####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS163_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS163_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 34 9 - 42 4.93 6.88 LONGEST_CONTINUOUS_SEGMENT: 34 10 - 43 4.91 7.02 LCS_AVERAGE: 71.69 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 2.00 8.58 LCS_AVERAGE: 25.93 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.53 7.65 LCS_AVERAGE: 16.17 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 13 3 5 6 8 11 12 15 21 24 26 28 30 31 33 34 36 37 38 39 40 LCS_GDT V 3 V 3 4 7 23 3 5 8 14 18 21 23 24 26 27 29 30 32 34 34 36 38 39 40 40 LCS_GDT Q 4 Q 4 4 7 24 8 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT G 5 G 5 4 7 24 1 5 6 8 10 14 16 21 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT P 6 P 6 4 7 24 3 5 7 8 11 14 16 20 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT W 7 W 7 4 7 24 3 5 7 8 11 14 16 20 24 27 29 30 31 33 34 36 38 39 39 40 LCS_GDT V 8 V 8 4 11 24 3 5 6 8 11 14 16 22 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT G 9 G 9 9 12 34 4 9 9 9 15 19 23 23 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT S 10 S 10 9 12 34 5 9 9 9 10 12 14 17 22 24 27 30 33 34 34 36 38 39 40 40 LCS_GDT S 11 S 11 9 12 34 5 9 9 9 10 12 17 20 23 25 27 30 33 34 34 36 38 39 40 40 LCS_GDT Y 12 Y 12 9 12 34 5 9 9 9 10 12 17 20 23 25 27 30 33 34 34 36 38 39 40 40 LCS_GDT V 13 V 13 9 12 34 5 9 9 9 10 14 17 20 23 25 27 30 33 34 34 36 38 39 40 40 LCS_GDT A 14 A 14 9 12 34 5 9 9 9 10 12 14 17 20 23 25 26 31 32 34 35 38 39 40 40 LCS_GDT E 15 E 15 9 12 34 4 9 9 9 10 12 14 15 18 21 23 24 27 32 33 33 36 38 40 40 LCS_GDT T 16 T 16 9 12 34 4 9 9 9 10 12 14 15 18 21 23 24 31 32 33 35 38 39 40 40 LCS_GDT G 17 G 17 9 12 34 4 9 9 9 10 12 14 16 20 24 26 30 33 34 34 35 38 39 40 40 LCS_GDT Q 18 Q 18 3 12 34 3 3 4 7 10 12 14 19 22 24 27 30 33 34 34 36 38 39 40 40 LCS_GDT N 19 N 19 3 13 34 3 3 4 6 9 12 15 20 23 25 27 30 33 34 34 36 38 39 40 40 LCS_GDT W 20 W 20 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT A 21 A 21 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT S 22 S 22 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT L 23 L 23 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT A 24 A 24 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT A 25 A 25 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT N 26 N 26 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT E 27 E 27 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT L 28 L 28 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT R 29 R 29 12 16 34 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT V 30 V 30 12 16 34 8 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT T 31 T 31 12 16 34 8 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT E 32 E 32 3 16 34 3 3 6 7 9 15 20 24 25 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT R 33 R 33 3 16 34 3 3 3 13 15 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT P 34 P 34 3 16 34 3 3 4 5 11 14 20 24 25 26 29 30 31 33 34 36 38 39 40 40 LCS_GDT F 35 F 35 3 16 34 3 3 4 13 17 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT W 36 W 36 5 7 34 4 5 7 8 10 13 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT I 37 I 37 5 7 34 4 4 7 8 15 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT S 38 S 38 5 7 34 4 4 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT S 39 S 39 5 7 34 4 4 7 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT F 40 F 40 5 7 34 4 4 7 12 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT I 41 I 41 5 7 34 4 11 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 LCS_GDT G 42 G 42 3 7 34 3 3 4 7 9 11 17 19 23 25 28 30 31 33 34 36 38 39 40 40 LCS_GDT R 43 R 43 3 4 34 3 3 4 5 6 7 11 14 20 21 25 27 31 32 33 34 36 38 40 40 LCS_GDT S 44 S 44 3 4 28 0 3 3 4 6 7 10 10 12 13 14 14 23 23 28 29 32 35 37 39 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 6 7 10 10 12 13 14 14 15 19 19 19 19 20 20 21 LCS_AVERAGE LCS_A: 37.93 ( 16.17 25.93 71.69 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 13 14 15 18 21 23 24 26 27 29 30 33 34 34 36 38 39 40 40 GDT PERCENT_AT 22.73 29.55 31.82 34.09 40.91 47.73 52.27 54.55 59.09 61.36 65.91 68.18 75.00 77.27 77.27 81.82 86.36 88.64 90.91 90.91 GDT RMS_LOCAL 0.36 0.56 0.75 0.86 1.36 1.74 2.02 2.32 2.63 2.77 3.03 3.27 4.38 4.42 4.10 4.51 5.15 5.27 5.58 5.44 GDT RMS_ALL_AT 7.60 7.80 7.70 7.70 7.82 8.00 7.94 8.22 8.16 8.20 8.35 8.36 7.13 7.12 7.65 7.33 6.94 7.02 6.86 6.95 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.660 0 0.596 0.588 8.940 0.455 0.364 - LGA V 3 V 3 2.527 0 0.284 0.287 4.214 34.091 28.312 3.257 LGA Q 4 Q 4 0.564 0 0.318 0.924 7.211 53.182 32.121 6.901 LGA G 5 G 5 5.962 0 0.327 0.327 8.353 1.364 1.364 - LGA P 6 P 6 6.522 0 0.069 0.442 7.124 0.000 0.000 6.263 LGA W 7 W 7 7.221 0 0.466 0.410 10.437 0.000 0.000 9.094 LGA V 8 V 8 5.563 0 0.167 0.266 8.230 1.818 1.039 5.571 LGA G 9 G 9 4.213 0 0.516 0.516 5.970 4.091 4.091 - LGA S 10 S 10 10.591 0 0.135 0.189 12.600 0.000 0.000 11.533 LGA S 11 S 11 11.171 0 0.091 0.725 12.954 0.000 0.000 12.278 LGA Y 12 Y 12 8.642 0 0.065 1.011 10.179 0.000 0.000 7.720 LGA V 13 V 13 9.238 0 0.100 0.483 13.150 0.000 0.000 11.972 LGA A 14 A 14 16.401 0 0.049 0.046 18.968 0.000 0.000 - LGA E 15 E 15 18.255 0 0.287 0.948 19.912 0.000 0.000 19.355 LGA T 16 T 16 16.134 0 0.220 0.350 17.007 0.000 0.000 11.413 LGA G 17 G 17 15.315 0 0.614 0.614 15.315 0.000 0.000 - LGA Q 18 Q 18 11.697 0 0.662 1.000 15.270 0.000 0.000 15.270 LGA N 19 N 19 8.841 0 0.060 0.328 13.357 0.000 0.000 11.606 LGA W 20 W 20 1.521 0 0.618 1.290 10.195 43.182 15.844 10.195 LGA A 21 A 21 2.013 0 0.074 0.070 2.463 51.364 48.727 - LGA S 22 S 22 1.348 0 0.065 0.679 3.202 70.000 60.606 3.202 LGA L 23 L 23 0.348 0 0.047 1.399 3.832 90.909 67.500 2.989 LGA A 24 A 24 1.008 0 0.040 0.047 1.355 77.727 75.273 - LGA A 25 A 25 0.785 0 0.025 0.031 0.874 81.818 81.818 - LGA N 26 N 26 0.531 0 0.043 1.222 3.790 86.364 65.909 3.790 LGA E 27 E 27 0.685 0 0.047 0.191 1.266 81.818 78.182 1.266 LGA L 28 L 28 0.458 0 0.025 1.071 3.007 95.455 80.909 1.365 LGA R 29 R 29 0.603 0 0.036 1.635 8.613 82.273 43.471 8.613 LGA V 30 V 30 1.206 0 0.197 0.895 2.923 73.636 60.519 1.545 LGA T 31 T 31 0.392 0 0.408 0.382 2.636 82.727 63.896 2.419 LGA E 32 E 32 4.478 0 0.703 1.442 10.736 17.273 7.677 10.736 LGA R 33 R 33 2.756 0 0.063 1.163 11.100 13.636 5.950 11.100 LGA P 34 P 34 4.908 0 0.649 0.603 6.332 0.909 0.519 5.870 LGA F 35 F 35 2.594 0 0.617 0.843 11.190 24.545 9.421 11.190 LGA W 36 W 36 4.014 0 0.596 0.616 11.166 22.273 6.364 11.166 LGA I 37 I 37 3.155 0 0.068 1.492 7.206 40.455 24.545 3.296 LGA S 38 S 38 2.421 0 0.158 0.658 4.853 38.636 27.879 4.853 LGA S 39 S 39 2.535 0 0.136 0.713 5.149 31.364 23.939 5.149 LGA F 40 F 40 2.630 0 0.076 0.217 8.804 35.909 14.711 8.804 LGA I 41 I 41 2.430 0 0.592 0.872 6.126 27.273 15.000 6.126 LGA G 42 G 42 8.107 0 0.134 0.134 12.576 0.000 0.000 - LGA R 43 R 43 12.383 0 0.555 1.585 20.305 0.000 0.000 20.305 LGA S 44 S 44 16.518 0 0.620 0.606 18.744 0.000 0.000 17.849 LGA K 45 K 45 20.451 0 0.377 0.684 29.778 0.000 0.000 29.778 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.731 6.693 8.233 28.740 21.499 8.987 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.32 50.000 45.368 0.992 LGA_LOCAL RMSD: 2.320 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.218 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.731 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.326503 * X + 0.033983 * Y + -0.944585 * Z + 25.078220 Y_new = 0.609670 * X + -0.771244 * Y + 0.182990 * Z + 38.515636 Z_new = -0.722287 * X + -0.635632 * Y + -0.272532 * Z + 88.544106 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.079122 0.807104 -1.975845 [DEG: 61.8291 46.2436 -113.2076 ] ZXZ: -1.762151 1.846820 -2.292466 [DEG: -100.9638 105.8150 -131.3486 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS163_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS163_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.32 45.368 6.73 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS163_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 9.490 42.953 9.694 1.00 0.00 ATOM 10 CA ALA 2 10.502 42.212 10.422 1.00 0.00 ATOM 11 CB ALA 2 10.479 42.634 11.882 1.00 0.00 ATOM 12 C ALA 2 10.252 40.712 10.368 1.00 0.00 ATOM 13 O ALA 2 11.168 39.922 10.130 1.00 0.00 ATOM 14 N VAL 3 8.996 40.290 10.541 1.00 0.00 ATOM 15 CA VAL 3 8.696 38.879 10.719 1.00 0.00 ATOM 16 CB VAL 3 7.425 38.698 11.606 1.00 0.00 ATOM 17 CG1 VAL 3 7.237 37.240 12.011 1.00 0.00 ATOM 18 CG2 VAL 3 7.458 39.565 12.858 1.00 0.00 ATOM 19 C VAL 3 8.540 38.245 9.338 1.00 0.00 ATOM 20 O VAL 3 7.434 37.903 8.921 1.00 0.00 ATOM 21 N GLN 4 9.628 38.082 8.575 1.00 0.00 ATOM 22 CA GLN 4 9.547 37.438 7.268 1.00 0.00 ATOM 23 CB GLN 4 10.790 37.686 6.404 1.00 0.00 ATOM 24 CG GLN 4 11.057 39.128 5.970 1.00 0.00 ATOM 25 CD GLN 4 9.912 39.822 5.243 1.00 0.00 ATOM 26 OE1 GLN 4 9.274 39.317 4.315 1.00 0.00 ATOM 27 NE2 GLN 4 9.634 41.047 5.650 1.00 0.00 ATOM 28 C GLN 4 9.262 35.941 7.378 1.00 0.00 ATOM 29 O GLN 4 10.144 35.083 7.313 1.00 0.00 ATOM 30 N GLY 5 7.982 35.643 7.591 1.00 0.00 ATOM 31 CA GLY 5 7.490 34.283 7.657 1.00 0.00 ATOM 32 C GLY 5 6.204 34.198 6.853 1.00 0.00 ATOM 33 O GLY 5 5.124 34.393 7.416 1.00 0.00 ATOM 34 N PRO 6 6.259 33.883 5.545 1.00 0.00 ATOM 35 CD PRO 6 7.475 33.465 4.851 1.00 0.00 ATOM 36 CA PRO 6 5.122 33.891 4.621 1.00 0.00 ATOM 37 CB PRO 6 5.704 33.278 3.366 1.00 0.00 ATOM 38 CG PRO 6 7.135 33.745 3.400 1.00 0.00 ATOM 39 C PRO 6 3.875 33.140 5.070 1.00 0.00 ATOM 40 O PRO 6 2.765 33.467 4.653 1.00 0.00 ATOM 41 N TRP 7 4.056 32.172 5.974 1.00 0.00 ATOM 42 CA TRP 7 2.981 31.387 6.573 1.00 0.00 ATOM 43 CB TRP 7 3.528 30.415 7.628 1.00 0.00 ATOM 44 CG TRP 7 4.892 29.800 7.325 1.00 0.00 ATOM 45 CD2 TRP 7 5.248 28.955 6.304 1.00 0.00 ATOM 46 CE2 TRP 7 6.585 28.805 6.515 1.00 0.00 ATOM 47 CE3 TRP 7 4.671 28.644 5.096 1.00 0.00 ATOM 48 CD1 TRP 7 5.981 30.116 8.111 1.00 0.00 ATOM 49 NE1 TRP 7 7.011 29.496 7.576 1.00 0.00 ATOM 50 CZ2 TRP 7 7.452 28.334 5.561 1.00 0.00 ATOM 51 CZ3 TRP 7 5.517 28.142 4.121 1.00 0.00 ATOM 52 CH2 TRP 7 6.881 27.988 4.348 1.00 0.00 ATOM 53 C TRP 7 1.923 32.258 7.244 1.00 0.00 ATOM 54 O TRP 7 0.721 31.993 7.173 1.00 0.00 ATOM 55 N VAL 8 2.393 33.335 7.876 1.00 0.00 ATOM 56 CA VAL 8 1.532 34.264 8.592 1.00 0.00 ATOM 57 CB VAL 8 2.252 34.623 9.925 1.00 0.00 ATOM 58 CG1 VAL 8 1.395 35.466 10.850 1.00 0.00 ATOM 59 CG2 VAL 8 2.670 33.378 10.697 1.00 0.00 ATOM 60 C VAL 8 1.239 35.485 7.706 1.00 0.00 ATOM 61 O VAL 8 0.553 36.431 8.100 1.00 0.00 ATOM 62 N GLY 9 1.708 35.471 6.455 1.00 0.00 ATOM 63 CA GLY 9 1.620 36.625 5.581 1.00 0.00 ATOM 64 C GLY 9 0.370 36.595 4.721 1.00 0.00 ATOM 65 O GLY 9 -0.190 35.533 4.429 1.00 0.00 ATOM 66 N SER 10 0.030 37.802 4.255 1.00 0.00 ATOM 67 CA SER 10 -1.192 38.122 3.528 1.00 0.00 ATOM 68 CB SER 10 -0.969 39.459 2.817 1.00 0.00 ATOM 69 OG SER 10 0.360 39.562 2.309 1.00 0.00 ATOM 70 C SER 10 -1.715 37.066 2.563 1.00 0.00 ATOM 71 O SER 10 -2.881 36.667 2.635 1.00 0.00 ATOM 72 N SER 11 -0.824 36.557 1.707 1.00 0.00 ATOM 73 CA SER 11 -1.163 35.465 0.812 1.00 0.00 ATOM 74 CB SER 11 0.008 35.112 -0.086 1.00 0.00 ATOM 75 OG SER 11 0.448 36.270 -0.775 1.00 0.00 ATOM 76 C SER 11 -1.682 34.209 1.484 1.00 0.00 ATOM 77 O SER 11 -2.827 33.808 1.268 1.00 0.00 ATOM 78 N TYR 12 -0.873 33.627 2.368 1.00 0.00 ATOM 79 CA TYR 12 -1.143 32.311 2.929 1.00 0.00 ATOM 80 CB TYR 12 0.104 31.896 3.675 1.00 0.00 ATOM 81 CG TYR 12 0.498 30.437 3.534 1.00 0.00 ATOM 82 CD1 TYR 12 0.766 29.885 2.295 1.00 0.00 ATOM 83 CE1 TYR 12 1.250 28.596 2.205 1.00 0.00 ATOM 84 CD2 TYR 12 0.683 29.699 4.678 1.00 0.00 ATOM 85 CE2 TYR 12 1.193 28.427 4.595 1.00 0.00 ATOM 86 CZ TYR 12 1.461 27.879 3.363 1.00 0.00 ATOM 87 OH TYR 12 1.927 26.583 3.311 1.00 0.00 ATOM 88 C TYR 12 -2.344 32.376 3.868 1.00 0.00 ATOM 89 O TYR 12 -3.238 31.522 3.869 1.00 0.00 ATOM 90 N VAL 13 -2.341 33.490 4.605 1.00 0.00 ATOM 91 CA VAL 13 -3.396 33.871 5.520 1.00 0.00 ATOM 92 CB VAL 13 -2.835 35.113 6.260 1.00 0.00 ATOM 93 CG1 VAL 13 -3.710 36.357 6.317 1.00 0.00 ATOM 94 CG2 VAL 13 -2.428 34.661 7.645 1.00 0.00 ATOM 95 C VAL 13 -4.762 34.059 4.862 1.00 0.00 ATOM 96 O VAL 13 -5.792 33.821 5.500 1.00 0.00 ATOM 97 N ALA 14 -4.811 34.510 3.607 1.00 0.00 ATOM 98 CA ALA 14 -6.075 34.593 2.895 1.00 0.00 ATOM 99 CB ALA 14 -6.040 35.740 1.911 1.00 0.00 ATOM 100 C ALA 14 -6.466 33.336 2.137 1.00 0.00 ATOM 101 O ALA 14 -7.585 32.851 2.289 1.00 0.00 ATOM 102 N GLU 15 -5.540 32.731 1.382 1.00 0.00 ATOM 103 CA GLU 15 -5.848 31.675 0.418 1.00 0.00 ATOM 104 CB GLU 15 -4.651 31.535 -0.519 1.00 0.00 ATOM 105 CG GLU 15 -3.362 31.010 0.107 1.00 0.00 ATOM 106 CD GLU 15 -2.089 31.266 -0.689 1.00 0.00 ATOM 107 OE1 GLU 15 -2.057 32.109 -1.596 1.00 0.00 ATOM 108 OE2 GLU 15 -1.089 30.618 -0.412 1.00 0.00 ATOM 109 C GLU 15 -6.298 30.297 0.926 1.00 0.00 ATOM 110 O GLU 15 -6.267 29.299 0.201 1.00 0.00 ATOM 111 N THR 16 -6.738 30.229 2.179 1.00 0.00 ATOM 112 CA THR 16 -7.087 28.990 2.854 1.00 0.00 ATOM 113 CB THR 16 -5.898 28.499 3.711 1.00 0.00 ATOM 114 OG1 THR 16 -5.356 29.647 4.376 1.00 0.00 ATOM 115 CG2 THR 16 -4.846 27.739 2.911 1.00 0.00 ATOM 116 C THR 16 -8.308 29.274 3.721 1.00 0.00 ATOM 117 O THR 16 -9.352 28.621 3.628 1.00 0.00 ATOM 118 N GLY 17 -8.149 30.270 4.594 1.00 0.00 ATOM 119 CA GLY 17 -9.258 30.848 5.321 1.00 0.00 ATOM 120 C GLY 17 -8.747 31.903 6.281 1.00 0.00 ATOM 121 O GLY 17 -7.767 31.686 6.996 1.00 0.00 ATOM 122 N GLN 18 -9.427 33.050 6.345 1.00 0.00 ATOM 123 CA GLN 18 -9.046 34.140 7.241 1.00 0.00 ATOM 124 CB GLN 18 -9.826 35.406 6.887 1.00 0.00 ATOM 125 CG GLN 18 -9.529 35.982 5.497 1.00 0.00 ATOM 126 CD GLN 18 -8.252 36.808 5.361 1.00 0.00 ATOM 127 OE1 GLN 18 -8.294 37.983 5.001 1.00 0.00 ATOM 128 NE2 GLN 18 -7.049 36.297 5.582 1.00 0.00 ATOM 129 C GLN 18 -9.172 33.810 8.730 1.00 0.00 ATOM 130 O GLN 18 -8.760 34.580 9.600 1.00 0.00 ATOM 131 N ASN 19 -9.711 32.629 9.045 1.00 0.00 ATOM 132 CA ASN 19 -9.675 32.044 10.384 1.00 0.00 ATOM 133 CB ASN 19 -10.368 30.679 10.427 1.00 0.00 ATOM 134 CG ASN 19 -11.612 30.546 9.560 1.00 0.00 ATOM 135 OD1 ASN 19 -11.551 30.726 8.343 1.00 0.00 ATOM 136 ND2 ASN 19 -12.769 30.226 10.111 1.00 0.00 ATOM 137 C ASN 19 -8.219 31.820 10.780 1.00 0.00 ATOM 138 O ASN 19 -7.822 32.072 11.922 1.00 0.00 ATOM 139 N TRP 20 -7.401 31.371 9.814 1.00 0.00 ATOM 140 CA TRP 20 -5.964 31.267 10.008 1.00 0.00 ATOM 141 CB TRP 20 -5.291 30.567 8.814 1.00 0.00 ATOM 142 CG TRP 20 -3.762 30.533 8.826 1.00 0.00 ATOM 143 CD2 TRP 20 -2.912 30.021 9.775 1.00 0.00 ATOM 144 CE2 TRP 20 -1.690 30.339 9.271 1.00 0.00 ATOM 145 CE3 TRP 20 -3.077 29.685 11.101 1.00 0.00 ATOM 146 CD1 TRP 20 -3.050 31.107 7.794 1.00 0.00 ATOM 147 NE1 TRP 20 -1.778 30.986 8.102 1.00 0.00 ATOM 148 CZ2 TRP 20 -0.542 30.361 10.019 1.00 0.00 ATOM 149 CZ3 TRP 20 -1.930 29.669 11.876 1.00 0.00 ATOM 150 CH2 TRP 20 -0.687 30.001 11.348 1.00 0.00 ATOM 151 C TRP 20 -5.359 32.641 10.264 1.00 0.00 ATOM 152 O TRP 20 -4.486 32.748 11.121 1.00 0.00 ATOM 153 N ALA 21 -5.814 33.699 9.583 1.00 0.00 ATOM 154 CA ALA 21 -5.378 35.059 9.888 1.00 0.00 ATOM 155 CB ALA 21 -6.092 36.074 9.012 1.00 0.00 ATOM 156 C ALA 21 -5.635 35.453 11.336 1.00 0.00 ATOM 157 O ALA 21 -4.737 35.980 11.994 1.00 0.00 ATOM 158 N SER 22 -6.835 35.171 11.858 1.00 0.00 ATOM 159 CA SER 22 -7.113 35.331 13.278 1.00 0.00 ATOM 160 CB SER 22 -8.551 34.946 13.579 1.00 0.00 ATOM 161 OG SER 22 -9.409 36.045 13.314 1.00 0.00 ATOM 162 C SER 22 -6.168 34.574 14.202 1.00 0.00 ATOM 163 O SER 22 -5.580 35.176 15.105 1.00 0.00 ATOM 164 N LEU 23 -5.967 33.271 13.965 1.00 0.00 ATOM 165 CA LEU 23 -5.078 32.466 14.794 1.00 0.00 ATOM 166 CB LEU 23 -5.179 30.993 14.392 1.00 0.00 ATOM 167 CG LEU 23 -4.422 29.935 15.197 1.00 0.00 ATOM 168 CD1 LEU 23 -4.861 29.921 16.656 1.00 0.00 ATOM 169 CD2 LEU 23 -4.633 28.563 14.582 1.00 0.00 ATOM 170 C LEU 23 -3.629 32.942 14.724 1.00 0.00 ATOM 171 O LEU 23 -2.945 33.042 15.742 1.00 0.00 ATOM 172 N ALA 24 -3.170 33.284 13.522 1.00 0.00 ATOM 173 CA ALA 24 -1.823 33.780 13.298 1.00 0.00 ATOM 174 CB ALA 24 -1.613 33.940 11.805 1.00 0.00 ATOM 175 C ALA 24 -1.582 35.128 13.966 1.00 0.00 ATOM 176 O ALA 24 -0.567 35.312 14.640 1.00 0.00 ATOM 177 N ALA 25 -2.528 36.067 13.833 1.00 0.00 ATOM 178 CA ALA 25 -2.455 37.351 14.520 1.00 0.00 ATOM 179 CB ALA 25 -3.656 38.210 14.151 1.00 0.00 ATOM 180 C ALA 25 -2.451 37.193 16.033 1.00 0.00 ATOM 181 O ALA 25 -1.689 37.855 16.745 1.00 0.00 ATOM 182 N ASN 26 -3.283 36.261 16.512 1.00 0.00 ATOM 183 CA ASN 26 -3.328 35.909 17.920 1.00 0.00 ATOM 184 CB ASN 26 -4.418 34.882 18.178 1.00 0.00 ATOM 185 CG ASN 26 -4.780 34.777 19.647 1.00 0.00 ATOM 186 OD1 ASN 26 -4.174 34.043 20.423 1.00 0.00 ATOM 187 ND2 ASN 26 -5.793 35.520 20.071 1.00 0.00 ATOM 188 C ASN 26 -1.991 35.354 18.391 1.00 0.00 ATOM 189 O ASN 26 -1.497 35.777 19.435 1.00 0.00 ATOM 190 N GLU 27 -1.359 34.453 17.629 1.00 0.00 ATOM 191 CA GLU 27 -0.053 33.918 17.995 1.00 0.00 ATOM 192 CB GLU 27 0.223 32.583 17.306 1.00 0.00 ATOM 193 CG GLU 27 -0.746 31.464 17.703 1.00 0.00 ATOM 194 CD GLU 27 -0.909 31.254 19.204 1.00 0.00 ATOM 195 OE1 GLU 27 -0.027 30.681 19.845 1.00 0.00 ATOM 196 OE2 GLU 27 -1.931 31.669 19.754 1.00 0.00 ATOM 197 C GLU 27 1.116 34.876 17.816 1.00 0.00 ATOM 198 O GLU 27 2.175 34.692 18.414 1.00 0.00 ATOM 199 N LEU 28 0.954 35.907 16.984 1.00 0.00 ATOM 200 CA LEU 28 1.866 37.043 17.005 1.00 0.00 ATOM 201 CB LEU 28 1.979 37.686 15.627 1.00 0.00 ATOM 202 CG LEU 28 3.093 37.198 14.710 1.00 0.00 ATOM 203 CD1 LEU 28 2.917 35.742 14.306 1.00 0.00 ATOM 204 CD2 LEU 28 3.149 38.080 13.481 1.00 0.00 ATOM 205 C LEU 28 1.510 38.092 18.055 1.00 0.00 ATOM 206 O LEU 28 2.121 39.158 18.128 1.00 0.00 ATOM 207 N ARG 29 0.491 37.785 18.869 1.00 0.00 ATOM 208 CA ARG 29 0.057 38.566 20.022 1.00 0.00 ATOM 209 CB ARG 29 1.105 38.520 21.155 1.00 0.00 ATOM 210 CG ARG 29 1.585 37.116 21.548 1.00 0.00 ATOM 211 CD ARG 29 0.461 36.191 21.999 1.00 0.00 ATOM 212 NE ARG 29 0.936 34.820 22.123 1.00 0.00 ATOM 213 CZ ARG 29 0.195 33.763 21.782 1.00 0.00 ATOM 214 NH1 ARG 29 0.701 32.549 21.962 1.00 0.00 ATOM 215 NH2 ARG 29 -0.996 33.896 21.204 1.00 0.00 ATOM 216 C ARG 29 -0.379 39.989 19.686 1.00 0.00 ATOM 217 O ARG 29 -0.328 40.910 20.505 1.00 0.00 ATOM 218 N VAL 30 -0.870 40.157 18.456 1.00 0.00 ATOM 219 CA VAL 30 -1.320 41.452 17.983 1.00 0.00 ATOM 220 CB VAL 30 -0.593 41.793 16.656 1.00 0.00 ATOM 221 CG1 VAL 30 -1.090 41.011 15.447 1.00 0.00 ATOM 222 CG2 VAL 30 -0.589 43.293 16.430 1.00 0.00 ATOM 223 C VAL 30 -2.845 41.425 17.893 1.00 0.00 ATOM 224 O VAL 30 -3.447 40.347 17.865 1.00 0.00 ATOM 225 N THR 31 -3.519 42.576 17.828 1.00 0.00 ATOM 226 CA THR 31 -4.955 42.649 18.061 1.00 0.00 ATOM 227 CB THR 31 -5.308 44.086 18.519 1.00 0.00 ATOM 228 OG1 THR 31 -4.981 44.941 17.428 1.00 0.00 ATOM 229 CG2 THR 31 -4.587 44.512 19.791 1.00 0.00 ATOM 230 C THR 31 -5.832 42.193 16.892 1.00 0.00 ATOM 231 O THR 31 -6.521 43.009 16.272 1.00 0.00 ATOM 232 N GLU 32 -5.778 40.904 16.533 1.00 0.00 ATOM 233 CA GLU 32 -6.664 40.254 15.569 1.00 0.00 ATOM 234 CB GLU 32 -8.075 40.113 16.143 1.00 0.00 ATOM 235 CG GLU 32 -8.185 39.148 17.327 1.00 0.00 ATOM 236 CD GLU 32 -7.850 37.693 17.016 1.00 0.00 ATOM 237 OE1 GLU 32 -8.385 37.145 16.049 1.00 0.00 ATOM 238 OE2 GLU 32 -7.064 37.105 17.762 1.00 0.00 ATOM 239 C GLU 32 -6.757 40.720 14.116 1.00 0.00 ATOM 240 O GLU 32 -7.103 39.909 13.257 1.00 0.00 ATOM 241 N ARG 33 -6.461 41.981 13.788 1.00 0.00 ATOM 242 CA ARG 33 -6.656 42.520 12.451 1.00 0.00 ATOM 243 CB ARG 33 -6.493 44.037 12.455 1.00 0.00 ATOM 244 CG ARG 33 -7.477 44.751 13.366 1.00 0.00 ATOM 245 CD ARG 33 -7.184 46.237 13.366 1.00 0.00 ATOM 246 NE ARG 33 -8.020 46.931 14.333 1.00 0.00 ATOM 247 CZ ARG 33 -7.830 48.210 14.663 1.00 0.00 ATOM 248 NH1 ARG 33 -8.647 48.760 15.553 1.00 0.00 ATOM 249 NH2 ARG 33 -6.850 48.933 14.130 1.00 0.00 ATOM 250 C ARG 33 -5.701 41.909 11.433 1.00 0.00 ATOM 251 O ARG 33 -4.482 42.033 11.580 1.00 0.00 ATOM 252 N PRO 34 -6.203 41.266 10.368 1.00 0.00 ATOM 253 CD PRO 34 -7.628 41.061 10.117 1.00 0.00 ATOM 254 CA PRO 34 -5.393 40.609 9.345 1.00 0.00 ATOM 255 CB PRO 34 -6.448 40.047 8.421 1.00 0.00 ATOM 256 CG PRO 34 -7.623 39.777 9.317 1.00 0.00 ATOM 257 C PRO 34 -4.415 41.523 8.610 1.00 0.00 ATOM 258 O PRO 34 -3.405 41.061 8.072 1.00 0.00 ATOM 259 N PHE 35 -4.724 42.823 8.555 1.00 0.00 ATOM 260 CA PHE 35 -3.789 43.847 8.113 1.00 0.00 ATOM 261 CB PHE 35 -4.498 45.208 8.091 1.00 0.00 ATOM 262 CG PHE 35 -3.625 46.381 7.656 1.00 0.00 ATOM 263 CD1 PHE 35 -3.007 46.376 6.419 1.00 0.00 ATOM 264 CD2 PHE 35 -3.414 47.430 8.532 1.00 0.00 ATOM 265 CE1 PHE 35 -2.156 47.404 6.081 1.00 0.00 ATOM 266 CE2 PHE 35 -2.565 48.458 8.178 1.00 0.00 ATOM 267 CZ PHE 35 -1.930 48.443 6.957 1.00 0.00 ATOM 268 C PHE 35 -2.527 43.914 8.967 1.00 0.00 ATOM 269 O PHE 35 -1.434 44.088 8.421 1.00 0.00 ATOM 270 N TRP 36 -2.645 43.753 10.292 1.00 0.00 ATOM 271 CA TRP 36 -1.492 43.837 11.176 1.00 0.00 ATOM 272 CB TRP 36 -1.866 43.663 12.644 1.00 0.00 ATOM 273 CG TRP 36 -2.661 44.774 13.325 1.00 0.00 ATOM 274 CD2 TRP 36 -2.757 46.115 13.031 1.00 0.00 ATOM 275 CE2 TRP 36 -3.499 46.583 14.068 1.00 0.00 ATOM 276 CE3 TRP 36 -2.107 46.968 12.169 1.00 0.00 ATOM 277 CD1 TRP 36 -3.346 44.485 14.489 1.00 0.00 ATOM 278 NE1 TRP 36 -3.834 45.623 14.934 1.00 0.00 ATOM 279 CZ2 TRP 36 -3.671 47.916 14.343 1.00 0.00 ATOM 280 CZ3 TRP 36 -2.280 48.323 12.403 1.00 0.00 ATOM 281 CH2 TRP 36 -3.047 48.790 13.467 1.00 0.00 ATOM 282 C TRP 36 -0.441 42.805 10.819 1.00 0.00 ATOM 283 O TRP 36 0.733 43.142 10.684 1.00 0.00 ATOM 284 N ILE 37 -0.862 41.558 10.599 1.00 0.00 ATOM 285 CA ILE 37 0.065 40.529 10.155 1.00 0.00 ATOM 286 CB ILE 37 -0.454 39.102 10.393 1.00 0.00 ATOM 287 CG2 ILE 37 -0.337 38.821 11.883 1.00 0.00 ATOM 288 CG1 ILE 37 -1.850 38.852 9.844 1.00 0.00 ATOM 289 CD1 ILE 37 -2.373 37.427 10.069 1.00 0.00 ATOM 290 C ILE 37 0.580 40.735 8.738 1.00 0.00 ATOM 291 O ILE 37 1.751 40.443 8.491 1.00 0.00 ATOM 292 N SER 38 -0.219 41.278 7.805 1.00 0.00 ATOM 293 CA SER 38 0.309 41.754 6.528 1.00 0.00 ATOM 294 CB SER 38 -0.759 42.475 5.713 1.00 0.00 ATOM 295 OG SER 38 -1.757 41.673 5.093 1.00 0.00 ATOM 296 C SER 38 1.491 42.706 6.708 1.00 0.00 ATOM 297 O SER 38 2.546 42.511 6.101 1.00 0.00 ATOM 298 N SER 39 1.350 43.724 7.565 1.00 0.00 ATOM 299 CA SER 39 2.440 44.643 7.855 1.00 0.00 ATOM 300 CB SER 39 1.899 45.907 8.506 1.00 0.00 ATOM 301 OG SER 39 1.192 46.668 7.537 1.00 0.00 ATOM 302 C SER 39 3.589 44.073 8.673 1.00 0.00 ATOM 303 O SER 39 4.746 44.408 8.415 1.00 0.00 ATOM 304 N PHE 40 3.305 43.203 9.647 1.00 0.00 ATOM 305 CA PHE 40 4.326 42.568 10.473 1.00 0.00 ATOM 306 CB PHE 40 3.695 41.771 11.614 1.00 0.00 ATOM 307 CG PHE 40 3.401 42.558 12.885 1.00 0.00 ATOM 308 CD1 PHE 40 3.636 41.952 14.105 1.00 0.00 ATOM 309 CD2 PHE 40 2.910 43.851 12.843 1.00 0.00 ATOM 310 CE1 PHE 40 3.386 42.640 15.274 1.00 0.00 ATOM 311 CE2 PHE 40 2.662 44.531 14.016 1.00 0.00 ATOM 312 CZ PHE 40 2.902 43.928 15.231 1.00 0.00 ATOM 313 C PHE 40 5.232 41.648 9.676 1.00 0.00 ATOM 314 O PHE 40 6.460 41.671 9.835 1.00 0.00 ATOM 315 N ILE 41 4.613 40.856 8.797 1.00 0.00 ATOM 316 CA ILE 41 5.352 39.973 7.918 1.00 0.00 ATOM 317 CB ILE 41 4.472 38.782 7.420 1.00 0.00 ATOM 318 CG2 ILE 41 5.078 38.050 6.227 1.00 0.00 ATOM 319 CG1 ILE 41 4.264 37.722 8.500 1.00 0.00 ATOM 320 CD1 ILE 41 3.588 38.143 9.813 1.00 0.00 ATOM 321 C ILE 41 5.982 40.769 6.788 1.00 0.00 ATOM 322 O ILE 41 7.141 40.538 6.449 1.00 0.00 ATOM 323 N GLY 42 5.266 41.693 6.145 1.00 0.00 ATOM 324 CA GLY 42 5.841 42.481 5.066 1.00 0.00 ATOM 325 C GLY 42 5.895 41.729 3.741 1.00 0.00 ATOM 326 O GLY 42 5.807 42.348 2.679 1.00 0.00 ATOM 327 N ARG 43 6.116 40.407 3.767 1.00 0.00 ATOM 328 CA ARG 43 5.899 39.511 2.635 1.00 0.00 ATOM 329 CB ARG 43 4.404 39.499 2.254 1.00 0.00 ATOM 330 CG ARG 43 3.716 38.158 2.468 1.00 0.00 ATOM 331 CD ARG 43 4.103 37.150 1.394 1.00 0.00 ATOM 332 NE ARG 43 3.175 37.145 0.274 1.00 0.00 ATOM 333 CZ ARG 43 3.458 37.618 -0.943 1.00 0.00 ATOM 334 NH1 ARG 43 2.577 37.374 -1.902 1.00 0.00 ATOM 335 NH2 ARG 43 4.509 38.387 -1.198 1.00 0.00 ATOM 336 C ARG 43 6.798 39.782 1.430 1.00 0.00 ATOM 337 O ARG 43 6.407 39.562 0.281 1.00 0.00 ATOM 338 N SER 44 8.042 40.163 1.763 1.00 0.00 ATOM 339 CA SER 44 9.105 40.706 0.907 1.00 0.00 ATOM 340 CB SER 44 8.965 40.552 -0.618 1.00 0.00 ATOM 341 OG SER 44 8.790 39.198 -1.009 1.00 0.00 ATOM 342 C SER 44 9.374 42.177 1.189 1.00 0.00 ATOM 343 O SER 44 10.536 42.574 1.277 1.00 0.00 ATOM 344 N LYS 45 8.341 43.008 1.375 1.00 0.00 ATOM 345 CA LYS 45 8.537 44.449 1.468 1.00 0.00 ATOM 346 CB LYS 45 8.540 45.035 0.051 1.00 0.00 ATOM 347 CG LYS 45 9.356 46.306 -0.115 1.00 0.00 ATOM 348 CD LYS 45 9.236 46.809 -1.547 1.00 0.00 ATOM 349 CE LYS 45 7.993 47.669 -1.702 1.00 0.00 ATOM 350 NZ LYS 45 7.803 48.079 -3.080 1.00 0.00 ATOM 351 C LYS 45 7.423 45.023 2.343 1.00 0.00 ATOM 352 O LYS 45 7.489 44.869 3.562 1.00 0.00 TER END