####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS149_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS149_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 17 - 35 4.91 14.87 LCS_AVERAGE: 40.50 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 3 - 10 2.00 23.68 LONGEST_CONTINUOUS_SEGMENT: 8 9 - 16 1.60 21.04 LONGEST_CONTINUOUS_SEGMENT: 8 22 - 29 1.92 15.89 LONGEST_CONTINUOUS_SEGMENT: 8 31 - 38 1.94 27.68 LCS_AVERAGE: 16.58 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 33 - 38 0.81 26.17 LCS_AVERAGE: 9.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 16 3 3 3 3 6 8 9 10 13 15 16 17 18 19 22 25 26 28 28 29 LCS_GDT V 3 V 3 3 8 16 3 3 3 6 7 9 9 10 13 15 16 17 18 20 23 25 28 29 32 32 LCS_GDT Q 4 Q 4 3 8 16 3 4 5 6 7 9 9 10 12 12 15 17 18 20 23 26 28 29 32 32 LCS_GDT G 5 G 5 4 8 16 0 3 5 6 7 9 9 10 11 13 14 16 17 20 23 26 28 29 32 32 LCS_GDT P 6 P 6 4 8 18 3 3 5 6 7 9 9 10 11 13 14 14 17 19 23 26 28 29 32 32 LCS_GDT W 7 W 7 4 8 18 3 3 5 6 7 9 9 10 11 13 14 16 17 19 23 26 28 29 32 32 LCS_GDT V 8 V 8 4 8 18 3 4 5 6 7 9 9 10 12 12 14 16 17 20 23 26 28 29 32 32 LCS_GDT G 9 G 9 5 8 18 3 4 5 7 8 9 9 10 12 12 13 16 17 19 21 26 28 29 32 32 LCS_GDT S 10 S 10 5 8 18 3 4 5 7 8 8 8 10 12 12 14 16 17 20 23 26 28 29 32 32 LCS_GDT S 11 S 11 5 8 18 3 4 5 7 8 8 8 10 12 12 14 16 17 18 21 24 26 27 32 32 LCS_GDT Y 12 Y 12 5 8 18 3 4 5 7 8 8 8 10 12 12 14 16 17 18 21 24 26 28 32 32 LCS_GDT V 13 V 13 5 8 18 3 4 5 7 8 9 9 10 12 12 14 16 17 20 23 26 28 29 32 32 LCS_GDT A 14 A 14 5 8 18 3 4 5 7 8 9 9 10 13 15 16 17 18 20 23 26 28 29 32 32 LCS_GDT E 15 E 15 5 8 18 3 4 5 7 8 8 8 10 13 15 16 17 18 20 23 26 28 29 32 32 LCS_GDT T 16 T 16 4 8 18 3 4 5 7 8 8 8 10 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT G 17 G 17 3 5 19 3 3 4 5 6 8 10 11 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT Q 18 Q 18 4 5 19 3 3 4 5 6 7 10 11 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT N 19 N 19 4 5 19 3 3 6 7 7 9 10 11 12 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT W 20 W 20 4 7 19 3 4 6 7 8 9 10 11 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT A 21 A 21 4 7 19 3 4 5 5 7 9 10 11 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT S 22 S 22 4 8 19 3 4 5 6 7 9 9 10 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT L 23 L 23 4 8 19 3 4 6 7 8 9 10 11 13 15 18 19 20 21 23 26 28 29 32 32 LCS_GDT A 24 A 24 4 8 19 3 4 6 7 8 9 10 11 12 14 18 19 20 21 23 26 28 29 32 32 LCS_GDT A 25 A 25 4 8 19 3 4 6 7 8 11 11 12 12 14 18 19 20 21 23 26 28 29 32 32 LCS_GDT N 26 N 26 4 8 19 3 4 6 7 8 11 11 12 12 13 15 17 18 20 23 26 28 29 32 32 LCS_GDT E 27 E 27 4 8 19 3 4 6 7 8 9 10 11 11 12 13 15 16 18 21 24 25 29 32 32 LCS_GDT L 28 L 28 4 8 19 3 4 6 7 8 9 10 11 11 12 14 16 16 18 18 20 21 25 27 29 LCS_GDT R 29 R 29 4 8 19 3 4 5 7 8 9 10 11 12 13 14 16 17 18 21 26 28 29 32 32 LCS_GDT V 30 V 30 4 5 19 3 4 4 5 6 7 10 10 12 13 15 17 18 20 23 26 28 29 32 32 LCS_GDT T 31 T 31 4 8 19 3 4 4 7 7 7 10 10 12 13 15 17 18 20 23 26 28 29 32 32 LCS_GDT E 32 E 32 4 8 19 3 4 4 5 6 6 10 10 12 13 15 17 18 20 23 26 28 29 32 32 LCS_GDT R 33 R 33 6 8 19 3 5 6 7 7 11 11 12 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT P 34 P 34 6 8 19 3 5 6 7 8 11 11 12 13 16 18 19 20 21 23 26 28 29 32 32 LCS_GDT F 35 F 35 6 8 19 3 5 6 7 8 11 11 12 13 16 18 19 20 21 23 26 28 28 32 32 LCS_GDT W 36 W 36 6 8 17 3 5 6 7 8 11 11 12 13 16 18 19 20 21 22 25 26 28 28 30 LCS_GDT I 37 I 37 6 8 17 3 5 6 7 7 11 11 12 12 13 14 17 19 21 22 25 26 26 28 29 LCS_GDT S 38 S 38 6 8 17 3 5 6 7 8 11 11 12 12 16 18 19 20 21 22 25 26 28 28 29 LCS_GDT S 39 S 39 4 7 17 3 4 5 6 7 9 10 12 13 16 18 19 20 21 22 25 26 28 28 29 LCS_GDT F 40 F 40 3 6 17 2 3 4 5 8 11 11 12 13 16 18 19 20 21 22 25 26 28 28 29 LCS_GDT I 41 I 41 4 6 17 3 4 4 5 8 11 11 12 13 16 18 19 20 21 22 25 26 28 28 29 LCS_GDT G 42 G 42 4 6 17 3 4 4 5 8 11 11 12 13 16 18 19 20 21 21 23 24 28 28 29 LCS_GDT R 43 R 43 4 6 14 3 4 4 5 6 6 7 10 11 11 14 17 20 21 21 23 23 26 27 28 LCS_GDT S 44 S 44 4 6 14 3 4 4 5 6 6 8 10 11 13 14 17 19 21 21 23 24 26 27 28 LCS_GDT K 45 K 45 3 6 14 0 3 3 4 4 5 7 7 10 11 11 13 15 17 19 22 23 24 27 28 LCS_AVERAGE LCS_A: 22.28 ( 9.76 16.58 40.50 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 5 6 7 8 11 11 12 13 16 18 19 20 21 23 26 28 29 32 32 GDT PERCENT_AT 6.82 11.36 13.64 15.91 18.18 25.00 25.00 27.27 29.55 36.36 40.91 43.18 45.45 47.73 52.27 59.09 63.64 65.91 72.73 72.73 GDT RMS_LOCAL 0.04 0.71 0.81 1.35 1.60 2.30 2.30 2.55 3.27 3.62 4.00 4.15 4.31 4.51 5.44 6.17 6.40 6.60 6.94 6.94 GDT RMS_ALL_AT 23.41 26.41 26.17 13.02 21.04 18.79 18.79 18.91 14.04 13.79 13.70 13.79 14.04 14.19 12.50 13.11 12.97 13.16 13.01 13.01 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.914 0 0.265 0.317 21.737 0.000 0.000 - LGA V 3 V 3 21.711 0 0.127 1.044 23.518 0.000 0.000 21.098 LGA Q 4 Q 4 27.705 0 0.311 0.628 33.377 0.000 0.000 33.377 LGA G 5 G 5 29.774 0 0.077 0.077 33.315 0.000 0.000 - LGA P 6 P 6 34.906 0 0.580 0.638 38.574 0.000 0.000 38.574 LGA W 7 W 7 36.266 0 0.275 1.266 46.965 0.000 0.000 46.965 LGA V 8 V 8 33.134 0 0.655 1.491 34.790 0.000 0.000 31.220 LGA G 9 G 9 35.611 0 0.513 0.513 35.611 0.000 0.000 - LGA S 10 S 10 36.177 0 0.343 0.992 39.425 0.000 0.000 39.425 LGA S 11 S 11 30.884 0 0.126 0.512 33.293 0.000 0.000 27.362 LGA Y 12 Y 12 28.155 0 0.077 1.494 32.713 0.000 0.000 32.713 LGA V 13 V 13 27.679 0 0.106 0.982 30.702 0.000 0.000 29.743 LGA A 14 A 14 24.934 0 0.172 0.504 26.430 0.000 0.000 - LGA E 15 E 15 20.868 0 0.324 0.741 22.733 0.000 0.000 14.606 LGA T 16 T 16 17.116 0 0.299 1.368 19.519 0.000 0.000 19.519 LGA G 17 G 17 18.035 0 0.504 0.504 18.223 0.000 0.000 - LGA Q 18 Q 18 17.600 0 0.641 0.944 19.585 0.000 0.000 19.585 LGA N 19 N 19 20.819 0 0.081 1.019 23.369 0.000 0.000 21.898 LGA W 20 W 20 17.103 0 0.615 1.151 25.587 0.000 0.000 25.587 LGA A 21 A 21 14.755 0 0.055 0.640 16.209 0.000 0.000 - LGA S 22 S 22 11.967 0 0.112 0.657 15.286 0.000 0.000 15.286 LGA L 23 L 23 7.247 0 0.162 1.171 12.934 1.364 0.682 12.934 LGA A 24 A 24 7.974 0 0.104 0.548 9.027 0.000 0.000 - LGA A 25 A 25 2.066 0 0.170 0.569 4.375 26.364 24.727 - LGA N 26 N 26 2.950 0 0.085 0.940 7.565 23.182 14.545 5.232 LGA E 27 E 27 9.375 0 0.056 1.261 12.735 0.000 0.000 10.774 LGA L 28 L 28 10.245 0 0.188 1.214 13.997 0.000 0.000 10.481 LGA R 29 R 29 12.101 0 0.116 1.470 20.907 0.000 0.000 19.918 LGA V 30 V 30 10.392 0 0.170 0.215 10.900 0.000 0.000 10.730 LGA T 31 T 31 11.811 0 0.072 1.444 16.005 0.000 0.000 13.479 LGA E 32 E 32 9.471 0 0.626 1.397 16.952 0.000 0.000 16.066 LGA R 33 R 33 2.153 0 0.049 1.285 10.135 29.091 20.496 10.135 LGA P 34 P 34 0.894 0 0.104 0.985 2.223 74.091 62.597 1.269 LGA F 35 F 35 1.275 0 0.041 1.330 4.634 70.455 39.008 4.398 LGA W 36 W 36 2.231 0 0.151 0.236 11.472 52.273 15.325 11.472 LGA I 37 I 37 2.856 0 0.061 1.600 7.118 29.091 17.045 7.118 LGA S 38 S 38 1.916 0 0.679 0.608 3.338 39.545 48.182 1.363 LGA S 39 S 39 4.189 0 0.739 0.837 6.876 15.455 10.303 6.876 LGA F 40 F 40 2.742 0 0.658 0.907 7.545 38.636 14.215 7.545 LGA I 41 I 41 2.632 0 0.159 1.047 5.658 27.273 23.409 5.658 LGA G 42 G 42 3.013 0 0.162 0.162 5.296 11.818 11.818 - LGA R 43 R 43 9.403 0 0.058 0.078 19.607 0.000 0.000 19.607 LGA S 44 S 44 14.056 0 0.066 0.785 15.999 0.000 0.000 15.360 LGA K 45 K 45 17.388 0 0.054 0.873 21.768 0.000 0.000 21.768 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 10.737 10.573 11.870 9.969 6.872 3.896 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.55 28.409 25.487 0.453 LGA_LOCAL RMSD: 2.548 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.911 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 10.737 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.677827 * X + -0.498309 * Y + 0.540592 * Z + 70.449120 Y_new = -0.586120 * X + -0.810137 * Y + -0.011858 * Z + -25.947355 Z_new = 0.443862 * X + -0.308814 * Y + -0.841202 * Z + -0.995355 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.712970 -0.459904 -2.789756 [DEG: -40.8501 -26.3506 -159.8413 ] ZXZ: 1.548865 2.570298 2.178660 [DEG: 88.7434 147.2672 124.8280 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS149_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS149_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.55 25.487 10.74 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS149_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 3p4g_a ATOM 9 N ALA 2 6.616 45.735 27.575 1.00297.00 N ATOM 10 CA ALA 2 6.275 46.610 28.655 1.00297.00 C ATOM 11 C ALA 2 5.021 47.327 28.281 1.00297.00 C ATOM 12 O ALA 2 5.057 48.381 27.647 1.00297.00 O ATOM 13 CB ALA 2 6.549 46.886 30.143 1.00297.00 C ATOM 14 N VAL 3 3.868 46.744 28.652 1.00297.00 N ATOM 15 CA VAL 3 2.600 47.334 28.345 1.00297.00 C ATOM 16 C VAL 3 1.786 47.282 29.595 1.00297.00 C ATOM 17 O VAL 3 2.051 46.476 30.485 1.00297.00 O ATOM 18 CB VAL 3 1.780 46.722 27.245 1.00297.00 C ATOM 19 CG1 VAL 3 1.354 45.310 27.678 1.00297.00 C ATOM 20 CG2 VAL 3 0.597 47.654 26.930 1.00297.00 C ATOM 21 N GLN 4 0.779 48.171 29.704 1.00 62.83 N ATOM 22 CA GLN 4 -0.038 48.182 30.880 1.00 62.83 C ATOM 23 C GLN 4 -0.720 46.858 30.963 1.00 62.83 C ATOM 24 O GLN 4 -1.899 46.728 30.638 1.00 62.83 O ATOM 25 CB GLN 4 0.147 48.718 32.312 1.00 62.83 C ATOM 26 CG GLN 4 0.996 49.991 32.379 1.00 62.83 C ATOM 27 CD GLN 4 1.213 50.352 33.844 1.00 62.83 C ATOM 28 OE1 GLN 4 0.754 49.654 34.745 1.00 62.83 O ATOM 29 NE2 GLN 4 1.944 51.473 34.089 1.00 62.83 N ATOM 30 N GLY 5 0.034 45.828 31.388 1.00 49.79 N ATOM 31 CA GLY 5 -0.498 44.502 31.446 1.00 49.79 C ATOM 32 C GLY 5 -0.644 44.125 32.879 1.00 49.79 C ATOM 33 O GLY 5 -0.468 44.930 33.793 1.00 49.79 O ATOM 34 N PRO 6 -0.950 42.874 33.058 1.00 19.09 N ATOM 35 CA PRO 6 -1.208 42.331 34.360 1.00 19.09 C ATOM 36 C PRO 6 -0.046 42.587 35.262 1.00 19.09 C ATOM 37 O PRO 6 0.435 43.718 35.292 1.00 19.09 O ATOM 38 CB PRO 6 -2.529 42.414 35.121 1.00 19.09 C ATOM 39 CG PRO 6 -2.736 40.970 35.612 1.00 19.09 C ATOM 40 CD PRO 6 -2.093 40.110 34.512 1.00 19.09 C ATOM 41 N TRP 7 0.414 41.576 36.020 1.00 21.03 N ATOM 42 CA TRP 7 1.527 41.841 36.880 1.00 21.03 C ATOM 43 C TRP 7 2.266 42.982 36.269 1.00 21.03 C ATOM 44 O TRP 7 2.871 42.836 35.208 1.00 21.03 O ATOM 45 CB TRP 7 2.567 40.799 37.320 1.00 21.03 C ATOM 46 CG TRP 7 3.511 41.292 38.388 1.00 21.03 C ATOM 47 CD1 TRP 7 4.719 41.913 38.272 1.00 21.03 C ATOM 48 CD2 TRP 7 3.249 41.166 39.794 1.00 21.03 C ATOM 49 NE1 TRP 7 5.226 42.189 39.519 1.00 21.03 N ATOM 50 CE2 TRP 7 4.332 41.733 40.465 1.00 21.03 C ATOM 51 CE3 TRP 7 2.193 40.626 40.467 1.00 21.03 C ATOM 52 CZ2 TRP 7 4.373 41.766 41.829 1.00 21.03 C ATOM 53 CZ3 TRP 7 2.238 40.660 41.843 1.00 21.03 C ATOM 54 CH2 TRP 7 3.308 41.220 42.510 1.00 21.03 C ATOM 55 N VAL 8 2.231 44.162 36.918 1.00 21.01 N ATOM 56 CA VAL 8 2.920 45.282 36.352 1.00 21.01 C ATOM 57 C VAL 8 4.196 45.485 37.102 1.00 21.01 C ATOM 58 O VAL 8 4.364 44.995 38.219 1.00 21.01 O ATOM 59 CB VAL 8 2.163 46.572 36.477 1.00 21.01 C ATOM 60 CG1 VAL 8 0.844 46.466 35.691 1.00 21.01 C ATOM 61 CG2 VAL 8 1.970 46.868 37.973 1.00 21.01 C ATOM 62 N GLY 9 5.139 46.212 36.475 1.00 26.49 N ATOM 63 CA GLY 9 6.369 46.568 37.118 1.00 26.49 C ATOM 64 C GLY 9 7.257 47.264 36.142 1.00 26.49 C ATOM 65 O GLY 9 7.027 47.243 34.935 1.00 26.49 O ATOM 66 N SER 10 8.315 47.907 36.674 1.00 23.78 N ATOM 67 CA SER 10 9.295 48.547 35.849 1.00 23.78 C ATOM 68 C SER 10 9.919 47.455 35.048 1.00 23.78 C ATOM 69 O SER 10 9.465 47.152 33.946 1.00 23.78 O ATOM 70 CB SER 10 8.860 47.958 37.201 1.00 23.78 C ATOM 71 OG SER 10 8.317 48.981 38.025 1.00 23.78 O ATOM 72 N SER 11 10.991 46.835 35.573 1.00 25.24 N ATOM 73 CA SER 11 11.614 45.800 34.809 1.00 25.24 C ATOM 74 C SER 11 10.585 44.751 34.555 1.00 25.24 C ATOM 75 O SER 11 10.726 43.927 33.652 1.00 25.24 O ATOM 76 CB SER 11 11.443 46.892 33.737 1.00 25.24 C ATOM 77 OG SER 11 11.492 46.314 32.440 1.00 25.24 O ATOM 78 N TYR 12 9.523 44.749 35.379 1.00 23.93 N ATOM 79 CA TYR 12 8.463 43.802 35.215 1.00 23.93 C ATOM 80 C TYR 12 8.082 43.846 33.777 1.00 23.93 C ATOM 81 O TYR 12 7.458 42.919 33.263 1.00 23.93 O ATOM 82 CB TYR 12 9.763 42.986 35.333 1.00 23.93 C ATOM 83 CG TYR 12 10.832 43.687 34.565 1.00 23.93 C ATOM 84 CD1 TYR 12 11.456 44.801 35.079 1.00 23.93 C ATOM 85 CD2 TYR 12 11.220 43.216 33.331 1.00 23.93 C ATOM 86 CE1 TYR 12 12.443 45.440 34.367 1.00 23.93 C ATOM 87 CE2 TYR 12 12.207 43.852 32.614 1.00 23.93 C ATOM 88 CZ TYR 12 12.819 44.965 33.133 1.00 23.93 C ATOM 89 OH TYR 12 13.834 45.622 32.403 1.00 23.93 O ATOM 90 N VAL 13 8.434 44.943 33.084 1.00 19.20 N ATOM 91 CA VAL 13 8.092 45.017 31.698 1.00 19.20 C ATOM 92 C VAL 13 8.736 43.849 31.037 1.00 19.20 C ATOM 93 O VAL 13 8.272 43.375 30.004 1.00 19.20 O ATOM 94 CB VAL 13 6.733 44.569 32.149 1.00 19.20 C ATOM 95 CG1 VAL 13 6.902 43.361 33.085 1.00 19.20 C ATOM 96 CG2 VAL 13 6.009 45.765 32.791 1.00 19.20 C ATOM 97 N ALA 14 9.848 43.360 31.615 1.00 19.30 N ATOM 98 CA ALA 14 10.479 42.232 31.008 1.00 19.30 C ATOM 99 C ALA 14 9.551 41.072 31.128 1.00 19.30 C ATOM 100 O ALA 14 9.794 40.001 30.573 1.00 19.30 O ATOM 101 CB ALA 14 10.323 42.800 29.587 1.00 19.30 C ATOM 102 N GLU 15 8.462 41.264 31.892 1.00 16.55 N ATOM 103 CA GLU 15 7.457 40.257 32.024 1.00 16.55 C ATOM 104 C GLU 15 6.854 40.133 30.667 1.00 16.55 C ATOM 105 O GLU 15 5.699 39.733 30.531 1.00 16.55 O ATOM 106 CB GLU 15 7.920 38.858 32.470 1.00 16.55 C ATOM 107 CG GLU 15 9.208 38.383 31.791 1.00 16.55 C ATOM 108 CD GLU 15 8.860 37.856 30.406 1.00 16.55 C ATOM 109 OE1 GLU 15 7.667 37.522 30.184 1.00 16.55 O ATOM 110 OE2 GLU 15 9.788 37.771 29.558 1.00 16.55 O ATOM 111 N THR 16 7.608 40.500 29.615 1.00 12.17 N ATOM 112 CA THR 16 7.025 40.403 28.313 1.00 12.17 C ATOM 113 C THR 16 6.943 38.963 27.939 1.00 12.17 C ATOM 114 O THR 16 7.198 38.582 26.798 1.00 12.17 O ATOM 115 CB THR 16 5.646 40.839 28.708 1.00 12.17 C ATOM 116 OG1 THR 16 5.261 40.211 29.922 1.00 12.17 O ATOM 117 CG2 THR 16 4.666 40.472 27.581 1.00 12.17 C ATOM 118 N GLY 17 6.594 38.123 28.931 1.00 11.94 N ATOM 119 CA GLY 17 6.430 36.721 28.700 1.00 11.94 C ATOM 120 C GLY 17 5.131 36.502 27.998 1.00 11.94 C ATOM 121 O GLY 17 5.059 36.618 26.776 1.00 11.94 O ATOM 122 N GLN 18 4.064 36.177 28.748 1.00 12.01 N ATOM 123 CA GLN 18 2.816 35.972 28.077 1.00 12.01 C ATOM 124 C GLN 18 2.765 36.895 26.904 1.00 12.01 C ATOM 125 O GLN 18 2.011 36.677 25.958 1.00 12.01 O ATOM 126 CB GLN 18 3.986 34.999 27.850 1.00 12.01 C ATOM 127 CG GLN 18 5.360 35.670 27.911 1.00 12.01 C ATOM 128 CD GLN 18 5.594 36.107 29.351 1.00 12.01 C ATOM 129 OE1 GLN 18 4.885 36.964 29.874 1.00 12.01 O ATOM 130 NE2 GLN 18 6.612 35.497 30.015 1.00 12.01 N ATOM 131 N ASN 19 3.565 37.975 26.960 1.00 8.13 N ATOM 132 CA ASN 19 3.616 38.907 25.873 1.00 8.13 C ATOM 133 C ASN 19 3.352 38.114 24.638 1.00 8.13 C ATOM 134 O ASN 19 2.932 38.661 23.620 1.00 8.13 O ATOM 135 CB ASN 19 2.351 38.826 26.748 1.00 8.13 C ATOM 136 CG ASN 19 2.275 37.443 27.382 1.00 8.13 C ATOM 137 OD1 ASN 19 3.196 36.637 27.266 1.00 8.13 O ATOM 138 ND2 ASN 19 1.142 37.159 28.076 1.00 8.13 N ATOM 139 N TRP 20 3.618 36.797 24.685 1.00 7.56 N ATOM 140 CA TRP 20 3.366 35.990 23.529 1.00 7.56 C ATOM 141 C TRP 20 2.021 36.373 23.017 1.00 7.56 C ATOM 142 O TRP 20 1.757 36.292 21.819 1.00 7.56 O ATOM 143 CB TRP 20 4.354 37.072 23.057 1.00 7.56 C ATOM 144 CG TRP 20 4.070 38.461 23.583 1.00 7.56 C ATOM 145 CD1 TRP 20 3.287 38.856 24.628 1.00 7.56 C ATOM 146 CD2 TRP 20 4.605 39.659 23.001 1.00 7.56 C ATOM 147 NE1 TRP 20 3.302 40.228 24.732 1.00 7.56 N ATOM 148 CE2 TRP 20 4.109 40.733 23.736 1.00 7.56 C ATOM 149 CE3 TRP 20 5.439 39.848 21.935 1.00 7.56 C ATOM 150 CZ2 TRP 20 4.441 42.021 23.416 1.00 7.56 C ATOM 151 CZ3 TRP 20 5.775 41.146 21.617 1.00 7.56 C ATOM 152 CH2 TRP 20 5.283 42.211 22.343 1.00 7.56 C ATOM 153 N ALA 21 1.125 36.780 23.930 1.00 8.95 N ATOM 154 CA ALA 21 -0.174 37.210 23.510 1.00 8.95 C ATOM 155 C ALA 21 -0.005 37.832 22.168 1.00 8.95 C ATOM 156 O ALA 21 -0.945 37.886 21.373 1.00 8.95 O ATOM 157 CB ALA 21 0.356 35.771 23.412 1.00 8.95 C ATOM 158 N SER 22 1.203 38.347 21.886 1.00 14.42 N ATOM 159 CA SER 22 1.421 38.911 20.593 1.00 14.42 C ATOM 160 C SER 22 0.710 38.045 19.612 1.00 14.42 C ATOM 161 O SER 22 0.430 38.455 18.487 1.00 14.42 O ATOM 162 CB SER 22 0.357 39.774 21.291 1.00 14.42 C ATOM 163 OG SER 22 0.954 40.562 22.309 1.00 14.42 O ATOM 164 N LEU 23 0.424 36.797 20.021 1.00 17.36 N ATOM 165 CA LEU 23 -0.305 35.903 19.179 1.00 17.36 C ATOM 166 C LEU 23 -1.620 36.559 18.947 1.00 17.36 C ATOM 167 O LEU 23 -2.442 36.050 18.187 1.00 17.36 O ATOM 168 CB LEU 23 0.627 36.338 18.037 1.00 17.36 C ATOM 169 CG LEU 23 2.046 35.748 18.143 1.00 17.36 C ATOM 170 CD1 LEU 23 2.779 36.274 19.388 1.00 17.36 C ATOM 171 CD2 LEU 23 2.018 34.213 18.070 1.00 17.36 C ATOM 172 N ALA 24 -1.876 37.700 19.612 1.00 16.30 N ATOM 173 CA ALA 24 -3.132 38.329 19.353 1.00 16.30 C ATOM 174 C ALA 24 -3.248 38.369 17.870 1.00 16.30 C ATOM 175 O ALA 24 -4.346 38.497 17.329 1.00 16.30 O ATOM 176 CB ALA 24 -3.597 36.941 19.830 1.00 16.30 C ATOM 177 N ALA 25 -2.107 38.289 17.165 1.00 16.60 N ATOM 178 CA ALA 25 -2.187 38.352 15.740 1.00 16.60 C ATOM 179 C ALA 25 -3.314 37.483 15.304 1.00 16.60 C ATOM 180 O ALA 25 -3.747 37.526 14.155 1.00 16.60 O ATOM 181 CB ALA 25 -2.801 39.670 16.246 1.00 16.60 C ATOM 182 N ASN 26 -3.800 36.642 16.233 1.00 23.50 N ATOM 183 CA ASN 26 -4.916 35.800 15.941 1.00 23.50 C ATOM 184 C ASN 26 -6.063 36.717 15.696 1.00 23.50 C ATOM 185 O ASN 26 -7.018 36.356 15.012 1.00 23.50 O ATOM 186 CB ASN 26 -3.862 36.077 14.857 1.00 23.50 C ATOM 187 CG ASN 26 -2.648 35.213 15.164 1.00 23.50 C ATOM 188 OD1 ASN 26 -2.211 34.416 14.335 1.00 23.50 O ATOM 189 ND2 ASN 26 -2.085 35.374 16.392 1.00 23.50 N ATOM 190 N GLU 27 -6.012 37.929 16.275 1.00 31.01 N ATOM 191 CA GLU 27 -7.081 38.849 16.040 1.00 31.01 C ATOM 192 C GLU 27 -7.388 38.786 14.581 1.00 31.01 C ATOM 193 O GLU 27 -8.487 39.141 14.157 1.00 31.01 O ATOM 194 CB GLU 27 -7.541 37.532 16.686 1.00 31.01 C ATOM 195 CG GLU 27 -9.037 37.261 16.512 1.00 31.01 C ATOM 196 CD GLU 27 -9.352 35.937 17.192 1.00 31.01 C ATOM 197 OE1 GLU 27 -8.391 35.283 17.680 1.00 31.01 O ATOM 198 OE2 GLU 27 -10.554 35.562 17.236 1.00 31.01 O ATOM 199 N LEU 28 -6.411 38.345 13.769 1.00 21.43 N ATOM 200 CA LEU 28 -6.676 38.276 12.365 1.00 21.43 C ATOM 201 C LEU 28 -7.971 37.567 12.181 1.00 21.43 C ATOM 202 O LEU 28 -8.705 37.810 11.225 1.00 21.43 O ATOM 203 CB LEU 28 -7.016 39.767 12.544 1.00 21.43 C ATOM 204 CG LEU 28 -7.906 40.030 13.775 1.00 21.43 C ATOM 205 CD1 LEU 28 -7.168 39.678 15.078 1.00 21.43 C ATOM 206 CD2 LEU 28 -8.462 41.462 13.775 1.00 21.43 C ATOM 207 N ARG 29 -8.267 36.635 13.105 1.00 27.96 N ATOM 208 CA ARG 29 -9.516 35.947 13.073 1.00 27.96 C ATOM 209 C ARG 29 -10.543 36.953 13.451 1.00 27.96 C ATOM 210 O ARG 29 -11.692 36.605 13.721 1.00 27.96 O ATOM 211 CB ARG 29 -9.501 35.899 11.536 1.00 27.96 C ATOM 212 CG ARG 29 -10.861 35.556 10.922 1.00 27.96 C ATOM 213 CD ARG 29 -10.936 35.805 9.414 1.00 27.96 C ATOM 214 NE ARG 29 -9.650 35.354 8.816 1.00 27.96 N ATOM 215 CZ ARG 29 -9.603 34.953 7.512 1.00 27.96 C ATOM 216 NH1 ARG 29 -10.751 34.893 6.774 1.00 27.96 N ATOM 217 NH2 ARG 29 -8.408 34.615 6.947 1.00 27.96 N ATOM 218 N VAL 30 -10.156 38.236 13.503 1.00 32.86 N ATOM 219 CA VAL 30 -11.168 39.197 13.797 1.00 32.86 C ATOM 220 C VAL 30 -11.745 39.554 12.475 1.00 32.86 C ATOM 221 O VAL 30 -11.428 40.602 11.911 1.00 32.86 O ATOM 222 CB VAL 30 -11.176 40.435 14.640 1.00 32.86 C ATOM 223 CG1 VAL 30 -12.621 40.949 14.746 1.00 32.86 C ATOM 224 CG2 VAL 30 -10.532 40.104 15.996 1.00 32.86 C ATOM 225 N THR 31 -12.603 38.673 11.932 1.00106.10 N ATOM 226 CA THR 31 -13.167 38.987 10.660 1.00106.10 C ATOM 227 C THR 31 -13.783 40.342 10.753 1.00106.10 C ATOM 228 O THR 31 -14.120 40.977 9.755 1.00106.10 O ATOM 229 CB THR 31 -12.463 38.813 9.336 1.00106.10 C ATOM 230 OG1 THR 31 -11.456 39.801 9.181 1.00106.10 O ATOM 231 CG2 THR 31 -13.467 38.851 8.170 1.00106.10 C ATOM 232 N GLU 32 -13.946 40.827 11.995 1.00297.00 N ATOM 233 CA GLU 32 -14.470 42.145 12.153 1.00297.00 C ATOM 234 C GLU 32 -13.294 42.960 12.553 1.00297.00 C ATOM 235 O GLU 32 -13.265 44.174 12.350 1.00297.00 O ATOM 236 CB GLU 32 -14.947 42.622 10.768 1.00297.00 C ATOM 237 CG GLU 32 -16.128 41.809 10.232 1.00297.00 C ATOM 238 CD GLU 32 -16.532 42.352 8.866 1.00297.00 C ATOM 239 OE1 GLU 32 -15.837 43.271 8.357 1.00297.00 O ATOM 240 OE2 GLU 32 -17.549 41.851 8.317 1.00297.00 O ATOM 241 N ARG 33 -12.290 42.303 13.154 1.00 49.64 N ATOM 242 CA ARG 33 -11.151 43.032 13.607 1.00 49.64 C ATOM 243 C ARG 33 -10.169 43.056 12.493 1.00 49.64 C ATOM 244 O ARG 33 -9.694 42.024 12.025 1.00 49.64 O ATOM 245 CB ARG 33 -10.340 42.986 14.913 1.00 49.64 C ATOM 246 CG ARG 33 -9.453 44.215 15.114 1.00 49.64 C ATOM 247 CD ARG 33 -10.248 45.483 15.418 1.00 49.64 C ATOM 248 NE ARG 33 -9.308 46.638 15.377 1.00 49.64 N ATOM 249 CZ ARG 33 -8.647 47.026 16.506 1.00 49.64 C ATOM 250 NH1 ARG 33 -8.822 46.340 17.673 1.00 49.64 N ATOM 251 NH2 ARG 33 -7.809 48.102 16.467 1.00 49.64 N ATOM 252 N PRO 34 -9.896 44.239 12.038 1.00 31.48 N ATOM 253 CA PRO 34 -8.915 44.451 11.018 1.00 31.48 C ATOM 254 C PRO 34 -7.731 43.629 11.389 1.00 31.48 C ATOM 255 O PRO 34 -7.478 43.452 12.579 1.00 31.48 O ATOM 256 CB PRO 34 -10.252 43.700 11.022 1.00 31.48 C ATOM 257 CG PRO 34 -10.578 43.470 9.532 1.00 31.48 C ATOM 258 CD PRO 34 -9.857 44.623 8.818 1.00 31.48 C ATOM 259 N PHE 35 -7.020 43.104 10.368 1.00 22.20 N ATOM 260 CA PHE 35 -5.836 42.314 10.543 1.00 22.20 C ATOM 261 C PHE 35 -4.734 42.963 9.787 1.00 22.20 C ATOM 262 O PHE 35 -4.966 43.681 8.816 1.00 22.20 O ATOM 263 CB PHE 35 -5.788 40.804 10.251 1.00 22.20 C ATOM 264 CG PHE 35 -6.733 40.145 11.193 1.00 22.20 C ATOM 265 CD1 PHE 35 -8.076 40.101 10.909 1.00 22.20 C ATOM 266 CD2 PHE 35 -6.272 39.571 12.355 1.00 22.20 C ATOM 267 CE1 PHE 35 -8.954 39.495 11.776 1.00 22.20 C ATOM 268 CE2 PHE 35 -7.145 38.963 13.225 1.00 22.20 C ATOM 269 CZ PHE 35 -8.488 38.924 12.934 1.00 22.20 C ATOM 270 N TRP 36 -3.489 42.735 10.237 1.00 32.70 N ATOM 271 CA TRP 36 -2.394 43.289 9.511 1.00 32.70 C ATOM 272 C TRP 36 -2.279 42.421 8.305 1.00 32.70 C ATOM 273 O TRP 36 -1.660 41.360 8.344 1.00 32.70 O ATOM 274 CB TRP 36 -1.123 43.069 10.349 1.00 32.70 C ATOM 275 CG TRP 36 -1.104 43.821 11.661 1.00 32.70 C ATOM 276 CD1 TRP 36 -1.573 43.424 12.880 1.00 32.70 C ATOM 277 CD2 TRP 36 -0.549 45.134 11.850 1.00 32.70 C ATOM 278 NE1 TRP 36 -1.347 44.406 13.815 1.00 32.70 N ATOM 279 CE2 TRP 36 -0.717 45.463 13.193 1.00 32.70 C ATOM 280 CE3 TRP 36 0.051 45.992 10.974 1.00 32.70 C ATOM 281 CZ2 TRP 36 -0.286 46.663 13.685 1.00 32.70 C ATOM 282 CZ3 TRP 36 0.484 47.201 11.472 1.00 32.70 C ATOM 283 CH2 TRP 36 0.320 47.529 12.802 1.00 32.70 C ATOM 284 N ILE 37 -2.883 42.862 7.188 1.00 55.83 N ATOM 285 CA ILE 37 -2.844 42.072 5.997 1.00 55.83 C ATOM 286 C ILE 37 -1.442 41.617 5.845 1.00 55.83 C ATOM 287 O ILE 37 -1.153 40.699 5.081 1.00 55.83 O ATOM 288 CB ILE 37 -3.479 41.238 7.068 1.00 55.83 C ATOM 289 CG1 ILE 37 -4.933 41.687 7.287 1.00 55.83 C ATOM 290 CG2 ILE 37 -2.604 41.329 8.330 1.00 55.83 C ATOM 291 CD1 ILE 37 -5.060 43.155 7.695 1.00 55.83 C ATOM 292 N SER 38 -0.513 42.271 6.563 1.00297.00 N ATOM 293 CA SER 38 0.839 41.861 6.378 1.00297.00 C ATOM 294 C SER 38 1.384 41.399 7.681 1.00297.00 C ATOM 295 O SER 38 1.040 41.916 8.743 1.00297.00 O ATOM 296 CB SER 38 1.751 42.989 5.865 1.00297.00 C ATOM 297 OG SER 38 1.819 44.033 6.826 1.00297.00 O ATOM 298 N SER 39 2.256 40.377 7.609 1.00297.00 N ATOM 299 CA SER 39 2.914 39.869 8.769 1.00297.00 C ATOM 300 C SER 39 3.936 40.895 9.093 1.00297.00 C ATOM 301 O SER 39 4.137 41.833 8.324 1.00297.00 O ATOM 302 CB SER 39 3.650 38.541 8.519 1.00297.00 C ATOM 303 OG SER 39 4.281 38.098 9.712 1.00297.00 O ATOM 304 N PHE 40 4.603 40.773 10.254 1.00297.00 N ATOM 305 CA PHE 40 5.560 41.789 10.547 1.00297.00 C ATOM 306 C PHE 40 6.912 41.170 10.597 1.00297.00 C ATOM 307 O PHE 40 7.055 39.964 10.794 1.00297.00 O ATOM 308 CB PHE 40 5.258 42.544 11.843 1.00297.00 C ATOM 309 CG PHE 40 3.948 43.174 11.534 1.00297.00 C ATOM 310 CD1 PHE 40 3.889 44.236 10.660 1.00297.00 C ATOM 311 CD2 PHE 40 2.781 42.666 12.053 1.00297.00 C ATOM 312 CE1 PHE 40 2.683 44.817 10.355 1.00297.00 C ATOM 313 CE2 PHE 40 1.572 43.246 11.749 1.00297.00 C ATOM 314 CZ PHE 40 1.521 44.327 10.903 1.00297.00 C ATOM 315 N ILE 41 7.948 42.005 10.389 1.00170.06 N ATOM 316 CA ILE 41 9.285 41.506 10.295 1.00170.06 C ATOM 317 C ILE 41 10.161 42.255 11.241 1.00170.06 C ATOM 318 O ILE 41 9.811 43.325 11.735 1.00170.06 O ATOM 319 CB ILE 41 9.879 41.685 8.927 1.00170.06 C ATOM 320 CG1 ILE 41 11.204 40.918 8.807 1.00170.06 C ATOM 321 CG2 ILE 41 9.996 43.196 8.656 1.00170.06 C ATOM 322 CD1 ILE 41 11.720 40.807 7.373 1.00170.06 C ATOM 323 N GLY 42 11.331 41.659 11.529 1.00 99.46 N ATOM 324 CA GLY 42 12.325 42.238 12.375 1.00 99.46 C ATOM 325 C GLY 42 12.802 43.491 11.719 1.00 99.46 C ATOM 326 O GLY 42 13.157 44.458 12.385 1.00 99.46 O ATOM 327 N ARG 43 12.844 43.511 10.376 1.00100.13 N ATOM 328 CA ARG 43 13.348 44.668 9.694 1.00100.13 C ATOM 329 C ARG 43 12.529 45.849 10.090 1.00100.13 C ATOM 330 O ARG 43 11.409 45.716 10.583 1.00100.13 O ATOM 331 CB ARG 43 13.291 44.549 8.162 1.00100.13 C ATOM 332 CG ARG 43 14.224 43.472 7.606 1.00100.13 C ATOM 333 CD ARG 43 14.177 43.340 6.084 1.00100.13 C ATOM 334 NE ARG 43 14.717 44.604 5.508 1.00100.13 N ATOM 335 CZ ARG 43 16.065 44.770 5.373 1.00100.13 C ATOM 336 NH1 ARG 43 16.916 43.775 5.759 1.00100.13 N ATOM 337 NH2 ARG 43 16.562 45.931 4.859 1.00100.13 N ATOM 338 N SER 44 13.104 47.057 9.926 1.00297.00 N ATOM 339 CA SER 44 12.373 48.229 10.289 1.00297.00 C ATOM 340 C SER 44 11.146 48.231 9.450 1.00297.00 C ATOM 341 O SER 44 11.207 48.079 8.231 1.00297.00 O ATOM 342 CB SER 44 13.124 49.539 9.996 1.00297.00 C ATOM 343 OG SER 44 13.267 49.704 8.593 1.00297.00 O ATOM 344 N LYS 45 9.983 48.415 10.096 1.00 44.39 N ATOM 345 CA LYS 45 8.759 48.377 9.362 1.00 44.39 C ATOM 346 C LYS 45 8.190 49.756 9.370 1.00 44.39 C ATOM 347 O LYS 45 8.526 50.574 10.224 1.00 44.39 O ATOM 348 CB LYS 45 7.713 47.448 10.003 1.00 44.39 C ATOM 349 CG LYS 45 6.583 47.012 9.068 1.00 44.39 C ATOM 350 CD LYS 45 7.036 46.018 7.998 1.00 44.39 C ATOM 351 CE LYS 45 5.879 45.345 7.259 1.00 44.39 C ATOM 352 NZ LYS 45 5.179 46.335 6.413 1.00 44.39 N TER 1816 LEU 249 END