####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS156_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS156_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 14 - 30 4.94 15.67 LONGEST_CONTINUOUS_SEGMENT: 17 24 - 40 4.97 14.57 LONGEST_CONTINUOUS_SEGMENT: 17 25 - 41 4.77 15.45 LONGEST_CONTINUOUS_SEGMENT: 17 26 - 42 4.78 16.45 LCS_AVERAGE: 35.33 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 27 - 37 1.91 13.90 LCS_AVERAGE: 15.13 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 30 - 35 0.95 13.06 LCS_AVERAGE: 8.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 10 3 4 4 6 6 7 7 9 11 13 14 14 15 16 18 19 20 23 23 24 LCS_GDT V 3 V 3 4 6 10 3 4 4 6 6 7 7 10 10 11 14 16 17 18 19 19 21 23 23 24 LCS_GDT Q 4 Q 4 4 6 13 3 4 4 6 6 7 8 10 10 11 14 16 17 18 19 19 21 23 23 24 LCS_GDT G 5 G 5 4 6 13 3 4 4 6 6 7 8 10 10 12 14 16 17 18 19 19 21 23 23 24 LCS_GDT P 6 P 6 4 6 13 3 4 4 5 6 7 7 9 10 12 12 16 17 18 19 19 20 23 23 24 LCS_GDT W 7 W 7 4 6 13 3 4 4 6 6 7 7 9 10 12 14 16 17 18 19 19 21 23 23 24 LCS_GDT V 8 V 8 4 4 13 3 5 5 5 6 6 7 9 10 12 14 16 17 18 19 19 21 23 23 24 LCS_GDT G 9 G 9 4 4 13 0 4 4 4 6 6 7 9 9 10 12 13 14 16 18 19 21 23 23 24 LCS_GDT S 10 S 10 3 4 13 0 3 5 5 6 6 7 8 9 10 12 13 14 14 15 18 19 20 22 24 LCS_GDT S 11 S 11 4 4 13 3 4 5 5 6 6 6 7 9 10 12 12 13 14 15 16 19 20 21 24 LCS_GDT Y 12 Y 12 4 4 13 3 4 5 5 5 5 5 6 7 8 9 10 10 13 13 16 19 19 21 24 LCS_GDT V 13 V 13 4 4 13 3 4 4 4 4 5 7 8 9 10 10 13 14 14 15 16 19 20 22 24 LCS_GDT A 14 A 14 4 4 17 3 4 4 4 6 6 7 9 9 10 12 14 15 16 17 18 19 20 22 24 LCS_GDT E 15 E 15 3 6 17 3 3 3 5 6 7 8 9 10 12 15 16 17 18 18 18 19 21 23 24 LCS_GDT T 16 T 16 3 6 17 3 3 4 5 9 10 10 11 13 13 15 16 17 18 19 19 21 23 23 24 LCS_GDT G 17 G 17 3 6 17 3 4 5 7 9 10 10 11 13 13 15 16 17 18 19 19 21 23 23 24 LCS_GDT Q 18 Q 18 3 6 17 0 3 4 5 6 7 8 9 12 12 14 16 17 18 19 19 21 23 23 24 LCS_GDT N 19 N 19 4 6 17 3 5 5 5 6 7 8 9 12 13 15 16 17 18 19 19 21 23 23 24 LCS_GDT W 20 W 20 4 6 17 3 5 5 5 6 7 8 9 12 13 15 16 17 18 18 19 20 21 23 24 LCS_GDT A 21 A 21 4 6 17 3 5 5 6 6 7 8 9 12 13 15 16 17 18 18 19 19 21 23 24 LCS_GDT S 22 S 22 4 4 17 3 5 5 6 6 7 8 9 12 13 15 16 17 18 18 19 19 21 21 23 LCS_GDT L 23 L 23 4 5 17 3 4 4 6 6 6 8 9 11 13 15 16 17 18 18 19 20 21 23 24 LCS_GDT A 24 A 24 4 5 17 3 4 4 6 6 6 7 9 10 11 11 14 15 18 18 19 20 21 23 24 LCS_GDT A 25 A 25 4 5 17 3 4 4 4 6 7 7 9 12 13 15 16 17 18 18 19 20 21 23 24 LCS_GDT N 26 N 26 4 5 17 3 4 4 4 6 7 8 9 12 13 15 16 17 18 18 19 20 21 23 24 LCS_GDT E 27 E 27 3 11 17 3 3 4 6 10 10 12 12 13 14 15 16 17 18 19 19 21 23 23 24 LCS_GDT L 28 L 28 3 11 17 3 6 7 8 10 10 12 12 13 14 15 16 17 18 19 19 21 23 23 24 LCS_GDT R 29 R 29 3 11 17 3 3 4 7 9 10 12 12 13 14 15 16 17 18 19 19 21 23 23 24 LCS_GDT V 30 V 30 6 11 17 3 5 6 8 10 10 12 12 13 14 14 16 17 18 19 19 21 23 23 24 LCS_GDT T 31 T 31 6 11 17 3 6 7 8 10 10 12 12 13 14 14 16 17 18 19 19 21 23 23 24 LCS_GDT E 32 E 32 6 11 17 3 6 7 8 10 10 12 12 13 14 14 16 17 18 19 19 21 23 23 24 LCS_GDT R 33 R 33 6 11 17 3 6 7 8 10 10 12 12 13 14 14 16 17 18 19 19 21 23 23 24 LCS_GDT P 34 P 34 6 11 17 3 6 7 8 10 10 12 12 13 14 14 16 17 18 19 19 21 23 23 24 LCS_GDT F 35 F 35 6 11 17 3 6 6 8 10 10 12 12 13 14 14 16 17 18 19 19 21 23 23 24 LCS_GDT W 36 W 36 4 11 17 3 4 7 8 10 10 12 12 13 14 14 15 16 17 17 19 21 23 23 24 LCS_GDT I 37 I 37 4 11 17 3 4 7 8 10 10 12 12 13 14 14 15 16 17 17 19 21 23 23 24 LCS_GDT S 38 S 38 3 9 17 0 3 5 5 9 9 12 12 13 14 14 15 16 17 17 19 20 21 23 24 LCS_GDT S 39 S 39 3 4 17 0 3 3 4 4 7 9 11 13 14 14 15 16 17 17 19 19 21 23 24 LCS_GDT F 40 F 40 3 4 17 0 3 3 4 4 6 6 9 12 14 15 16 17 18 18 19 19 21 23 24 LCS_GDT I 41 I 41 3 5 17 0 3 4 6 6 6 8 9 12 13 15 16 17 18 18 19 19 21 21 24 LCS_GDT G 42 G 42 3 5 17 1 3 4 6 6 6 8 9 12 12 13 14 16 17 17 19 19 21 21 22 LCS_GDT R 43 R 43 3 5 16 0 3 3 4 4 5 7 7 8 9 11 14 15 15 17 19 19 21 21 22 LCS_GDT S 44 S 44 3 5 15 0 3 3 4 4 5 5 6 7 7 9 11 13 14 14 15 16 18 20 22 LCS_GDT K 45 K 45 0 5 10 0 0 3 4 4 5 5 6 7 7 8 8 12 12 12 13 14 14 15 16 LCS_AVERAGE LCS_A: 19.73 ( 8.73 15.13 35.33 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 6 7 8 10 10 12 12 13 14 15 16 17 18 19 19 21 23 23 24 GDT PERCENT_AT 6.82 13.64 15.91 18.18 22.73 22.73 27.27 27.27 29.55 31.82 34.09 36.36 38.64 40.91 43.18 43.18 47.73 52.27 52.27 54.55 GDT RMS_LOCAL 0.00 0.64 1.15 1.28 1.66 1.66 2.30 2.30 2.91 3.33 3.94 4.10 4.44 4.80 5.00 5.00 5.87 6.22 6.22 6.48 GDT RMS_ALL_AT 14.34 13.57 14.12 14.11 13.73 13.73 14.34 14.34 13.97 15.29 15.61 15.78 15.58 12.02 12.10 12.10 12.10 11.91 11.91 12.02 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.782 0 0.084 0.108 9.796 0.000 0.000 - LGA V 3 V 3 11.546 0 0.000 0.080 13.523 0.000 0.000 13.523 LGA Q 4 Q 4 17.242 0 0.130 0.906 19.802 0.000 0.000 18.182 LGA G 5 G 5 21.855 0 0.208 0.208 21.855 0.000 0.000 - LGA P 6 P 6 22.469 0 0.699 0.573 26.434 0.000 0.000 26.434 LGA W 7 W 7 21.255 0 0.313 1.198 21.727 0.000 0.000 21.318 LGA V 8 V 8 17.061 0 0.635 0.605 18.883 0.000 0.000 14.469 LGA G 9 G 9 20.508 0 0.515 0.515 20.508 0.000 0.000 - LGA S 10 S 10 22.855 0 0.648 0.688 25.647 0.000 0.000 25.647 LGA S 11 S 11 19.617 0 0.555 0.788 20.405 0.000 0.000 15.813 LGA Y 12 Y 12 18.359 0 0.081 1.079 21.242 0.000 0.000 21.166 LGA V 13 V 13 18.501 0 0.623 0.656 19.825 0.000 0.000 19.636 LGA A 14 A 14 16.877 0 0.589 0.562 17.063 0.000 0.000 - LGA E 15 E 15 12.240 0 0.648 1.236 15.105 0.000 0.000 15.105 LGA T 16 T 16 10.194 0 0.573 0.937 10.867 0.000 0.000 10.158 LGA G 17 G 17 12.649 0 0.653 0.653 16.013 0.000 0.000 - LGA Q 18 Q 18 14.365 0 0.476 0.538 18.717 0.000 0.000 18.717 LGA N 19 N 19 16.267 0 0.630 0.982 19.463 0.000 0.000 19.463 LGA W 20 W 20 19.209 0 0.116 1.111 25.351 0.000 0.000 24.615 LGA A 21 A 21 18.646 0 0.653 0.601 19.053 0.000 0.000 - LGA S 22 S 22 22.105 0 0.087 0.607 25.788 0.000 0.000 25.788 LGA L 23 L 23 17.135 0 0.582 1.429 19.122 0.000 0.000 19.122 LGA A 24 A 24 12.771 0 0.633 0.605 14.758 0.000 0.000 - LGA A 25 A 25 11.642 0 0.315 0.329 13.835 0.000 0.000 - LGA N 26 N 26 8.442 0 0.622 1.143 13.500 0.000 0.000 11.668 LGA E 27 E 27 2.672 0 0.663 1.363 7.023 23.636 10.707 6.447 LGA L 28 L 28 1.341 0 0.279 0.260 2.481 58.182 54.773 2.481 LGA R 29 R 29 3.392 0 0.516 1.457 9.769 22.273 8.099 8.389 LGA V 30 V 30 2.591 0 0.161 1.178 6.812 60.000 34.286 6.812 LGA T 31 T 31 2.462 0 0.549 0.953 6.795 45.455 26.753 6.795 LGA E 32 E 32 1.113 0 0.232 0.812 3.051 70.455 51.717 2.368 LGA R 33 R 33 1.226 0 0.653 1.472 7.472 42.727 30.579 4.980 LGA P 34 P 34 1.769 0 0.696 0.645 3.893 48.636 37.143 3.893 LGA F 35 F 35 2.611 0 0.060 1.359 11.975 35.909 14.050 11.975 LGA W 36 W 36 0.745 0 0.033 0.062 2.790 65.909 52.987 2.790 LGA I 37 I 37 1.576 0 0.646 0.608 5.019 52.273 29.091 4.952 LGA S 38 S 38 3.828 0 0.676 0.839 6.914 13.182 9.091 6.914 LGA S 39 S 39 7.983 0 0.713 0.603 9.695 0.000 0.000 8.061 LGA F 40 F 40 8.566 0 0.639 1.055 9.611 0.000 0.000 9.611 LGA I 41 I 41 12.841 0 0.119 1.071 16.503 0.000 0.000 16.005 LGA G 42 G 42 17.818 0 0.688 0.688 18.353 0.000 0.000 - LGA R 43 R 43 19.352 0 0.265 1.248 23.277 0.000 0.000 23.277 LGA S 44 S 44 19.514 0 0.653 0.776 22.487 0.000 0.000 18.924 LGA K 45 K 45 19.001 0 0.651 0.764 21.338 0.000 0.000 12.909 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.412 11.325 12.185 12.242 8.165 3.377 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.30 25.568 23.929 0.500 LGA_LOCAL RMSD: 2.302 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 14.339 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.412 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.707205 * X + 0.502907 * Y + 0.496937 * Z + 150.042343 Y_new = -0.631718 * X + -0.765099 * Y + -0.124726 * Z + 216.289948 Z_new = 0.317480 * X + -0.402131 * Y + 0.858777 * Z + -153.057709 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.412513 -0.323071 -0.437935 [DEG: -138.2269 -18.5106 -25.0918 ] ZXZ: 1.324886 0.537919 2.473290 [DEG: 75.9104 30.8205 141.7091 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS156_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS156_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.30 23.929 11.41 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS156_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 4RU5_C ATOM 20 N ALA 2 16.026 37.641 16.028 1.00 2.37 ATOM 22 CA ALA 2 16.037 36.979 17.312 1.00 2.37 ATOM 24 CB ALA 2 17.414 36.404 17.702 1.00 2.37 ATOM 28 C ALA 2 15.606 37.961 18.375 1.00 2.37 ATOM 29 O ALA 2 16.015 39.123 18.373 1.00 2.37 ATOM 30 N VAL 3 14.717 37.499 19.279 1.00 2.37 ATOM 32 CA VAL 3 14.010 38.325 20.224 1.00 2.37 ATOM 34 CB VAL 3 12.502 38.191 20.051 1.00 2.37 ATOM 36 CG1 VAL 3 11.728 39.039 21.079 1.00 2.37 ATOM 40 CG2 VAL 3 12.125 38.588 18.611 1.00 2.37 ATOM 44 C VAL 3 14.391 37.911 21.620 1.00 2.37 ATOM 45 O VAL 3 14.208 36.756 22.013 1.00 2.37 ATOM 46 N GLN 4 14.909 38.893 22.393 1.00 2.52 ATOM 48 CA GLN 4 15.061 38.827 23.823 1.00 2.52 ATOM 50 CB GLN 4 16.530 38.985 24.292 1.00 2.52 ATOM 53 CG GLN 4 17.476 37.881 23.776 1.00 2.52 ATOM 56 CD GLN 4 17.077 36.506 24.325 1.00 2.52 ATOM 57 OE1 GLN 4 16.826 36.351 25.518 1.00 2.52 ATOM 58 NE2 GLN 4 17.008 35.474 23.445 1.00 2.52 ATOM 61 C GLN 4 14.257 40.013 24.289 1.00 2.52 ATOM 62 O GLN 4 14.617 41.160 24.027 1.00 2.52 ATOM 63 N GLY 5 13.108 39.755 24.950 1.00 2.74 ATOM 65 CA GLY 5 12.163 40.767 25.375 1.00 2.74 ATOM 68 C GLY 5 11.113 40.921 24.298 1.00 2.74 ATOM 69 O GLY 5 11.479 41.367 23.209 1.00 2.74 ATOM 70 N PRO 6 9.824 40.603 24.497 1.00 3.52 ATOM 71 CA PRO 6 8.811 40.641 23.447 1.00 3.52 ATOM 73 CB PRO 6 7.547 40.055 24.093 1.00 3.52 ATOM 76 CG PRO 6 7.733 40.309 25.595 1.00 3.52 ATOM 79 CD PRO 6 9.253 40.195 25.781 1.00 3.52 ATOM 82 C PRO 6 8.576 42.055 22.985 1.00 3.52 ATOM 83 O PRO 6 8.676 42.971 23.801 1.00 3.52 ATOM 84 N TRP 7 8.340 42.246 21.667 1.00 4.74 ATOM 86 CA TRP 7 8.485 43.556 21.072 1.00 4.74 ATOM 88 CB TRP 7 9.535 43.526 19.921 1.00 4.74 ATOM 91 CG TRP 7 9.266 42.580 18.756 1.00 4.74 ATOM 92 CD1 TRP 7 9.626 41.273 18.589 1.00 4.74 ATOM 94 NE1 TRP 7 9.272 40.832 17.331 1.00 4.74 ATOM 96 CE2 TRP 7 8.724 41.890 16.637 1.00 4.74 ATOM 97 CZ2 TRP 7 8.256 41.988 15.329 1.00 4.74 ATOM 99 CH2 TRP 7 7.780 43.234 14.889 1.00 4.74 ATOM 101 CZ3 TRP 7 7.783 44.350 15.742 1.00 4.74 ATOM 103 CE3 TRP 7 8.248 44.249 17.061 1.00 4.74 ATOM 105 CD2 TRP 7 8.720 43.010 17.496 1.00 4.74 ATOM 106 C TRP 7 7.173 44.094 20.535 1.00 4.74 ATOM 107 O TRP 7 7.158 45.208 20.018 1.00 4.74 ATOM 108 N VAL 8 6.055 43.327 20.621 1.00 6.21 ATOM 110 CA VAL 8 4.819 43.557 19.872 1.00 6.21 ATOM 112 CB VAL 8 3.847 42.381 20.057 1.00 6.21 ATOM 114 CG1 VAL 8 2.469 42.609 19.378 1.00 6.21 ATOM 118 CG2 VAL 8 4.512 41.085 19.533 1.00 6.21 ATOM 122 C VAL 8 4.134 44.888 20.205 1.00 6.21 ATOM 123 O VAL 8 4.078 45.292 21.366 1.00 6.21 ATOM 124 N GLY 9 3.610 45.609 19.170 1.00 7.67 ATOM 126 CA GLY 9 2.918 46.874 19.359 1.00 7.67 ATOM 129 C GLY 9 2.066 47.229 18.166 1.00 7.67 ATOM 130 O GLY 9 2.294 46.753 17.054 1.00 7.67 ATOM 131 N SER 10 1.039 48.095 18.379 1.00 8.04 ATOM 133 CA SER 10 0.013 48.430 17.398 1.00 8.04 ATOM 135 CB SER 10 -1.150 49.251 18.007 1.00 8.04 ATOM 138 OG SER 10 -1.791 48.516 19.041 1.00 8.04 ATOM 140 C SER 10 0.564 49.256 16.254 1.00 8.04 ATOM 141 O SER 10 1.384 50.150 16.466 1.00 8.04 ATOM 142 N SER 11 0.127 48.955 15.005 1.00 7.70 ATOM 144 CA SER 11 0.698 49.566 13.824 1.00 7.70 ATOM 146 CB SER 11 1.998 48.843 13.346 1.00 7.70 ATOM 149 OG SER 11 1.750 47.515 12.894 1.00 7.70 ATOM 151 C SER 11 -0.314 49.665 12.711 1.00 7.70 ATOM 152 O SER 11 -1.473 49.294 12.874 1.00 7.70 ATOM 153 N TYR 12 0.110 50.223 11.547 1.00 7.10 ATOM 155 CA TYR 12 -0.739 50.390 10.388 1.00 7.10 ATOM 157 CB TYR 12 -0.368 51.691 9.617 1.00 7.10 ATOM 160 CG TYR 12 -1.319 51.993 8.484 1.00 7.10 ATOM 161 CD1 TYR 12 -2.640 52.394 8.759 1.00 7.10 ATOM 163 CE1 TYR 12 -3.519 52.738 7.722 1.00 7.10 ATOM 165 CZ TYR 12 -3.075 52.703 6.392 1.00 7.10 ATOM 166 OH TYR 12 -3.951 53.063 5.347 1.00 7.10 ATOM 168 CE2 TYR 12 -1.756 52.319 6.102 1.00 7.10 ATOM 170 CD2 TYR 12 -0.884 51.973 7.146 1.00 7.10 ATOM 172 C TYR 12 -0.662 49.144 9.517 1.00 7.10 ATOM 173 O TYR 12 -1.684 48.670 9.022 1.00 7.10 ATOM 174 N VAL 13 0.559 48.587 9.320 1.00 6.61 ATOM 176 CA VAL 13 0.786 47.344 8.615 1.00 6.61 ATOM 178 CB VAL 13 1.355 47.511 7.212 1.00 6.61 ATOM 180 CG1 VAL 13 1.533 46.125 6.553 1.00 6.61 ATOM 184 CG2 VAL 13 0.445 48.435 6.378 1.00 6.61 ATOM 188 C VAL 13 1.822 46.628 9.444 1.00 6.61 ATOM 189 O VAL 13 2.801 47.238 9.869 1.00 6.61 ATOM 190 N ALA 14 1.620 45.316 9.693 1.00 6.81 ATOM 192 CA ALA 14 2.439 44.523 10.568 1.00 6.81 ATOM 194 CB ALA 14 1.575 43.998 11.734 1.00 6.81 ATOM 198 C ALA 14 2.959 43.311 9.831 1.00 6.81 ATOM 199 O ALA 14 2.234 42.337 9.645 1.00 6.81 ATOM 200 N GLU 15 4.245 43.323 9.413 1.00 7.52 ATOM 202 CA GLU 15 4.903 42.156 8.872 1.00 7.52 ATOM 204 CB GLU 15 5.868 42.482 7.705 1.00 7.52 ATOM 207 CG GLU 15 5.164 42.981 6.424 1.00 7.52 ATOM 210 CD GLU 15 6.203 43.216 5.326 1.00 7.52 ATOM 211 OE1 GLU 15 7.109 44.064 5.540 1.00 7.52 ATOM 212 OE2 GLU 15 6.105 42.558 4.257 1.00 7.52 ATOM 213 C GLU 15 5.691 41.549 9.991 1.00 7.52 ATOM 214 O GLU 15 6.418 42.246 10.699 1.00 7.52 ATOM 215 N THR 16 5.522 40.228 10.202 1.00 8.45 ATOM 217 CA THR 16 6.171 39.539 11.284 1.00 8.45 ATOM 219 CB THR 16 5.217 39.284 12.440 1.00 8.45 ATOM 221 CG2 THR 16 6.023 38.714 13.612 1.00 8.45 ATOM 225 OG1 THR 16 4.639 40.504 12.889 1.00 8.45 ATOM 227 C THR 16 6.637 38.238 10.687 1.00 8.45 ATOM 228 O THR 16 5.868 37.280 10.586 1.00 8.45 ATOM 229 N GLY 17 7.922 38.191 10.260 1.00 9.02 ATOM 231 CA GLY 17 8.487 37.039 9.595 1.00 9.02 ATOM 234 C GLY 17 9.899 36.799 10.046 1.00 9.02 ATOM 235 O GLY 17 10.625 37.730 10.392 1.00 9.02 ATOM 236 N GLN 18 10.303 35.500 10.031 1.00 9.05 ATOM 238 CA GLN 18 11.605 34.967 10.403 1.00 9.05 ATOM 240 CB GLN 18 12.731 35.314 9.384 1.00 9.05 ATOM 243 CG GLN 18 12.531 34.700 7.982 1.00 9.05 ATOM 246 CD GLN 18 12.675 33.174 8.012 1.00 9.05 ATOM 247 OE1 GLN 18 13.661 32.653 8.530 1.00 9.05 ATOM 248 NE2 GLN 18 11.691 32.420 7.461 1.00 9.05 ATOM 251 C GLN 18 12.024 35.321 11.807 1.00 9.05 ATOM 252 O GLN 18 13.193 35.617 12.064 1.00 9.05 ATOM 253 N ASN 19 11.062 35.294 12.760 1.00 8.68 ATOM 255 CA ASN 19 11.357 35.606 14.137 1.00 8.68 ATOM 257 CB ASN 19 10.299 36.487 14.849 1.00 8.68 ATOM 260 CG ASN 19 10.294 37.892 14.241 1.00 8.68 ATOM 261 OD1 ASN 19 11.241 38.367 13.620 1.00 8.68 ATOM 262 ND2 ASN 19 9.198 38.639 14.496 1.00 8.68 ATOM 265 C ASN 19 11.606 34.369 14.947 1.00 8.68 ATOM 266 O ASN 19 11.160 33.270 14.627 1.00 8.68 ATOM 267 N TRP 20 12.360 34.548 16.048 1.00 8.04 ATOM 269 CA TRP 20 12.527 33.529 17.041 1.00 8.04 ATOM 271 CB TRP 20 13.811 32.682 16.850 1.00 8.04 ATOM 274 CG TRP 20 14.002 31.536 17.837 1.00 8.04 ATOM 275 CD1 TRP 20 14.933 31.422 18.833 1.00 8.04 ATOM 277 NE1 TRP 20 14.729 30.267 19.552 1.00 8.04 ATOM 279 CE2 TRP 20 13.623 29.621 19.043 1.00 8.04 ATOM 280 CZ2 TRP 20 12.990 28.442 19.429 1.00 8.04 ATOM 282 CH2 TRP 20 11.843 28.046 18.722 1.00 8.04 ATOM 284 CZ3 TRP 20 11.352 28.814 17.651 1.00 8.04 ATOM 286 CE3 TRP 20 11.997 29.999 17.257 1.00 8.04 ATOM 288 CD2 TRP 20 13.133 30.393 17.966 1.00 8.04 ATOM 289 C TRP 20 12.521 34.234 18.356 1.00 8.04 ATOM 290 O TRP 20 13.499 34.858 18.762 1.00 8.04 ATOM 291 N ALA 21 11.386 34.118 19.073 1.00 7.55 ATOM 293 CA ALA 21 11.334 34.432 20.467 1.00 7.55 ATOM 295 CB ALA 21 9.970 34.971 20.958 1.00 7.55 ATOM 299 C ALA 21 11.643 33.153 21.154 1.00 7.55 ATOM 300 O ALA 21 11.036 32.118 20.875 1.00 7.55 ATOM 301 N SER 22 12.580 33.220 22.128 1.00 7.27 ATOM 303 CA SER 22 12.918 32.106 22.991 1.00 7.27 ATOM 305 CB SER 22 14.038 32.441 24.005 1.00 7.27 ATOM 308 OG SER 22 15.250 32.745 23.327 1.00 7.27 ATOM 310 C SER 22 11.698 31.651 23.769 1.00 7.27 ATOM 311 O SER 22 11.629 30.516 24.235 1.00 7.27 ATOM 312 N LEU 23 10.687 32.546 23.876 1.00 6.93 ATOM 314 CA LEU 23 9.386 32.245 24.396 1.00 6.93 ATOM 316 CB LEU 23 8.752 33.537 24.973 1.00 6.93 ATOM 319 CG LEU 23 7.372 33.401 25.644 1.00 6.93 ATOM 321 CD1 LEU 23 7.440 32.485 26.880 1.00 6.93 ATOM 325 CD2 LEU 23 6.823 34.789 26.025 1.00 6.93 ATOM 329 C LEU 23 8.520 31.666 23.297 1.00 6.93 ATOM 330 O LEU 23 8.000 32.355 22.417 1.00 6.93 ATOM 331 N ALA 24 8.298 30.336 23.364 1.00 6.43 ATOM 333 CA ALA 24 7.265 29.676 22.608 1.00 6.43 ATOM 335 CB ALA 24 7.428 28.141 22.564 1.00 6.43 ATOM 339 C ALA 24 5.959 30.037 23.272 1.00 6.43 ATOM 340 O ALA 24 5.902 30.262 24.480 1.00 6.43 ATOM 341 N ALA 25 4.910 30.149 22.445 1.00 5.86 ATOM 343 CA ALA 25 3.604 30.687 22.731 1.00 5.86 ATOM 345 CB ALA 25 2.863 30.060 23.935 1.00 5.86 ATOM 349 C ALA 25 3.560 32.193 22.774 1.00 5.86 ATOM 350 O ALA 25 2.607 32.768 23.293 1.00 5.86 ATOM 351 N ASN 26 4.550 32.879 22.155 1.00 5.37 ATOM 353 CA ASN 26 4.505 34.303 21.940 1.00 5.37 ATOM 355 CB ASN 26 5.941 34.894 21.932 1.00 5.37 ATOM 358 CG ASN 26 5.951 36.416 21.796 1.00 5.37 ATOM 359 OD1 ASN 26 5.870 36.952 20.696 1.00 5.37 ATOM 360 ND2 ASN 26 5.977 37.148 22.935 1.00 5.37 ATOM 363 C ASN 26 3.785 34.561 20.643 1.00 5.37 ATOM 364 O ASN 26 4.162 34.044 19.594 1.00 5.37 ATOM 365 N GLU 27 2.729 35.406 20.712 1.00 5.04 ATOM 367 CA GLU 27 1.876 35.784 19.614 1.00 5.04 ATOM 369 CB GLU 27 0.719 36.742 20.041 1.00 5.04 ATOM 372 CG GLU 27 -0.324 36.158 21.015 1.00 5.04 ATOM 375 CD GLU 27 0.089 36.249 22.494 1.00 5.04 ATOM 376 OE1 GLU 27 1.193 36.761 22.822 1.00 5.04 ATOM 377 OE2 GLU 27 -0.730 35.795 23.337 1.00 5.04 ATOM 378 C GLU 27 2.681 36.546 18.608 1.00 5.04 ATOM 379 O GLU 27 3.507 37.380 18.974 1.00 5.04 ATOM 380 N LEU 28 2.451 36.305 17.296 1.00 4.80 ATOM 382 CA LEU 28 3.103 37.128 16.299 1.00 4.80 ATOM 384 CB LEU 28 3.146 36.507 14.889 1.00 4.80 ATOM 387 CG LEU 28 4.045 35.253 14.788 1.00 4.80 ATOM 389 CD1 LEU 28 3.976 34.623 13.388 1.00 4.80 ATOM 393 CD2 LEU 28 5.508 35.441 15.249 1.00 4.80 ATOM 397 C LEU 28 2.417 38.478 16.285 1.00 4.80 ATOM 398 O LEU 28 3.080 39.512 16.321 1.00 4.80 ATOM 399 N ARG 29 1.065 38.459 16.299 1.00 4.67 ATOM 401 CA ARG 29 0.204 39.612 16.388 1.00 4.67 ATOM 403 CB ARG 29 -0.214 40.070 14.957 1.00 4.67 ATOM 406 CG ARG 29 -1.312 41.143 14.792 1.00 4.67 ATOM 409 CD ARG 29 -1.074 42.504 15.439 1.00 4.67 ATOM 412 NE ARG 29 0.133 43.158 14.862 1.00 4.67 ATOM 414 CZ ARG 29 0.633 44.284 15.429 1.00 4.67 ATOM 415 NH1 ARG 29 -0.014 44.902 16.444 1.00 4.67 ATOM 418 NH2 ARG 29 1.802 44.800 14.994 1.00 4.67 ATOM 421 C ARG 29 -1.015 39.253 17.200 1.00 4.67 ATOM 422 O ARG 29 -1.588 38.179 17.042 1.00 4.67 ATOM 423 N VAL 30 -1.433 40.183 18.097 1.00 4.54 ATOM 425 CA VAL 30 -2.632 40.125 18.901 1.00 4.54 ATOM 427 CB VAL 30 -2.462 40.831 20.240 1.00 4.54 ATOM 429 CG1 VAL 30 -1.325 40.130 21.012 1.00 4.54 ATOM 433 CG2 VAL 30 -2.161 42.342 20.056 1.00 4.54 ATOM 437 C VAL 30 -3.766 40.736 18.114 1.00 4.54 ATOM 438 O VAL 30 -3.541 41.600 17.266 1.00 4.54 ATOM 439 N THR 31 -5.013 40.276 18.373 1.00 4.42 ATOM 441 CA THR 31 -6.165 40.471 17.514 1.00 4.42 ATOM 443 CB THR 31 -7.332 39.633 18.008 1.00 4.42 ATOM 445 CG2 THR 31 -8.552 39.741 17.076 1.00 4.42 ATOM 449 OG1 THR 31 -6.954 38.262 18.077 1.00 4.42 ATOM 451 C THR 31 -6.579 41.920 17.425 1.00 4.42 ATOM 452 O THR 31 -7.215 42.495 18.306 1.00 4.42 ATOM 453 N GLU 32 -6.212 42.527 16.286 1.00 4.54 ATOM 455 CA GLU 32 -6.533 43.865 15.907 1.00 4.54 ATOM 457 CB GLU 32 -5.326 44.820 16.080 1.00 4.54 ATOM 460 CG GLU 32 -4.932 45.026 17.556 1.00 4.54 ATOM 463 CD GLU 32 -3.739 45.967 17.735 1.00 4.54 ATOM 464 OE1 GLU 32 -3.179 46.497 16.741 1.00 4.54 ATOM 465 OE2 GLU 32 -3.347 46.146 18.917 1.00 4.54 ATOM 466 C GLU 32 -6.836 43.579 14.475 1.00 4.54 ATOM 467 O GLU 32 -5.996 43.737 13.588 1.00 4.54 ATOM 468 N ARG 33 -8.062 43.054 14.245 1.00 4.91 ATOM 470 CA ARG 33 -8.472 42.463 12.991 1.00 4.91 ATOM 472 CB ARG 33 -9.904 41.886 13.008 1.00 4.91 ATOM 475 CG ARG 33 -9.990 40.673 13.935 1.00 4.91 ATOM 478 CD ARG 33 -11.360 39.988 14.029 1.00 4.91 ATOM 481 NE ARG 33 -11.723 39.436 12.681 1.00 4.91 ATOM 483 CZ ARG 33 -11.296 38.226 12.230 1.00 4.91 ATOM 484 NH1 ARG 33 -11.704 37.789 11.018 1.00 4.91 ATOM 487 NH2 ARG 33 -10.439 37.447 12.929 1.00 4.91 ATOM 490 C ARG 33 -8.306 43.312 11.754 1.00 4.91 ATOM 491 O ARG 33 -7.873 42.726 10.760 1.00 4.91 ATOM 492 N PRO 34 -8.595 44.615 11.680 1.00 5.49 ATOM 493 CA PRO 34 -8.492 45.343 10.427 1.00 5.49 ATOM 495 CB PRO 34 -9.291 46.639 10.660 1.00 5.49 ATOM 498 CG PRO 34 -9.229 46.852 12.173 1.00 5.49 ATOM 501 CD PRO 34 -9.288 45.418 12.697 1.00 5.49 ATOM 504 C PRO 34 -7.085 45.675 9.996 1.00 5.49 ATOM 505 O PRO 34 -6.949 46.155 8.872 1.00 5.49 ATOM 506 N PHE 35 -6.025 45.485 10.820 1.00 6.27 ATOM 508 CA PHE 35 -4.712 45.945 10.402 1.00 6.27 ATOM 510 CB PHE 35 -3.762 46.325 11.560 1.00 6.27 ATOM 513 CG PHE 35 -4.296 47.588 12.187 1.00 6.27 ATOM 514 CD1 PHE 35 -4.978 47.532 13.408 1.00 6.27 ATOM 516 CE1 PHE 35 -5.515 48.683 14.001 1.00 6.27 ATOM 518 CZ PHE 35 -5.382 49.921 13.357 1.00 6.27 ATOM 520 CE2 PHE 35 -4.716 49.999 12.125 1.00 6.27 ATOM 522 CD2 PHE 35 -4.185 48.837 11.543 1.00 6.27 ATOM 524 C PHE 35 -4.077 44.915 9.507 1.00 6.27 ATOM 525 O PHE 35 -4.140 43.711 9.756 1.00 6.27 ATOM 526 N TRP 36 -3.463 45.385 8.393 1.00 7.10 ATOM 528 CA TRP 36 -2.925 44.516 7.370 1.00 7.10 ATOM 530 CB TRP 36 -2.579 45.278 6.069 1.00 7.10 ATOM 533 CG TRP 36 -3.816 45.827 5.372 1.00 7.10 ATOM 534 CD1 TRP 36 -4.313 47.101 5.408 1.00 7.10 ATOM 536 NE1 TRP 36 -5.452 47.194 4.637 1.00 7.10 ATOM 538 CE2 TRP 36 -5.688 45.971 4.052 1.00 7.10 ATOM 539 CZ2 TRP 36 -6.682 45.551 3.171 1.00 7.10 ATOM 541 CH2 TRP 36 -6.651 44.220 2.723 1.00 7.10 ATOM 543 CZ3 TRP 36 -5.650 43.334 3.160 1.00 7.10 ATOM 545 CE3 TRP 36 -4.654 43.753 4.059 1.00 7.10 ATOM 547 CD2 TRP 36 -4.681 45.081 4.491 1.00 7.10 ATOM 548 C TRP 36 -1.707 43.807 7.916 1.00 7.10 ATOM 549 O TRP 36 -0.905 44.394 8.633 1.00 7.10 ATOM 550 N ILE 37 -1.615 42.493 7.650 1.00 8.07 ATOM 552 CA ILE 37 -0.757 41.572 8.363 1.00 8.07 ATOM 554 CB ILE 37 -1.565 40.802 9.419 1.00 8.07 ATOM 556 CG2 ILE 37 -2.888 40.257 8.825 1.00 8.07 ATOM 560 CG1 ILE 37 -0.735 39.790 10.260 1.00 8.07 ATOM 563 CD1 ILE 37 -1.479 39.206 11.465 1.00 8.07 ATOM 567 C ILE 37 -0.088 40.592 7.429 1.00 8.07 ATOM 568 O ILE 37 -0.721 40.098 6.502 1.00 8.07 ATOM 569 N SER 38 1.213 40.275 7.675 1.00 9.09 ATOM 571 CA SER 38 1.917 39.173 7.031 1.00 9.09 ATOM 573 CB SER 38 3.015 39.652 6.034 1.00 9.09 ATOM 576 OG SER 38 3.680 38.574 5.376 1.00 9.09 ATOM 578 C SER 38 2.559 38.296 8.120 1.00 9.09 ATOM 579 O SER 38 3.189 38.844 9.025 1.00 9.09 ATOM 580 N SER 39 2.401 36.929 8.024 1.00 9.82 ATOM 582 CA SER 39 2.912 35.883 8.938 1.00 9.82 ATOM 584 CB SER 39 2.068 35.777 10.237 1.00 9.82 ATOM 587 OG SER 39 0.735 35.340 9.986 1.00 9.82 ATOM 589 C SER 39 2.988 34.485 8.228 1.00 9.82 ATOM 590 O SER 39 2.512 34.416 7.099 1.00 9.82 ATOM 591 N PHE 40 3.592 33.369 8.832 1.00 10.13 ATOM 593 CA PHE 40 3.926 32.073 8.159 1.00 10.13 ATOM 595 CB PHE 40 5.344 32.171 7.466 1.00 10.13 ATOM 598 CG PHE 40 5.484 33.246 6.421 1.00 10.13 ATOM 599 CD1 PHE 40 6.038 34.498 6.773 1.00 10.13 ATOM 601 CE1 PHE 40 6.225 35.500 5.810 1.00 10.13 ATOM 603 CZ PHE 40 5.882 35.253 4.474 1.00 10.13 ATOM 605 CE2 PHE 40 5.365 34.003 4.108 1.00 10.13 ATOM 607 CD2 PHE 40 5.158 33.011 5.076 1.00 10.13 ATOM 609 C PHE 40 4.233 30.904 9.151 1.00 10.13 ATOM 610 O PHE 40 5.084 31.103 10.013 1.00 10.13 ATOM 611 N ILE 41 3.655 29.649 9.062 1.00 9.96 ATOM 613 CA ILE 41 4.041 28.515 9.927 1.00 9.96 ATOM 615 CB ILE 41 3.557 28.732 11.373 1.00 9.96 ATOM 617 CG2 ILE 41 2.017 28.846 11.416 1.00 9.96 ATOM 621 CG1 ILE 41 4.158 27.751 12.408 1.00 9.96 ATOM 624 CD1 ILE 41 3.959 28.193 13.862 1.00 9.96 ATOM 628 C ILE 41 3.553 27.182 9.359 1.00 9.96 ATOM 629 O ILE 41 2.623 27.144 8.561 1.00 9.96 ATOM 630 N GLY 42 4.147 26.022 9.753 1.00 9.53 ATOM 632 CA GLY 42 3.650 24.742 9.297 1.00 9.53 ATOM 635 C GLY 42 4.207 23.645 10.131 1.00 9.53 ATOM 636 O GLY 42 5.285 23.749 10.715 1.00 9.53 ATOM 637 N ARG 43 3.472 22.513 10.156 1.00 9.26 ATOM 639 CA ARG 43 4.034 21.259 10.551 1.00 9.26 ATOM 641 CB ARG 43 3.506 20.673 11.894 1.00 9.26 ATOM 644 CG ARG 43 4.536 19.715 12.533 1.00 9.26 ATOM 647 CD ARG 43 4.241 19.118 13.916 1.00 9.26 ATOM 650 NE ARG 43 4.193 20.222 14.929 1.00 9.26 ATOM 652 CZ ARG 43 4.054 19.982 16.261 1.00 9.26 ATOM 653 NH1 ARG 43 4.161 21.014 17.131 1.00 9.26 ATOM 656 NH2 ARG 43 3.844 18.737 16.755 1.00 9.26 ATOM 659 C ARG 43 3.834 20.473 9.293 1.00 9.26 ATOM 660 O ARG 43 2.850 19.763 9.082 1.00 9.26 ATOM 661 N SER 44 4.829 20.675 8.399 1.00 8.90 ATOM 663 CA SER 44 5.087 19.935 7.191 1.00 8.90 ATOM 665 CB SER 44 5.642 20.831 6.056 1.00 8.90 ATOM 668 OG SER 44 6.900 21.408 6.392 1.00 8.90 ATOM 670 C SER 44 6.016 18.796 7.548 1.00 8.90 ATOM 671 O SER 44 6.232 17.874 6.767 1.00 8.90 ATOM 672 N LYS 45 6.497 18.804 8.815 1.00 8.40 ATOM 674 CA LYS 45 6.980 17.655 9.544 1.00 8.40 ATOM 676 CB LYS 45 7.620 18.077 10.884 1.00 8.40 ATOM 679 CG LYS 45 8.897 18.907 10.713 1.00 8.40 ATOM 682 CD LYS 45 9.482 19.384 12.049 1.00 8.40 ATOM 685 CE LYS 45 10.748 20.237 11.885 1.00 8.40 ATOM 688 NZ LYS 45 11.219 20.717 13.200 1.00 8.40 ATOM 692 C LYS 45 5.819 16.730 9.837 1.00 8.40 ATOM 693 O LYS 45 6.019 15.528 9.994 1.00 8.40 TER END