####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS163_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS163_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 44 2 - 45 4.41 4.41 LCS_AVERAGE: 100.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 10 - 31 1.98 5.39 LCS_AVERAGE: 36.52 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.76 5.25 LCS_AVERAGE: 16.84 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 4 44 3 3 12 12 13 21 24 27 34 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 3 V 3 4 8 44 3 6 8 11 18 23 26 32 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 4 Q 4 4 8 44 3 5 8 15 19 24 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 5 G 5 4 8 44 4 6 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 6 P 6 3 8 44 3 3 4 6 16 24 29 33 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 7 W 7 3 8 44 3 3 4 6 12 23 29 33 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 8 V 8 3 11 44 3 3 4 7 16 24 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 9 G 9 9 20 44 8 9 10 13 18 22 28 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 10 S 10 9 22 44 8 9 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 11 S 11 9 22 44 8 9 10 16 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Y 12 Y 12 9 22 44 8 9 11 17 21 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 13 V 13 9 22 44 8 9 14 16 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 14 A 14 9 22 44 8 9 10 15 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 15 E 15 9 22 44 8 9 10 15 19 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 16 T 16 9 22 44 8 9 10 16 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 17 G 17 9 22 44 5 9 10 16 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT Q 18 Q 18 4 22 44 3 3 4 9 17 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 19 N 19 3 22 44 3 5 5 8 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 20 W 20 12 22 44 9 10 12 17 21 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 21 A 21 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 22 S 22 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 23 L 23 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 24 A 24 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT A 25 A 25 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT N 26 N 26 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 27 E 27 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT L 28 L 28 12 22 44 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 29 R 29 12 22 44 7 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT V 30 V 30 12 22 44 3 10 12 16 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT T 31 T 31 12 22 44 4 8 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT E 32 E 32 3 14 44 3 3 3 4 7 14 19 28 30 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 33 R 33 3 14 44 3 3 3 10 15 24 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT P 34 P 34 3 10 44 3 3 3 5 9 13 16 23 28 32 37 39 41 42 42 43 43 43 43 43 LCS_GDT F 35 F 35 3 10 44 3 5 5 14 20 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT W 36 W 36 5 10 44 4 5 10 15 19 24 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 37 I 37 5 10 44 4 5 10 15 20 24 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 38 S 38 5 10 44 4 5 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT S 39 S 39 6 10 44 4 6 8 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT F 40 F 40 6 10 44 4 6 8 11 11 23 28 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT I 41 I 41 6 10 44 3 6 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 LCS_GDT G 42 G 42 6 10 44 3 6 8 11 11 13 15 28 32 37 39 40 41 42 42 43 43 43 43 43 LCS_GDT R 43 R 43 6 10 44 3 6 8 11 11 13 15 18 21 27 34 39 41 42 42 43 43 43 43 43 LCS_GDT S 44 S 44 6 10 44 3 6 8 11 11 12 15 17 18 20 26 32 36 37 42 43 43 43 43 43 LCS_GDT K 45 K 45 6 10 44 0 3 4 11 11 11 12 15 15 18 20 22 25 29 37 38 38 39 40 43 LCS_AVERAGE LCS_A: 51.12 ( 16.84 36.52 100.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 10 14 17 22 25 29 34 36 38 39 40 41 42 42 43 43 43 43 43 GDT PERCENT_AT 20.45 22.73 31.82 38.64 50.00 56.82 65.91 77.27 81.82 86.36 88.64 90.91 93.18 95.45 95.45 97.73 97.73 97.73 97.73 97.73 GDT RMS_LOCAL 0.36 0.39 1.11 1.40 1.75 1.93 2.24 2.58 2.75 2.94 3.05 3.22 3.36 3.60 3.60 3.90 3.90 3.90 3.90 3.90 GDT RMS_ALL_AT 5.72 5.69 4.62 4.61 4.78 4.81 5.00 4.88 4.80 4.78 4.70 4.61 4.60 4.52 4.52 4.45 4.45 4.45 4.45 4.45 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.736 0 0.360 0.411 7.141 0.000 0.000 - LGA V 3 V 3 4.759 0 0.205 1.032 5.342 3.636 2.597 5.342 LGA Q 4 Q 4 3.818 0 0.129 0.313 6.990 20.455 9.293 6.027 LGA G 5 G 5 2.031 0 0.420 0.420 5.306 19.091 19.091 - LGA P 6 P 6 5.057 0 0.078 0.192 6.933 0.455 0.260 6.933 LGA W 7 W 7 5.545 0 0.161 1.186 10.662 4.091 1.169 10.471 LGA V 8 V 8 3.819 0 0.096 0.824 7.044 17.727 11.169 4.274 LGA G 9 G 9 4.200 0 0.550 0.550 4.200 21.818 21.818 - LGA S 10 S 10 1.581 0 0.089 0.148 2.462 67.727 62.121 1.889 LGA S 11 S 11 2.051 0 0.062 0.779 3.041 45.000 41.515 1.555 LGA Y 12 Y 12 2.432 0 0.099 0.769 10.310 44.545 16.515 10.310 LGA V 13 V 13 1.270 0 0.070 1.123 5.344 61.818 46.494 5.344 LGA A 14 A 14 2.541 0 0.061 0.071 3.703 32.727 31.636 - LGA E 15 E 15 3.539 0 0.013 1.221 5.169 16.818 13.535 4.387 LGA T 16 T 16 2.078 0 0.181 0.300 2.497 41.364 48.052 0.995 LGA G 17 G 17 2.228 0 0.655 0.655 2.845 38.636 38.636 - LGA Q 18 Q 18 3.477 0 0.637 0.669 8.823 17.273 7.677 8.594 LGA N 19 N 19 3.158 0 0.416 0.993 8.850 29.545 15.000 7.124 LGA W 20 W 20 2.631 0 0.470 0.930 10.874 49.545 14.286 10.874 LGA A 21 A 21 0.625 0 0.052 0.056 1.149 82.273 82.182 - LGA S 22 S 22 1.341 0 0.076 0.571 2.119 69.545 66.364 0.911 LGA L 23 L 23 1.956 0 0.016 1.389 6.344 50.909 29.091 5.004 LGA A 24 A 24 1.645 0 0.038 0.040 1.779 58.182 56.727 - LGA A 25 A 25 0.747 0 0.032 0.037 1.090 77.727 78.545 - LGA N 26 N 26 0.180 0 0.034 0.496 1.446 100.000 86.818 1.446 LGA E 27 E 27 0.940 0 0.016 1.052 6.034 73.636 42.222 6.034 LGA L 28 L 28 1.589 0 0.183 1.366 5.575 51.364 32.273 5.575 LGA R 29 R 29 1.519 0 0.175 1.852 11.224 54.545 22.810 11.224 LGA V 30 V 30 2.011 0 0.355 1.040 3.030 44.545 38.961 3.030 LGA T 31 T 31 2.161 0 0.716 0.734 6.217 31.818 20.519 3.915 LGA E 32 E 32 5.929 0 0.322 0.964 10.620 4.091 1.818 9.926 LGA R 33 R 33 4.087 0 0.064 0.993 7.982 1.818 4.628 5.429 LGA P 34 P 34 6.645 0 0.614 0.623 7.638 0.000 0.000 7.367 LGA F 35 F 35 3.033 0 0.606 0.884 10.585 18.182 7.603 10.585 LGA W 36 W 36 3.803 0 0.606 0.537 10.049 26.818 7.662 10.049 LGA I 37 I 37 3.352 0 0.176 0.845 6.201 32.727 17.273 6.201 LGA S 38 S 38 1.826 0 0.098 0.628 5.269 42.727 30.303 5.269 LGA S 39 S 39 2.528 0 0.023 0.664 4.559 28.182 24.242 4.292 LGA F 40 F 40 3.753 0 0.172 0.491 10.301 14.545 5.785 9.828 LGA I 41 I 41 2.289 0 0.044 0.576 6.029 26.364 17.955 5.295 LGA G 42 G 42 8.107 0 0.226 0.226 10.804 0.000 0.000 - LGA R 43 R 43 10.256 0 0.230 1.434 13.579 0.000 0.000 13.579 LGA S 44 S 44 12.583 0 0.297 0.761 15.893 0.000 0.000 13.371 LGA K 45 K 45 17.014 0 0.548 0.816 20.490 0.000 0.000 20.435 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 4.410 4.447 6.014 32.324 24.424 10.753 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 34 2.58 59.091 56.787 1.267 LGA_LOCAL RMSD: 2.583 Number of atoms: 34 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 4.883 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 4.410 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.723298 * X + -0.507352 * Y + -0.468437 * Z + 31.945351 Y_new = 0.381837 * X + -0.271368 * Y + 0.883493 * Z + -31.218035 Z_new = -0.575361 * X + -0.817896 * Y + -0.002554 * Z + 92.975525 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.485726 0.613045 -1.573919 [DEG: 27.8301 35.1249 -90.1789 ] ZXZ: -2.654070 1.573351 -2.528545 [DEG: -152.0670 90.1464 -144.8750 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS163_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS163_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 34 2.58 56.787 4.41 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS163_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 8.563 41.604 12.412 1.00 0.00 ATOM 10 CA ALA 2 8.777 42.372 11.194 1.00 0.00 ATOM 11 CB ALA 2 9.021 43.824 11.579 1.00 0.00 ATOM 12 C ALA 2 9.894 41.863 10.282 1.00 0.00 ATOM 13 O ALA 2 11.021 42.365 10.241 1.00 0.00 ATOM 14 N VAL 3 9.564 40.783 9.576 1.00 0.00 ATOM 15 CA VAL 3 10.453 40.183 8.590 1.00 0.00 ATOM 16 CB VAL 3 10.493 38.642 8.750 1.00 0.00 ATOM 17 CG1 VAL 3 11.103 38.277 10.089 1.00 0.00 ATOM 18 CG2 VAL 3 9.143 37.968 8.572 1.00 0.00 ATOM 19 C VAL 3 10.089 40.606 7.168 1.00 0.00 ATOM 20 O VAL 3 9.267 41.505 6.997 1.00 0.00 ATOM 21 N GLN 4 10.673 40.022 6.115 1.00 0.00 ATOM 22 CA GLN 4 10.321 40.353 4.735 1.00 0.00 ATOM 23 CB GLN 4 11.567 40.316 3.873 1.00 0.00 ATOM 24 CG GLN 4 12.536 41.419 4.247 1.00 0.00 ATOM 25 CD GLN 4 13.980 41.125 3.884 1.00 0.00 ATOM 26 OE1 GLN 4 14.364 39.986 3.612 1.00 0.00 ATOM 27 NE2 GLN 4 14.840 42.129 3.929 1.00 0.00 ATOM 28 C GLN 4 9.258 39.437 4.137 1.00 0.00 ATOM 29 O GLN 4 8.775 38.531 4.815 1.00 0.00 ATOM 30 N GLY 5 8.872 39.672 2.873 1.00 0.00 ATOM 31 CA GLY 5 7.915 38.829 2.165 1.00 0.00 ATOM 32 C GLY 5 6.489 38.899 2.711 1.00 0.00 ATOM 33 O GLY 5 6.050 37.945 3.351 1.00 0.00 ATOM 34 N PRO 6 5.683 39.934 2.417 1.00 0.00 ATOM 35 CD PRO 6 5.910 40.840 1.295 1.00 0.00 ATOM 36 CA PRO 6 4.393 40.221 3.060 1.00 0.00 ATOM 37 CB PRO 6 3.889 41.423 2.281 1.00 0.00 ATOM 38 CG PRO 6 4.499 41.242 0.915 1.00 0.00 ATOM 39 C PRO 6 3.307 39.157 3.219 1.00 0.00 ATOM 40 O PRO 6 2.334 39.359 3.955 1.00 0.00 ATOM 41 N TRP 7 3.440 37.992 2.580 1.00 0.00 ATOM 42 CA TRP 7 2.443 36.940 2.677 1.00 0.00 ATOM 43 CB TRP 7 2.549 36.002 1.464 1.00 0.00 ATOM 44 CG TRP 7 1.572 34.828 1.468 1.00 0.00 ATOM 45 CD2 TRP 7 0.227 34.847 1.209 1.00 0.00 ATOM 46 CE2 TRP 7 -0.111 33.537 1.350 1.00 0.00 ATOM 47 CE3 TRP 7 -0.718 35.846 1.216 1.00 0.00 ATOM 48 CD1 TRP 7 2.004 33.546 1.743 1.00 0.00 ATOM 49 NE1 TRP 7 0.939 32.776 1.671 1.00 0.00 ATOM 50 CZ2 TRP 7 -1.404 33.103 1.505 1.00 0.00 ATOM 51 CZ3 TRP 7 -2.036 35.437 1.347 1.00 0.00 ATOM 52 CH2 TRP 7 -2.374 34.093 1.488 1.00 0.00 ATOM 53 C TRP 7 2.627 36.196 3.995 1.00 0.00 ATOM 54 O TRP 7 3.396 35.239 4.098 1.00 0.00 ATOM 55 N VAL 8 1.984 36.731 5.040 1.00 0.00 ATOM 56 CA VAL 8 1.772 36.104 6.348 1.00 0.00 ATOM 57 CB VAL 8 0.656 35.013 6.235 1.00 0.00 ATOM 58 CG1 VAL 8 1.161 33.625 5.851 1.00 0.00 ATOM 59 CG2 VAL 8 -0.195 34.968 7.495 1.00 0.00 ATOM 60 C VAL 8 2.978 35.629 7.173 1.00 0.00 ATOM 61 O VAL 8 2.855 35.406 8.378 1.00 0.00 ATOM 62 N GLY 9 4.172 35.521 6.587 1.00 0.00 ATOM 63 CA GLY 9 5.298 34.862 7.216 1.00 0.00 ATOM 64 C GLY 9 5.132 33.361 7.079 1.00 0.00 ATOM 65 O GLY 9 4.727 32.691 8.027 1.00 0.00 ATOM 66 N SER 10 5.442 32.818 5.900 1.00 0.00 ATOM 67 CA SER 10 5.356 31.388 5.629 1.00 0.00 ATOM 68 CB SER 10 5.841 31.139 4.205 1.00 0.00 ATOM 69 OG SER 10 6.929 32.000 3.881 1.00 0.00 ATOM 70 C SER 10 6.103 30.522 6.639 1.00 0.00 ATOM 71 O SER 10 5.606 29.493 7.102 1.00 0.00 ATOM 72 N SER 11 7.290 30.999 7.013 1.00 0.00 ATOM 73 CA SER 11 8.063 30.475 8.124 1.00 0.00 ATOM 74 CB SER 11 9.361 31.261 8.171 1.00 0.00 ATOM 75 OG SER 11 9.097 32.633 7.879 1.00 0.00 ATOM 76 C SER 11 7.326 30.577 9.455 1.00 0.00 ATOM 77 O SER 11 7.125 29.566 10.127 1.00 0.00 ATOM 78 N TYR 12 6.879 31.788 9.814 1.00 0.00 ATOM 79 CA TYR 12 6.138 32.066 11.044 1.00 0.00 ATOM 80 CB TYR 12 5.699 33.544 11.015 1.00 0.00 ATOM 81 CG TYR 12 4.935 34.128 12.205 1.00 0.00 ATOM 82 CD1 TYR 12 5.091 33.634 13.486 1.00 0.00 ATOM 83 CE1 TYR 12 4.442 34.222 14.551 1.00 0.00 ATOM 84 CD2 TYR 12 4.106 35.213 11.994 1.00 0.00 ATOM 85 CE2 TYR 12 3.450 35.806 13.055 1.00 0.00 ATOM 86 CZ TYR 12 3.623 35.304 14.327 1.00 0.00 ATOM 87 OH TYR 12 2.951 35.866 15.394 1.00 0.00 ATOM 88 C TYR 12 4.949 31.126 11.230 1.00 0.00 ATOM 89 O TYR 12 4.797 30.512 12.289 1.00 0.00 ATOM 90 N VAL 13 4.117 30.959 10.201 1.00 0.00 ATOM 91 CA VAL 13 2.979 30.053 10.276 1.00 0.00 ATOM 92 CB VAL 13 1.923 30.361 9.195 1.00 0.00 ATOM 93 CG1 VAL 13 1.371 31.758 9.421 1.00 0.00 ATOM 94 CG2 VAL 13 2.458 30.237 7.780 1.00 0.00 ATOM 95 C VAL 13 3.368 28.578 10.309 1.00 0.00 ATOM 96 O VAL 13 2.723 27.786 11.002 1.00 0.00 ATOM 97 N ALA 14 4.446 28.183 9.618 1.00 0.00 ATOM 98 CA ALA 14 4.990 26.835 9.748 1.00 0.00 ATOM 99 CB ALA 14 6.139 26.634 8.774 1.00 0.00 ATOM 100 C ALA 14 5.537 26.543 11.141 1.00 0.00 ATOM 101 O ALA 14 5.500 25.401 11.601 1.00 0.00 ATOM 102 N GLU 15 6.063 27.572 11.812 1.00 0.00 ATOM 103 CA GLU 15 6.538 27.460 13.183 1.00 0.00 ATOM 104 CB GLU 15 7.434 28.641 13.532 1.00 0.00 ATOM 105 CG GLU 15 8.723 28.732 12.729 1.00 0.00 ATOM 106 CD GLU 15 9.461 30.034 12.981 1.00 0.00 ATOM 107 OE1 GLU 15 10.228 30.096 13.947 1.00 0.00 ATOM 108 OE2 GLU 15 9.240 31.004 12.258 1.00 0.00 ATOM 109 C GLU 15 5.405 27.411 14.199 1.00 0.00 ATOM 110 O GLU 15 5.482 26.676 15.183 1.00 0.00 ATOM 111 N THR 16 4.361 28.216 13.992 1.00 0.00 ATOM 112 CA THR 16 3.270 28.310 14.950 1.00 0.00 ATOM 113 CB THR 16 2.654 29.718 14.942 1.00 0.00 ATOM 114 OG1 THR 16 2.388 30.057 13.586 1.00 0.00 ATOM 115 CG2 THR 16 3.598 30.725 15.570 1.00 0.00 ATOM 116 C THR 16 2.200 27.243 14.782 1.00 0.00 ATOM 117 O THR 16 1.840 26.553 15.738 1.00 0.00 ATOM 118 N GLY 17 1.664 27.111 13.570 1.00 0.00 ATOM 119 CA GLY 17 0.656 26.107 13.292 1.00 0.00 ATOM 120 C GLY 17 -0.251 26.551 12.161 1.00 0.00 ATOM 121 O GLY 17 -0.464 27.739 11.916 1.00 0.00 ATOM 122 N GLN 18 -0.884 25.571 11.520 1.00 0.00 ATOM 123 CA GLN 18 -1.538 25.792 10.240 1.00 0.00 ATOM 124 CB GLN 18 -1.668 24.460 9.497 1.00 0.00 ATOM 125 CG GLN 18 -0.309 23.855 9.134 1.00 0.00 ATOM 126 CD GLN 18 0.585 24.813 8.359 1.00 0.00 ATOM 127 OE1 GLN 18 0.276 25.216 7.244 1.00 0.00 ATOM 128 NE2 GLN 18 1.703 25.255 8.916 1.00 0.00 ATOM 129 C GLN 18 -2.832 26.598 10.187 1.00 0.00 ATOM 130 O GLN 18 -3.468 26.697 9.136 1.00 0.00 ATOM 131 N ASN 19 -3.228 27.277 11.269 1.00 0.00 ATOM 132 CA ASN 19 -4.414 28.125 11.238 1.00 0.00 ATOM 133 CB ASN 19 -5.145 28.053 12.580 1.00 0.00 ATOM 134 CG ASN 19 -6.597 28.504 12.497 1.00 0.00 ATOM 135 OD1 ASN 19 -7.516 27.707 12.661 1.00 0.00 ATOM 136 ND2 ASN 19 -6.892 29.770 12.241 1.00 0.00 ATOM 137 C ASN 19 -3.956 29.547 10.905 1.00 0.00 ATOM 138 O ASN 19 -4.281 30.533 11.580 1.00 0.00 ATOM 139 N TRP 20 -3.257 29.602 9.765 1.00 0.00 ATOM 140 CA TRP 20 -2.369 30.682 9.351 1.00 0.00 ATOM 141 CB TRP 20 -2.309 30.738 7.815 1.00 0.00 ATOM 142 CG TRP 20 -1.450 29.684 7.114 1.00 0.00 ATOM 143 CD2 TRP 20 -1.027 29.734 5.812 1.00 0.00 ATOM 144 CE2 TRP 20 -0.254 28.622 5.710 1.00 0.00 ATOM 145 CE3 TRP 20 -0.944 30.759 4.903 1.00 0.00 ATOM 146 CD1 TRP 20 -0.949 28.560 7.744 1.00 0.00 ATOM 147 NE1 TRP 20 -0.206 27.937 6.853 1.00 0.00 ATOM 148 CZ2 TRP 20 0.670 28.433 4.713 1.00 0.00 ATOM 149 CZ3 TRP 20 -0.040 30.580 3.868 1.00 0.00 ATOM 150 CH2 TRP 20 0.755 29.444 3.773 1.00 0.00 ATOM 151 C TRP 20 -2.533 32.085 9.933 1.00 0.00 ATOM 152 O TRP 20 -1.935 32.394 10.967 1.00 0.00 ATOM 153 N ALA 21 -3.377 32.926 9.326 1.00 0.00 ATOM 154 CA ALA 21 -3.488 34.332 9.689 1.00 0.00 ATOM 155 CB ALA 21 -4.482 35.006 8.759 1.00 0.00 ATOM 156 C ALA 21 -3.954 34.576 11.117 1.00 0.00 ATOM 157 O ALA 21 -3.415 35.431 11.822 1.00 0.00 ATOM 158 N SER 22 -4.939 33.787 11.557 1.00 0.00 ATOM 159 CA SER 22 -5.504 33.911 12.889 1.00 0.00 ATOM 160 CB SER 22 -6.688 32.966 13.022 1.00 0.00 ATOM 161 OG SER 22 -7.438 32.908 11.814 1.00 0.00 ATOM 162 C SER 22 -4.460 33.557 13.937 1.00 0.00 ATOM 163 O SER 22 -4.183 34.357 14.829 1.00 0.00 ATOM 164 N LEU 23 -3.806 32.397 13.802 1.00 0.00 ATOM 165 CA LEU 23 -2.848 31.956 14.803 1.00 0.00 ATOM 166 CB LEU 23 -2.481 30.493 14.583 1.00 0.00 ATOM 167 CG LEU 23 -1.737 29.748 15.688 1.00 0.00 ATOM 168 CD1 LEU 23 -2.471 29.832 17.020 1.00 0.00 ATOM 169 CD2 LEU 23 -1.572 28.296 15.295 1.00 0.00 ATOM 170 C LEU 23 -1.612 32.848 14.821 1.00 0.00 ATOM 171 O LEU 23 -1.057 33.122 15.886 1.00 0.00 ATOM 172 N ALA 24 -1.204 33.353 13.650 1.00 0.00 ATOM 173 CA ALA 24 -0.167 34.370 13.569 1.00 0.00 ATOM 174 CB ALA 24 0.074 34.729 12.112 1.00 0.00 ATOM 175 C ALA 24 -0.540 35.650 14.316 1.00 0.00 ATOM 176 O ALA 24 0.267 36.180 15.087 1.00 0.00 ATOM 177 N ALA 25 -1.770 36.149 14.125 1.00 0.00 ATOM 178 CA ALA 25 -2.248 37.335 14.826 1.00 0.00 ATOM 179 CB ALA 25 -3.641 37.702 14.340 1.00 0.00 ATOM 180 C ALA 25 -2.315 37.145 16.335 1.00 0.00 ATOM 181 O ALA 25 -1.947 38.036 17.103 1.00 0.00 ATOM 182 N ASN 26 -2.760 35.960 16.754 1.00 0.00 ATOM 183 CA ASN 26 -2.794 35.580 18.159 1.00 0.00 ATOM 184 CB ASN 26 -3.646 34.332 18.362 1.00 0.00 ATOM 185 CG ASN 26 -5.130 34.590 18.162 1.00 0.00 ATOM 186 OD1 ASN 26 -5.553 35.247 17.215 1.00 0.00 ATOM 187 ND2 ASN 26 -6.001 34.094 19.029 1.00 0.00 ATOM 188 C ASN 26 -1.425 35.366 18.784 1.00 0.00 ATOM 189 O ASN 26 -1.239 35.692 19.955 1.00 0.00 ATOM 190 N GLU 27 -0.441 34.842 18.044 1.00 0.00 ATOM 191 CA GLU 27 0.905 34.668 18.577 1.00 0.00 ATOM 192 CB GLU 27 1.710 33.718 17.697 1.00 0.00 ATOM 193 CG GLU 27 2.674 32.787 18.441 1.00 0.00 ATOM 194 CD GLU 27 3.923 33.412 19.055 1.00 0.00 ATOM 195 OE1 GLU 27 4.019 33.451 20.280 1.00 0.00 ATOM 196 OE2 GLU 27 4.821 33.814 18.312 1.00 0.00 ATOM 197 C GLU 27 1.625 36.004 18.718 1.00 0.00 ATOM 198 O GLU 27 2.487 36.150 19.582 1.00 0.00 ATOM 199 N LEU 28 1.316 36.979 17.859 1.00 0.00 ATOM 200 CA LEU 28 1.762 38.346 18.085 1.00 0.00 ATOM 201 CB LEU 28 1.745 39.104 16.755 1.00 0.00 ATOM 202 CG LEU 28 2.175 40.570 16.663 1.00 0.00 ATOM 203 CD1 LEU 28 3.567 40.812 17.229 1.00 0.00 ATOM 204 CD2 LEU 28 2.121 41.023 15.216 1.00 0.00 ATOM 205 C LEU 28 0.906 39.049 19.139 1.00 0.00 ATOM 206 O LEU 28 1.376 39.925 19.863 1.00 0.00 ATOM 207 N ARG 29 -0.362 38.633 19.224 1.00 0.00 ATOM 208 CA ARG 29 -1.399 39.237 20.046 1.00 0.00 ATOM 209 CB ARG 29 -1.284 38.877 21.539 1.00 0.00 ATOM 210 CG ARG 29 -2.391 39.376 22.487 1.00 0.00 ATOM 211 CD ARG 29 -3.826 39.342 21.943 1.00 0.00 ATOM 212 NE ARG 29 -4.318 38.022 21.577 1.00 0.00 ATOM 213 CZ ARG 29 -5.325 37.870 20.712 1.00 0.00 ATOM 214 NH1 ARG 29 -5.899 36.679 20.603 1.00 0.00 ATOM 215 NH2 ARG 29 -5.707 38.849 19.894 1.00 0.00 ATOM 216 C ARG 29 -1.618 40.713 19.739 1.00 0.00 ATOM 217 O ARG 29 -1.365 41.655 20.491 1.00 0.00 ATOM 218 N VAL 30 -2.101 40.829 18.509 1.00 0.00 ATOM 219 CA VAL 30 -2.712 42.058 18.035 1.00 0.00 ATOM 220 CB VAL 30 -2.106 42.503 16.676 1.00 0.00 ATOM 221 CG1 VAL 30 -0.747 43.141 16.906 1.00 0.00 ATOM 222 CG2 VAL 30 -1.972 41.357 15.677 1.00 0.00 ATOM 223 C VAL 30 -4.218 41.810 17.969 1.00 0.00 ATOM 224 O VAL 30 -4.746 41.028 18.768 1.00 0.00 ATOM 225 N THR 31 -4.972 42.465 17.085 1.00 0.00 ATOM 226 CA THR 31 -6.336 42.044 16.795 1.00 0.00 ATOM 227 CB THR 31 -7.134 43.182 16.132 1.00 0.00 ATOM 228 OG1 THR 31 -6.496 44.416 16.455 1.00 0.00 ATOM 229 CG2 THR 31 -8.576 43.191 16.609 1.00 0.00 ATOM 230 C THR 31 -6.248 40.870 15.823 1.00 0.00 ATOM 231 O THR 31 -5.255 40.723 15.105 1.00 0.00 ATOM 232 N GLU 32 -7.259 40.000 15.770 1.00 0.00 ATOM 233 CA GLU 32 -7.332 38.943 14.769 1.00 0.00 ATOM 234 CB GLU 32 -8.419 37.927 15.158 1.00 0.00 ATOM 235 CG GLU 32 -8.074 36.861 16.212 1.00 0.00 ATOM 236 CD GLU 32 -7.917 37.260 17.683 1.00 0.00 ATOM 237 OE1 GLU 32 -7.931 36.379 18.547 1.00 0.00 ATOM 238 OE2 GLU 32 -7.787 38.444 18.009 1.00 0.00 ATOM 239 C GLU 32 -7.573 39.505 13.365 1.00 0.00 ATOM 240 O GLU 32 -8.663 39.396 12.796 1.00 0.00 ATOM 241 N ARG 33 -6.558 40.170 12.805 1.00 0.00 ATOM 242 CA ARG 33 -6.647 40.788 11.493 1.00 0.00 ATOM 243 CB ARG 33 -6.751 42.319 11.574 1.00 0.00 ATOM 244 CG ARG 33 -7.883 42.915 12.399 1.00 0.00 ATOM 245 CD ARG 33 -9.257 42.572 11.845 1.00 0.00 ATOM 246 NE ARG 33 -10.293 43.047 12.746 1.00 0.00 ATOM 247 CZ ARG 33 -10.884 42.265 13.653 1.00 0.00 ATOM 248 NH1 ARG 33 -11.791 42.808 14.452 1.00 0.00 ATOM 249 NH2 ARG 33 -10.594 40.971 13.776 1.00 0.00 ATOM 250 C ARG 33 -5.380 40.448 10.717 1.00 0.00 ATOM 251 O ARG 33 -4.291 40.887 11.104 1.00 0.00 ATOM 252 N PRO 34 -5.459 39.696 9.606 1.00 0.00 ATOM 253 CD PRO 34 -6.692 39.122 9.078 1.00 0.00 ATOM 254 CA PRO 34 -4.319 39.349 8.756 1.00 0.00 ATOM 255 CB PRO 34 -4.966 38.596 7.608 1.00 0.00 ATOM 256 CG PRO 34 -6.398 39.073 7.593 1.00 0.00 ATOM 257 C PRO 34 -3.508 40.545 8.269 1.00 0.00 ATOM 258 O PRO 34 -2.291 40.457 8.104 1.00 0.00 ATOM 259 N PHE 35 -4.187 41.686 8.087 1.00 0.00 ATOM 260 CA PHE 35 -3.556 42.947 7.735 1.00 0.00 ATOM 261 CB PHE 35 -4.619 44.049 7.662 1.00 0.00 ATOM 262 CG PHE 35 -4.083 45.414 7.239 1.00 0.00 ATOM 263 CD1 PHE 35 -3.547 45.591 5.976 1.00 0.00 ATOM 264 CD2 PHE 35 -4.109 46.466 8.135 1.00 0.00 ATOM 265 CE1 PHE 35 -3.019 46.816 5.624 1.00 0.00 ATOM 266 CE2 PHE 35 -3.579 47.686 7.772 1.00 0.00 ATOM 267 CZ PHE 35 -3.032 47.862 6.520 1.00 0.00 ATOM 268 C PHE 35 -2.445 43.345 8.702 1.00 0.00 ATOM 269 O PHE 35 -1.388 43.792 8.254 1.00 0.00 ATOM 270 N TRP 36 -2.634 43.156 10.015 1.00 0.00 ATOM 271 CA TRP 36 -1.611 43.532 10.985 1.00 0.00 ATOM 272 CB TRP 36 -2.106 43.392 12.420 1.00 0.00 ATOM 273 CG TRP 36 -3.283 44.276 12.829 1.00 0.00 ATOM 274 CD2 TRP 36 -3.618 45.542 12.408 1.00 0.00 ATOM 275 CE2 TRP 36 -4.723 45.807 13.157 1.00 0.00 ATOM 276 CE3 TRP 36 -2.935 46.545 11.759 1.00 0.00 ATOM 277 CD1 TRP 36 -4.170 43.827 13.783 1.00 0.00 ATOM 278 NE1 TRP 36 -5.037 44.799 13.976 1.00 0.00 ATOM 279 CZ2 TRP 36 -5.253 47.063 13.316 1.00 0.00 ATOM 280 CZ3 TRP 36 -3.460 47.823 11.877 1.00 0.00 ATOM 281 CH2 TRP 36 -4.597 48.077 12.637 1.00 0.00 ATOM 282 C TRP 36 -0.352 42.702 10.800 1.00 0.00 ATOM 283 O TRP 36 0.764 43.221 10.809 1.00 0.00 ATOM 284 N ILE 37 -0.558 41.409 10.532 1.00 0.00 ATOM 285 CA ILE 37 0.530 40.497 10.226 1.00 0.00 ATOM 286 CB ILE 37 -0.008 39.045 10.169 1.00 0.00 ATOM 287 CG2 ILE 37 1.038 38.043 9.707 1.00 0.00 ATOM 288 CG1 ILE 37 -0.562 38.633 11.529 1.00 0.00 ATOM 289 CD1 ILE 37 0.452 38.747 12.692 1.00 0.00 ATOM 290 C ILE 37 1.222 40.949 8.946 1.00 0.00 ATOM 291 O ILE 37 2.422 41.209 8.976 1.00 0.00 ATOM 292 N SER 38 0.499 41.148 7.843 1.00 0.00 ATOM 293 CA SER 38 1.074 41.708 6.627 1.00 0.00 ATOM 294 CB SER 38 0.076 41.549 5.492 1.00 0.00 ATOM 295 OG SER 38 -0.086 40.172 5.186 1.00 0.00 ATOM 296 C SER 38 1.562 43.156 6.713 1.00 0.00 ATOM 297 O SER 38 2.114 43.676 5.742 1.00 0.00 ATOM 298 N SER 39 1.339 43.853 7.833 1.00 0.00 ATOM 299 CA SER 39 1.991 45.130 8.098 1.00 0.00 ATOM 300 CB SER 39 1.059 46.047 8.877 1.00 0.00 ATOM 301 OG SER 39 -0.150 46.279 8.167 1.00 0.00 ATOM 302 C SER 39 3.311 44.971 8.852 1.00 0.00 ATOM 303 O SER 39 4.116 45.902 8.917 1.00 0.00 ATOM 304 N PHE 40 3.538 43.818 9.488 1.00 0.00 ATOM 305 CA PHE 40 4.852 43.488 10.025 1.00 0.00 ATOM 306 CB PHE 40 4.737 42.638 11.292 1.00 0.00 ATOM 307 CG PHE 40 4.440 43.433 12.553 1.00 0.00 ATOM 308 CD1 PHE 40 3.177 43.944 12.782 1.00 0.00 ATOM 309 CD2 PHE 40 5.446 43.630 13.479 1.00 0.00 ATOM 310 CE1 PHE 40 2.924 44.651 13.941 1.00 0.00 ATOM 311 CE2 PHE 40 5.184 44.336 14.635 1.00 0.00 ATOM 312 CZ PHE 40 3.925 44.846 14.866 1.00 0.00 ATOM 313 C PHE 40 5.660 42.744 8.973 1.00 0.00 ATOM 314 O PHE 40 6.711 43.202 8.519 1.00 0.00 ATOM 315 N ILE 41 5.129 41.590 8.559 1.00 0.00 ATOM 316 CA ILE 41 5.737 40.750 7.539 1.00 0.00 ATOM 317 CB ILE 41 4.949 39.435 7.337 1.00 0.00 ATOM 318 CG2 ILE 41 5.791 38.502 6.486 1.00 0.00 ATOM 319 CG1 ILE 41 4.516 38.723 8.621 1.00 0.00 ATOM 320 CD1 ILE 41 5.602 38.206 9.582 1.00 0.00 ATOM 321 C ILE 41 5.726 41.557 6.247 1.00 0.00 ATOM 322 O ILE 41 4.692 42.061 5.799 1.00 0.00 ATOM 323 N GLY 42 6.915 41.705 5.681 1.00 0.00 ATOM 324 CA GLY 42 7.147 42.593 4.562 1.00 0.00 ATOM 325 C GLY 42 8.230 43.597 4.917 1.00 0.00 ATOM 326 O GLY 42 9.154 43.820 4.133 1.00 0.00 ATOM 327 N ARG 43 8.174 44.170 6.125 1.00 0.00 ATOM 328 CA ARG 43 9.045 45.287 6.448 1.00 0.00 ATOM 329 CB ARG 43 8.301 46.471 7.098 1.00 0.00 ATOM 330 CG ARG 43 6.836 46.733 6.765 1.00 0.00 ATOM 331 CD ARG 43 6.560 46.928 5.277 1.00 0.00 ATOM 332 NE ARG 43 5.133 46.935 4.981 1.00 0.00 ATOM 333 CZ ARG 43 4.357 45.849 5.075 1.00 0.00 ATOM 334 NH1 ARG 43 3.083 45.927 4.732 1.00 0.00 ATOM 335 NH2 ARG 43 4.803 44.692 5.551 1.00 0.00 ATOM 336 C ARG 43 10.114 44.805 7.418 1.00 0.00 ATOM 337 O ARG 43 9.875 44.729 8.625 1.00 0.00 ATOM 338 N SER 44 11.312 44.455 6.942 1.00 0.00 ATOM 339 CA SER 44 12.417 44.151 7.840 1.00 0.00 ATOM 340 CB SER 44 13.507 43.396 7.085 1.00 0.00 ATOM 341 OG SER 44 13.900 44.077 5.896 1.00 0.00 ATOM 342 C SER 44 12.947 45.434 8.474 1.00 0.00 ATOM 343 O SER 44 13.928 46.026 8.016 1.00 0.00 ATOM 344 N LYS 45 12.240 45.870 9.519 1.00 0.00 ATOM 345 CA LYS 45 12.457 47.168 10.146 1.00 0.00 ATOM 346 CB LYS 45 11.325 47.469 11.127 1.00 0.00 ATOM 347 CG LYS 45 9.949 47.582 10.492 1.00 0.00 ATOM 348 CD LYS 45 8.881 47.687 11.566 1.00 0.00 ATOM 349 CE LYS 45 7.511 47.601 10.914 1.00 0.00 ATOM 350 NZ LYS 45 6.459 47.581 11.909 1.00 0.00 ATOM 351 C LYS 45 13.789 47.360 10.860 1.00 0.00 ATOM 352 O LYS 45 14.600 48.208 10.484 1.00 0.00 TER END