####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS145_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 41 2 - 42 4.93 6.35 LCS_AVERAGE: 90.39 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 19 - 32 1.89 7.53 LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.66 8.66 LCS_AVERAGE: 22.57 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.94 8.27 LCS_AVERAGE: 17.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 41 3 3 4 6 14 15 16 16 20 23 28 31 36 38 39 41 41 42 42 42 LCS_GDT V 3 V 3 5 7 41 3 7 7 11 14 15 16 16 21 23 30 32 36 38 39 41 41 42 42 42 LCS_GDT Q 4 Q 4 6 7 41 3 7 7 11 14 15 16 17 21 23 30 32 36 38 39 41 41 42 42 42 LCS_GDT G 5 G 5 6 7 41 3 7 7 11 14 15 16 18 22 27 30 33 36 38 39 41 41 42 42 42 LCS_GDT P 6 P 6 6 7 41 3 4 6 9 14 15 16 16 16 21 25 30 36 38 39 41 41 42 42 42 LCS_GDT W 7 W 7 6 7 41 3 4 6 11 14 15 16 17 22 27 31 33 36 38 39 41 41 42 42 42 LCS_GDT V 8 V 8 6 7 41 3 4 8 13 14 18 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT G 9 G 9 6 10 41 3 4 6 12 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT S 10 S 10 8 10 41 7 8 12 14 16 18 21 24 29 31 33 33 34 38 39 41 41 42 42 42 LCS_GDT S 11 S 11 8 10 41 7 8 8 12 16 19 22 25 29 31 33 33 35 38 39 41 41 42 42 42 LCS_GDT Y 12 Y 12 8 10 41 7 8 8 11 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT V 13 V 13 8 10 41 7 8 10 13 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT A 14 A 14 8 10 41 7 8 8 9 13 16 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT E 15 E 15 8 10 41 7 8 8 9 11 15 18 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT T 16 T 16 8 10 41 7 8 8 9 11 15 21 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT G 17 G 17 8 10 41 4 8 8 9 11 15 17 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT Q 18 Q 18 5 10 41 3 5 7 8 11 14 16 20 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT N 19 N 19 4 14 41 3 5 5 10 14 18 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT W 20 W 20 13 14 41 9 11 12 14 16 19 21 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT A 21 A 21 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT S 22 S 22 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT L 23 L 23 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT A 24 A 24 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT A 25 A 25 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT N 26 N 26 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT E 27 E 27 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT L 28 L 28 13 14 41 10 11 12 14 16 19 21 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT R 29 R 29 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT V 30 V 30 13 14 41 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT T 31 T 31 13 14 41 4 4 8 12 16 18 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT E 32 E 32 13 14 41 4 4 12 14 16 18 21 24 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT R 33 R 33 3 14 41 3 3 4 8 15 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT P 34 P 34 3 7 41 3 3 4 4 8 10 16 18 22 26 33 33 33 35 39 41 41 42 42 42 LCS_GDT F 35 F 35 3 7 41 3 5 6 7 14 15 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT W 36 W 36 5 7 41 4 7 7 11 14 15 17 20 23 30 33 33 34 35 39 41 41 42 42 42 LCS_GDT I 37 I 37 5 7 41 4 7 7 12 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT S 38 S 38 5 7 41 4 7 11 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT S 39 S 39 5 7 41 4 7 7 11 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT F 40 F 40 5 7 41 4 5 7 11 14 15 18 25 29 31 33 33 36 38 39 41 41 42 42 42 LCS_GDT I 41 I 41 5 7 41 4 4 7 11 14 15 17 24 26 31 31 33 36 38 39 41 41 42 42 42 LCS_GDT G 42 G 42 4 7 41 4 4 5 10 14 15 16 18 22 27 30 33 36 38 39 41 41 42 42 42 LCS_GDT R 43 R 43 4 5 39 4 4 4 5 5 5 7 11 16 19 20 24 27 33 37 41 41 42 42 42 LCS_GDT S 44 S 44 4 5 15 4 4 4 5 5 5 6 8 10 12 13 14 14 14 16 22 37 38 38 38 LCS_GDT K 45 K 45 0 5 15 0 0 3 5 5 5 6 7 10 12 12 14 14 14 15 17 18 20 21 21 LCS_AVERAGE LCS_A: 43.47 ( 17.46 22.57 90.39 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 11 12 14 16 19 22 25 29 31 33 33 36 38 39 41 41 42 42 42 GDT PERCENT_AT 22.73 25.00 27.27 31.82 36.36 43.18 50.00 56.82 65.91 70.45 75.00 75.00 81.82 86.36 88.64 93.18 93.18 95.45 95.45 95.45 GDT RMS_LOCAL 0.35 0.39 0.56 0.99 1.32 1.98 2.63 2.76 3.21 3.36 3.59 3.59 4.40 4.59 4.70 4.93 4.93 5.13 5.13 5.13 GDT RMS_ALL_AT 8.20 8.27 8.16 8.06 7.87 7.92 7.60 7.52 7.59 7.64 7.89 7.89 6.29 6.28 6.28 6.35 6.35 6.26 6.26 6.26 # Checking swapping # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 12.971 0 0.136 0.141 13.726 0.000 0.000 - LGA V 3 V 3 11.295 0 0.290 0.456 12.160 0.000 0.000 9.598 LGA Q 4 Q 4 12.850 0 0.464 0.835 15.290 0.000 0.000 14.380 LGA G 5 G 5 11.475 0 0.047 0.047 12.181 0.000 0.000 - LGA P 6 P 6 11.992 0 0.201 0.357 15.661 0.000 0.000 15.661 LGA W 7 W 7 8.692 0 0.222 0.974 12.110 0.000 0.130 6.898 LGA V 8 V 8 3.179 0 0.669 0.756 5.213 18.636 27.013 2.220 LGA G 9 G 9 2.014 0 0.455 0.455 4.056 38.182 38.182 - LGA S 10 S 10 4.673 0 0.662 0.849 7.535 21.364 14.242 7.535 LGA S 11 S 11 1.772 0 0.106 0.224 4.314 41.364 30.303 4.314 LGA Y 12 Y 12 2.856 0 0.042 0.864 10.227 42.727 14.697 10.227 LGA V 13 V 13 2.053 0 0.070 0.218 5.728 35.909 21.558 5.728 LGA A 14 A 14 4.874 0 0.034 0.034 7.161 5.000 4.364 - LGA E 15 E 15 6.217 0 0.039 1.268 7.894 0.455 0.202 6.272 LGA T 16 T 16 5.597 0 0.177 0.860 6.274 0.000 3.377 3.050 LGA G 17 G 17 6.742 0 0.570 0.570 7.638 0.000 0.000 - LGA Q 18 Q 18 6.773 0 0.653 0.815 14.507 0.000 0.000 11.000 LGA N 19 N 19 3.419 0 0.158 0.266 7.627 19.545 11.136 4.006 LGA W 20 W 20 3.191 0 0.643 1.329 9.937 37.273 10.649 9.937 LGA A 21 A 21 0.482 0 0.075 0.084 1.399 91.364 89.455 - LGA S 22 S 22 1.436 0 0.030 0.067 2.054 65.455 58.485 2.054 LGA L 23 L 23 1.928 0 0.086 0.148 4.183 54.545 35.000 4.183 LGA A 24 A 24 1.873 0 0.038 0.049 2.095 50.909 48.364 - LGA A 25 A 25 1.189 0 0.056 0.079 1.592 65.909 65.818 - LGA N 26 N 26 0.751 0 0.026 0.554 2.567 77.727 73.182 2.567 LGA E 27 E 27 1.661 0 0.086 1.415 7.575 45.455 27.071 7.575 LGA L 28 L 28 2.789 0 0.194 1.427 7.568 27.727 16.136 6.153 LGA R 29 R 29 2.584 0 0.279 1.446 5.170 22.273 11.405 5.048 LGA V 30 V 30 3.032 0 0.291 0.249 4.680 33.636 23.636 3.821 LGA T 31 T 31 4.223 0 0.113 1.118 7.217 6.364 3.636 7.140 LGA E 32 E 32 4.960 0 0.686 1.232 9.643 10.000 4.444 8.459 LGA R 33 R 33 2.846 0 0.053 0.915 8.276 13.636 6.446 8.276 LGA P 34 P 34 5.969 0 0.417 0.554 6.626 0.000 0.000 6.626 LGA F 35 F 35 4.002 0 0.539 1.257 11.171 1.818 1.653 11.171 LGA W 36 W 36 7.039 0 0.575 1.172 17.599 1.364 0.390 16.879 LGA I 37 I 37 2.634 0 0.195 0.976 4.566 44.091 29.545 4.372 LGA S 38 S 38 2.202 0 0.138 0.668 3.936 42.273 31.818 3.936 LGA S 39 S 39 2.415 0 0.242 0.743 5.656 32.727 27.879 3.417 LGA F 40 F 40 4.140 0 0.063 0.709 8.926 5.909 3.967 8.926 LGA I 41 I 41 6.532 0 0.627 0.526 9.621 0.455 0.227 7.078 LGA G 42 G 42 10.131 0 0.079 0.079 13.775 0.000 0.000 - LGA R 43 R 43 14.429 0 0.340 1.496 18.863 0.000 0.000 18.863 LGA S 44 S 44 18.100 0 0.293 0.309 21.044 0.000 0.000 17.699 LGA K 45 K 45 22.666 0 0.675 1.652 28.291 0.000 0.000 28.291 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.149 6.227 7.943 21.684 16.691 5.247 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 25 2.76 51.705 45.476 0.875 LGA_LOCAL RMSD: 2.756 Number of atoms: 25 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.522 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.149 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.694824 * X + -0.579455 * Y + -0.425971 * Z + 18.617256 Y_new = 0.382883 * X + -0.203335 * Y + 0.901141 * Z + -20.381363 Z_new = -0.608785 * X + -0.789232 * Y + 0.080582 * Z + 68.910629 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.503649 0.654528 -1.469048 [DEG: 28.8570 37.5017 -84.1702 ] ZXZ: -2.700021 1.490127 -2.484558 [DEG: -154.6998 85.3780 -142.3547 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS145_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 25 2.76 45.476 6.15 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS145_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 17 N ALA 2 8.647 39.832 2.085 1.00 3.07 ATOM 19 CA ALA 2 7.396 40.260 1.478 1.00 3.07 ATOM 21 CB ALA 2 7.496 41.635 0.824 1.00 3.07 ATOM 25 C ALA 2 6.779 39.226 0.542 1.00 3.07 ATOM 26 O ALA 2 7.393 38.678 -0.375 1.00 3.07 ATOM 27 N VAL 3 5.488 39.051 0.738 1.00 3.01 ATOM 29 CA VAL 3 4.596 38.278 -0.111 1.00 3.01 ATOM 31 CB VAL 3 4.060 37.088 0.707 1.00 3.01 ATOM 33 CG1 VAL 3 3.314 36.093 -0.163 1.00 3.01 ATOM 37 CG2 VAL 3 5.270 36.308 1.268 1.00 3.01 ATOM 41 C VAL 3 3.649 39.341 -0.703 1.00 3.01 ATOM 42 O VAL 3 4.060 40.487 -0.897 1.00 3.01 ATOM 43 N GLN 4 2.458 38.991 -1.159 1.00 3.43 ATOM 45 CA GLN 4 1.805 39.747 -2.230 1.00 3.43 ATOM 47 CB GLN 4 2.338 39.223 -3.545 1.00 3.43 ATOM 50 CG GLN 4 3.812 39.361 -3.935 1.00 3.43 ATOM 53 CD GLN 4 4.820 38.422 -3.319 1.00 3.43 ATOM 54 OE1 GLN 4 4.668 37.220 -3.236 1.00 3.43 ATOM 55 NE2 GLN 4 5.879 39.001 -2.801 1.00 3.43 ATOM 58 C GLN 4 0.295 39.602 -2.136 1.00 3.43 ATOM 59 O GLN 4 -0.352 39.307 -3.139 1.00 3.43 ATOM 60 N GLY 5 -0.202 39.680 -0.897 1.00 3.28 ATOM 62 CA GLY 5 -1.572 39.404 -0.484 1.00 3.28 ATOM 65 C GLY 5 -1.704 39.084 1.000 1.00 3.28 ATOM 66 O GLY 5 -0.693 38.751 1.609 1.00 3.28 ATOM 67 N PRO 6 -2.922 39.093 1.583 1.00 3.51 ATOM 68 CD PRO 6 -4.106 39.711 1.000 1.00 3.51 ATOM 71 CG PRO 6 -5.080 39.903 2.156 1.00 3.51 ATOM 74 CB PRO 6 -4.786 38.695 3.035 1.00 3.51 ATOM 77 CA PRO 6 -3.276 38.448 2.866 1.00 3.51 ATOM 79 C PRO 6 -2.968 36.940 2.982 1.00 3.51 ATOM 80 O PRO 6 -3.608 36.259 3.771 1.00 3.51 ATOM 81 N TRP 7 -1.987 36.417 2.248 1.00 2.90 ATOM 83 CA TRP 7 -1.252 35.192 2.522 1.00 2.90 ATOM 85 CB TRP 7 -1.539 34.101 1.480 1.00 2.90 ATOM 88 CG TRP 7 -1.028 32.742 1.851 1.00 2.90 ATOM 89 CD1 TRP 7 -1.766 31.789 2.460 1.00 2.90 ATOM 91 NE1 TRP 7 -0.994 30.669 2.684 1.00 2.90 ATOM 93 CE2 TRP 7 0.293 30.836 2.228 1.00 2.90 ATOM 94 CZ2 TRP 7 1.422 30.002 2.226 1.00 2.90 ATOM 96 CH2 TRP 7 2.613 30.468 1.643 1.00 2.90 ATOM 98 CZ3 TRP 7 2.655 31.750 1.067 1.00 2.90 ATOM 100 CE3 TRP 7 1.513 32.575 1.078 1.00 2.90 ATOM 102 CD2 TRP 7 0.302 32.150 1.667 1.00 2.90 ATOM 103 C TRP 7 0.204 35.603 2.576 1.00 2.90 ATOM 104 O TRP 7 0.859 35.787 1.550 1.00 2.90 ATOM 105 N VAL 8 0.661 35.899 3.789 1.00 2.48 ATOM 107 CA VAL 8 2.090 35.975 4.059 1.00 2.48 ATOM 109 CB VAL 8 2.305 36.539 5.464 1.00 2.48 ATOM 111 CG1 VAL 8 2.121 35.572 6.618 1.00 2.48 ATOM 115 CG2 VAL 8 3.682 37.164 5.562 1.00 2.48 ATOM 119 C VAL 8 2.644 34.561 3.921 1.00 2.48 ATOM 120 O VAL 8 1.980 33.602 4.291 1.00 2.48 ATOM 121 N GLY 9 3.885 34.432 3.480 1.00 3.18 ATOM 123 CA GLY 9 4.639 33.181 3.538 1.00 3.18 ATOM 126 C GLY 9 5.688 33.249 4.643 1.00 3.18 ATOM 127 O GLY 9 6.773 32.690 4.504 1.00 3.18 ATOM 128 N SER 10 5.388 33.998 5.714 1.00 2.58 ATOM 130 CA SER 10 6.252 34.108 6.889 1.00 2.58 ATOM 132 CB SER 10 5.660 35.013 7.971 1.00 2.58 ATOM 135 OG SER 10 6.628 35.227 8.980 1.00 2.58 ATOM 137 C SER 10 6.575 32.717 7.432 1.00 2.58 ATOM 138 O SER 10 5.782 31.789 7.273 1.00 2.58 ATOM 139 N SER 11 7.714 32.569 8.104 1.00 2.39 ATOM 141 CA SER 11 8.160 31.263 8.596 1.00 2.39 ATOM 143 CB SER 11 9.514 31.400 9.304 1.00 2.39 ATOM 146 OG SER 11 10.281 30.236 9.126 1.00 2.39 ATOM 148 C SER 11 7.103 30.615 9.498 1.00 2.39 ATOM 149 O SER 11 6.565 29.572 9.138 1.00 2.39 ATOM 150 N TYR 12 6.648 31.335 10.537 1.00 2.43 ATOM 152 CA TYR 12 5.556 30.911 11.435 1.00 2.43 ATOM 154 CB TYR 12 5.322 31.999 12.493 1.00 2.43 ATOM 157 CG TYR 12 4.311 31.709 13.592 1.00 2.43 ATOM 158 CD1 TYR 12 4.146 30.416 14.133 1.00 2.43 ATOM 160 CE1 TYR 12 3.204 30.187 15.156 1.00 2.43 ATOM 162 CZ TYR 12 2.457 31.259 15.686 1.00 2.43 ATOM 163 OH TYR 12 1.570 31.052 16.697 1.00 2.43 ATOM 165 CE2 TYR 12 2.658 32.556 15.175 1.00 2.43 ATOM 167 CD2 TYR 12 3.564 32.776 14.128 1.00 2.43 ATOM 169 C TYR 12 4.269 30.496 10.716 1.00 2.43 ATOM 170 O TYR 12 3.497 29.650 11.175 1.00 2.43 ATOM 171 N VAL 13 4.060 31.063 9.535 1.00 2.38 ATOM 173 CA VAL 13 2.871 30.848 8.732 1.00 2.38 ATOM 175 CB VAL 13 2.598 32.138 7.957 1.00 2.38 ATOM 177 CG1 VAL 13 1.728 31.883 6.735 1.00 2.38 ATOM 181 CG2 VAL 13 2.082 33.157 8.996 1.00 2.38 ATOM 185 C VAL 13 2.968 29.547 7.941 1.00 2.38 ATOM 186 O VAL 13 2.109 28.682 8.126 1.00 2.38 ATOM 187 N ALA 14 4.049 29.342 7.184 1.00 2.62 ATOM 189 CA ALA 14 4.319 28.055 6.545 1.00 2.62 ATOM 191 CB ALA 14 5.618 28.185 5.738 1.00 2.62 ATOM 195 C ALA 14 4.388 26.883 7.553 1.00 2.62 ATOM 196 O ALA 14 3.918 25.785 7.264 1.00 2.62 ATOM 197 N GLU 15 4.925 27.139 8.747 1.00 2.67 ATOM 199 CA GLU 15 5.009 26.206 9.883 1.00 2.67 ATOM 201 CB GLU 15 5.905 26.834 10.971 1.00 2.67 ATOM 204 CG GLU 15 7.398 26.891 10.597 1.00 2.67 ATOM 207 CD GLU 15 8.148 28.063 11.261 1.00 2.67 ATOM 208 OE1 GLU 15 9.120 28.552 10.635 1.00 2.67 ATOM 209 OE2 GLU 15 7.747 28.517 12.356 1.00 2.67 ATOM 210 C GLU 15 3.643 25.884 10.509 1.00 2.67 ATOM 211 O GLU 15 3.459 24.773 11.006 1.00 2.67 ATOM 212 N THR 16 2.669 26.809 10.470 1.00 2.68 ATOM 214 CA THR 16 1.426 26.675 11.266 1.00 2.68 ATOM 216 CB THR 16 1.404 27.605 12.497 1.00 2.68 ATOM 218 CG2 THR 16 0.676 26.959 13.677 1.00 2.68 ATOM 222 OG1 THR 16 2.695 27.850 12.994 1.00 2.68 ATOM 224 C THR 16 0.144 26.785 10.425 1.00 2.68 ATOM 225 O THR 16 -0.951 27.019 10.944 1.00 2.68 ATOM 226 N GLY 17 0.232 26.539 9.113 1.00 3.22 ATOM 228 CA GLY 17 -0.821 25.800 8.408 1.00 3.22 ATOM 231 C GLY 17 -1.527 26.563 7.287 1.00 3.22 ATOM 232 O GLY 17 -0.906 26.991 6.321 1.00 3.22 ATOM 233 N GLN 18 -2.850 26.716 7.424 1.00 3.80 ATOM 235 CA GLN 18 -3.682 27.690 6.684 1.00 3.80 ATOM 237 CB GLN 18 -4.461 27.040 5.527 1.00 3.80 ATOM 240 CG GLN 18 -3.591 26.712 4.287 1.00 3.80 ATOM 243 CD GLN 18 -3.123 27.920 3.458 1.00 3.80 ATOM 244 OE1 GLN 18 -3.009 29.049 3.910 1.00 3.80 ATOM 245 NE2 GLN 18 -2.849 27.745 2.184 1.00 3.80 ATOM 248 C GLN 18 -4.577 28.508 7.637 1.00 3.80 ATOM 249 O GLN 18 -4.910 29.654 7.359 1.00 3.80 ATOM 250 N ASN 19 -4.819 27.996 8.849 1.00 2.59 ATOM 252 CA ASN 19 -5.186 28.757 10.054 1.00 2.59 ATOM 254 CB ASN 19 -5.389 27.763 11.219 1.00 2.59 ATOM 257 CG ASN 19 -6.146 26.501 10.856 1.00 2.59 ATOM 258 OD1 ASN 19 -5.673 25.673 10.095 1.00 2.59 ATOM 259 ND2 ASN 19 -7.330 26.306 11.384 1.00 2.59 ATOM 262 C ASN 19 -4.106 29.761 10.496 1.00 2.59 ATOM 263 O ASN 19 -4.302 30.502 11.463 1.00 2.59 ATOM 264 N TRP 20 -2.950 29.747 9.828 1.00 2.22 ATOM 266 CA TRP 20 -1.780 30.554 10.147 1.00 2.22 ATOM 268 CB TRP 20 -0.781 30.433 9.001 1.00 2.22 ATOM 271 CG TRP 20 -1.256 31.001 7.701 1.00 2.22 ATOM 272 CD1 TRP 20 -1.502 30.307 6.580 1.00 2.22 ATOM 274 NE1 TRP 20 -2.086 31.128 5.640 1.00 2.22 ATOM 276 CE2 TRP 20 -2.031 32.443 6.029 1.00 2.22 ATOM 277 CZ2 TRP 20 -2.429 33.650 5.445 1.00 2.22 ATOM 279 CH2 TRP 20 -2.062 34.857 6.065 1.00 2.22 ATOM 281 CZ3 TRP 20 -1.333 34.836 7.255 1.00 2.22 ATOM 283 CE3 TRP 20 -1.026 33.623 7.879 1.00 2.22 ATOM 285 CD2 TRP 20 -1.394 32.395 7.299 1.00 2.22 ATOM 286 C TRP 20 -2.108 32.028 10.401 1.00 2.22 ATOM 287 O TRP 20 -1.441 32.657 11.211 1.00 2.22 ATOM 288 N ALA 21 -3.120 32.592 9.731 1.00 2.19 ATOM 290 CA ALA 21 -3.442 34.014 9.835 1.00 2.19 ATOM 292 CB ALA 21 -4.432 34.366 8.715 1.00 2.19 ATOM 296 C ALA 21 -4.062 34.335 11.196 1.00 2.19 ATOM 297 O ALA 21 -3.667 35.284 11.875 1.00 2.19 ATOM 298 N SER 22 -5.032 33.521 11.616 1.00 2.13 ATOM 300 CA SER 22 -5.671 33.697 12.912 1.00 2.13 ATOM 302 CB SER 22 -7.035 33.004 12.991 1.00 2.13 ATOM 305 OG SER 22 -6.968 31.618 12.726 1.00 2.13 ATOM 307 C SER 22 -4.752 33.302 14.071 1.00 2.13 ATOM 308 O SER 22 -4.771 33.955 15.122 1.00 2.13 ATOM 309 N LEU 23 -3.896 32.297 13.871 1.00 2.02 ATOM 311 CA LEU 23 -2.885 31.921 14.859 1.00 2.02 ATOM 313 CB LEU 23 -2.280 30.559 14.477 1.00 2.02 ATOM 316 CG LEU 23 -3.288 29.397 14.589 1.00 2.02 ATOM 318 CD1 LEU 23 -2.644 28.108 14.095 1.00 2.02 ATOM 322 CD2 LEU 23 -3.755 29.164 16.030 1.00 2.02 ATOM 326 C LEU 23 -1.812 33.002 15.061 1.00 2.02 ATOM 327 O LEU 23 -1.562 33.382 16.200 1.00 2.02 ATOM 328 N ALA 24 -1.234 33.560 13.995 1.00 1.69 ATOM 330 CA ALA 24 -0.278 34.665 14.089 1.00 1.69 ATOM 332 CB ALA 24 0.450 34.813 12.749 1.00 1.69 ATOM 336 C ALA 24 -0.901 35.984 14.591 1.00 1.69 ATOM 337 O ALA 24 -0.252 36.736 15.313 1.00 1.69 ATOM 338 N ALA 25 -2.174 36.276 14.290 1.00 1.32 ATOM 340 CA ALA 25 -2.864 37.421 14.891 1.00 1.32 ATOM 342 CB ALA 25 -4.239 37.570 14.225 1.00 1.32 ATOM 346 C ALA 25 -2.968 37.268 16.428 1.00 1.32 ATOM 347 O ALA 25 -2.504 38.134 17.190 1.00 1.32 ATOM 348 N ASN 26 -3.498 36.118 16.882 1.00 1.94 ATOM 350 CA ASN 26 -3.553 35.779 18.310 1.00 1.94 ATOM 352 CB ASN 26 -4.132 34.362 18.490 1.00 1.94 ATOM 355 CG ASN 26 -5.646 34.333 18.529 1.00 1.94 ATOM 356 OD1 ASN 26 -6.260 34.736 19.502 1.00 1.94 ATOM 357 ND2 ASN 26 -6.294 33.849 17.496 1.00 1.94 ATOM 360 C ASN 26 -2.176 35.881 18.992 1.00 1.94 ATOM 361 O ASN 26 -2.068 36.426 20.092 1.00 1.94 ATOM 362 N GLU 27 -1.122 35.385 18.345 1.00 2.33 ATOM 364 CA GLU 27 0.269 35.447 18.801 1.00 2.33 ATOM 366 CB GLU 27 1.121 34.561 17.885 1.00 2.33 ATOM 369 CG GLU 27 2.592 34.412 18.309 1.00 2.33 ATOM 372 CD GLU 27 3.503 35.515 17.750 1.00 2.33 ATOM 373 OE1 GLU 27 4.292 36.074 18.541 1.00 2.33 ATOM 374 OE2 GLU 27 3.404 35.790 16.533 1.00 2.33 ATOM 375 C GLU 27 0.820 36.879 18.900 1.00 2.33 ATOM 376 O GLU 27 1.501 37.164 19.887 1.00 2.33 ATOM 377 N LEU 28 0.430 37.811 18.014 1.00 1.96 ATOM 379 CA LEU 28 0.753 39.231 18.217 1.00 1.96 ATOM 381 CB LEU 28 0.398 40.073 16.975 1.00 1.96 ATOM 384 CG LEU 28 0.867 41.552 17.066 1.00 1.96 ATOM 386 CD1 LEU 28 2.386 41.721 17.111 1.00 1.96 ATOM 390 CD2 LEU 28 0.337 42.424 15.922 1.00 1.96 ATOM 394 C LEU 28 0.033 39.797 19.452 1.00 1.96 ATOM 395 O LEU 28 0.570 40.682 20.109 1.00 1.96 ATOM 396 N ARG 29 -1.191 39.301 19.706 1.00 2.11 ATOM 398 CA ARG 29 -2.245 39.735 20.665 1.00 2.11 ATOM 400 CB ARG 29 -1.845 40.812 21.716 1.00 2.11 ATOM 403 CG ARG 29 -0.845 40.509 22.847 1.00 2.11 ATOM 406 CD ARG 29 -1.192 39.320 23.754 1.00 2.11 ATOM 409 NE ARG 29 -1.060 38.016 23.084 1.00 2.11 ATOM 411 CZ ARG 29 0.033 37.478 22.575 1.00 2.11 ATOM 412 NH1 ARG 29 -0.057 36.339 21.975 1.00 2.11 ATOM 415 NH2 ARG 29 1.210 38.036 22.597 1.00 2.11 ATOM 418 C ARG 29 -3.441 40.327 19.934 1.00 2.11 ATOM 419 O ARG 29 -4.547 40.335 20.462 1.00 2.11 ATOM 420 N VAL 30 -3.203 40.879 18.746 1.00 1.66 ATOM 422 CA VAL 30 -4.188 41.612 17.945 1.00 1.66 ATOM 424 CB VAL 30 -3.523 42.657 17.023 1.00 1.66 ATOM 426 CG1 VAL 30 -4.564 43.665 16.519 1.00 1.66 ATOM 430 CG2 VAL 30 -2.466 43.486 17.770 1.00 1.66 ATOM 434 C VAL 30 -5.100 40.622 17.215 1.00 1.66 ATOM 435 O VAL 30 -5.170 40.616 15.993 1.00 1.66 ATOM 436 N THR 31 -5.786 39.756 17.971 1.00 2.38 ATOM 438 CA THR 31 -6.620 38.647 17.473 1.00 2.38 ATOM 440 CB THR 31 -7.356 37.976 18.642 1.00 2.38 ATOM 442 CG2 THR 31 -8.260 36.814 18.231 1.00 2.38 ATOM 446 OG1 THR 31 -6.389 37.483 19.537 1.00 2.38 ATOM 448 C THR 31 -7.608 39.055 16.377 1.00 2.38 ATOM 449 O THR 31 -7.859 38.291 15.452 1.00 2.38 ATOM 450 N GLU 32 -8.127 40.277 16.455 1.00 3.20 ATOM 452 CA GLU 32 -9.103 40.848 15.527 1.00 3.20 ATOM 454 CB GLU 32 -9.691 42.075 16.253 1.00 3.20 ATOM 457 CG GLU 32 -11.048 42.591 15.745 1.00 3.20 ATOM 460 CD GLU 32 -11.384 43.975 16.327 1.00 3.20 ATOM 461 OE1 GLU 32 -12.172 44.715 15.700 1.00 3.20 ATOM 462 OE2 GLU 32 -10.714 44.424 17.285 1.00 3.20 ATOM 463 C GLU 32 -8.540 41.277 14.160 1.00 3.20 ATOM 464 O GLU 32 -9.298 41.453 13.209 1.00 3.20 ATOM 465 N ARG 33 -7.220 41.493 14.033 1.00 2.78 ATOM 467 CA ARG 33 -6.606 42.098 12.838 1.00 2.78 ATOM 469 CB ARG 33 -6.326 43.600 13.050 1.00 2.78 ATOM 472 CG ARG 33 -7.617 44.398 13.278 1.00 2.78 ATOM 475 CD ARG 33 -7.369 45.895 13.513 1.00 2.78 ATOM 478 NE ARG 33 -8.652 46.598 13.707 1.00 2.78 ATOM 480 CZ ARG 33 -9.454 46.446 14.750 1.00 2.78 ATOM 481 NH1 ARG 33 -10.720 46.719 14.656 1.00 2.78 ATOM 484 NH2 ARG 33 -9.026 45.973 15.883 1.00 2.78 ATOM 487 C ARG 33 -5.331 41.367 12.418 1.00 2.78 ATOM 488 O ARG 33 -4.394 41.269 13.210 1.00 2.78 ATOM 489 N PRO 34 -5.202 40.984 11.135 1.00 2.83 ATOM 490 CD PRO 34 -6.265 40.980 10.131 1.00 2.83 ATOM 493 CG PRO 34 -5.612 40.639 8.798 1.00 2.83 ATOM 496 CB PRO 34 -4.368 39.868 9.216 1.00 2.83 ATOM 499 CA PRO 34 -3.946 40.522 10.544 1.00 2.83 ATOM 501 C PRO 34 -2.927 41.689 10.386 1.00 2.83 ATOM 502 O PRO 34 -2.582 42.119 9.278 1.00 2.83 ATOM 503 N PHE 35 -2.466 42.223 11.524 1.00 3.12 ATOM 505 CA PHE 35 -1.531 43.349 11.633 1.00 3.12 ATOM 507 CB PHE 35 -1.800 44.107 12.942 1.00 3.12 ATOM 510 CG PHE 35 -1.044 45.419 13.043 1.00 3.12 ATOM 511 CD1 PHE 35 -1.674 46.623 12.669 1.00 3.12 ATOM 513 CE1 PHE 35 -0.971 47.840 12.730 1.00 3.12 ATOM 515 CZ PHE 35 0.368 47.857 13.154 1.00 3.12 ATOM 517 CE2 PHE 35 1.002 46.658 13.523 1.00 3.12 ATOM 519 CD2 PHE 35 0.297 45.442 13.476 1.00 3.12 ATOM 521 C PHE 35 -0.077 42.856 11.546 1.00 3.12 ATOM 522 O PHE 35 0.659 43.270 10.651 1.00 3.12 ATOM 523 N TRP 36 0.293 41.874 12.383 1.00 3.08 ATOM 525 CA TRP 36 1.523 41.066 12.248 1.00 3.08 ATOM 527 CB TRP 36 1.455 39.910 13.261 1.00 3.08 ATOM 530 CG TRP 36 2.585 38.923 13.424 1.00 3.08 ATOM 531 CD1 TRP 36 3.144 38.656 14.630 1.00 3.08 ATOM 533 NE1 TRP 36 3.975 37.567 14.552 1.00 3.08 ATOM 535 CE2 TRP 36 4.048 37.084 13.275 1.00 3.08 ATOM 536 CZ2 TRP 36 4.730 35.990 12.729 1.00 3.08 ATOM 538 CH2 TRP 36 4.550 35.668 11.378 1.00 3.08 ATOM 540 CZ3 TRP 36 3.695 36.450 10.589 1.00 3.08 ATOM 542 CE3 TRP 36 3.013 37.543 11.155 1.00 3.08 ATOM 544 CD2 TRP 36 3.162 37.911 12.516 1.00 3.08 ATOM 545 C TRP 36 1.637 40.512 10.837 1.00 3.08 ATOM 546 O TRP 36 2.638 40.716 10.158 1.00 3.08 ATOM 547 N ILE 37 0.554 39.874 10.385 1.00 1.98 ATOM 549 CA ILE 37 0.404 39.273 9.063 1.00 1.98 ATOM 551 CB ILE 37 -1.005 38.671 8.933 1.00 1.98 ATOM 553 CG2 ILE 37 -1.366 38.366 7.469 1.00 1.98 ATOM 557 CG1 ILE 37 -1.206 37.405 9.794 1.00 1.98 ATOM 560 CD1 ILE 37 -1.177 37.622 11.307 1.00 1.98 ATOM 564 C ILE 37 0.712 40.327 8.003 1.00 1.98 ATOM 565 O ILE 37 1.642 40.120 7.247 1.00 1.98 ATOM 566 N SER 38 0.031 41.482 7.982 1.00 1.89 ATOM 568 CA SER 38 0.315 42.554 7.010 1.00 1.89 ATOM 570 CB SER 38 -0.585 43.775 7.259 1.00 1.89 ATOM 573 OG SER 38 -1.943 43.500 6.946 1.00 1.89 ATOM 575 C SER 38 1.784 43.018 6.978 1.00 1.89 ATOM 576 O SER 38 2.398 43.141 5.902 1.00 1.89 ATOM 577 N SER 39 2.342 43.214 8.177 1.00 2.04 ATOM 579 CA SER 39 3.721 43.660 8.391 1.00 2.04 ATOM 581 CB SER 39 4.039 43.774 9.891 1.00 2.04 ATOM 584 OG SER 39 3.100 44.589 10.568 1.00 2.04 ATOM 586 C SER 39 4.706 42.705 7.718 1.00 2.04 ATOM 587 O SER 39 5.505 43.123 6.885 1.00 2.04 ATOM 588 N PHE 40 4.578 41.399 7.983 1.00 2.09 ATOM 590 CA PHE 40 5.386 40.369 7.323 1.00 2.09 ATOM 592 CB PHE 40 5.341 39.061 8.130 1.00 2.09 ATOM 595 CG PHE 40 6.251 38.992 9.342 1.00 2.09 ATOM 596 CD1 PHE 40 5.781 39.351 10.619 1.00 2.09 ATOM 598 CE1 PHE 40 6.602 39.196 11.749 1.00 2.09 ATOM 600 CZ PHE 40 7.903 38.685 11.608 1.00 2.09 ATOM 602 CE2 PHE 40 8.384 38.334 10.333 1.00 2.09 ATOM 604 CD2 PHE 40 7.561 38.490 9.204 1.00 2.09 ATOM 606 C PHE 40 5.023 40.127 5.840 1.00 2.09 ATOM 607 O PHE 40 5.841 39.569 5.109 1.00 2.09 ATOM 608 N ILE 41 3.841 40.544 5.357 1.00 2.25 ATOM 610 CA ILE 41 3.523 40.574 3.914 1.00 2.25 ATOM 612 CB ILE 41 2.011 40.749 3.602 1.00 2.25 ATOM 614 CG2 ILE 41 1.705 40.819 2.091 1.00 2.25 ATOM 618 CG1 ILE 41 1.216 39.548 4.128 1.00 2.25 ATOM 621 CD1 ILE 41 -0.270 39.796 4.388 1.00 2.25 ATOM 625 C ILE 41 4.356 41.663 3.243 1.00 2.25 ATOM 626 O ILE 41 4.576 41.570 2.043 1.00 2.25 ATOM 627 N GLY 42 4.790 42.694 3.976 1.00 2.71 ATOM 629 CA GLY 42 5.310 43.917 3.356 1.00 2.71 ATOM 632 C GLY 42 4.171 44.904 3.067 1.00 2.71 ATOM 633 O GLY 42 4.398 46.096 2.860 1.00 2.71 ATOM 634 N ARG 43 2.922 44.421 3.121 1.00 3.43 ATOM 636 CA ARG 43 1.715 45.138 2.707 1.00 3.43 ATOM 638 CB ARG 43 0.682 44.103 2.216 1.00 3.43 ATOM 641 CG ARG 43 -0.585 44.714 1.613 1.00 3.43 ATOM 644 CD ARG 43 -1.723 43.705 1.428 1.00 3.43 ATOM 647 NE ARG 43 -2.528 43.584 2.658 1.00 3.43 ATOM 649 CZ ARG 43 -3.844 43.590 2.780 1.00 3.43 ATOM 650 NH1 ARG 43 -4.362 43.420 3.967 1.00 3.43 ATOM 653 NH2 ARG 43 -4.660 43.738 1.773 1.00 3.43 ATOM 656 C ARG 43 1.231 45.974 3.887 1.00 3.43 ATOM 657 O ARG 43 0.237 45.633 4.535 1.00 3.43 ATOM 658 N SER 44 1.902 47.100 4.126 1.00 5.26 ATOM 660 CA SER 44 1.280 48.298 4.713 1.00 5.26 ATOM 662 CB SER 44 2.308 49.431 4.874 1.00 5.26 ATOM 665 OG SER 44 3.335 49.043 5.765 1.00 5.26 ATOM 667 C SER 44 0.141 48.701 3.786 1.00 5.26 ATOM 668 O SER 44 0.343 49.605 2.991 1.00 5.26 ATOM 669 N LYS 45 -0.990 47.963 3.811 1.00 7.53 ATOM 671 CA LYS 45 -2.072 47.877 2.791 1.00 7.53 ATOM 673 CB LYS 45 -3.217 46.982 3.323 1.00 7.53 ATOM 676 CG LYS 45 -4.288 47.716 4.176 1.00 7.53 ATOM 679 CD LYS 45 -5.593 48.021 3.399 1.00 7.53 ATOM 682 CE LYS 45 -6.235 49.393 3.678 1.00 7.53 ATOM 685 NZ LYS 45 -5.471 50.514 3.082 1.00 7.53 ATOM 689 C LYS 45 -2.627 49.231 2.335 1.00 7.53 ATOM 690 O LYS 45 -3.504 49.290 1.499 1.00 7.53 TER END