0 0.581 0.566 19.445 0.000 0.000 19.284 LGA F 35 F 35 16.369 0 0.668 1.471 19.132 0.000 0.000 17.912 LGA W 36 W 36 17.521 0 0.621 1.024 26.637 0.000 0.000 26.637 LGA I 37 I 37 14.285 0 0.113 0.988 15.462 0.000 0.000 13.040 LGA S 38 S 38 15.581 0 0.112 0.129 17.431 0.000 0.000 17.431 LGA S 39 S 39 14.287 0 0.174 0.250 14.753 0.000 0.000 14.677 LGA F 40 F 40 14.431 0 0.499 0.778 19.042 0.000 0.000 19.042 LGA I 41 I 41 12.451 0 0.560 1.407 16.137 0.000 0.000 16.137 LGA G 42 G 42 10.846 0 0.375 0.375 12.238 0.000 0.000 - LGA R 43 R 43 11.176 0 0.609 1.357 16.190 0.000 0.000 16.190 LGA S 44 S 44 15.419 0 0.319 0.629 17.571 0.000 0.000 17.571 LGA K 45 K 45 20.488 0 0.362 0.419 30.090 0.000 0.000 30.090 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.359 11.158 12.107 16.477 13.325 6.597 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 11 1.92 30.682 26.175 0.545 LGA_LOCAL RMSD: 1.917 Number of atoms: 11 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.867 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.359 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.331412 * X + 0.930253 * Y + 0.157467 * Z + -17.686922 Y_new = -0.893022 * X + 0.363138 * Y + -0.265785 * Z + 108.546295 Z_new = -0.304430 * X + -0.052537 * Y + 0.951085 * Z + -66.164749 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.215438 0.309340 -0.055183 [DEG: -69.6395 17.7239 -3.1617 ] ZXZ: 0.534855 0.314067 -1.741688 [DEG: 30.6450 17.9947 -99.7914 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS164_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS164_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 11 1.92 26.175 11.36 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS164_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 1vt4I ATOM 11 N ALA 2 -20.447 36.842 -9.062 1.00 14.49 ATOM 12 CA ALA 2 -19.825 35.789 -8.296 1.00 14.49 ATOM 13 C ALA 2 -18.470 35.668 -8.977 1.00 14.49 ATOM 14 O ALA 2 -18.391 35.703 -10.203 1.00 14.49 ATOM 15 CB ALA 2 -20.555 34.451 -8.336 1.00 14.49 ATOM 17 N VAL 3 -17.435 35.515 -8.034 1.00 14.19 ATOM 18 CA VAL 3 -16.103 35.535 -8.478 1.00 14.19 ATOM 19 C VAL 3 -15.493 34.107 -8.126 1.00 14.19 ATOM 20 O VAL 3 -15.675 33.617 -7.013 1.00 14.19 ATOM 21 CB VAL 3 -15.256 36.649 -7.821 1.00 14.19 ATOM 22 CG1 VAL 3 -13.800 36.553 -8.274 1.00 14.19 ATOM 23 CG2 VAL 3 -15.794 38.025 -8.210 1.00 14.19 ATOM 25 N GLN 4 -14.795 33.509 -9.081 1.00 14.86 ATOM 26 CA GLN 4 -15.214 32.162 -9.575 1.00 14.86 ATOM 27 C GLN 4 -15.161 31.059 -8.434 1.00 14.86 ATOM 28 O GLN 4 -16.066 30.232 -8.333 1.00 14.86 ATOM 29 CB GLN 4 -14.326 31.744 -10.750 1.00 14.86 ATOM 30 CG GLN 4 -14.530 32.657 -11.960 1.00 14.86 ATOM 31 CD GLN 4 -13.566 32.298 -13.086 1.00 14.86 ATOM 32 NE2 GLN 4 -14.073 32.060 -14.277 1.00 14.86 ATOM 33 OE1 GLN 4 -12.362 32.235 -12.887 1.00 14.86 ATOM 35 N GLY 5 -14.101 31.105 -7.620 1.00 14.25 ATOM 36 CA GLY 5 -14.380 30.681 -6.234 1.00 14.25 ATOM 37 C GLY 5 -13.751 31.745 -5.409 1.00 14.25 ATOM 38 O GLY 5 -12.778 32.363 -5.837 1.00 14.25 ATOM 39 N PRO 6 -14.379 31.908 -4.186 1.00 13.81 ATOM 40 CA PRO 6 -13.656 32.831 -3.240 1.00 13.81 ATOM 41 C PRO 6 -12.220 32.482 -2.909 1.00 13.81 ATOM 42 O PRO 6 -11.387 33.375 -2.763 1.00 13.81 ATOM 43 CB PRO 6 -14.547 32.745 -1.999 1.00 13.81 ATOM 44 CG PRO 6 -15.928 32.411 -2.518 1.00 13.81 ATOM 45 CD PRO 6 -15.729 31.445 -3.674 1.00 13.81 ATOM 47 N TRP 7 -12.029 31.073 -2.815 1.00 13.70 ATOM 48 CA TRP 7 -10.689 30.666 -2.671 1.00 13.70 ATOM 49 C TRP 7 -10.067 29.729 -3.701 1.00 13.70 ATOM 50 O TRP 7 -10.598 28.649 -3.951 1.00 13.70 ATOM 51 CB TRP 7 -10.595 30.045 -1.274 1.00 13.70 ATOM 52 CG TRP 7 -10.877 31.050 -0.192 1.00 13.70 ATOM 53 CD1 TRP 7 -12.033 31.165 0.507 1.00 13.70 ATOM 54 CD2 TRP 7 -9.997 32.070 0.309 1.00 13.70 ATOM 55 NE1 TRP 7 -11.920 32.196 1.411 1.00 13.70 ATOM 56 CE2 TRP 7 -10.676 32.779 1.317 1.00 13.70 ATOM 57 CE3 TRP 7 -8.687 32.443 -0.014 1.00 13.70 ATOM 58 CZ2 TRP 7 -10.081 33.836 1.999 1.00 13.70 ATOM 59 CZ3 TRP 7 -8.091 33.502 0.669 1.00 13.70 ATOM 60 CH2 TRP 7 -8.782 34.194 1.668 1.00 13.70 ATOM 62 N VAL 8 -8.928 30.226 -4.249 1.00 14.58 ATOM 63 CA VAL 8 -8.236 29.774 -5.379 1.00 14.58 ATOM 64 C VAL 8 -7.520 28.511 -5.365 1.00 14.58 ATOM 65 O VAL 8 -7.599 27.746 -6.324 1.00 14.58 ATOM 66 CB VAL 8 -7.275 30.925 -5.752 1.00 14.58 ATOM 67 CG1 VAL 8 -6.326 30.489 -6.868 1.00 14.58 ATOM 68 CG2 VAL 8 -8.064 32.141 -6.234 1.00 14.58 ATOM 70 N GLY 9 -6.770 28.239 -4.221 1.00 20.83 ATOM 71 CA GLY 9 -5.679 27.267 -4.399 1.00 20.83 ATOM 72 C GLY 9 -6.160 25.799 -4.548 1.00 20.83 ATOM 73 O GLY 9 -6.731 25.438 -5.575 1.00 20.83 ATOM 75 N SER 10 -5.924 24.980 -3.509 1.00 19.54 ATOM 76 CA SER 10 -6.585 23.599 -3.441 1.00 19.54 ATOM 77 C SER 10 -7.270 23.499 -2.113 1.00 19.54 ATOM 78 O SER 10 -7.365 22.411 -1.550 1.00 19.54 ATOM 79 CB SER 10 -5.573 22.462 -3.592 1.00 19.54 ATOM 80 OG SER 10 -4.698 22.438 -2.474 1.00 19.54 ATOM 82 N SER 11 -7.754 24.604 -1.604 1.00 20.20 ATOM 83 CA SER 11 -9.128 24.752 -1.037 1.00 20.20 ATOM 84 C SER 11 -8.985 24.200 0.291 1.00 20.20 ATOM 85 O SER 11 -9.141 24.918 1.275 1.00 20.20 ATOM 86 CB SER 11 -10.217 23.993 -1.801 1.00 20.20 ATOM 87 OG SER 11 -11.477 24.191 -1.175 1.00 20.20 ATOM 89 N TYR 12 -8.663 22.846 0.505 1.00 12.39 ATOM 90 CA TYR 12 -8.457 22.480 1.824 1.00 12.39 ATOM 91 C TYR 12 -7.254 23.231 2.400 1.00 12.39 ATOM 92 O TYR 12 -7.329 23.760 3.507 1.00 12.39 ATOM 93 CB TYR 12 -8.233 20.968 1.941 1.00 12.39 ATOM 94 CG TYR 12 -7.950 20.538 3.366 1.00 12.39 ATOM 95 CD1 TYR 12 -8.995 20.377 4.277 1.00 12.39 ATOM 96 CD2 TYR 12 -6.640 20.299 3.782 1.00 12.39 ATOM 97 CE1 TYR 12 -8.733 19.981 5.590 1.00 12.39 ATOM 98 CE2 TYR 12 -6.376 19.904 5.095 1.00 12.39 ATOM 99 CZ TYR 12 -7.423 19.746 5.994 1.00 12.39 ATOM 100 OH TYR 12 -7.165 19.357 7.286 1.00 12.39 ATOM 102 N VAL 13 -6.130 23.268 1.594 1.00 11.13 ATOM 103 CA VAL 13 -4.940 23.892 1.953 1.00 11.13 ATOM 104 C VAL 13 -5.185 25.394 2.093 1.00 11.13 ATOM 105 O VAL 13 -4.648 26.024 3.000 1.00 11.13 ATOM 106 CB VAL 13 -3.820 23.630 0.920 1.00 11.13 ATOM 107 CG1 VAL 13 -2.578 24.455 1.256 1.00 11.13 ATOM 108 CG2 VAL 13 -3.434 22.152 0.917 1.00 11.13 ATOM 110 N ALA 14 -6.000 25.964 1.201 1.00 13.77 ATOM 111 CA ALA 14 -6.331 27.374 1.269 1.00 13.77 ATOM 112 C ALA 14 -7.063 27.701 2.570 1.00 13.77 ATOM 113 O ALA 14 -6.777 28.717 3.199 1.00 13.77 ATOM 114 CB ALA 14 -7.183 27.771 0.070 1.00 13.77 ATOM 116 N GLU 15 -8.002 26.831 2.974 1.00 14.22 ATOM 117 CA GLU 15 -8.712 26.991 4.153 1.00 14.22 ATOM 118 C GLU 15 -7.838 26.935 5.380 1.00 14.22 ATOM 119 O GLU 15 -8.001 27.745 6.290 1.00 14.22 ATOM 120 CB GLU 15 -9.803 25.921 4.235 1.00 14.22 ATOM 121 CG GLU 15 -10.671 26.100 5.481 1.00 14.22 ATOM 122 CD GLU 15 -11.786 25.060 5.525 1.00 14.22 ATOM 123 OE1 GLU 15 -12.548 25.066 6.495 1.00 14.22 ATOM 124 OE2 GLU 15 -11.867 24.262 4.584 1.00 14.22 ATOM 126 N THR 16 -6.978 25.987 5.301 1.00 13.16 ATOM 127 CA THR 16 -6.071 25.862 6.416 1.00 13.16 ATOM 128 C THR 16 -5.155 27.077 6.472 1.00 13.16 ATOM 129 O THR 16 -4.790 27.525 7.556 1.00 13.16 ATOM 130 CB THR 16 -5.223 24.579 6.315 1.00 13.16 ATOM 131 OG1 THR 16 -4.461 24.618 5.116 1.00 13.16 ATOM 132 CG2 THR 16 -6.105 23.332 6.295 1.00 13.16 ATOM 134 N GLY 17 -4.758 27.656 5.284 1.00 13.28 ATOM 135 CA GLY 17 -3.973 28.894 5.232 1.00 13.28 ATOM 136 C GLY 17 -4.652 30.088 5.923 1.00 13.28 ATOM 137 O GLY 17 -3.977 30.913 6.534 1.00 13.28 ATOM 139 N GLN 18 -5.971 30.066 5.765 1.00 13.36 ATOM 140 CA GLN 18 -6.849 30.963 6.384 1.00 13.36 ATOM 141 C GLN 18 -6.785 30.964 7.905 1.00 13.36 ATOM 142 O GLN 18 -6.699 32.025 8.518 1.00 13.36 ATOM 143 CB GLN 18 -8.273 30.647 5.918 1.00 13.36 ATOM 144 CG GLN 18 -8.548 31.215 4.525 1.00 13.36 ATOM 145 CD GLN 18 -9.908 30.759 4.007 1.00 13.36 ATOM 146 NE2 GLN 18 -9.942 30.093 2.873 1.00 13.36 ATOM 147 OE1 GLN 18 -10.932 31.008 4.627 1.00 13.36 ATOM 149 N ASN 19 -6.819 29.782 8.490 1.00 15.37 ATOM 150 CA ASN 19 -6.670 29.489 9.854 1.00 15.37 ATOM 151 C ASN 19 -5.352 29.777 10.370 1.00 15.37 ATOM 152 O ASN 19 -5.220 30.245 11.500 1.00 15.37 ATOM 153 CB ASN 19 -7.019 28.017 10.093 1.00 15.37 ATOM 154 CG ASN 19 -8.516 27.771 9.928 1.00 15.37 ATOM 155 ND2 ASN 19 -8.891 26.821 9.096 1.00 15.37 ATOM 156 OD1 ASN 19 -9.336 28.433 10.549 1.00 15.37 ATOM 158 N TRP 20 -4.299 29.491 9.491 1.00 12.76 ATOM 159 CA TRP 20 -2.907 29.755 9.844 1.00 12.76 ATOM 160 C TRP 20 -2.712 31.259 10.072 1.00 12.76 ATOM 161 O TRP 20 -2.028 31.657 11.013 1.00 12.76 ATOM 162 CB TRP 20 -1.954 29.263 8.752 1.00 12.76 ATOM 163 CG TRP 20 -1.903 27.762 8.686 1.00 12.76 ATOM 164 CD1 TRP 20 -2.515 26.906 9.541 1.00 12.76 ATOM 165 CD2 TRP 20 -1.211 26.949 7.724 1.00 12.76 ATOM 166 NE1 TRP 20 -2.240 25.611 9.165 1.00 12.76 ATOM 167 CE2 TRP 20 -1.438 25.598 8.046 1.00 12.76 ATOM 168 CE3 TRP 20 -0.414 27.254 6.613 1.00 12.76 ATOM 169 CZ2 TRP 20 -0.894 24.562 7.292 1.00 12.76 ATOM 170 CZ3 TRP 20 0.130 26.216 5.858 1.00 12.76 ATOM 171 CH2 TRP 20 -0.108 24.880 6.194 1.00 12.76 ATOM 173 N ALA 21 -3.270 32.099 9.283 1.00 12.21 ATOM 174 CA ALA 21 -3.160 33.531 9.363 1.00 12.21 ATOM 175 C ALA 21 -3.747 33.985 10.762 1.00 12.21 ATOM 176 O ALA 21 -3.190 34.871 11.405 1.00 12.21 ATOM 177 CB ALA 21 -3.906 34.221 8.228 1.00 12.21 ATOM 179 N SER 22 -4.868 33.296 11.120 1.00 13.84 ATOM 180 CA SER 22 -5.401 33.423 12.550 1.00 13.84 ATOM 181 C SER 22 -4.485 32.971 13.594 1.00 13.84 ATOM 182 O SER 22 -4.304 33.658 14.596 1.00 13.84 ATOM 183 CB SER 22 -6.718 32.651 12.642 1.00 13.84 ATOM 184 OG SER 22 -7.635 33.135 11.671 1.00 13.84 ATOM 186 N LEU 23 -3.841 31.792 13.437 1.00 13.17 ATOM 187 CA LEU 23 -2.910 31.297 14.373 1.00 13.17 ATOM 188 C LEU 23 -1.857 32.397 14.527 1.00 13.17 ATOM 189 O LEU 23 -1.476 32.734 15.646 1.00 13.17 ATOM 190 CB LEU 23 -2.245 29.993 13.924 1.00 13.17 ATOM 191 CG LEU 23 -1.217 29.472 14.935 1.00 13.17 ATOM 192 CD1 LEU 23 -1.896 29.167 16.268 1.00 13.17 ATOM 193 CD2 LEU 23 -0.565 28.192 14.414 1.00 13.17 ATOM 195 N ALA 24 -1.420 32.927 13.446 1.00 12.31 ATOM 196 CA ALA 24 -0.381 33.877 13.454 1.00 12.31 ATOM 197 C ALA 24 -0.562 35.197 14.073 1.00 12.31 ATOM 198 O ALA 24 0.282 35.632 14.854 1.00 12.31 ATOM 199 CB ALA 24 0.007 34.030 11.989 1.00 12.31 ATOM 201 N ALA 25 -1.752 35.804 13.663 1.00 13.11 ATOM 202 CA ALA 25 -2.032 37.153 14.110 1.00 13.11 ATOM 203 C ALA 25 -2.114 36.931 15.704 1.00 13.11 ATOM 204 O ALA 25 -1.584 37.735 16.467 1.00 13.11 ATOM 205 CB ALA 25 -3.333 37.755 13.594 1.00 13.11 ATOM 207 N ASN 26 -2.815 35.770 16.136 1.00 14.02 ATOM 208 CA ASN 26 -3.002 35.550 17.565 1.00 14.02 ATOM 209 C ASN 26 -1.866 35.219 18.379 1.00 14.02 ATOM 210 O ASN 26 -1.735 35.728 19.491 1.00 14.02 ATOM 211 CB ASN 26 -4.074 34.463 17.689 1.00 14.02 ATOM 212 CG ASN 26 -5.451 35.000 17.314 1.00 14.02 ATOM 213 ND2 ASN 26 -6.314 34.157 16.786 1.00 14.02 ATOM 214 OD1 ASN 26 -5.742 36.174 17.500 1.00 14.02 ATOM 216 N GLU 27 -1.006 34.321 17.768 1.00 13.09 ATOM 217 CA GLU 27 0.196 33.866 18.407 1.00 13.09 ATOM 218 C GLU 27 1.081 35.060 18.610 1.00 13.09 ATOM 219 O GLU 27 1.728 35.178 19.647 1.00 13.09 ATOM 220 CB GLU 27 0.927 32.804 17.578 1.00 13.09 ATOM 221 CG GLU 27 2.147 32.259 18.321 1.00 13.09 ATOM 222 CD GLU 27 2.844 31.177 17.501 1.00 13.09 ATOM 223 OE1 GLU 27 3.874 30.674 17.960 1.00 13.09 ATOM 224 OE2 GLU 27 2.341 30.858 16.418 1.00 13.09 ATOM 226 N LEU 28 1.153 36.001 17.653 1.00 12.01 ATOM 227 CA LEU 28 1.882 37.258 17.821 1.00 12.01 ATOM 228 C LEU 28 1.218 38.234 18.875 1.00 12.01 ATOM 229 O LEU 28 1.923 38.859 19.665 1.00 12.01 ATOM 230 CB LEU 28 1.994 37.952 16.461 1.00 12.01 ATOM 231 CG LEU 28 2.951 37.234 15.503 1.00 12.01 ATOM 232 CD1 LEU 28 2.872 37.858 14.112 1.00 12.01 ATOM 233 CD2 LEU 28 4.389 37.347 16.010 1.00 12.01 ATOM 235 N ARG 29 -0.033 38.370 18.914 1.00 13.73 ATOM 236 CA ARG 29 -0.669 39.261 19.980 1.00 13.73 ATOM 237 C ARG 29 -0.444 38.594 21.433 1.00 13.73 ATOM 238 O ARG 29 -0.204 39.304 22.406 1.00 13.73 ATOM 239 CB ARG 29 -2.165 39.459 19.721 1.00 13.73 ATOM 240 CG ARG 29 -2.413 40.347 18.501 1.00 13.73 ATOM 241 CD ARG 29 -3.908 40.459 18.208 1.00 13.73 ATOM 242 NE ARG 29 -4.121 41.280 16.998 1.00 13.73 ATOM 243 CZ ARG 29 -4.157 42.599 17.038 1.00 13.73 ATOM 244 NH1 ARG 29 -4.349 43.295 15.934 1.00 13.73 ATOM 245 NH2 ARG 29 -4.000 43.224 18.185 1.00 13.73 ATOM 247 N VAL 30 -0.519 37.228 21.553 1.00 14.63 ATOM 248 CA VAL 30 -0.251 36.609 22.869 1.00 14.63 ATOM 249 C VAL 30 1.283 36.450 23.102 1.00 14.63 ATOM 250 O VAL 30 1.793 35.331 23.105 1.00 14.63 ATOM 251 CB VAL 30 -0.951 35.236 22.986 1.00 14.63 ATOM 252 CG1 VAL 30 -0.579 34.556 24.302 1.00 14.63 ATOM 253 CG2 VAL 30 -2.469 35.408 22.941 1.00 14.63 ATOM 255 N THR 31 2.052 37.525 23.306 1.00 12.83 ATOM 256 CA THR 31 3.449 37.598 22.948 1.00 12.83 ATOM 257 C THR 31 4.248 38.664 23.570 1.00 12.83 ATOM 258 O THR 31 3.702 39.517 24.266 1.00 12.83 ATOM 259 CB THR 31 3.527 37.719 21.414 1.00 12.83 ATOM 260 OG1 THR 31 2.847 36.620 20.824 1.00 12.83 ATOM 261 CG2 THR 31 4.974 37.716 20.929 1.00 12.83 ATOM 263 N GLU 32 5.562 38.663 23.342 1.00 13.44 ATOM 264 CA GLU 32 6.393 39.788 23.895 1.00 13.44 ATOM 265 C GLU 32 7.372 40.174 22.782 1.00 13.44 ATOM 266 O GLU 32 8.301 39.424 22.492 1.00 13.44 ATOM 267 CB GLU 32 7.162 39.401 25.162 1.00 13.44 ATOM 268 CG GLU 32 7.975 40.576 25.705 1.00 13.44 ATOM 269 CD GLU 32 8.764 40.168 26.943 1.00 13.44 ATOM 270 OE1 GLU 32 8.672 39.001 27.334 1.00 13.44 ATOM 271 OE2 GLU 32 9.459 41.030 27.495 1.00 13.44 ATOM 273 N ARG 33 7.151 41.419 22.131 1.00 14.55 ATOM 274 CA ARG 33 6.965 41.652 20.643 1.00 14.55 ATOM 275 C ARG 33 5.727 42.666 20.571 1.00 14.55 ATOM 276 O ARG 33 5.775 43.646 19.830 1.00 14.55 ATOM 277 CB ARG 33 6.651 40.384 19.846 1.00 14.55 ATOM 278 CG ARG 33 6.319 40.704 18.388 1.00 14.55 ATOM 279 CD ARG 33 7.527 41.313 17.677 1.00 14.55 ATOM 280 NE ARG 33 7.151 41.712 16.305 1.00 14.55 ATOM 281 CZ ARG 33 7.134 40.854 15.300 1.00 14.55 ATOM 282 NH1 ARG 33 6.794 41.253 14.090 1.00 14.55 ATOM 283 NH2 ARG 33 7.458 39.597 15.509 1.00 14.55 ATOM 284 N PRO 34 4.637 42.472 21.311 1.00 15.73 ATOM 285 CA PRO 34 3.488 43.272 20.896 1.00 15.73 ATOM 286 C PRO 34 3.719 44.617 21.452 1.00 15.73 ATOM 287 O PRO 34 3.350 45.613 20.833 1.00 15.73 ATOM 288 CB PRO 34 2.249 42.624 21.515 1.00 15.73 ATOM 289 CG PRO 34 2.731 41.973 22.792 1.00 15.73 ATOM 290 CD PRO 34 4.130 41.457 22.509 1.00 15.73 ATOM 292 N PHE 35 4.348 44.822 22.651 1.00 16.71 ATOM 293 CA PHE 35 4.449 46.131 23.085 1.00 16.71 ATOM 294 C PHE 35 5.708 46.770 22.525 1.00 16.71 ATOM 295 O PHE 35 5.856 47.989 22.579 1.00 16.71 ATOM 296 CB PHE 35 4.465 46.197 24.616 1.00 16.71 ATOM 297 CG PHE 35 3.151 45.752 25.218 1.00 16.71 ATOM 298 CD1 PHE 35 3.015 44.467 25.738 1.00 16.71 ATOM 299 CD2 PHE 35 2.067 46.625 25.257 1.00 16.71 ATOM 300 CE1 PHE 35 1.803 44.058 26.292 1.00 16.71 ATOM 301 CE2 PHE 35 0.855 46.217 25.811 1.00 16.71 ATOM 302 CZ PHE 35 0.725 44.933 26.328 1.00 16.71 ATOM 304 N TRP 36 6.628 45.923 21.970 1.00 15.04 ATOM 305 CA TRP 36 7.726 46.413 21.160 1.00 15.04 ATOM 306 C TRP 36 7.174 47.053 19.893 1.00 15.04 ATOM 307 O TRP 36 7.691 48.073 19.440 1.00 15.04 ATOM 308 CB TRP 36 8.697 45.286 20.797 1.00 15.04 ATOM 309 CG TRP 36 9.323 44.668 22.017 1.00 15.04 ATOM 310 CD1 TRP 36 9.309 45.188 23.268 1.00 15.04 ATOM 311 CD2 TRP 36 10.047 43.429 22.099 1.00 15.04 ATOM 312 NE1 TRP 36 9.982 44.343 24.121 1.00 15.04 ATOM 313 CE2 TRP 36 10.452 43.247 23.434 1.00 15.04 ATOM 314 CE3 TRP 36 10.387 42.457 21.151 1.00 15.04 ATOM 315 CZ2 TRP 36 11.178 42.129 23.835 1.00 15.04 ATOM 316 CZ3 TRP 36 11.115 41.338 21.553 1.00 15.04 ATOM 317 CH2 TRP 36 11.508 41.174 22.884 1.00 15.04 ATOM 319 N ILE 37 6.152 46.436 19.387 1.00 16.12 ATOM 320 CA ILE 37 5.391 47.102 18.343 1.00 16.12 ATOM 321 C ILE 37 4.839 48.493 18.755 1.00 16.12 ATOM 322 O ILE 37 4.974 49.457 18.004 1.00 16.12 ATOM 323 CB ILE 37 4.234 46.181 17.896 1.00 16.12 ATOM 324 CG1 ILE 37 4.783 44.940 17.183 1.00 16.12 ATOM 325 CG2 ILE 37 3.305 46.924 16.932 1.00 16.12 ATOM 326 CD1 ILE 37 3.691 43.904 16.937 1.00 16.12 ATOM 328 N SER 38 4.226 48.634 19.927 1.00 19.70 ATOM 329 CA SER 38 3.620 49.893 20.390 1.00 19.70 ATOM 330 C SER 38 4.742 50.994 20.538 1.00 19.70 ATOM 331 O SER 38 4.527 52.147 20.172 1.00 19.70 ATOM 332 CB SER 38 2.900 49.703 21.726 1.00 19.70 ATOM 333 OG SER 38 3.845 49.475 22.760 1.00 19.70 ATOM 335 N SER 39 5.918 50.450 21.104 1.00 17.32 ATOM 336 CA SER 39 6.963 51.347 21.269 1.00 17.32 ATOM 337 C SER 39 7.641 51.926 20.110 1.00 17.32 ATOM 338 O SER 39 7.899 53.127 20.083 1.00 17.32 ATOM 339 CB SER 39 7.977 50.619 22.154 1.00 17.32 ATOM 340 OG SER 39 8.489 49.483 21.473 1.00 17.32 ATOM 342 N PHE 40 7.931 51.013 19.109 1.00 14.74 ATOM 343 CA PHE 40 8.829 51.519 17.988 1.00 14.74 ATOM 344 C PHE 40 7.780 52.326 17.084 1.00 14.74 ATOM 345 O PHE 40 7.108 53.229 17.578 1.00 14.74 ATOM 346 CB PHE 40 9.510 50.429 17.153 1.00 14.74 ATOM 347 CG PHE 40 10.471 49.601 17.975 1.00 14.74 ATOM 348 CD1 PHE 40 10.343 48.214 18.022 1.00 14.74 ATOM 349 CD2 PHE 40 11.492 50.219 18.693 1.00 14.74 ATOM 350 CE1 PHE 40 11.230 47.451 18.781 1.00 14.74 ATOM 351 CE2 PHE 40 12.380 49.456 19.451 1.00 14.74 ATOM 352 CZ PHE 40 12.247 48.073 19.495 1.00 14.74 ATOM 354 N ILE 41 7.585 52.060 15.786 1.00 10.35 ATOM 355 CA ILE 41 6.124 51.997 15.434 1.00 10.35 ATOM 356 C ILE 41 5.853 51.110 14.234 1.00 10.35 ATOM 357 O ILE 41 5.074 50.164 14.329 1.00 10.35 ATOM 358 CB ILE 41 5.583 53.422 15.176 1.00 10.35 ATOM 359 CG1 ILE 41 4.076 53.380 14.902 1.00 10.35 ATOM 360 CG2 ILE 41 6.282 54.043 13.965 1.00 10.35 ATOM 361 CD1 ILE 41 3.476 54.780 14.849 1.00 10.35 ATOM 363 N GLY 42 6.450 51.362 13.145 1.00 7.73 ATOM 364 CA GLY 42 5.788 51.534 11.921 1.00 7.73 ATOM 365 C GLY 42 6.748 51.298 10.795 1.00 7.73 ATOM 366 O GLY 42 7.100 52.232 10.079 1.00 7.73 ATOM 368 N ARG 43 7.138 49.980 10.688 1.00 8.05 ATOM 369 CA ARG 43 7.074 49.517 9.364 1.00 8.05 ATOM 370 C ARG 43 5.873 48.763 9.034 1.00 8.05 ATOM 371 O ARG 43 5.835 48.079 8.014 1.00 8.05 ATOM 372 CB ARG 43 8.318 48.668 9.093 1.00 8.05 ATOM 373 CG ARG 43 9.600 49.495 9.201 1.00 8.05 ATOM 374 CD ARG 43 9.641 50.572 8.119 1.00 8.05 ATOM 375 NE ARG 43 10.124 49.987 6.850 1.00 8.05 ATOM 376 CZ ARG 43 9.363 49.911 5.773 1.00 8.05 ATOM 377 NH1 ARG 43 9.831 49.381 4.661 1.00 8.05 ATOM 378 NH2 ARG 43 8.129 50.369 5.811 1.00 8.05 ATOM 380 N SER 44 4.770 48.852 9.912 1.00 11.40 ATOM 381 CA SER 44 3.510 49.432 9.465 1.00 11.40 ATOM 382 C SER 44 3.298 48.906 7.972 1.00 11.40 ATOM 383 O SER 44 3.331 47.701 7.733 1.00 11.40 ATOM 384 CB SER 44 3.514 50.962 9.481 1.00 11.40 ATOM 385 OG SER 44 4.513 51.456 8.602 1.00 11.40 ATOM 387 N LYS 45 3.093 49.878 7.014 1.00 13.78 ATOM 388 CA LYS 45 2.602 49.421 5.707 1.00 13.78 ATOM 389 C LYS 45 3.523 48.538 5.015 1.00 13.78 ATOM 390 O LYS 45 3.683 47.384 5.406 1.00 13.78 ATOM 391 CB LYS 45 2.289 50.644 4.840 1.00 13.78 ATOM 392 CG LYS 45 1.723 50.239 3.479 1.00 13.78 ATOM 393 CD LYS 45 1.408 51.475 2.635 1.00 13.78 ATOM 394 CE LYS 45 0.878 51.068 1.261 1.00 13.78 ATOM 395 NZ LYS 45 0.578 52.279 0.454 1.00 13.78 TER END