####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS152_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 4 - 23 4.95 10.19 LCS_AVERAGE: 41.22 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.94 14.23 LCS_AVERAGE: 16.01 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.32 13.50 LCS_AVERAGE: 11.36 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 4 13 3 3 4 4 4 7 8 10 11 12 12 15 18 20 22 24 30 33 37 38 LCS_GDT V 3 V 3 4 6 16 3 3 4 4 4 7 9 10 11 12 12 19 20 23 24 31 32 35 37 38 LCS_GDT Q 4 Q 4 5 6 20 3 4 5 6 8 11 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT G 5 G 5 5 6 20 0 4 5 6 8 11 13 15 15 19 21 23 25 27 32 34 35 36 37 38 LCS_GDT P 6 P 6 5 6 20 2 4 5 6 8 11 13 15 15 19 21 23 25 27 32 34 35 36 37 38 LCS_GDT W 7 W 7 5 6 20 2 4 5 6 8 11 13 15 15 19 21 23 25 27 32 34 35 36 37 38 LCS_GDT V 8 V 8 5 6 20 0 3 5 6 8 11 13 15 15 19 21 23 25 28 32 34 35 36 37 38 LCS_GDT G 9 G 9 5 6 20 3 4 5 6 8 11 13 15 15 17 21 23 24 27 32 34 35 36 37 38 LCS_GDT S 10 S 10 5 6 20 3 4 5 5 7 11 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT S 11 S 11 5 6 20 3 4 5 5 5 6 8 10 14 17 19 23 26 28 32 34 35 36 37 38 LCS_GDT Y 12 Y 12 5 6 20 3 4 5 5 7 8 10 15 15 17 18 20 24 26 31 34 35 36 37 38 LCS_GDT V 13 V 13 5 6 20 3 4 5 5 7 11 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT A 14 A 14 4 5 20 3 4 4 6 7 8 11 13 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT E 15 E 15 4 5 20 3 4 4 6 7 9 11 12 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT T 16 T 16 4 5 20 3 4 4 6 7 9 11 13 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT G 17 G 17 4 5 20 3 4 4 6 7 8 11 13 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT Q 18 Q 18 4 5 20 3 3 4 6 7 8 11 13 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT N 19 N 19 4 10 20 3 3 4 4 7 9 12 12 15 17 20 23 26 28 32 34 35 36 37 38 LCS_GDT W 20 W 20 8 10 20 8 9 9 11 11 12 12 12 14 17 20 21 26 28 32 34 35 36 37 38 LCS_GDT A 21 A 21 8 10 20 8 9 9 11 11 12 12 12 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT S 22 S 22 8 10 20 8 9 9 11 11 12 12 12 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT L 23 L 23 8 10 20 8 9 9 11 11 12 12 12 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT A 24 A 24 8 10 18 8 9 9 11 11 12 12 12 15 17 20 23 26 28 32 34 35 36 37 38 LCS_GDT A 25 A 25 8 10 18 8 9 9 11 11 12 12 12 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT N 26 N 26 8 10 18 8 9 9 11 11 12 12 12 14 17 18 23 25 28 32 34 35 36 37 38 LCS_GDT E 27 E 27 8 10 18 8 9 9 11 11 12 12 12 14 15 15 18 19 23 24 29 32 36 36 37 LCS_GDT L 28 L 28 5 10 18 1 4 6 9 10 12 12 12 14 17 18 19 25 27 32 34 35 36 37 38 LCS_GDT R 29 R 29 5 6 18 3 4 5 6 7 9 12 13 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT V 30 V 30 5 6 18 3 4 5 6 6 10 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT T 31 T 31 5 6 18 3 4 5 6 6 9 13 15 15 17 18 19 24 25 30 31 35 36 37 38 LCS_GDT E 32 E 32 3 5 18 3 3 3 5 6 7 9 11 13 15 18 19 20 23 24 31 32 33 37 38 LCS_GDT R 33 R 33 3 5 18 3 3 4 5 6 9 9 15 15 17 18 19 21 26 30 34 35 36 37 38 LCS_GDT P 34 P 34 3 5 18 2 3 4 6 7 10 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT F 35 F 35 3 7 18 3 9 9 11 11 12 12 13 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT W 36 W 36 5 8 18 4 4 6 11 11 12 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT I 37 I 37 5 8 15 4 4 6 11 11 12 13 15 15 19 21 23 26 28 32 34 35 36 37 38 LCS_GDT S 38 S 38 5 8 15 4 4 6 8 8 9 11 12 15 17 20 22 26 28 32 34 35 36 37 38 LCS_GDT S 39 S 39 5 8 15 4 4 6 8 8 8 9 12 15 17 20 22 26 28 30 34 35 36 37 38 LCS_GDT F 40 F 40 5 8 15 4 4 6 8 8 9 10 12 13 17 20 22 26 28 32 34 35 36 37 38 LCS_GDT I 41 I 41 5 8 15 4 4 6 8 8 9 11 12 15 17 20 22 26 28 32 34 35 36 37 38 LCS_GDT G 42 G 42 3 8 15 3 3 5 8 8 9 10 12 13 16 19 21 23 23 24 27 28 31 33 35 LCS_GDT R 43 R 43 3 8 15 3 3 5 8 8 9 10 12 13 14 15 15 19 19 22 24 24 28 28 32 LCS_GDT S 44 S 44 3 6 15 3 3 3 5 6 9 10 12 13 14 15 15 16 17 18 18 21 21 21 26 LCS_GDT K 45 K 45 3 5 15 3 3 3 5 6 9 10 12 13 14 15 15 16 17 17 17 17 18 19 21 LCS_AVERAGE LCS_A: 22.87 ( 11.36 16.01 41.22 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 9 11 11 12 13 15 15 19 21 23 26 28 32 34 35 36 37 38 GDT PERCENT_AT 18.18 20.45 20.45 25.00 25.00 27.27 29.55 34.09 34.09 43.18 47.73 52.27 59.09 63.64 72.73 77.27 79.55 81.82 84.09 86.36 GDT RMS_LOCAL 0.32 0.50 0.50 0.95 0.95 1.28 2.51 2.76 2.76 3.81 4.01 4.26 4.77 4.99 5.41 5.62 5.73 5.87 6.03 6.19 GDT RMS_ALL_AT 13.50 13.71 13.71 13.71 13.71 13.37 10.20 10.36 10.36 9.21 9.24 9.26 8.79 8.77 9.04 8.99 8.91 8.89 8.84 8.83 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.758 0 0.051 0.068 12.760 0.000 0.000 - LGA V 3 V 3 7.158 0 0.048 0.134 11.694 0.455 0.260 8.354 LGA Q 4 Q 4 0.934 0 0.690 0.896 5.701 57.273 36.566 5.701 LGA G 5 G 5 2.188 0 0.394 0.394 4.255 38.182 38.182 - LGA P 6 P 6 2.332 0 0.081 0.436 4.497 35.455 26.494 4.497 LGA W 7 W 7 2.301 0 0.351 0.894 4.759 38.636 35.195 4.759 LGA V 8 V 8 1.564 0 0.651 0.868 4.491 40.000 32.468 4.313 LGA G 9 G 9 2.098 0 0.468 0.468 2.098 62.727 62.727 - LGA S 10 S 10 3.279 0 0.098 0.144 5.777 20.455 13.636 5.777 LGA S 11 S 11 5.620 0 0.065 0.060 8.316 1.364 0.909 8.316 LGA Y 12 Y 12 3.752 0 0.057 0.394 5.413 17.727 11.212 5.413 LGA V 13 V 13 2.975 0 0.565 0.880 5.275 15.455 9.870 4.521 LGA A 14 A 14 8.824 0 0.601 0.573 10.946 0.000 0.000 - LGA E 15 E 15 9.855 0 0.050 1.358 10.710 0.000 0.000 7.603 LGA T 16 T 16 8.962 0 0.157 0.277 9.880 0.000 0.000 7.654 LGA G 17 G 17 10.934 0 0.680 0.680 11.722 0.000 0.000 - LGA Q 18 Q 18 10.945 0 0.655 1.338 13.484 0.000 0.000 9.746 LGA N 19 N 19 14.692 0 0.073 1.088 19.769 0.000 0.000 18.973 LGA W 20 W 20 12.096 0 0.632 0.520 20.069 0.000 0.000 20.069 LGA A 21 A 21 8.604 0 0.036 0.034 9.769 0.000 0.000 - LGA S 22 S 22 7.683 0 0.021 0.050 9.624 0.000 0.000 7.845 LGA L 23 L 23 11.796 0 0.014 0.333 13.505 0.000 0.000 12.643 LGA A 24 A 24 12.409 0 0.019 0.023 12.529 0.000 0.000 - LGA A 25 A 25 10.136 0 0.026 0.026 12.395 0.000 0.000 - LGA N 26 N 26 13.777 0 0.050 1.190 16.481 0.000 0.000 10.818 LGA E 27 E 27 17.160 0 0.341 1.007 21.004 0.000 0.000 18.098 LGA L 28 L 28 13.366 0 0.595 0.542 17.640 0.000 0.000 17.511 LGA R 29 R 29 7.925 0 0.352 1.444 17.593 0.455 0.165 15.624 LGA V 30 V 30 2.948 0 0.620 0.487 7.180 19.091 10.909 6.947 LGA T 31 T 31 3.586 0 0.677 0.852 5.398 16.818 10.649 4.814 LGA E 32 E 32 6.087 0 0.135 1.128 12.578 10.909 4.848 12.578 LGA R 33 R 33 3.851 0 0.127 1.174 7.985 4.091 7.603 6.417 LGA P 34 P 34 1.093 0 0.113 0.234 4.261 35.455 28.052 3.786 LGA F 35 F 35 5.038 0 0.652 0.675 12.317 8.636 3.140 12.317 LGA W 36 W 36 3.305 0 0.607 1.161 6.062 12.273 18.052 6.062 LGA I 37 I 37 3.002 0 0.079 1.177 8.365 13.182 6.818 8.365 LGA S 38 S 38 8.769 0 0.106 0.646 11.205 0.000 0.000 10.634 LGA S 39 S 39 11.065 0 0.159 0.260 13.052 0.000 0.000 10.015 LGA F 40 F 40 9.279 0 0.053 0.603 12.659 0.000 0.000 12.659 LGA I 41 I 41 9.653 0 0.622 1.049 12.977 0.000 0.000 11.623 LGA G 42 G 42 16.770 0 0.651 0.651 19.061 0.000 0.000 - LGA R 43 R 43 19.001 0 0.676 1.248 21.906 0.000 0.000 21.436 LGA S 44 S 44 22.910 0 0.072 0.598 25.464 0.000 0.000 25.464 LGA K 45 K 45 26.347 0 0.087 0.872 29.723 0.000 0.000 28.048 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.528 8.542 9.668 10.196 8.131 0.779 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.76 39.205 31.525 0.524 LGA_LOCAL RMSD: 2.762 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.365 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.528 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.700984 * X + 0.107137 * Y + -0.705084 * Z + -25.483856 Y_new = -0.100426 * X + -0.993629 * Y + -0.051139 * Z + 33.417843 Z_new = -0.706071 * X + 0.034961 * Y + 0.707277 * Z + -16.357317 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.999297 0.783935 0.049390 [DEG: -171.8470 44.9162 2.8298 ] ZXZ: -1.498394 0.785157 -1.521322 [DEG: -85.8517 44.9862 -87.1653 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS152_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS152_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.76 31.525 8.53 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS152_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 11.293 30.175 4.325 1.00 13.17 N ATOM 14 CA ALA 2 12.308 31.214 4.074 1.00 13.17 C ATOM 15 CB ALA 2 13.054 30.921 2.775 1.00 13.17 C ATOM 16 C ALA 2 11.679 32.613 4.018 1.00 13.17 C ATOM 17 O ALA 2 10.552 32.765 3.534 1.00 13.17 O ATOM 18 N VAL 3 12.432 33.622 4.495 1.00 11.12 N ATOM 20 CA VAL 3 12.067 35.072 4.563 1.00 11.12 C ATOM 21 CB VAL 3 12.093 35.800 3.137 1.00 11.12 C ATOM 22 CG1 VAL 3 12.177 37.330 3.290 1.00 11.12 C ATOM 23 CG2 VAL 3 13.273 35.311 2.294 1.00 11.12 C ATOM 24 C VAL 3 10.745 35.375 5.322 1.00 11.12 C ATOM 25 O VAL 3 9.738 34.679 5.137 1.00 11.12 O ATOM 26 N GLN 4 10.782 36.415 6.169 1.00 10.87 N ATOM 28 CA GLN 4 9.638 36.861 6.987 1.00 10.87 C ATOM 29 CB GLN 4 10.034 36.936 8.473 1.00 10.87 C ATOM 30 CG GLN 4 10.294 35.585 9.134 1.00 10.87 C ATOM 31 CD GLN 4 10.680 35.716 10.595 1.00 10.87 C ATOM 32 OE1 GLN 4 9.823 35.692 11.478 1.00 10.87 O ATOM 33 NE2 GLN 4 11.974 35.854 10.856 1.00 10.87 N ATOM 36 C GLN 4 9.090 38.221 6.525 1.00 10.87 C ATOM 37 O GLN 4 7.955 38.584 6.861 1.00 10.87 O ATOM 38 N GLY 5 9.888 38.939 5.726 1.00 11.44 N ATOM 40 CA GLY 5 9.509 40.255 5.217 1.00 11.44 C ATOM 41 C GLY 5 8.800 40.268 3.861 1.00 11.44 C ATOM 42 O GLY 5 7.571 40.127 3.855 1.00 11.44 O ATOM 43 N PRO 6 9.512 40.436 2.705 1.00 12.69 N ATOM 44 CD PRO 6 10.951 40.772 2.596 1.00 12.69 C ATOM 45 CA PRO 6 8.905 40.462 1.357 1.00 12.69 C ATOM 46 CB PRO 6 10.110 40.699 0.445 1.00 12.69 C ATOM 47 CG PRO 6 11.009 41.521 1.290 1.00 12.69 C ATOM 48 C PRO 6 8.134 39.195 0.929 1.00 12.69 C ATOM 49 O PRO 6 7.200 39.284 0.123 1.00 12.69 O ATOM 50 N TRP 7 8.536 38.039 1.476 1.00 10.72 N ATOM 52 CA TRP 7 7.918 36.731 1.187 1.00 10.72 C ATOM 53 CB TRP 7 9.005 35.709 0.758 1.00 10.72 C ATOM 54 CG TRP 7 8.527 34.471 -0.054 1.00 10.72 C ATOM 55 CD2 TRP 7 8.109 33.187 0.463 1.00 10.72 C ATOM 56 CE2 TRP 7 7.801 32.366 -0.659 1.00 10.72 C ATOM 57 CE3 TRP 7 7.962 32.649 1.763 1.00 10.72 C ATOM 58 CD1 TRP 7 8.454 34.365 -1.424 1.00 10.72 C ATOM 59 NE1 TRP 7 8.022 33.112 -1.786 1.00 10.72 N ATOM 61 CZ2 TRP 7 7.355 31.028 -0.525 1.00 10.72 C ATOM 62 CZ3 TRP 7 7.515 31.311 1.899 1.00 10.72 C ATOM 63 CH2 TRP 7 7.218 30.520 0.754 1.00 10.72 C ATOM 64 C TRP 7 7.143 36.228 2.422 1.00 10.72 C ATOM 65 O TRP 7 7.654 36.291 3.549 1.00 10.72 O ATOM 66 N VAL 8 5.905 35.759 2.192 1.00 11.24 N ATOM 68 CA VAL 8 5.005 35.235 3.239 1.00 11.24 C ATOM 69 CB VAL 8 3.613 36.030 3.257 1.00 11.24 C ATOM 70 CG1 VAL 8 2.803 35.819 1.961 1.00 11.24 C ATOM 71 CG2 VAL 8 2.791 35.707 4.514 1.00 11.24 C ATOM 72 C VAL 8 4.831 33.703 3.095 1.00 11.24 C ATOM 73 O VAL 8 4.775 33.185 1.973 1.00 11.24 O ATOM 74 N GLY 9 4.766 33.009 4.235 1.00 8.10 N ATOM 76 CA GLY 9 4.605 31.560 4.250 1.00 8.10 C ATOM 77 C GLY 9 3.456 31.089 5.126 1.00 8.10 C ATOM 78 O GLY 9 2.742 31.911 5.712 1.00 8.10 O ATOM 79 N SER 10 3.277 29.763 5.187 1.00 8.90 N ATOM 81 CA SER 10 2.228 29.099 5.979 1.00 8.90 C ATOM 82 CB SER 10 1.243 28.363 5.051 1.00 8.90 C ATOM 83 OG SER 10 1.918 27.475 4.173 1.00 8.90 O ATOM 85 C SER 10 2.853 28.116 6.991 1.00 8.90 C ATOM 86 O SER 10 2.145 27.551 7.838 1.00 8.90 O ATOM 87 N SER 11 4.185 27.971 6.920 1.00 8.83 N ATOM 89 CA SER 11 4.991 27.074 7.777 1.00 8.83 C ATOM 90 OG SER 11 7.145 25.906 7.844 1.00 8.83 O ATOM 92 C SER 11 5.066 27.467 9.269 1.00 8.83 C ATOM 93 O SER 11 5.066 26.584 10.136 1.00 8.83 O ATOM 94 CB SER 11 6.407 26.934 7.200 1.00 8.83 C ATOM 95 N TYR 12 5.125 28.777 9.548 1.00 10.17 N ATOM 97 CA TYR 12 5.212 29.331 10.918 1.00 10.17 C ATOM 98 CB TYR 12 5.656 30.821 10.889 1.00 10.17 C ATOM 99 CG TYR 12 4.893 31.787 9.969 1.00 10.17 C ATOM 100 CD1 TYR 12 5.381 32.102 8.678 1.00 10.17 C ATOM 101 CE1 TYR 12 4.706 33.032 7.840 1.00 10.17 C ATOM 102 CD2 TYR 12 3.704 32.427 10.401 1.00 10.17 C ATOM 103 CE2 TYR 12 3.022 33.357 9.570 1.00 10.17 C ATOM 104 CZ TYR 12 3.531 33.652 8.294 1.00 10.17 C ATOM 105 OH TYR 12 2.875 34.551 7.485 1.00 10.17 O ATOM 107 C TYR 12 3.974 29.149 11.821 1.00 10.17 C ATOM 108 O TYR 12 4.124 28.906 13.023 1.00 10.17 O ATOM 109 N VAL 13 2.771 29.247 11.223 1.00 8.20 N ATOM 111 CA VAL 13 1.429 29.112 11.868 1.00 8.20 C ATOM 112 CB VAL 13 0.974 27.571 12.029 1.00 8.20 C ATOM 113 CG1 VAL 13 1.715 26.849 13.173 1.00 8.20 C ATOM 114 CG2 VAL 13 -0.552 27.441 12.162 1.00 8.20 C ATOM 115 C VAL 13 1.165 29.976 13.140 1.00 8.20 C ATOM 116 O VAL 13 2.069 30.171 13.961 1.00 8.20 O ATOM 117 N ALA 14 -0.076 30.463 13.280 1.00 6.74 N ATOM 119 CA ALA 14 -0.499 31.306 14.412 1.00 6.74 C ATOM 120 CB ALA 14 -1.163 32.589 13.901 1.00 6.74 C ATOM 121 C ALA 14 -1.438 30.559 15.378 1.00 6.74 C ATOM 122 O ALA 14 -2.498 30.063 14.973 1.00 6.74 O ATOM 123 N GLU 15 -1.003 30.466 16.643 1.00 6.11 N ATOM 125 CA GLU 15 -1.717 29.796 17.753 1.00 6.11 C ATOM 126 CB GLU 15 -0.749 29.503 18.930 1.00 6.11 C ATOM 127 CG GLU 15 0.163 30.662 19.435 1.00 6.11 C ATOM 128 CD GLU 15 1.557 30.654 18.818 1.00 6.11 C ATOM 129 OE1 GLU 15 1.733 31.249 17.734 1.00 6.11 O ATOM 130 OE2 GLU 15 2.472 30.052 19.420 1.00 6.11 O ATOM 131 C GLU 15 -3.018 30.453 18.268 1.00 6.11 C ATOM 132 O GLU 15 -3.964 29.744 18.636 1.00 6.11 O ATOM 133 N THR 16 -3.050 31.795 18.277 1.00 6.26 N ATOM 135 CA THR 16 -4.190 32.609 18.760 1.00 6.26 C ATOM 136 CB THR 16 -3.839 34.127 18.766 1.00 6.26 C ATOM 137 OG1 THR 16 -3.319 34.509 17.485 1.00 6.26 O ATOM 139 CG2 THR 16 -2.814 34.444 19.850 1.00 6.26 C ATOM 140 C THR 16 -5.547 32.398 18.052 1.00 6.26 C ATOM 141 O THR 16 -6.571 32.241 18.726 1.00 6.26 O ATOM 142 N GLY 17 -5.541 32.367 16.714 1.00 6.36 N ATOM 144 CA GLY 17 -6.761 32.160 15.938 1.00 6.36 C ATOM 145 C GLY 17 -7.524 33.402 15.495 1.00 6.36 C ATOM 146 O GLY 17 -7.040 34.528 15.664 1.00 6.36 O ATOM 147 N GLN 18 -8.717 33.172 14.929 1.00 5.80 N ATOM 149 CA GLN 18 -9.638 34.206 14.412 1.00 5.80 C ATOM 150 CB GLN 18 -10.710 33.565 13.518 1.00 5.80 C ATOM 151 CG GLN 18 -10.192 33.007 12.195 1.00 5.80 C ATOM 152 CD GLN 18 -11.288 32.371 11.361 1.00 5.80 C ATOM 153 OE1 GLN 18 -11.556 31.175 11.477 1.00 5.80 O ATOM 154 NE2 GLN 18 -11.927 33.169 10.514 1.00 5.80 N ATOM 157 C GLN 18 -10.319 35.120 15.450 1.00 5.80 C ATOM 158 O GLN 18 -10.490 36.319 15.194 1.00 5.80 O ATOM 159 N ASN 19 -10.685 34.553 16.611 1.00 6.61 N ATOM 161 CA ASN 19 -11.365 35.271 17.714 1.00 6.61 C ATOM 162 CB ASN 19 -11.848 34.264 18.779 1.00 6.61 C ATOM 163 CG ASN 19 -13.112 34.723 19.510 1.00 6.61 C ATOM 164 OD1 ASN 19 -13.038 35.386 20.546 1.00 6.61 O ATOM 165 ND2 ASN 19 -14.274 34.354 18.976 1.00 6.61 N ATOM 168 C ASN 19 -10.474 36.359 18.356 1.00 6.61 C ATOM 169 O ASN 19 -10.929 37.493 18.555 1.00 6.61 O ATOM 170 N TRP 20 -9.212 36.009 18.644 1.00 6.58 N ATOM 172 CA TRP 20 -8.213 36.922 19.235 1.00 6.58 C ATOM 173 CB TRP 20 -6.977 36.142 19.723 1.00 6.58 C ATOM 174 CG TRP 20 -7.174 35.302 21.009 1.00 6.58 C ATOM 175 CD2 TRP 20 -6.953 35.721 22.377 1.00 6.58 C ATOM 176 CE2 TRP 20 -7.231 34.599 23.207 1.00 6.58 C ATOM 177 CE3 TRP 20 -6.548 36.934 22.981 1.00 6.58 C ATOM 178 CD1 TRP 20 -7.563 33.983 21.081 1.00 6.58 C ATOM 179 NE1 TRP 20 -7.597 33.564 22.388 1.00 6.58 N ATOM 181 CZ2 TRP 20 -7.117 34.648 24.618 1.00 6.58 C ATOM 182 CZ3 TRP 20 -6.433 36.986 24.393 1.00 6.58 C ATOM 183 CH2 TRP 20 -6.719 35.842 25.190 1.00 6.58 C ATOM 184 C TRP 20 -7.803 38.026 18.247 1.00 6.58 C ATOM 185 O TRP 20 -7.569 39.170 18.655 1.00 6.58 O ATOM 186 N ALA 21 -7.732 37.661 16.956 1.00 6.09 N ATOM 188 CA ALA 21 -7.380 38.570 15.845 1.00 6.09 C ATOM 189 CB ALA 21 -7.125 37.772 14.572 1.00 6.09 C ATOM 190 C ALA 21 -8.478 39.624 15.604 1.00 6.09 C ATOM 191 O ALA 21 -8.167 40.791 15.333 1.00 6.09 O ATOM 192 N SER 22 -9.746 39.196 15.717 1.00 5.87 N ATOM 194 CA SER 22 -10.933 40.062 15.549 1.00 5.87 C ATOM 195 CB SER 22 -12.212 39.220 15.434 1.00 5.87 C ATOM 196 OG SER 22 -12.369 38.345 16.538 1.00 5.87 O ATOM 198 C SER 22 -11.048 41.081 16.698 1.00 5.87 C ATOM 199 O SER 22 -11.340 42.259 16.456 1.00 5.87 O ATOM 200 N LEU 23 -10.773 40.616 17.930 1.00 6.47 N ATOM 202 CA LEU 23 -10.794 41.442 19.157 1.00 6.47 C ATOM 203 CB LEU 23 -10.675 40.568 20.423 1.00 6.47 C ATOM 204 CG LEU 23 -11.827 39.669 20.917 1.00 6.47 C ATOM 205 CD1 LEU 23 -11.235 38.434 21.573 1.00 6.47 C ATOM 206 CD2 LEU 23 -12.771 40.393 21.895 1.00 6.47 C ATOM 207 C LEU 23 -9.643 42.462 19.110 1.00 6.47 C ATOM 208 O LEU 23 -9.795 43.600 19.567 1.00 6.47 O ATOM 209 N ALA 24 -8.501 42.019 18.563 1.00 6.52 N ATOM 211 CA ALA 24 -7.277 42.823 18.374 1.00 6.52 C ATOM 212 CB ALA 24 -6.105 41.919 18.009 1.00 6.52 C ATOM 213 C ALA 24 -7.482 43.895 17.288 1.00 6.52 C ATOM 214 O ALA 24 -6.974 45.011 17.409 1.00 6.52 O ATOM 215 N ALA 25 -8.246 43.535 16.245 1.00 6.59 N ATOM 217 CA ALA 25 -8.569 44.407 15.098 1.00 6.59 C ATOM 218 CB ALA 25 -9.222 43.591 13.985 1.00 6.59 C ATOM 219 C ALA 25 -9.463 45.601 15.472 1.00 6.59 C ATOM 220 O ALA 25 -9.186 46.729 15.050 1.00 6.59 O ATOM 221 N ASN 26 -10.521 45.340 16.256 1.00 7.49 N ATOM 223 CA ASN 26 -11.470 46.375 16.715 1.00 7.49 C ATOM 224 CB ASN 26 -12.810 45.762 17.199 1.00 7.49 C ATOM 225 CG ASN 26 -12.643 44.662 18.258 1.00 7.49 C ATOM 226 OD1 ASN 26 -12.135 44.900 19.358 1.00 7.49 O ATOM 227 ND2 ASN 26 -13.126 43.467 17.939 1.00 7.49 N ATOM 230 C ASN 26 -10.922 47.396 17.738 1.00 7.49 C ATOM 231 O ASN 26 -11.272 48.578 17.667 1.00 7.49 O ATOM 232 N GLU 27 -10.068 46.930 18.663 1.00 6.92 N ATOM 234 CA GLU 27 -9.459 47.772 19.715 1.00 6.92 C ATOM 235 CG GLU 27 -11.068 47.086 21.617 1.00 6.92 C ATOM 236 CD GLU 27 -11.186 46.438 22.984 1.00 6.92 C ATOM 237 OE1 GLU 27 -11.379 45.206 23.046 1.00 6.92 O ATOM 238 OE2 GLU 27 -11.088 47.163 23.998 1.00 6.92 O ATOM 239 C GLU 27 -7.980 48.142 19.441 1.00 6.92 C ATOM 240 O GLU 27 -7.724 49.118 18.725 1.00 6.92 O ATOM 241 CB GLU 27 -9.631 47.123 21.102 1.00 6.92 C ATOM 242 N LEU 28 -7.030 47.376 20.004 1.00 7.00 N ATOM 244 CA LEU 28 -5.578 47.598 19.840 1.00 7.00 C ATOM 245 CB LEU 28 -4.885 47.784 21.211 1.00 7.00 C ATOM 246 CG LEU 28 -5.160 49.016 22.093 1.00 7.00 C ATOM 247 CD1 LEU 28 -5.362 48.569 23.534 1.00 7.00 C ATOM 248 CD2 LEU 28 -4.025 50.049 22.006 1.00 7.00 C ATOM 249 C LEU 28 -4.939 46.426 19.080 1.00 7.00 C ATOM 250 O LEU 28 -5.211 45.259 19.399 1.00 7.00 O ATOM 251 N ARG 29 -4.104 46.743 18.080 1.00 11.96 N ATOM 253 CA ARG 29 -3.421 45.748 17.229 1.00 11.96 C ATOM 254 CB ARG 29 -3.321 46.248 15.765 1.00 11.96 C ATOM 255 CG ARG 29 -2.773 47.680 15.550 1.00 11.96 C ATOM 256 CD ARG 29 -2.721 48.064 14.071 1.00 11.96 C ATOM 257 NE ARG 29 -4.052 48.237 13.480 1.00 11.96 N ATOM 259 CZ ARG 29 -4.292 48.568 12.211 1.00 11.96 C ATOM 260 NH1 ARG 29 -5.543 48.695 11.794 1.00 11.96 N ATOM 263 NH2 ARG 29 -3.296 48.774 11.354 1.00 11.96 N ATOM 266 C ARG 29 -2.067 45.198 17.743 1.00 11.96 C ATOM 267 O ARG 29 -1.042 45.896 17.700 1.00 11.96 O ATOM 268 N VAL 30 -2.108 43.966 18.273 1.00 12.80 N ATOM 270 CA VAL 30 -0.938 43.235 18.810 1.00 12.80 C ATOM 271 CB VAL 30 -1.038 42.981 20.381 1.00 12.80 C ATOM 272 CG1 VAL 30 0.332 42.593 20.968 1.00 12.80 C ATOM 273 CG2 VAL 30 -1.574 44.216 21.110 1.00 12.80 C ATOM 274 C VAL 30 -0.895 41.880 18.064 1.00 12.80 C ATOM 275 O VAL 30 0.193 41.351 17.792 1.00 12.80 O ATOM 276 N THR 31 -2.085 41.356 17.727 1.00 10.84 N ATOM 278 CA THR 31 -2.280 40.073 17.019 1.00 10.84 C ATOM 279 CB THR 31 -3.387 39.216 17.737 1.00 10.84 C ATOM 280 OG1 THR 31 -3.419 39.545 19.133 1.00 10.84 O ATOM 282 CG2 THR 31 -3.093 37.715 17.606 1.00 10.84 C ATOM 283 C THR 31 -2.664 40.361 15.541 1.00 10.84 C ATOM 284 O THR 31 -2.497 41.496 15.079 1.00 10.84 O ATOM 285 N GLU 32 -3.166 39.342 14.822 1.00 10.95 N ATOM 287 CA GLU 32 -3.592 39.429 13.406 1.00 10.95 C ATOM 288 CB GLU 32 -3.832 38.021 12.833 1.00 10.95 C ATOM 289 CG GLU 32 -2.577 37.165 12.687 1.00 10.95 C ATOM 290 CD GLU 32 -2.870 35.788 12.122 1.00 10.95 C ATOM 291 OE1 GLU 32 -2.808 35.626 10.884 1.00 10.95 O ATOM 292 OE2 GLU 32 -3.162 34.867 12.914 1.00 10.95 O ATOM 293 C GLU 32 -4.854 40.301 13.223 1.00 10.95 C ATOM 294 O GLU 32 -5.430 40.754 14.220 1.00 10.95 O ATOM 295 N ARG 33 -5.258 40.545 11.960 1.00 10.99 N ATOM 297 CA ARG 33 -6.433 41.370 11.549 1.00 10.99 C ATOM 298 CB ARG 33 -7.764 40.809 12.103 1.00 10.99 C ATOM 299 CG ARG 33 -8.213 39.502 11.465 1.00 10.99 C ATOM 300 CD ARG 33 -9.548 39.040 12.030 1.00 10.99 C ATOM 301 NE ARG 33 -9.999 37.786 11.424 1.00 10.99 N ATOM 303 CZ ARG 33 -11.151 37.172 11.694 1.00 10.99 C ATOM 304 NH1 ARG 33 -11.447 36.037 11.076 1.00 10.99 N ATOM 307 NH2 ARG 33 -12.011 37.678 12.573 1.00 10.99 N ATOM 310 C ARG 33 -6.263 42.885 11.889 1.00 10.99 C ATOM 311 O ARG 33 -5.438 43.200 12.755 1.00 10.99 O ATOM 312 N PRO 34 -7.014 43.842 11.237 1.00 8.86 N ATOM 313 CD PRO 34 -6.692 45.188 11.763 1.00 8.86 C ATOM 314 CA PRO 34 -8.063 43.992 10.197 1.00 8.86 C ATOM 315 CB PRO 34 -8.204 45.516 10.081 1.00 8.86 C ATOM 316 CG PRO 34 -7.936 45.979 11.441 1.00 8.86 C ATOM 317 C PRO 34 -7.843 43.336 8.810 1.00 8.86 C ATOM 318 O PRO 34 -6.978 42.467 8.657 1.00 8.86 O ATOM 319 N PHE 35 -8.605 43.802 7.808 1.00 7.83 N ATOM 321 CA PHE 35 -8.591 43.312 6.413 1.00 7.83 C ATOM 322 CB PHE 35 -9.730 43.986 5.594 1.00 7.83 C ATOM 323 CG PHE 35 -9.791 45.518 5.698 1.00 7.83 C ATOM 324 CD1 PHE 35 -10.581 46.145 6.693 1.00 7.83 C ATOM 325 CD2 PHE 35 -9.091 46.336 4.779 1.00 7.83 C ATOM 326 CE1 PHE 35 -10.672 47.562 6.772 1.00 7.83 C ATOM 327 CE2 PHE 35 -9.173 47.755 4.846 1.00 7.83 C ATOM 328 CZ PHE 35 -9.966 48.369 5.847 1.00 7.83 C ATOM 329 C PHE 35 -7.255 43.368 5.638 1.00 7.83 C ATOM 330 O PHE 35 -6.973 42.469 4.838 1.00 7.83 O ATOM 331 N TRP 36 -6.452 44.414 5.888 1.00 8.98 N ATOM 333 CA TRP 36 -5.138 44.634 5.238 1.00 8.98 C ATOM 334 CB TRP 36 -4.619 46.050 5.598 1.00 8.98 C ATOM 335 CG TRP 36 -3.527 46.669 4.683 1.00 8.98 C ATOM 336 CD2 TRP 36 -2.094 46.582 4.843 1.00 8.98 C ATOM 337 CE2 TRP 36 -1.508 47.354 3.798 1.00 8.98 C ATOM 338 CE3 TRP 36 -1.243 45.928 5.765 1.00 8.98 C ATOM 339 CD1 TRP 36 -3.733 47.466 3.579 1.00 8.98 C ATOM 340 NE1 TRP 36 -2.532 47.874 3.052 1.00 8.98 N ATOM 342 CZ2 TRP 36 -0.107 47.494 3.646 1.00 8.98 C ATOM 343 CZ3 TRP 36 0.160 46.067 5.615 1.00 8.98 C ATOM 344 CH2 TRP 36 0.707 46.848 4.559 1.00 8.98 C ATOM 345 C TRP 36 -4.108 43.548 5.640 1.00 8.98 C ATOM 346 O TRP 36 -3.447 42.968 4.767 1.00 8.98 O ATOM 347 N ILE 37 -4.025 43.259 6.948 1.00 8.79 N ATOM 349 CA ILE 37 -3.117 42.242 7.527 1.00 8.79 C ATOM 350 CB ILE 37 -3.001 42.380 9.102 1.00 8.79 C ATOM 351 CG2 ILE 37 -1.908 41.418 9.662 1.00 8.79 C ATOM 352 CG1 ILE 37 -2.617 43.826 9.475 1.00 8.79 C ATOM 353 CD1 ILE 37 -3.173 44.341 10.811 1.00 8.79 C ATOM 354 C ILE 37 -3.596 40.830 7.110 1.00 8.79 C ATOM 355 O ILE 37 -2.771 39.962 6.802 1.00 8.79 O ATOM 356 N SER 38 -4.927 40.653 7.054 1.00 7.79 N ATOM 358 CA SER 38 -5.596 39.391 6.675 1.00 7.79 C ATOM 359 CB SER 38 -7.097 39.471 6.974 1.00 7.79 C ATOM 360 OG SER 38 -7.334 39.711 8.350 1.00 7.79 O ATOM 362 C SER 38 -5.374 39.030 5.194 1.00 7.79 C ATOM 363 O SER 38 -5.150 37.857 4.871 1.00 7.79 O ATOM 364 N SER 39 -5.443 40.045 4.320 1.00 6.27 N ATOM 366 CA SER 39 -5.237 39.914 2.863 1.00 6.27 C ATOM 367 CB SER 39 -5.713 41.181 2.137 1.00 6.27 C ATOM 368 OG SER 39 -5.100 42.347 2.665 1.00 6.27 O ATOM 370 C SER 39 -3.772 39.606 2.497 1.00 6.27 C ATOM 371 O SER 39 -3.512 38.773 1.621 1.00 6.27 O ATOM 372 N PHE 40 -2.839 40.291 3.177 1.00 7.12 N ATOM 374 CA PHE 40 -1.381 40.140 2.991 1.00 7.12 C ATOM 375 CB PHE 40 -0.624 41.337 3.616 1.00 7.12 C ATOM 376 CG PHE 40 -0.406 42.516 2.667 1.00 7.12 C ATOM 377 CD1 PHE 40 0.822 42.665 1.977 1.00 7.12 C ATOM 378 CD2 PHE 40 -1.410 43.497 2.472 1.00 7.12 C ATOM 379 CE1 PHE 40 1.049 43.768 1.109 1.00 7.12 C ATOM 380 CE2 PHE 40 -1.196 44.604 1.607 1.00 7.12 C ATOM 381 CZ PHE 40 0.036 44.740 0.924 1.00 7.12 C ATOM 382 C PHE 40 -0.763 38.811 3.461 1.00 7.12 C ATOM 383 O PHE 40 0.154 38.300 2.807 1.00 7.12 O ATOM 384 N ILE 41 -1.264 38.266 4.580 1.00 7.17 N ATOM 386 CA ILE 41 -0.778 36.989 5.158 1.00 7.17 C ATOM 387 CB ILE 41 -1.227 36.777 6.665 1.00 7.17 C ATOM 388 CG2 ILE 41 -0.533 37.811 7.563 1.00 7.17 C ATOM 389 CG1 ILE 41 -2.762 36.815 6.827 1.00 7.17 C ATOM 390 CD1 ILE 41 -3.338 35.729 7.739 1.00 7.17 C ATOM 391 C ILE 41 -1.088 35.733 4.313 1.00 7.17 C ATOM 392 O ILE 41 -0.257 34.824 4.219 1.00 7.17 O ATOM 393 N GLY 42 -2.272 35.722 3.687 1.00 6.76 N ATOM 395 CA GLY 42 -2.712 34.604 2.855 1.00 6.76 C ATOM 396 C GLY 42 -2.344 34.712 1.382 1.00 6.76 C ATOM 397 O GLY 42 -2.382 35.810 0.812 1.00 6.76 O ATOM 398 N ARG 43 -1.992 33.569 0.781 1.00 5.68 N ATOM 400 CA ARG 43 -1.596 33.459 -0.634 1.00 5.68 C ATOM 401 CB ARG 43 -0.279 32.672 -0.762 1.00 5.68 C ATOM 402 CG ARG 43 0.956 33.392 -0.214 1.00 5.68 C ATOM 403 CD ARG 43 2.228 32.559 -0.373 1.00 5.68 C ATOM 404 NE ARG 43 2.249 31.379 0.497 1.00 5.68 N ATOM 406 CZ ARG 43 3.208 30.452 0.510 1.00 5.68 C ATOM 407 NH1 ARG 43 4.258 30.535 -0.301 1.00 5.68 N ATOM 410 NH2 ARG 43 3.114 29.427 1.346 1.00 5.68 N ATOM 413 C ARG 43 -2.694 32.794 -1.488 1.00 5.68 C ATOM 414 O ARG 43 -2.603 32.783 -2.724 1.00 5.68 O ATOM 415 N SER 44 -3.744 32.295 -0.819 1.00 7.56 N ATOM 417 CA SER 44 -4.889 31.615 -1.456 1.00 7.56 C ATOM 418 CB SER 44 -5.466 30.561 -0.502 1.00 7.56 C ATOM 419 OG SER 44 -6.383 29.703 -1.163 1.00 7.56 O ATOM 421 C SER 44 -5.985 32.600 -1.918 1.00 7.56 C ATOM 422 O SER 44 -6.018 33.748 -1.458 1.00 7.56 O ATOM 423 N LYS 45 -6.864 32.135 -2.820 1.00 5.45 N ATOM 425 CA LYS 45 -7.962 32.929 -3.407 1.00 5.45 C ATOM 426 CG LYS 45 -6.781 33.097 -5.707 1.00 5.45 C ATOM 427 CD LYS 45 -6.942 32.815 -7.197 1.00 5.45 C ATOM 428 CE LYS 45 -5.707 33.222 -7.998 1.00 5.45 C ATOM 429 NZ LYS 45 -4.510 32.372 -7.724 1.00 5.45 N ATOM 433 C LYS 45 -9.351 32.660 -2.792 1.00 5.45 C ATOM 434 O LYS 45 -9.701 31.499 -2.564 1.00 5.45 O ATOM 435 CB LYS 45 -8.028 32.683 -4.926 1.00 5.45 C TER END