####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS152_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 5 - 32 4.92 10.79 LONGEST_CONTINUOUS_SEGMENT: 28 8 - 35 4.99 11.36 LCS_AVERAGE: 56.30 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.93 16.62 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.96 17.94 LCS_AVERAGE: 17.92 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.79 16.16 LCS_AVERAGE: 11.73 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 6 12 3 4 5 5 5 5 6 7 8 8 8 9 10 12 13 16 18 20 22 23 LCS_GDT V 3 V 3 4 6 12 3 4 5 5 5 5 6 7 8 8 8 9 11 12 13 16 18 20 22 23 LCS_GDT Q 4 Q 4 4 6 23 3 4 5 5 5 6 7 10 10 11 17 22 25 28 29 31 32 34 35 37 LCS_GDT G 5 G 5 4 6 28 3 4 5 5 6 6 8 10 16 19 23 26 28 29 30 31 33 34 35 37 LCS_GDT P 6 P 6 3 6 28 3 3 4 5 6 7 8 14 17 19 23 26 28 29 30 31 33 34 35 37 LCS_GDT W 7 W 7 3 6 28 3 3 5 5 6 6 8 10 15 19 22 26 28 29 30 31 33 34 35 36 LCS_GDT V 8 V 8 4 7 28 0 3 5 6 9 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT G 9 G 9 4 7 28 3 3 5 6 8 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT S 10 S 10 5 7 28 4 4 5 6 7 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT S 11 S 11 5 7 28 4 4 5 6 9 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT Y 12 Y 12 5 7 28 4 4 5 6 7 8 11 12 13 17 22 26 28 29 30 31 33 34 35 37 LCS_GDT V 13 V 13 5 7 28 4 4 5 6 7 8 11 12 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT A 14 A 14 5 7 28 4 4 5 6 9 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT E 15 E 15 4 6 28 4 4 4 5 6 10 12 13 17 18 21 25 27 29 30 31 33 34 35 37 LCS_GDT T 16 T 16 4 6 28 4 4 5 6 9 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT G 17 G 17 4 6 28 4 4 5 6 9 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT Q 18 Q 18 4 6 28 3 4 5 6 9 10 12 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT N 19 N 19 4 11 28 3 3 6 7 8 11 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT W 20 W 20 9 11 28 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT A 21 A 21 9 11 28 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT S 22 S 22 9 11 28 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT L 23 L 23 9 11 28 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT A 24 A 24 9 11 28 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT A 25 A 25 9 11 28 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT N 26 N 26 9 11 28 5 8 10 10 11 12 13 15 16 19 22 26 28 29 30 31 33 34 35 37 LCS_GDT E 27 E 27 9 11 28 5 8 10 10 11 12 13 15 16 16 17 19 23 28 30 31 33 34 35 37 LCS_GDT L 28 L 28 9 11 28 5 5 10 10 11 12 13 15 16 16 19 20 24 28 30 31 33 34 35 37 LCS_GDT R 29 R 29 3 11 28 3 3 6 9 11 12 13 15 16 18 22 26 28 29 30 31 33 34 35 37 LCS_GDT V 30 V 30 3 11 28 3 3 5 7 8 11 13 15 17 19 22 26 28 29 30 31 33 34 35 37 LCS_GDT T 31 T 31 4 6 28 3 4 5 6 9 11 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT E 32 E 32 4 5 28 3 4 4 6 9 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT R 33 R 33 4 5 28 3 4 4 5 7 12 13 15 16 16 16 17 25 28 30 31 32 34 35 37 LCS_GDT P 34 P 34 4 5 28 1 4 10 10 11 12 13 15 16 16 18 25 27 28 30 31 33 34 35 37 LCS_GDT F 35 F 35 3 7 28 3 6 8 8 10 10 11 13 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT W 36 W 36 5 8 24 4 4 5 6 8 9 11 12 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT I 37 I 37 5 8 24 4 4 5 6 8 9 11 14 17 20 23 26 28 29 30 31 33 34 35 37 LCS_GDT S 38 S 38 5 8 21 4 4 5 6 8 9 10 11 13 16 19 21 24 27 28 31 33 34 35 37 LCS_GDT S 39 S 39 5 8 16 4 4 5 6 8 9 10 11 12 15 18 20 22 24 27 28 30 32 35 37 LCS_GDT F 40 F 40 5 8 15 4 4 5 6 8 9 10 11 12 13 14 18 22 24 27 28 30 32 35 37 LCS_GDT I 41 I 41 5 8 15 4 4 5 6 8 9 10 11 12 15 18 20 22 23 26 28 30 32 35 37 LCS_GDT G 42 G 42 4 8 15 3 4 5 6 8 9 10 11 12 13 14 15 16 20 22 23 25 25 26 28 LCS_GDT R 43 R 43 4 8 15 3 4 4 6 8 9 10 11 12 13 14 14 14 15 18 19 20 20 23 25 LCS_GDT S 44 S 44 4 7 15 3 4 5 6 7 9 10 11 12 13 14 14 14 15 18 18 19 20 21 22 LCS_GDT K 45 K 45 4 7 15 3 4 5 6 7 9 10 11 12 13 14 14 14 15 18 18 18 20 20 22 LCS_AVERAGE LCS_A: 28.65 ( 11.73 17.92 56.30 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 8 10 10 11 12 13 15 17 20 23 26 28 29 30 31 33 34 35 37 GDT PERCENT_AT 13.64 18.18 22.73 22.73 25.00 27.27 29.55 34.09 38.64 45.45 52.27 59.09 63.64 65.91 68.18 70.45 75.00 77.27 79.55 84.09 GDT RMS_LOCAL 0.24 0.60 1.02 1.02 1.36 1.73 2.04 2.50 3.27 3.79 4.14 4.41 4.60 4.74 4.94 5.05 5.38 5.53 5.69 6.34 GDT RMS_ALL_AT 14.76 15.68 17.11 17.11 16.98 17.37 17.99 17.69 10.81 10.31 10.19 10.28 10.39 10.39 10.50 10.46 10.41 10.43 10.28 9.86 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 37.865 0 0.623 0.608 39.646 0.000 0.000 - LGA V 3 V 3 32.765 0 0.037 0.932 34.659 0.000 0.000 31.899 LGA Q 4 Q 4 29.346 0 0.657 0.816 31.174 0.000 0.000 31.174 LGA G 5 G 5 27.584 0 0.537 0.537 31.695 0.000 0.000 - LGA P 6 P 6 26.567 0 0.665 0.601 31.204 0.000 0.000 30.496 LGA W 7 W 7 23.168 0 0.301 0.304 27.630 0.000 0.000 23.667 LGA V 8 V 8 18.895 0 0.652 0.872 19.868 0.000 0.000 17.221 LGA G 9 G 9 14.798 0 0.508 0.508 16.434 0.000 0.000 - LGA S 10 S 10 15.399 0 0.128 0.765 16.994 0.000 0.000 15.769 LGA S 11 S 11 18.929 0 0.034 0.034 21.822 0.000 0.000 21.822 LGA Y 12 Y 12 15.923 0 0.078 0.522 16.986 0.000 0.000 9.837 LGA V 13 V 13 14.031 0 0.608 0.666 16.452 0.000 0.000 12.406 LGA A 14 A 14 17.107 0 0.106 0.109 18.554 0.000 0.000 - LGA E 15 E 15 16.050 0 0.031 1.398 20.116 0.000 0.000 20.116 LGA T 16 T 16 12.625 0 0.165 0.277 13.580 0.000 0.000 10.938 LGA G 17 G 17 13.436 0 0.683 0.683 13.436 0.000 0.000 - LGA Q 18 Q 18 9.836 0 0.645 1.324 15.293 0.000 0.000 13.341 LGA N 19 N 19 4.029 0 0.034 0.175 6.931 18.636 11.591 5.977 LGA W 20 W 20 2.647 0 0.625 1.192 13.152 41.818 11.948 13.118 LGA A 21 A 21 1.052 0 0.062 0.060 1.698 73.636 69.091 - LGA S 22 S 22 1.781 0 0.031 0.629 2.754 62.273 56.970 1.381 LGA L 23 L 23 1.840 0 0.019 0.849 4.741 61.818 35.455 4.596 LGA A 24 A 24 1.799 0 0.017 0.020 2.292 51.364 48.727 - LGA A 25 A 25 1.886 0 0.030 0.030 2.555 48.636 49.091 - LGA N 26 N 26 1.709 0 0.058 0.819 3.351 51.364 48.864 3.351 LGA E 27 E 27 1.411 0 0.059 0.931 3.404 55.000 57.374 3.404 LGA L 28 L 28 1.625 0 0.618 1.154 3.391 46.364 47.727 2.971 LGA R 29 R 29 1.934 0 0.258 1.037 5.659 47.727 36.198 5.659 LGA V 30 V 30 3.869 0 0.643 0.901 7.193 8.636 7.532 7.193 LGA T 31 T 31 5.150 0 0.687 0.555 9.101 2.727 1.558 8.127 LGA E 32 E 32 3.022 0 0.631 1.104 5.068 27.727 21.616 2.755 LGA R 33 R 33 3.828 0 0.100 1.373 9.058 6.818 2.479 9.058 LGA P 34 P 34 2.441 0 0.137 0.392 6.323 14.545 20.779 2.265 LGA F 35 F 35 8.819 0 0.641 1.509 11.960 0.000 0.000 11.960 LGA W 36 W 36 13.165 0 0.651 1.117 15.104 0.000 0.000 9.375 LGA I 37 I 37 12.445 0 0.089 1.532 15.378 0.000 0.000 8.390 LGA S 38 S 38 16.193 0 0.107 0.623 19.964 0.000 0.000 16.840 LGA S 39 S 39 20.041 0 0.135 0.704 23.004 0.000 0.000 17.823 LGA F 40 F 40 21.609 0 0.060 0.877 25.113 0.000 0.000 21.293 LGA I 41 I 41 23.488 0 0.624 1.011 26.616 0.000 0.000 19.367 LGA G 42 G 42 28.427 0 0.695 0.695 29.442 0.000 0.000 - LGA R 43 R 43 29.272 0 0.086 1.157 29.618 0.000 0.000 22.976 LGA S 44 S 44 31.892 0 0.153 0.626 36.458 0.000 0.000 36.458 LGA K 45 K 45 30.056 0 0.441 0.808 31.810 0.000 0.000 30.130 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.495 9.486 10.691 14.070 11.977 5.610 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.50 36.364 32.431 0.577 LGA_LOCAL RMSD: 2.499 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 17.694 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.495 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.776616 * X + -0.172966 * Y + 0.605764 * Z + -37.341751 Y_new = -0.620761 * X + 0.046262 * Y + -0.782634 * Z + 16.944767 Z_new = 0.107345 * X + -0.983841 * Y + -0.143298 * Z + 14.727808 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.467269 -0.107553 -1.715431 [DEG: -141.3641 -6.1623 -98.2870 ] ZXZ: 0.658690 1.714589 3.032914 [DEG: 37.7401 98.2387 173.7732 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS152_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.50 32.431 9.49 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS152_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 -17.449 53.807 -5.958 1.00 15.00 N ATOM 14 CA ALA 2 -17.282 54.504 -4.671 1.00 15.00 C ATOM 15 CB ALA 2 -18.462 55.441 -4.421 1.00 15.00 C ATOM 16 C ALA 2 -17.138 53.513 -3.506 1.00 15.00 C ATOM 17 O ALA 2 -16.332 53.742 -2.597 1.00 15.00 O ATOM 18 N VAL 3 -17.922 52.425 -3.550 1.00 15.00 N ATOM 20 CA VAL 3 -17.927 51.361 -2.524 1.00 15.00 C ATOM 21 CB VAL 3 -19.392 50.949 -2.094 1.00 15.00 C ATOM 22 CG1 VAL 3 -19.980 52.012 -1.177 1.00 15.00 C ATOM 23 CG2 VAL 3 -20.318 50.744 -3.315 1.00 15.00 C ATOM 24 C VAL 3 -17.099 50.116 -2.915 1.00 15.00 C ATOM 25 O VAL 3 -17.111 49.702 -4.083 1.00 15.00 O ATOM 26 N GLN 4 -16.372 49.557 -1.936 1.00 15.00 N ATOM 28 CA GLN 4 -15.519 48.365 -2.112 1.00 15.00 C ATOM 29 CB GLN 4 -14.072 48.658 -1.680 1.00 15.00 C ATOM 30 CG GLN 4 -13.319 49.630 -2.582 1.00 15.00 C ATOM 31 CD GLN 4 -11.901 49.885 -2.109 1.00 15.00 C ATOM 32 OE1 GLN 4 -11.650 50.811 -1.337 1.00 15.00 O ATOM 33 NE2 GLN 4 -10.965 49.064 -2.571 1.00 15.00 N ATOM 36 C GLN 4 -16.063 47.172 -1.317 1.00 15.00 C ATOM 37 O GLN 4 -15.927 46.021 -1.749 1.00 15.00 O ATOM 38 N GLY 5 -16.680 47.465 -0.168 1.00 14.13 N ATOM 40 CA GLY 5 -17.242 46.434 0.696 1.00 14.13 C ATOM 41 C GLY 5 -17.965 47.006 1.915 1.00 14.13 C ATOM 42 O GLY 5 -19.159 46.719 2.049 1.00 14.13 O ATOM 43 N PRO 6 -17.308 47.790 2.829 1.00 11.41 N ATOM 44 CD PRO 6 -18.145 48.469 3.841 1.00 11.41 C ATOM 45 CA PRO 6 -15.914 48.278 2.952 1.00 11.41 C ATOM 46 CB PRO 6 -15.994 49.257 4.130 1.00 11.41 C ATOM 47 CG PRO 6 -17.390 49.755 4.072 1.00 11.41 C ATOM 48 C PRO 6 -14.847 47.191 3.209 1.00 11.41 C ATOM 49 O PRO 6 -15.102 46.231 3.949 1.00 11.41 O ATOM 50 N TRP 7 -13.667 47.365 2.587 1.00 11.69 N ATOM 52 CA TRP 7 -12.477 46.474 2.663 1.00 11.69 C ATOM 53 CB TRP 7 -11.691 46.677 3.987 1.00 11.69 C ATOM 54 CG TRP 7 -11.104 48.091 4.218 1.00 11.69 C ATOM 55 CD2 TRP 7 -9.822 48.595 3.778 1.00 11.69 C ATOM 56 CE2 TRP 7 -9.711 49.930 4.260 1.00 11.69 C ATOM 57 CE3 TRP 7 -8.755 48.051 3.025 1.00 11.69 C ATOM 58 CD1 TRP 7 -11.688 49.117 4.924 1.00 11.69 C ATOM 59 NE1 TRP 7 -10.860 50.213 4.950 1.00 11.69 N ATOM 61 CZ2 TRP 7 -8.574 50.738 4.016 1.00 11.69 C ATOM 62 CZ3 TRP 7 -7.615 48.859 2.778 1.00 11.69 C ATOM 63 CH2 TRP 7 -7.542 50.189 3.277 1.00 11.69 C ATOM 64 C TRP 7 -12.688 44.967 2.397 1.00 11.69 C ATOM 65 O TRP 7 -13.583 44.345 2.986 1.00 11.69 O ATOM 66 N VAL 8 -11.861 44.407 1.501 1.00 10.19 N ATOM 68 CA VAL 8 -11.896 42.983 1.109 1.00 10.19 C ATOM 69 CB VAL 8 -12.087 42.819 -0.473 1.00 10.19 C ATOM 70 CG1 VAL 8 -10.891 43.384 -1.269 1.00 10.19 C ATOM 71 CG2 VAL 8 -12.403 41.365 -0.862 1.00 10.19 C ATOM 72 C VAL 8 -10.651 42.243 1.655 1.00 10.19 C ATOM 73 O VAL 8 -9.554 42.814 1.696 1.00 10.19 O ATOM 74 N GLY 9 -10.852 40.991 2.078 1.00 9.52 N ATOM 76 CA GLY 9 -9.776 40.169 2.617 1.00 9.52 C ATOM 77 C GLY 9 -9.461 38.957 1.757 1.00 9.52 C ATOM 78 O GLY 9 -10.280 38.565 0.916 1.00 9.52 O ATOM 79 N SER 10 -8.270 38.371 1.974 1.00 8.84 N ATOM 81 CA SER 10 -7.723 37.181 1.270 1.00 8.84 C ATOM 82 CB SER 10 -8.571 35.916 1.550 1.00 8.84 C ATOM 83 OG SER 10 -7.944 34.738 1.068 1.00 8.84 O ATOM 85 C SER 10 -7.466 37.361 -0.248 1.00 8.84 C ATOM 86 O SER 10 -6.946 36.448 -0.908 1.00 8.84 O ATOM 87 N SER 11 -7.794 38.552 -0.772 1.00 8.39 N ATOM 89 CA SER 11 -7.628 38.921 -2.193 1.00 8.39 C ATOM 90 OG SER 11 -8.438 40.494 -3.889 1.00 8.39 O ATOM 92 C SER 11 -6.151 39.057 -2.624 1.00 8.39 C ATOM 93 O SER 11 -5.780 38.600 -3.711 1.00 8.39 O ATOM 94 CB SER 11 -8.394 40.219 -2.497 1.00 8.39 C ATOM 95 N TYR 12 -5.334 39.683 -1.762 1.00 8.75 N ATOM 97 CA TYR 12 -3.890 39.911 -1.986 1.00 8.75 C ATOM 98 CB TYR 12 -3.347 40.996 -1.013 1.00 8.75 C ATOM 99 CG TYR 12 -3.844 40.967 0.443 1.00 8.75 C ATOM 100 CD1 TYR 12 -5.022 41.658 0.828 1.00 8.75 C ATOM 101 CE1 TYR 12 -5.468 41.660 2.179 1.00 8.75 C ATOM 102 CD2 TYR 12 -3.125 40.279 1.449 1.00 8.75 C ATOM 103 CE2 TYR 12 -3.564 40.277 2.803 1.00 8.75 C ATOM 104 CZ TYR 12 -4.733 40.969 3.155 1.00 8.75 C ATOM 105 OH TYR 12 -5.159 40.968 4.465 1.00 8.75 O ATOM 107 C TYR 12 -3.002 38.647 -1.957 1.00 8.75 C ATOM 108 O TYR 12 -2.153 38.470 -2.840 1.00 8.75 O ATOM 109 N VAL 13 -3.208 37.790 -0.943 1.00 10.18 N ATOM 111 CA VAL 13 -2.469 36.521 -0.760 1.00 10.18 C ATOM 112 CB VAL 13 -1.568 36.512 0.556 1.00 10.18 C ATOM 113 CG1 VAL 13 -0.646 35.277 0.594 1.00 10.18 C ATOM 114 CG2 VAL 13 -0.712 37.774 0.637 1.00 10.18 C ATOM 115 C VAL 13 -3.521 35.387 -0.706 1.00 10.18 C ATOM 116 O VAL 13 -4.568 35.536 -0.062 1.00 10.18 O ATOM 117 N ALA 14 -3.235 34.284 -1.412 1.00 7.90 N ATOM 119 CA ALA 14 -4.111 33.102 -1.486 1.00 7.90 C ATOM 120 CB ALA 14 -4.573 32.872 -2.930 1.00 7.90 C ATOM 121 C ALA 14 -3.389 31.854 -0.956 1.00 7.90 C ATOM 122 O ALA 14 -4.041 30.876 -0.570 1.00 7.90 O ATOM 123 N GLU 15 -2.049 31.916 -0.925 1.00 6.82 N ATOM 125 CA GLU 15 -1.161 30.827 -0.462 1.00 6.82 C ATOM 126 CB GLU 15 0.294 31.109 -0.867 1.00 6.82 C ATOM 127 CG GLU 15 0.567 31.025 -2.367 1.00 6.82 C ATOM 128 CD GLU 15 2.016 31.312 -2.715 1.00 6.82 C ATOM 129 OE1 GLU 15 2.349 32.492 -2.957 1.00 6.82 O ATOM 130 OE2 GLU 15 2.821 30.358 -2.750 1.00 6.82 O ATOM 131 C GLU 15 -1.222 30.515 1.047 1.00 6.82 C ATOM 132 O GLU 15 -1.142 29.343 1.435 1.00 6.82 O ATOM 133 N THR 16 -1.369 31.562 1.874 1.00 6.73 N ATOM 135 CA THR 16 -1.438 31.453 3.350 1.00 6.73 C ATOM 136 CB THR 16 -1.242 32.840 4.037 1.00 6.73 C ATOM 137 OG1 THR 16 -2.137 33.798 3.458 1.00 6.73 O ATOM 139 CG2 THR 16 0.196 33.324 3.884 1.00 6.73 C ATOM 140 C THR 16 -2.705 30.771 3.908 1.00 6.73 C ATOM 141 O THR 16 -2.600 29.873 4.751 1.00 6.73 O ATOM 142 N GLY 17 -3.880 31.173 3.403 1.00 6.71 N ATOM 144 CA GLY 17 -5.156 30.607 3.839 1.00 6.71 C ATOM 145 C GLY 17 -5.777 31.226 5.086 1.00 6.71 C ATOM 146 O GLY 17 -5.187 32.128 5.692 1.00 6.71 O ATOM 147 N GLN 18 -6.967 30.729 5.453 1.00 6.04 N ATOM 149 CA GLN 18 -7.752 31.168 6.626 1.00 6.04 C ATOM 150 CB GLN 18 -9.181 30.613 6.555 1.00 6.04 C ATOM 151 CG GLN 18 -10.039 31.190 5.434 1.00 6.04 C ATOM 152 CD GLN 18 -11.437 30.601 5.407 1.00 6.04 C ATOM 153 OE1 GLN 18 -11.687 29.600 4.736 1.00 6.04 O ATOM 154 NE2 GLN 18 -12.356 31.221 6.140 1.00 6.04 N ATOM 157 C GLN 18 -7.122 30.790 7.979 1.00 6.04 C ATOM 158 O GLN 18 -7.184 31.576 8.935 1.00 6.04 O ATOM 159 N ASN 19 -6.506 29.599 8.033 1.00 5.49 N ATOM 161 CA ASN 19 -5.844 29.049 9.235 1.00 5.49 C ATOM 162 CB ASN 19 -5.457 27.577 9.015 1.00 5.49 C ATOM 163 CG ASN 19 -6.666 26.662 8.853 1.00 5.49 C ATOM 164 OD1 ASN 19 -7.142 26.434 7.738 1.00 5.49 O ATOM 165 ND2 ASN 19 -7.157 26.121 9.964 1.00 5.49 N ATOM 168 C ASN 19 -4.604 29.859 9.649 1.00 5.49 C ATOM 169 O ASN 19 -4.376 30.072 10.844 1.00 5.49 O ATOM 170 N TRP 20 -3.839 30.328 8.651 1.00 5.83 N ATOM 172 CA TRP 20 -2.619 31.138 8.849 1.00 5.83 C ATOM 173 CB TRP 20 -1.834 31.260 7.521 1.00 5.83 C ATOM 174 CG TRP 20 -0.322 31.613 7.628 1.00 5.83 C ATOM 175 CD2 TRP 20 0.786 30.699 7.793 1.00 5.83 C ATOM 176 CE2 TRP 20 1.976 31.481 7.802 1.00 5.83 C ATOM 177 CE3 TRP 20 0.893 29.295 7.935 1.00 5.83 C ATOM 178 CD1 TRP 20 0.237 32.867 7.548 1.00 5.83 C ATOM 179 NE1 TRP 20 1.604 32.792 7.650 1.00 5.83 N ATOM 181 CZ2 TRP 20 3.264 30.911 7.947 1.00 5.83 C ATOM 182 CZ3 TRP 20 2.181 28.722 8.080 1.00 5.83 C ATOM 183 CH2 TRP 20 3.348 29.537 8.084 1.00 5.83 C ATOM 184 C TRP 20 -2.981 32.535 9.399 1.00 5.83 C ATOM 185 O TRP 20 -2.261 33.067 10.249 1.00 5.83 O ATOM 186 N ALA 21 -4.105 33.090 8.918 1.00 5.72 N ATOM 188 CA ALA 21 -4.633 34.409 9.328 1.00 5.72 C ATOM 189 CB ALA 21 -5.761 34.846 8.386 1.00 5.72 C ATOM 190 C ALA 21 -5.130 34.397 10.785 1.00 5.72 C ATOM 191 O ALA 21 -4.830 35.320 11.554 1.00 5.72 O ATOM 192 N SER 22 -5.854 33.326 11.150 1.00 5.36 N ATOM 194 CA SER 22 -6.413 33.113 12.500 1.00 5.36 C ATOM 195 CB SER 22 -7.411 31.949 12.489 1.00 5.36 C ATOM 196 OG SER 22 -8.485 32.209 11.602 1.00 5.36 O ATOM 198 C SER 22 -5.316 32.859 13.553 1.00 5.36 C ATOM 199 O SER 22 -5.358 33.444 14.642 1.00 5.36 O ATOM 200 N LEU 23 -4.334 32.014 13.200 1.00 5.44 N ATOM 202 CA LEU 23 -3.188 31.661 14.063 1.00 5.44 C ATOM 203 CB LEU 23 -2.427 30.433 13.498 1.00 5.44 C ATOM 204 CG LEU 23 -2.671 28.914 13.744 1.00 5.44 C ATOM 205 CD1 LEU 23 -2.189 28.472 15.136 1.00 5.44 C ATOM 206 CD2 LEU 23 -4.115 28.444 13.485 1.00 5.44 C ATOM 207 C LEU 23 -2.219 32.835 14.287 1.00 5.44 C ATOM 208 O LEU 23 -1.680 32.988 15.388 1.00 5.44 O ATOM 209 N ALA 24 -2.011 33.647 13.238 1.00 5.42 N ATOM 211 CA ALA 24 -1.137 34.839 13.263 1.00 5.42 C ATOM 212 CB ALA 24 -0.892 35.347 11.844 1.00 5.42 C ATOM 213 C ALA 24 -1.723 35.962 14.137 1.00 5.42 C ATOM 214 O ALA 24 -0.985 36.614 14.885 1.00 5.42 O ATOM 215 N ALA 25 -3.042 36.174 14.022 1.00 5.54 N ATOM 217 CA ALA 25 -3.796 37.192 14.782 1.00 5.54 C ATOM 218 CB ALA 25 -5.180 37.386 14.165 1.00 5.54 C ATOM 219 C ALA 25 -3.922 36.880 16.288 1.00 5.54 C ATOM 220 O ALA 25 -3.700 37.763 17.123 1.00 5.54 O ATOM 221 N ASN 26 -4.281 35.627 16.607 1.00 5.77 N ATOM 223 CA ASN 26 -4.456 35.122 17.986 1.00 5.77 C ATOM 224 CB ASN 26 -5.253 33.808 17.977 1.00 5.77 C ATOM 225 CG ASN 26 -6.733 34.017 17.676 1.00 5.77 C ATOM 226 OD1 ASN 26 -7.156 33.987 16.519 1.00 5.77 O ATOM 227 ND2 ASN 26 -7.529 34.211 18.724 1.00 5.77 N ATOM 230 C ASN 26 -3.184 34.952 18.842 1.00 5.77 C ATOM 231 O ASN 26 -3.215 35.226 20.048 1.00 5.77 O ATOM 232 N GLU 27 -2.084 34.516 18.210 1.00 5.73 N ATOM 234 CA GLU 27 -0.785 34.270 18.875 1.00 5.73 C ATOM 235 CG GLU 27 -0.614 31.768 18.270 1.00 5.73 C ATOM 236 CD GLU 27 0.210 30.709 17.560 1.00 5.73 C ATOM 237 OE1 GLU 27 1.095 30.109 18.207 1.00 5.73 O ATOM 238 OE2 GLU 27 -0.027 30.476 16.356 1.00 5.73 O ATOM 239 C GLU 27 0.128 35.495 19.062 1.00 5.73 C ATOM 240 O GLU 27 0.819 35.596 20.085 1.00 5.73 O ATOM 241 CB GLU 27 -0.009 33.164 18.147 1.00 5.73 C ATOM 242 N LEU 28 0.116 36.415 18.087 1.00 5.75 N ATOM 244 CA LEU 28 0.937 37.641 18.104 1.00 5.75 C ATOM 245 CB LEU 28 1.345 38.036 16.661 1.00 5.75 C ATOM 246 CG LEU 28 2.350 37.347 15.690 1.00 5.75 C ATOM 247 CD1 LEU 28 3.811 37.533 16.131 1.00 5.75 C ATOM 248 CD2 LEU 28 2.038 35.864 15.411 1.00 5.75 C ATOM 249 C LEU 28 0.279 38.839 18.813 1.00 5.75 C ATOM 250 O LEU 28 -0.950 38.985 18.774 1.00 5.75 O ATOM 251 N ARG 29 1.112 39.675 19.449 1.00 7.03 N ATOM 253 CA ARG 29 0.686 40.876 20.195 1.00 7.03 C ATOM 254 CB ARG 29 1.511 41.027 21.483 1.00 7.03 C ATOM 255 CG ARG 29 1.235 39.965 22.551 1.00 7.03 C ATOM 256 CD ARG 29 2.068 40.183 23.813 1.00 7.03 C ATOM 257 NE ARG 29 3.498 39.929 23.605 1.00 7.03 N ATOM 259 CZ ARG 29 4.445 40.071 24.531 1.00 7.03 C ATOM 260 NH1 ARG 29 5.708 39.810 24.221 1.00 7.03 N ATOM 263 NH2 ARG 29 4.149 40.471 25.765 1.00 7.03 N ATOM 266 C ARG 29 0.795 42.158 19.348 1.00 7.03 C ATOM 267 O ARG 29 0.160 43.173 19.669 1.00 7.03 O ATOM 268 N VAL 30 1.571 42.082 18.256 1.00 6.86 N ATOM 270 CA VAL 30 1.798 43.203 17.316 1.00 6.86 C ATOM 271 CB VAL 30 3.216 43.124 16.623 1.00 6.86 C ATOM 272 CG1 VAL 30 4.296 43.551 17.606 1.00 6.86 C ATOM 273 CG2 VAL 30 3.524 41.704 16.094 1.00 6.86 C ATOM 274 C VAL 30 0.674 43.361 16.264 1.00 6.86 C ATOM 275 O VAL 30 0.295 44.490 15.923 1.00 6.86 O ATOM 276 N THR 31 0.150 42.222 15.785 1.00 8.25 N ATOM 278 CA THR 31 -0.939 42.157 14.791 1.00 8.25 C ATOM 279 CB THR 31 -0.574 41.233 13.582 1.00 8.25 C ATOM 280 OG1 THR 31 -0.087 39.973 14.063 1.00 8.25 O ATOM 282 CG2 THR 31 0.486 41.887 12.703 1.00 8.25 C ATOM 283 C THR 31 -2.237 41.659 15.455 1.00 8.25 C ATOM 284 O THR 31 -2.192 40.771 16.319 1.00 8.25 O ATOM 285 N GLU 32 -3.371 42.264 15.073 1.00 7.68 N ATOM 287 CA GLU 32 -4.706 41.921 15.604 1.00 7.68 C ATOM 288 CB GLU 32 -5.423 43.172 16.137 1.00 7.68 C ATOM 289 CG GLU 32 -4.806 43.775 17.398 1.00 7.68 C ATOM 290 CD GLU 32 -5.550 45.006 17.882 1.00 7.68 C ATOM 291 OE1 GLU 32 -6.487 44.856 18.693 1.00 7.68 O ATOM 292 OE2 GLU 32 -5.193 46.124 17.454 1.00 7.68 O ATOM 293 C GLU 32 -5.582 41.232 14.549 1.00 7.68 C ATOM 294 O GLU 32 -6.301 40.281 14.874 1.00 7.68 O ATOM 295 N ARG 33 -5.490 41.711 13.294 1.00 7.65 N ATOM 297 CA ARG 33 -6.234 41.228 12.096 1.00 7.65 C ATOM 298 CB ARG 33 -5.593 39.960 11.487 1.00 7.65 C ATOM 299 CG ARG 33 -4.186 40.174 10.921 1.00 7.65 C ATOM 300 CD ARG 33 -3.640 38.930 10.227 1.00 7.65 C ATOM 301 NE ARG 33 -4.296 38.667 8.943 1.00 7.65 N ATOM 303 CZ ARG 33 -3.823 37.864 7.988 1.00 7.65 C ATOM 304 NH1 ARG 33 -4.512 37.708 6.866 1.00 7.65 N ATOM 307 NH2 ARG 33 -2.671 37.217 8.140 1.00 7.65 N ATOM 310 C ARG 33 -7.773 41.049 12.250 1.00 7.65 C ATOM 311 O ARG 33 -8.214 40.286 13.121 1.00 7.65 O ATOM 312 N PRO 34 -8.603 41.757 11.420 1.00 6.46 N ATOM 313 CD PRO 34 -8.226 42.847 10.489 1.00 6.46 C ATOM 314 CA PRO 34 -10.078 41.651 11.495 1.00 6.46 C ATOM 315 CB PRO 34 -10.555 42.767 10.552 1.00 6.46 C ATOM 316 CG PRO 34 -9.414 42.940 9.583 1.00 6.46 C ATOM 317 C PRO 34 -10.748 40.286 11.181 1.00 6.46 C ATOM 318 O PRO 34 -10.363 39.602 10.226 1.00 6.46 O ATOM 319 N PHE 35 -11.689 39.889 12.050 1.00 8.41 N ATOM 321 CA PHE 35 -12.482 38.647 11.959 1.00 8.41 C ATOM 322 CB PHE 35 -13.144 38.311 13.329 1.00 8.41 C ATOM 323 CG PHE 35 -13.887 39.476 14.001 1.00 8.41 C ATOM 324 CD1 PHE 35 -15.266 39.692 13.758 1.00 8.41 C ATOM 325 CD2 PHE 35 -13.220 40.336 14.905 1.00 8.41 C ATOM 326 CE1 PHE 35 -15.969 40.745 14.405 1.00 8.41 C ATOM 327 CE2 PHE 35 -13.910 41.394 15.559 1.00 8.41 C ATOM 328 CZ PHE 35 -15.289 41.598 15.308 1.00 8.41 C ATOM 329 C PHE 35 -13.527 38.628 10.825 1.00 8.41 C ATOM 330 O PHE 35 -13.762 37.579 10.212 1.00 8.41 O ATOM 331 N TRP 36 -14.133 39.798 10.564 1.00 6.70 N ATOM 333 CA TRP 36 -15.174 39.995 9.534 1.00 6.70 C ATOM 334 CB TRP 36 -15.795 41.413 9.631 1.00 6.70 C ATOM 335 CG TRP 36 -14.824 42.624 9.721 1.00 6.70 C ATOM 336 CD2 TRP 36 -14.433 43.513 8.653 1.00 6.70 C ATOM 337 CE2 TRP 36 -13.575 44.498 9.223 1.00 6.70 C ATOM 338 CE3 TRP 36 -14.721 43.578 7.270 1.00 6.70 C ATOM 339 CD1 TRP 36 -14.201 43.099 10.854 1.00 6.70 C ATOM 340 NE1 TRP 36 -13.457 44.215 10.558 1.00 6.70 N ATOM 342 CZ2 TRP 36 -13.000 45.542 8.459 1.00 6.70 C ATOM 343 CZ3 TRP 36 -14.147 44.623 6.503 1.00 6.70 C ATOM 344 CH2 TRP 36 -13.295 45.589 7.109 1.00 6.70 C ATOM 345 C TRP 36 -14.771 39.654 8.086 1.00 6.70 C ATOM 346 O TRP 36 -15.593 39.113 7.339 1.00 6.70 O ATOM 347 N ILE 37 -13.518 39.955 7.710 1.00 7.54 N ATOM 349 CA ILE 37 -12.976 39.653 6.363 1.00 7.54 C ATOM 350 CB ILE 37 -11.626 40.415 6.043 1.00 7.54 C ATOM 351 CG2 ILE 37 -11.935 41.882 5.717 1.00 7.54 C ATOM 352 CG1 ILE 37 -10.595 40.288 7.186 1.00 7.54 C ATOM 353 CD1 ILE 37 -9.134 40.161 6.733 1.00 7.54 C ATOM 354 C ILE 37 -12.823 38.129 6.152 1.00 7.54 C ATOM 355 O ILE 37 -13.148 37.609 5.076 1.00 7.54 O ATOM 356 N SER 38 -12.382 37.440 7.219 1.00 6.45 N ATOM 358 CA SER 38 -12.180 35.977 7.253 1.00 6.45 C ATOM 359 CB SER 38 -11.428 35.571 8.530 1.00 6.45 C ATOM 360 OG SER 38 -11.057 34.201 8.509 1.00 6.45 O ATOM 362 C SER 38 -13.540 35.255 7.174 1.00 6.45 C ATOM 363 O SER 38 -13.664 34.236 6.484 1.00 6.45 O ATOM 364 N SER 39 -14.532 35.795 7.898 1.00 6.00 N ATOM 366 CA SER 39 -15.918 35.285 7.945 1.00 6.00 C ATOM 367 CB SER 39 -16.681 35.922 9.111 1.00 6.00 C ATOM 368 OG SER 39 -16.061 35.627 10.351 1.00 6.00 O ATOM 370 C SER 39 -16.688 35.514 6.629 1.00 6.00 C ATOM 371 O SER 39 -17.482 34.660 6.218 1.00 6.00 O ATOM 372 N PHE 40 -16.442 36.672 5.993 1.00 6.48 N ATOM 374 CA PHE 40 -17.072 37.094 4.722 1.00 6.48 C ATOM 375 CB PHE 40 -16.820 38.608 4.476 1.00 6.48 C ATOM 376 CG PHE 40 -17.915 39.326 3.675 1.00 6.48 C ATOM 377 CD1 PHE 40 -19.005 39.945 4.333 1.00 6.48 C ATOM 378 CD2 PHE 40 -17.839 39.416 2.265 1.00 6.48 C ATOM 379 CE1 PHE 40 -20.005 40.644 3.601 1.00 6.48 C ATOM 380 CE2 PHE 40 -18.831 40.112 1.518 1.00 6.48 C ATOM 381 CZ PHE 40 -19.916 40.727 2.189 1.00 6.48 C ATOM 382 C PHE 40 -16.632 36.276 3.489 1.00 6.48 C ATOM 383 O PHE 40 -17.470 35.953 2.640 1.00 6.48 O ATOM 384 N ILE 41 -15.332 35.951 3.405 1.00 6.99 N ATOM 386 CA ILE 41 -14.749 35.177 2.283 1.00 6.99 C ATOM 387 CB ILE 41 -13.170 35.298 2.208 1.00 6.99 C ATOM 388 CG2 ILE 41 -12.784 36.715 1.759 1.00 6.99 C ATOM 389 CG1 ILE 41 -12.493 34.917 3.542 1.00 6.99 C ATOM 390 CD1 ILE 41 -11.226 34.071 3.400 1.00 6.99 C ATOM 391 C ILE 41 -15.195 33.700 2.187 1.00 6.99 C ATOM 392 O ILE 41 -15.406 33.187 1.082 1.00 6.99 O ATOM 393 N GLY 42 -15.356 33.054 3.344 1.00 6.50 N ATOM 395 CA GLY 42 -15.772 31.658 3.396 1.00 6.50 C ATOM 396 C GLY 42 -16.761 31.375 4.513 1.00 6.50 C ATOM 397 O GLY 42 -16.849 32.152 5.470 1.00 6.50 O ATOM 398 N ARG 43 -17.472 30.241 4.395 1.00 6.69 N ATOM 400 CA ARG 43 -18.507 29.718 5.331 1.00 6.69 C ATOM 401 CB ARG 43 -17.899 28.774 6.413 1.00 6.69 C ATOM 402 CG ARG 43 -16.791 29.338 7.327 1.00 6.69 C ATOM 403 CD ARG 43 -16.315 28.292 8.323 1.00 6.69 C ATOM 404 NE ARG 43 -15.266 28.807 9.207 1.00 6.69 N ATOM 406 CZ ARG 43 -14.681 28.118 10.188 1.00 6.69 C ATOM 407 NH1 ARG 43 -15.024 26.859 10.444 1.00 6.69 N ATOM 410 NH2 ARG 43 -13.742 28.698 10.922 1.00 6.69 N ATOM 413 C ARG 43 -19.574 30.671 5.941 1.00 6.69 C ATOM 414 O ARG 43 -19.360 31.887 6.015 1.00 6.69 O ATOM 415 N SER 44 -20.710 30.092 6.360 1.00 7.92 N ATOM 417 CA SER 44 -21.846 30.812 6.968 1.00 7.92 C ATOM 418 CB SER 44 -23.166 30.170 6.505 1.00 7.92 C ATOM 419 OG SER 44 -24.293 30.924 6.925 1.00 7.92 O ATOM 421 C SER 44 -21.736 30.806 8.510 1.00 7.92 C ATOM 422 O SER 44 -20.718 30.349 9.047 1.00 7.92 O ATOM 423 N LYS 45 -22.771 31.308 9.203 1.00 7.60 N ATOM 425 CA LYS 45 -22.822 31.383 10.679 1.00 7.60 C ATOM 426 CG LYS 45 -23.326 33.910 10.827 1.00 7.60 C ATOM 427 CD LYS 45 -24.338 34.939 11.300 1.00 7.60 C ATOM 428 CE LYS 45 -23.874 36.353 10.987 1.00 7.60 C ATOM 429 NZ LYS 45 -24.857 37.376 11.439 1.00 7.60 N ATOM 433 C LYS 45 -23.147 30.034 11.362 1.00 7.60 C ATOM 434 O LYS 45 -22.221 29.277 11.669 1.00 7.60 O ATOM 435 CB LYS 45 -23.791 32.490 11.134 1.00 7.60 C TER END