####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS160_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS160_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 25 2 - 26 4.94 10.73 LCS_AVERAGE: 50.00 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 36 - 43 1.79 17.42 LCS_AVERAGE: 13.27 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 23 - 29 0.56 21.09 LCS_AVERAGE: 9.87 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 25 3 3 3 3 5 6 12 13 15 16 21 26 29 32 34 35 37 38 39 39 LCS_GDT V 3 V 3 4 5 25 3 3 4 5 5 7 7 10 12 17 20 26 29 32 34 35 37 38 39 39 LCS_GDT Q 4 Q 4 4 5 25 3 3 4 5 6 8 12 13 14 17 20 26 29 32 34 35 37 38 39 39 LCS_GDT G 5 G 5 4 5 25 3 3 4 6 6 9 12 13 14 17 20 26 29 32 34 35 37 38 39 39 LCS_GDT P 6 P 6 4 5 25 3 3 4 5 5 5 8 10 11 13 16 20 21 24 29 34 37 38 39 39 LCS_GDT W 7 W 7 3 5 25 3 3 4 6 6 9 12 13 14 16 19 23 26 32 34 35 37 38 39 39 LCS_GDT V 8 V 8 3 4 25 3 3 5 6 6 8 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT G 9 G 9 3 4 25 3 3 4 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT S 10 S 10 3 4 25 3 3 4 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT S 11 S 11 3 4 25 2 4 4 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT Y 12 Y 12 3 4 25 3 3 4 6 6 8 9 11 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT V 13 V 13 5 5 25 4 5 5 5 5 5 5 9 11 14 21 26 29 32 34 35 37 38 39 39 LCS_GDT A 14 A 14 5 5 25 4 5 5 5 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT E 15 E 15 5 5 25 4 5 5 5 5 5 6 10 11 12 16 18 21 23 32 35 37 38 39 39 LCS_GDT T 16 T 16 5 5 25 4 5 5 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT G 17 G 17 5 5 25 3 5 5 5 6 8 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT Q 18 Q 18 4 4 25 3 4 4 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT N 19 N 19 4 4 25 3 3 4 4 7 7 9 10 15 16 19 24 28 32 34 35 37 38 39 39 LCS_GDT W 20 W 20 4 5 25 3 4 5 6 6 8 9 10 12 14 18 19 23 27 32 35 37 38 39 39 LCS_GDT A 21 A 21 4 5 25 3 4 5 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT S 22 S 22 4 5 25 3 4 5 6 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT L 23 L 23 7 7 25 3 7 7 7 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT A 24 A 24 7 7 25 5 7 7 7 7 7 7 9 11 14 18 20 26 32 34 35 37 38 39 39 LCS_GDT A 25 A 25 7 7 25 5 7 7 7 7 7 9 13 14 17 20 26 29 32 34 35 37 38 39 39 LCS_GDT N 26 N 26 7 7 25 5 7 7 7 7 8 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT E 27 E 27 7 7 20 5 7 7 7 7 8 10 12 14 17 19 25 29 32 34 35 37 38 39 39 LCS_GDT L 28 L 28 7 7 20 5 7 7 7 7 8 8 9 14 15 18 21 23 29 33 35 37 38 39 39 LCS_GDT R 29 R 29 7 7 20 5 7 7 7 7 8 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT V 30 V 30 3 6 20 3 3 4 6 7 8 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT T 31 T 31 3 6 20 3 3 4 6 7 7 9 11 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT E 32 E 32 3 6 20 3 4 4 5 6 8 12 13 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT R 33 R 33 3 6 20 3 3 4 4 5 7 9 11 14 16 19 25 29 32 34 35 37 38 39 39 LCS_GDT P 34 P 34 3 6 20 3 3 4 5 5 8 10 12 14 17 19 24 29 32 34 35 37 38 39 39 LCS_GDT F 35 F 35 3 6 20 3 3 4 5 5 7 10 12 14 17 19 24 29 32 34 35 37 38 39 39 LCS_GDT W 36 W 36 5 8 20 4 4 5 6 7 8 10 12 15 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT I 37 I 37 5 8 19 4 4 5 6 7 8 9 11 14 17 20 26 29 32 34 35 37 38 39 39 LCS_GDT S 38 S 38 5 8 16 4 4 5 6 7 8 9 11 14 16 20 26 29 32 34 35 37 38 39 39 LCS_GDT S 39 S 39 5 8 16 4 4 5 6 7 8 9 11 14 17 21 26 29 32 34 35 37 38 39 39 LCS_GDT F 40 F 40 5 8 16 4 4 5 6 7 8 9 11 11 12 16 19 24 28 33 35 37 38 39 39 LCS_GDT I 41 I 41 5 8 16 4 4 5 6 7 8 9 9 11 12 14 19 22 27 30 32 35 37 38 39 LCS_GDT G 42 G 42 3 8 15 3 3 3 4 7 8 9 9 11 12 14 19 22 27 30 31 34 37 38 39 LCS_GDT R 43 R 43 3 8 15 3 3 4 5 7 8 9 9 10 12 12 14 14 15 16 21 25 27 32 34 LCS_GDT S 44 S 44 3 6 15 3 3 3 4 5 8 9 9 10 12 12 14 14 14 15 16 16 18 19 20 LCS_GDT K 45 K 45 3 5 15 3 3 3 3 5 5 6 9 10 10 12 13 14 14 15 16 16 16 17 17 LCS_AVERAGE LCS_A: 24.38 ( 9.87 13.27 50.00 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 7 7 7 7 9 12 13 15 17 21 26 29 32 34 35 37 38 39 39 GDT PERCENT_AT 11.36 15.91 15.91 15.91 15.91 20.45 27.27 29.55 34.09 38.64 47.73 59.09 65.91 72.73 77.27 79.55 84.09 86.36 88.64 88.64 GDT RMS_LOCAL 0.28 0.56 0.56 0.56 0.56 2.11 2.59 2.93 3.32 3.74 4.14 4.66 4.92 5.20 5.36 5.49 5.70 5.82 5.95 5.95 GDT RMS_ALL_AT 20.91 21.09 21.09 21.09 21.09 11.73 12.42 8.82 9.30 8.89 8.81 8.98 9.08 9.14 9.15 9.23 9.30 9.27 9.14 9.14 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.243 0 0.596 0.581 11.860 0.000 0.000 - LGA V 3 V 3 6.017 0 0.590 0.583 9.246 14.091 8.052 7.483 LGA Q 4 Q 4 3.254 0 0.113 0.885 11.378 16.818 7.475 11.102 LGA G 5 G 5 3.140 0 0.564 0.564 4.251 11.818 11.818 - LGA P 6 P 6 5.976 0 0.460 0.653 10.221 2.727 1.558 10.221 LGA W 7 W 7 2.963 0 0.540 1.144 7.324 14.091 6.494 7.324 LGA V 8 V 8 5.504 0 0.268 0.964 9.010 3.182 1.818 8.898 LGA G 9 G 9 1.376 0 0.498 0.498 3.174 40.000 40.000 - LGA S 10 S 10 2.270 0 0.575 0.659 4.840 24.091 24.242 3.873 LGA S 11 S 11 3.454 0 0.664 0.765 3.861 21.364 19.091 3.202 LGA Y 12 Y 12 5.367 0 0.683 1.483 7.812 0.000 0.606 5.443 LGA V 13 V 13 6.547 0 0.086 0.119 10.386 0.455 0.260 9.118 LGA A 14 A 14 2.975 0 0.143 0.142 5.140 15.000 12.000 - LGA E 15 E 15 6.072 0 0.034 1.201 12.746 4.091 1.818 10.298 LGA T 16 T 16 1.630 0 0.129 1.174 6.373 33.636 21.558 6.373 LGA G 17 G 17 4.511 0 0.232 0.232 6.126 8.636 8.636 - LGA Q 18 Q 18 1.756 0 0.616 1.465 5.291 35.909 23.434 4.556 LGA N 19 N 19 7.333 0 0.053 1.031 11.331 0.000 0.000 9.320 LGA W 20 W 20 8.131 0 0.559 1.067 19.398 0.455 0.130 19.398 LGA A 21 A 21 2.839 0 0.088 0.084 4.808 29.545 24.727 - LGA S 22 S 22 2.921 0 0.281 0.274 5.073 34.545 23.333 5.073 LGA L 23 L 23 2.411 0 0.638 0.535 8.328 25.455 13.182 8.328 LGA A 24 A 24 7.423 0 0.050 0.052 9.408 0.000 0.000 - LGA A 25 A 25 4.629 0 0.031 0.032 7.274 0.909 4.364 - LGA N 26 N 26 7.699 0 0.038 1.270 11.624 0.000 0.000 9.819 LGA E 27 E 27 11.715 0 0.107 1.287 15.226 0.000 0.000 14.826 LGA L 28 L 28 13.201 0 0.245 0.259 16.223 0.000 0.000 13.083 LGA R 29 R 29 12.727 0 0.358 1.284 14.086 0.000 0.000 12.434 LGA V 30 V 30 11.714 0 0.612 0.599 13.669 0.000 0.000 11.230 LGA T 31 T 31 14.901 0 0.124 0.147 16.904 0.000 0.000 15.126 LGA E 32 E 32 12.061 0 0.628 1.367 12.729 0.000 0.000 10.927 LGA R 33 R 33 13.178 0 0.276 1.107 16.125 0.000 0.000 13.468 LGA P 34 P 34 14.131 0 0.629 0.889 15.584 0.000 0.000 13.005 LGA F 35 F 35 12.405 0 0.630 0.917 15.350 0.000 0.000 15.350 LGA W 36 W 36 8.683 0 0.610 1.311 12.837 0.000 0.000 11.325 LGA I 37 I 37 10.921 0 0.105 1.037 12.906 0.000 0.000 12.742 LGA S 38 S 38 10.980 0 0.123 0.134 13.362 0.000 0.000 8.764 LGA S 39 S 39 13.349 0 0.156 0.213 16.401 0.000 0.000 13.008 LGA F 40 F 40 15.232 0 0.103 1.752 18.371 0.000 0.000 17.552 LGA I 41 I 41 17.351 0 0.626 0.973 20.443 0.000 0.000 15.592 LGA G 42 G 42 19.577 0 0.637 0.637 21.406 0.000 0.000 - LGA R 43 R 43 24.488 0 0.483 1.102 27.363 0.000 0.000 27.363 LGA S 44 S 44 29.408 0 0.110 0.679 31.072 0.000 0.000 29.288 LGA K 45 K 45 34.688 0 0.111 0.668 40.512 0.000 0.000 40.512 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.455 8.434 9.961 7.655 5.786 0.883 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 13 2.86 35.227 28.867 0.439 LGA_LOCAL RMSD: 2.864 Number of atoms: 13 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.928 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.455 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.238360 * X + 0.949383 * Y + -0.204591 * Z + -45.680481 Y_new = 0.772303 * X + 0.313024 * Y + 0.552779 * Z + -33.651390 Z_new = 0.588840 * X + -0.026246 * Y + -0.807823 * Z + -3.334478 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.870157 -0.629623 -3.109115 [DEG: 107.1521 -36.0747 -178.1392 ] ZXZ: -2.787113 2.511246 1.615338 [DEG: -159.6898 143.8838 92.5521 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS160_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS160_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 13 2.86 28.867 8.45 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS160_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 1vt4_I ATOM 11 N ALA 2 8.940 44.167 6.363 1.00 23.55 ATOM 12 CA ALA 2 10.000 43.299 5.988 1.00 23.55 ATOM 13 C ALA 2 9.951 42.129 7.008 1.00 23.55 ATOM 14 O ALA 2 10.114 40.971 6.628 1.00 23.55 ATOM 15 CB ALA 2 11.367 43.973 6.024 1.00 23.55 ATOM 17 N VAL 3 9.702 42.540 8.351 1.00 21.29 ATOM 18 CA VAL 3 10.537 41.870 9.422 1.00 21.29 ATOM 19 C VAL 3 10.121 40.381 9.293 1.00 21.29 ATOM 20 O VAL 3 10.972 39.496 9.348 1.00 21.29 ATOM 21 CB VAL 3 10.282 42.370 10.861 1.00 21.29 ATOM 22 CG1 VAL 3 11.075 41.536 11.866 1.00 21.29 ATOM 23 CG2 VAL 3 10.709 43.831 11.000 1.00 21.29 ATOM 25 N GLN 4 8.810 40.250 9.124 1.00 19.35 ATOM 26 CA GLN 4 8.015 39.143 9.341 1.00 19.35 ATOM 27 C GLN 4 7.790 38.715 8.000 1.00 19.35 ATOM 28 O GLN 4 7.354 39.505 7.167 1.00 19.35 ATOM 29 CB GLN 4 6.679 39.410 10.038 1.00 19.35 ATOM 30 CG GLN 4 5.937 38.110 10.351 1.00 19.35 ATOM 31 CD GLN 4 4.595 38.392 11.017 1.00 19.35 ATOM 32 NE2 GLN 4 3.590 37.589 10.739 1.00 19.35 ATOM 33 OE1 GLN 4 4.458 39.334 11.784 1.00 19.35 ATOM 35 N GLY 5 8.078 37.484 7.805 1.00 17.70 ATOM 36 CA GLY 5 8.379 36.932 6.428 1.00 17.70 ATOM 37 C GLY 5 7.187 37.219 5.647 1.00 17.70 ATOM 38 O GLY 5 7.289 37.673 4.509 1.00 17.70 ATOM 39 N PRO 6 5.926 37.036 6.065 1.00 15.26 ATOM 40 CA PRO 6 5.070 36.077 5.476 1.00 15.26 ATOM 41 C PRO 6 4.642 36.492 4.131 1.00 15.26 ATOM 42 O PRO 6 3.520 36.961 3.960 1.00 15.26 ATOM 43 CB PRO 6 3.881 36.000 6.435 1.00 15.26 ATOM 44 CG PRO 6 4.457 36.257 7.810 1.00 15.26 ATOM 45 CD PRO 6 5.746 35.456 7.891 1.00 15.26 ATOM 47 N TRP 7 5.614 36.295 3.112 1.00 14.24 ATOM 48 CA TRP 7 5.228 36.603 1.660 1.00 14.24 ATOM 49 C TRP 7 4.000 36.041 1.162 1.00 14.24 ATOM 50 O TRP 7 2.921 36.539 1.475 1.00 14.24 ATOM 51 CB TRP 7 6.403 36.154 0.785 1.00 14.24 ATOM 52 CG TRP 7 7.602 37.044 0.954 1.00 14.24 ATOM 53 CD1 TRP 7 7.683 38.125 1.769 1.00 14.24 ATOM 54 CD2 TRP 7 8.878 36.931 0.303 1.00 14.24 ATOM 55 NE1 TRP 7 8.933 38.687 1.659 1.00 14.24 ATOM 56 CE2 TRP 7 9.700 37.977 0.762 1.00 14.24 ATOM 57 CE3 TRP 7 9.394 36.029 -0.636 1.00 14.24 ATOM 58 CZ2 TRP 7 11.007 38.138 0.311 1.00 14.24 ATOM 59 CZ3 TRP 7 10.704 36.190 -1.088 1.00 14.24 ATOM 60 CH2 TRP 7 11.504 37.236 -0.619 1.00 14.24 ATOM 62 N VAL 8 3.993 34.920 0.321 1.00 12.50 ATOM 63 CA VAL 8 2.632 34.358 0.036 1.00 12.50 ATOM 64 C VAL 8 2.465 33.276 1.011 1.00 12.50 ATOM 65 O VAL 8 1.637 32.389 0.811 1.00 12.50 ATOM 66 CB VAL 8 2.464 33.810 -1.398 1.00 12.50 ATOM 67 CG1 VAL 8 3.404 32.627 -1.633 1.00 12.50 ATOM 68 CG2 VAL 8 1.028 33.340 -1.625 1.00 12.50 ATOM 70 N GLY 9 3.195 33.293 2.062 1.00 17.04 ATOM 71 CA GLY 9 3.162 32.404 3.170 1.00 17.04 ATOM 72 C GLY 9 3.627 31.032 2.922 1.00 17.04 ATOM 73 O GLY 9 2.983 30.077 3.348 1.00 17.04 ATOM 75 N SER 10 4.706 30.782 2.267 1.00 14.93 ATOM 76 CA SER 10 5.496 29.689 2.860 1.00 14.93 ATOM 77 C SER 10 6.782 29.965 3.423 1.00 14.93 ATOM 78 O SER 10 7.744 30.181 2.688 1.00 14.93 ATOM 79 CB SER 10 5.625 28.632 1.761 1.00 14.93 ATOM 80 OG SER 10 4.347 28.102 1.443 1.00 14.93 ATOM 82 N SER 11 6.869 29.966 4.715 1.00 16.49 ATOM 83 CA SER 11 7.985 29.516 5.399 1.00 16.49 ATOM 84 C SER 11 7.478 29.420 6.734 1.00 16.49 ATOM 85 O SER 11 6.660 30.240 7.144 1.00 16.49 ATOM 86 CB SER 11 9.193 30.455 5.368 1.00 16.49 ATOM 87 OG SER 11 8.898 31.650 6.076 1.00 16.49 ATOM 89 N TYR 12 7.885 28.404 7.634 1.00 12.03 ATOM 90 CA TYR 12 7.409 28.464 8.933 1.00 12.03 ATOM 91 C TYR 12 8.639 28.061 9.757 1.00 12.03 ATOM 92 O TYR 12 9.542 27.410 9.238 1.00 12.03 ATOM 93 CB TYR 12 6.246 27.512 9.234 1.00 12.03 ATOM 94 CG TYR 12 5.068 27.738 8.309 1.00 12.03 ATOM 95 CD1 TYR 12 4.987 27.068 7.087 1.00 12.03 ATOM 96 CD2 TYR 12 4.049 28.621 8.671 1.00 12.03 ATOM 97 CE1 TYR 12 3.900 27.277 6.237 1.00 12.03 ATOM 98 CE2 TYR 12 2.962 28.832 7.821 1.00 12.03 ATOM 99 CZ TYR 12 2.891 28.159 6.607 1.00 12.03 ATOM 100 OH TYR 12 1.821 28.366 5.770 1.00 12.03 ATOM 102 N VAL 13 8.756 28.374 10.963 1.00 13.84 ATOM 103 CA VAL 13 9.242 27.509 11.990 1.00 13.84 ATOM 104 C VAL 13 8.374 26.341 12.480 1.00 13.84 ATOM 105 O VAL 13 8.879 25.238 12.678 1.00 13.84 ATOM 106 CB VAL 13 9.613 28.428 13.176 1.00 13.84 ATOM 107 CG1 VAL 13 10.006 27.596 14.395 1.00 13.84 ATOM 108 CG2 VAL 13 10.792 29.326 12.803 1.00 13.84 ATOM 110 N ALA 14 7.066 26.607 12.660 1.00 21.49 ATOM 111 CA ALA 14 5.861 25.855 12.129 1.00 21.49 ATOM 112 C ALA 14 4.761 26.222 13.107 1.00 21.49 ATOM 113 O ALA 14 3.777 26.849 12.721 1.00 21.49 ATOM 114 CB ALA 14 6.043 24.343 12.082 1.00 21.49 ATOM 116 N GLU 15 5.002 25.798 14.388 1.00 23.13 ATOM 117 CA GLU 15 3.905 26.135 15.312 1.00 23.13 ATOM 118 C GLU 15 3.805 27.686 15.382 1.00 23.13 ATOM 119 O GLU 15 2.706 28.231 15.437 1.00 23.13 ATOM 120 CB GLU 15 4.131 25.559 16.713 1.00 23.13 ATOM 121 CG GLU 15 3.992 24.036 16.721 1.00 23.13 ATOM 122 CD GLU 15 4.312 23.465 18.099 1.00 23.13 ATOM 123 OE1 GLU 15 4.130 22.260 18.285 1.00 23.13 ATOM 124 OE2 GLU 15 4.738 24.243 18.960 1.00 23.13 ATOM 126 N THR 16 5.048 28.344 15.368 1.00 21.59 ATOM 127 CA THR 16 5.038 29.828 15.362 1.00 21.59 ATOM 128 C THR 16 4.352 30.473 14.173 1.00 21.59 ATOM 129 O THR 16 3.624 31.450 14.336 1.00 21.59 ATOM 130 CB THR 16 6.493 30.325 15.454 1.00 21.59 ATOM 131 OG1 THR 16 7.066 29.869 16.672 1.00 21.59 ATOM 132 CG2 THR 16 6.564 31.850 15.421 1.00 21.59 ATOM 134 N GLY 17 4.591 29.915 13.018 1.00 18.79 ATOM 135 CA GLY 17 3.944 30.433 11.815 1.00 18.79 ATOM 136 C GLY 17 2.484 30.393 11.921 1.00 18.79 ATOM 137 O GLY 17 1.810 31.330 11.501 1.00 18.79 ATOM 139 N GLN 18 2.071 29.257 12.509 1.00 13.47 ATOM 140 CA GLN 18 0.690 29.017 12.576 1.00 13.47 ATOM 141 C GLN 18 -0.065 30.022 13.344 1.00 13.47 ATOM 142 O GLN 18 -1.142 30.436 12.923 1.00 13.47 ATOM 143 CB GLN 18 0.467 27.624 13.170 1.00 13.47 ATOM 144 CG GLN 18 -1.013 27.241 13.163 1.00 13.47 ATOM 145 CD GLN 18 -1.550 27.149 11.739 1.00 13.47 ATOM 146 NE2 GLN 18 -2.600 27.878 11.428 1.00 13.47 ATOM 147 OE1 GLN 18 -1.019 26.420 10.912 1.00 13.47 ATOM 149 N ASN 19 0.563 30.377 14.467 1.00 14.39 ATOM 150 CA ASN 19 -0.017 31.361 15.282 1.00 14.39 ATOM 151 C ASN 19 -0.161 32.755 14.683 1.00 14.39 ATOM 152 O ASN 19 -1.190 33.401 14.869 1.00 14.39 ATOM 153 CB ASN 19 0.801 31.425 16.576 1.00 14.39 ATOM 154 CG ASN 19 0.559 30.196 17.445 1.00 14.39 ATOM 155 ND2 ASN 19 1.545 29.785 18.214 1.00 14.39 ATOM 156 OD1 ASN 19 -0.518 29.615 17.428 1.00 14.39 ATOM 158 N TRP 20 0.941 33.182 13.937 1.00 18.70 ATOM 159 CA TRP 20 0.985 34.492 13.301 1.00 18.70 ATOM 160 C TRP 20 -0.215 34.483 12.398 1.00 18.70 ATOM 161 O TRP 20 -1.057 35.374 12.483 1.00 18.70 ATOM 162 CB TRP 20 2.254 34.756 12.486 1.00 18.70 ATOM 163 CG TRP 20 3.470 34.872 13.360 1.00 18.70 ATOM 164 CD1 TRP 20 3.471 35.036 14.707 1.00 18.70 ATOM 165 CD2 TRP 20 4.849 34.833 12.956 1.00 18.70 ATOM 166 NE1 TRP 20 4.769 35.102 15.158 1.00 18.70 ATOM 167 CE2 TRP 20 5.648 34.979 14.105 1.00 18.70 ATOM 168 CE3 TRP 20 5.476 34.686 11.713 1.00 18.70 ATOM 169 CZ2 TRP 20 7.039 34.982 14.038 1.00 18.70 ATOM 170 CZ3 TRP 20 6.868 34.688 11.645 1.00 18.70 ATOM 171 CH2 TRP 20 7.644 34.836 12.798 1.00 18.70 ATOM 173 N ALA 21 -0.273 33.423 11.514 1.00 15.20 ATOM 174 CA ALA 21 -1.094 33.393 10.284 1.00 15.20 ATOM 175 C ALA 21 -2.565 33.544 10.724 1.00 15.20 ATOM 176 O ALA 21 -3.297 34.354 10.162 1.00 15.20 ATOM 177 CB ALA 21 -0.908 32.103 9.496 1.00 15.20 ATOM 179 N SER 22 -2.956 32.786 11.699 1.00 16.31 ATOM 180 CA SER 22 -4.436 32.617 12.011 1.00 16.31 ATOM 181 C SER 22 -4.971 33.017 13.413 1.00 16.31 ATOM 182 O SER 22 -6.117 32.721 13.742 1.00 16.31 ATOM 183 CB SER 22 -4.752 31.146 11.733 1.00 16.31 ATOM 184 OG SER 22 -3.983 30.313 12.587 1.00 16.31 ATOM 186 N LEU 23 -4.153 33.678 14.203 1.00 17.74 ATOM 187 CA LEU 23 -4.849 34.708 14.997 1.00 17.74 ATOM 188 C LEU 23 -5.482 35.685 14.156 1.00 17.74 ATOM 189 O LEU 23 -5.097 35.844 12.999 1.00 17.74 ATOM 190 CB LEU 23 -3.859 35.394 15.944 1.00 17.74 ATOM 191 CG LEU 23 -3.298 34.442 17.008 1.00 17.74 ATOM 192 CD1 LEU 23 -2.214 35.145 17.823 1.00 17.74 ATOM 193 CD2 LEU 23 -4.411 33.995 17.955 1.00 17.74 ATOM 195 N ALA 24 -6.449 36.379 14.659 1.00 16.33 ATOM 196 CA ALA 24 -7.158 37.490 14.015 1.00 16.33 ATOM 197 C ALA 24 -6.343 38.537 13.409 1.00 16.33 ATOM 198 O ALA 24 -6.631 38.976 12.299 1.00 16.33 ATOM 199 CB ALA 24 -8.089 38.085 15.063 1.00 16.33 ATOM 201 N ALA 25 -5.240 39.051 14.056 1.00 15.86 ATOM 202 CA ALA 25 -4.684 40.318 13.388 1.00 15.86 ATOM 203 C ALA 25 -4.226 39.967 12.016 1.00 15.86 ATOM 204 O ALA 25 -4.499 40.701 11.070 1.00 15.86 ATOM 205 CB ALA 25 -3.533 40.912 14.192 1.00 15.86 ATOM 207 N ASN 26 -3.497 38.749 12.018 1.00 15.75 ATOM 208 CA ASN 26 -2.763 38.414 10.840 1.00 15.75 ATOM 209 C ASN 26 -3.615 38.107 9.707 1.00 15.75 ATOM 210 O ASN 26 -3.324 38.521 8.587 1.00 15.75 ATOM 211 CB ASN 26 -1.834 37.232 11.136 1.00 15.75 ATOM 212 CG ASN 26 -0.916 36.943 9.953 1.00 15.75 ATOM 213 ND2 ASN 26 0.349 37.299 10.058 1.00 15.75 ATOM 214 OD1 ASN 26 -1.340 36.399 8.944 1.00 15.75 ATOM 216 N GLU 27 -4.705 37.368 9.994 1.00 14.15 ATOM 217 CA GLU 27 -5.579 37.002 8.904 1.00 14.15 ATOM 218 C GLU 27 -6.110 38.304 8.271 1.00 14.15 ATOM 219 O GLU 27 -6.137 38.429 7.048 1.00 14.15 ATOM 220 CB GLU 27 -6.747 36.129 9.368 1.00 14.15 ATOM 221 CG GLU 27 -7.616 35.683 8.191 1.00 14.15 ATOM 222 CD GLU 27 -8.745 34.772 8.660 1.00 14.15 ATOM 223 OE1 GLU 27 -9.548 34.360 7.818 1.00 14.15 ATOM 224 OE2 GLU 27 -8.802 34.494 9.863 1.00 14.15 ATOM 226 N LEU 28 -6.523 39.276 9.084 1.00 14.84 ATOM 227 CA LEU 28 -7.137 40.536 8.665 1.00 14.84 ATOM 228 C LEU 28 -6.091 41.502 7.949 1.00 14.84 ATOM 229 O LEU 28 -6.417 42.124 6.940 1.00 14.84 ATOM 230 CB LEU 28 -7.753 41.238 9.878 1.00 14.84 ATOM 231 CG LEU 28 -8.958 40.483 10.453 1.00 14.84 ATOM 232 CD1 LEU 28 -9.439 41.157 11.735 1.00 14.84 ATOM 233 CD2 LEU 28 -10.105 40.473 9.443 1.00 14.84 ATOM 235 N ARG 29 -4.816 41.541 8.583 1.00 16.13 ATOM 236 CA ARG 29 -3.794 42.366 8.065 1.00 16.13 ATOM 237 C ARG 29 -3.484 41.762 6.603 1.00 16.13 ATOM 238 O ARG 29 -3.258 42.516 5.660 1.00 16.13 ATOM 239 CB ARG 29 -2.520 42.370 8.913 1.00 16.13 ATOM 240 CG ARG 29 -2.742 43.055 10.261 1.00 16.13 ATOM 241 CD ARG 29 -1.455 43.059 11.084 1.00 16.13 ATOM 242 NE ARG 29 -0.421 43.856 10.392 1.00 16.13 ATOM 243 CZ ARG 29 0.438 43.316 9.546 1.00 16.13 ATOM 244 NH1 ARG 29 1.345 44.064 8.950 1.00 16.13 ATOM 245 NH2 ARG 29 0.387 42.025 9.298 1.00 16.13 ATOM 247 N VAL 30 -3.525 40.355 6.620 1.00 14.46 ATOM 248 CA VAL 30 -3.258 39.721 5.347 1.00 14.46 ATOM 249 C VAL 30 -4.250 40.092 4.318 1.00 14.46 ATOM 250 O VAL 30 -3.878 40.432 3.197 1.00 14.46 ATOM 251 CB VAL 30 -3.217 38.186 5.517 1.00 14.46 ATOM 252 CG1 VAL 30 -3.144 37.499 4.154 1.00 14.46 ATOM 253 CG2 VAL 30 -1.992 37.774 6.333 1.00 14.46 ATOM 255 N THR 31 -5.520 40.086 4.531 1.00 13.69 ATOM 256 CA THR 31 -6.484 40.380 3.570 1.00 13.69 ATOM 257 C THR 31 -6.500 41.754 2.976 1.00 13.69 ATOM 258 O THR 31 -6.746 41.906 1.781 1.00 13.69 ATOM 259 CB THR 31 -7.853 40.075 4.207 1.00 13.69 ATOM 260 OG1 THR 31 -8.008 40.864 5.379 1.00 13.69 ATOM 261 CG2 THR 31 -7.973 38.601 4.589 1.00 13.69 ATOM 263 N GLU 32 -6.251 42.845 3.689 1.00 15.51 ATOM 264 CA GLU 32 -6.358 44.187 3.370 1.00 15.51 ATOM 265 C GLU 32 -5.135 44.715 2.635 1.00 15.51 ATOM 266 O GLU 32 -5.066 45.903 2.326 1.00 15.51 ATOM 267 CB GLU 32 -6.596 44.998 4.647 1.00 15.51 ATOM 268 CG GLU 32 -7.959 44.685 5.265 1.00 15.51 ATOM 269 CD GLU 32 -8.189 45.510 6.527 1.00 15.51 ATOM 270 OE1 GLU 32 -9.272 45.391 7.109 1.00 15.51 ATOM 271 OE2 GLU 32 -7.279 46.257 6.902 1.00 15.51 ATOM 273 N ARG 33 -4.212 43.923 2.348 1.00 15.38 ATOM 274 CA ARG 33 -2.801 44.188 1.929 1.00 15.38 ATOM 275 C ARG 33 -2.360 43.994 0.417 1.00 15.38 ATOM 276 O ARG 33 -1.867 42.929 0.052 1.00 15.38 ATOM 277 CB ARG 33 -1.943 43.310 2.843 1.00 15.38 ATOM 278 CG ARG 33 -1.950 43.820 4.284 1.00 15.38 ATOM 279 CD ARG 33 -1.169 45.128 4.400 1.00 15.38 ATOM 280 NE ARG 33 -1.310 45.676 5.765 1.00 15.38 ATOM 281 CZ ARG 33 -0.577 45.246 6.777 1.00 15.38 ATOM 282 NH1 ARG 33 -0.734 45.762 7.980 1.00 15.38 ATOM 283 NH2 ARG 33 0.315 44.299 6.582 1.00 15.38 ATOM 284 N PRO 34 -2.589 45.063 -0.288 1.00 16.10 ATOM 285 CA PRO 34 -1.898 45.301 -1.487 1.00 16.10 ATOM 286 C PRO 34 -0.365 45.346 -1.262 1.00 16.10 ATOM 287 O PRO 34 0.402 45.054 -2.177 1.00 16.10 ATOM 288 CB PRO 34 -2.428 46.656 -1.956 1.00 16.10 ATOM 289 CG PRO 34 -3.854 46.726 -1.453 1.00 16.10 ATOM 290 CD PRO 34 -4.417 45.320 -1.567 1.00 16.10 ATOM 292 N PHE 35 0.209 45.715 -0.012 1.00 17.46 ATOM 293 CA PHE 35 1.582 45.473 0.065 1.00 17.46 ATOM 294 C PHE 35 1.967 44.076 -0.181 1.00 17.46 ATOM 295 O PHE 35 3.030 43.817 -0.741 1.00 17.46 ATOM 296 CB PHE 35 2.079 45.919 1.443 1.00 17.46 ATOM 297 CG PHE 35 3.520 45.529 1.681 1.00 17.46 ATOM 298 CD1 PHE 35 4.553 46.380 1.296 1.00 17.46 ATOM 299 CD2 PHE 35 3.825 44.313 2.289 1.00 17.46 ATOM 300 CE1 PHE 35 5.881 46.018 1.516 1.00 17.46 ATOM 301 CE2 PHE 35 5.154 43.950 2.509 1.00 17.46 ATOM 302 CZ PHE 35 6.180 44.804 2.122 1.00 17.46 ATOM 304 N TRP 36 1.087 43.091 0.234 1.00 10.38 ATOM 305 CA TRP 36 1.209 41.719 -0.076 1.00 10.38 ATOM 306 C TRP 36 1.258 41.303 -1.459 1.00 10.38 ATOM 307 O TRP 36 2.106 40.494 -1.829 1.00 10.38 ATOM 308 CB TRP 36 0.043 41.027 0.638 1.00 10.38 ATOM 309 CG TRP 36 0.045 39.542 0.408 1.00 10.38 ATOM 310 CD1 TRP 36 0.753 38.627 1.113 1.00 10.38 ATOM 311 CD2 TRP 36 -0.689 38.808 -0.587 1.00 10.38 ATOM 312 NE1 TRP 36 0.500 37.370 0.614 1.00 10.38 ATOM 313 CE2 TRP 36 -0.385 37.442 -0.438 1.00 10.38 ATOM 314 CE3 TRP 36 -1.579 39.195 -1.596 1.00 10.38 ATOM 315 CZ2 TRP 36 -0.944 36.470 -1.262 1.00 10.38 ATOM 316 CZ3 TRP 36 -2.140 38.222 -2.422 1.00 10.38 ATOM 317 CH2 TRP 36 -1.826 36.869 -2.256 1.00 10.38 ATOM 319 N ILE 37 0.384 41.809 -2.316 1.00 11.29 ATOM 320 CA ILE 37 0.384 41.556 -3.768 1.00 11.29 ATOM 321 C ILE 37 1.636 42.085 -4.318 1.00 11.29 ATOM 322 O ILE 37 2.268 41.439 -5.151 1.00 11.29 ATOM 323 CB ILE 37 -0.826 42.202 -4.479 1.00 11.29 ATOM 324 CG1 ILE 37 -2.133 41.565 -3.995 1.00 11.29 ATOM 325 CG2 ILE 37 -0.721 42.006 -5.993 1.00 11.29 ATOM 326 CD1 ILE 37 -3.352 42.332 -4.497 1.00 11.29 ATOM 328 N SER 38 1.999 43.355 -3.792 1.00 11.98 ATOM 329 CA SER 38 3.225 43.970 -4.398 1.00 11.98 ATOM 330 C SER 38 4.485 43.064 -4.145 1.00 11.98 ATOM 331 O SER 38 5.286 42.856 -5.054 1.00 11.98 ATOM 332 CB SER 38 3.465 45.367 -3.822 1.00 11.98 ATOM 333 OG SER 38 3.747 45.279 -2.434 1.00 11.98 ATOM 335 N SER 39 4.547 42.573 -2.863 1.00 15.76 ATOM 336 CA SER 39 5.665 41.757 -2.521 1.00 15.76 ATOM 337 C SER 39 5.764 40.455 -3.308 1.00 15.76 ATOM 338 O SER 39 6.854 40.066 -3.722 1.00 15.76 ATOM 339 CB SER 39 5.605 41.454 -1.022 1.00 15.76 ATOM 340 OG SER 39 4.448 40.685 -0.727 1.00 15.76 ATOM 342 N PHE 40 4.611 39.893 -3.456 1.00 14.91 ATOM 343 CA PHE 40 4.433 38.725 -4.182 1.00 14.91 ATOM 344 C PHE 40 4.606 38.862 -5.593 1.00 14.91 ATOM 345 O PHE 40 5.278 38.042 -6.214 1.00 14.91 ATOM 346 CB PHE 40 3.036 38.178 -3.877 1.00 14.91 ATOM 347 CG PHE 40 2.743 36.906 -4.639 1.00 14.91 ATOM 348 CD1 PHE 40 3.161 35.674 -4.139 1.00 14.91 ATOM 349 CD2 PHE 40 2.054 36.955 -5.848 1.00 14.91 ATOM 350 CE1 PHE 40 2.891 34.501 -4.842 1.00 14.91 ATOM 351 CE2 PHE 40 1.784 35.783 -6.553 1.00 14.91 ATOM 352 CZ PHE 40 2.203 34.558 -6.049 1.00 14.91 ATOM 354 N ILE 41 4.069 39.835 -6.193 1.00 14.61 ATOM 355 CA ILE 41 4.173 39.952 -7.573 1.00 14.61 ATOM 356 C ILE 41 5.587 40.562 -7.944 1.00 14.61 ATOM 357 O ILE 41 6.057 40.391 -9.067 1.00 14.61 ATOM 358 CB ILE 41 3.045 40.832 -8.157 1.00 14.61 ATOM 359 CG1 ILE 41 1.696 40.113 -8.047 1.00 14.61 ATOM 360 CG2 ILE 41 3.316 41.136 -9.632 1.00 14.61 ATOM 361 CD1 ILE 41 1.695 38.797 -8.818 1.00 14.61 ATOM 363 N GLY 42 6.292 41.263 -7.047 1.00 14.71 ATOM 364 CA GLY 42 7.668 41.536 -7.263 1.00 14.71 ATOM 365 C GLY 42 8.559 40.297 -7.424 1.00 14.71 ATOM 366 O GLY 42 8.391 39.318 -6.701 1.00 14.71 ATOM 368 N ARG 43 9.472 40.471 -8.403 1.00 14.01 ATOM 369 CA ARG 43 9.898 39.604 -9.399 1.00 14.01 ATOM 370 C ARG 43 8.970 39.012 -10.327 1.00 14.01 ATOM 371 O ARG 43 9.018 37.806 -10.562 1.00 14.01 ATOM 372 CB ARG 43 10.663 38.509 -8.651 1.00 14.01 ATOM 373 CG ARG 43 11.953 39.045 -8.030 1.00 14.01 ATOM 374 CD ARG 43 12.683 37.944 -7.262 1.00 14.01 ATOM 375 NE ARG 43 13.919 38.488 -6.662 1.00 14.01 ATOM 376 CZ ARG 43 14.714 37.758 -5.902 1.00 14.01 ATOM 377 NH1 ARG 43 15.808 38.282 -5.386 1.00 14.01 ATOM 378 NH2 ARG 43 14.414 36.500 -5.660 1.00 14.01 ATOM 380 N SER 44 8.064 39.686 -10.957 1.00 12.34 ATOM 381 CA SER 44 7.733 39.633 -12.383 1.00 12.34 ATOM 382 C SER 44 7.513 41.001 -12.797 1.00 12.34 ATOM 383 O SER 44 7.408 41.890 -11.955 1.00 12.34 ATOM 384 CB SER 44 6.487 38.795 -12.675 1.00 12.34 ATOM 385 OG SER 44 5.339 39.422 -12.123 1.00 12.34 ATOM 387 N LYS 45 7.425 41.259 -14.040 1.00 12.90 ATOM 388 CA LYS 45 7.108 42.488 -14.711 1.00 12.90 ATOM 389 C LYS 45 6.601 42.004 -16.009 1.00 12.90 ATOM 390 O LYS 45 6.868 40.866 -16.390 1.00 12.90 ATOM 391 CB LYS 45 8.295 43.431 -14.925 1.00 12.90 ATOM 392 CG LYS 45 9.342 42.815 -15.854 1.00 12.90 ATOM 393 CD LYS 45 10.533 43.758 -16.027 1.00 12.90 ATOM 394 CE LYS 45 11.563 43.156 -16.981 1.00 12.90 ATOM 395 NZ LYS 45 12.702 44.095 -17.157 1.00 12.90 TER END