####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS145_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 8 - 43 4.88 6.83 LCS_AVERAGE: 76.60 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 19 20 - 38 1.95 8.13 LCS_AVERAGE: 31.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.55 7.49 LCS_AVERAGE: 17.41 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 13 0 4 5 6 13 19 20 24 25 27 29 31 34 36 37 38 38 39 39 41 LCS_GDT V 3 V 3 4 8 24 4 10 15 18 20 22 23 24 25 27 29 31 35 36 37 38 38 39 40 41 LCS_GDT Q 4 Q 4 5 8 24 3 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT G 5 G 5 5 8 24 3 4 6 10 12 13 19 22 24 26 28 31 35 35 36 38 38 39 40 41 LCS_GDT P 6 P 6 5 8 24 3 4 5 10 12 13 13 15 17 26 28 29 30 30 33 35 38 39 40 41 LCS_GDT W 7 W 7 5 8 24 3 4 5 10 10 13 13 14 17 19 28 29 30 30 33 33 33 39 40 41 LCS_GDT V 8 V 8 5 12 36 3 4 5 9 11 13 22 24 25 27 29 31 35 35 37 38 38 39 40 41 LCS_GDT G 9 G 9 9 12 36 5 9 12 12 14 15 20 23 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT S 10 S 10 9 12 36 6 9 9 11 11 12 15 18 23 26 27 32 35 36 37 38 38 39 40 41 LCS_GDT S 11 S 11 9 12 36 6 9 9 11 11 12 17 19 23 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT Y 12 Y 12 9 12 36 6 9 9 11 11 16 19 21 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT V 13 V 13 9 12 36 6 9 9 11 11 12 16 19 23 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT A 14 A 14 9 12 36 6 9 9 11 11 12 16 19 22 23 26 30 33 36 37 38 38 39 40 41 LCS_GDT E 15 E 15 9 12 36 6 9 9 11 11 12 16 19 22 22 25 29 33 35 37 38 38 39 40 41 LCS_GDT T 16 T 16 9 12 36 6 9 9 11 11 12 16 19 22 22 27 32 35 36 37 38 38 39 40 41 LCS_GDT G 17 G 17 9 12 36 6 9 9 11 11 12 16 19 23 26 27 32 35 36 37 38 38 39 40 41 LCS_GDT Q 18 Q 18 9 12 36 3 3 8 11 11 12 16 19 23 26 29 32 35 36 37 38 38 39 40 41 LCS_GDT N 19 N 19 4 13 36 3 3 4 4 9 12 16 19 23 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT W 20 W 20 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT A 21 A 21 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT S 22 S 22 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT L 23 L 23 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT A 24 A 24 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT A 25 A 25 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT N 26 N 26 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT E 27 E 27 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT L 28 L 28 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT R 29 R 29 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT V 30 V 30 12 19 36 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT T 31 T 31 12 19 36 3 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT E 32 E 32 4 19 36 3 5 6 6 7 15 23 24 25 27 29 31 35 36 37 38 38 39 40 41 LCS_GDT R 33 R 33 4 19 36 3 9 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT P 34 P 34 4 19 36 2 5 6 14 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT F 35 F 35 4 19 36 0 3 11 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT W 36 W 36 6 19 36 4 5 6 8 13 18 22 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT I 37 I 37 6 19 36 4 5 6 15 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT S 38 S 38 6 19 36 4 5 11 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT S 39 S 39 6 9 36 4 5 6 15 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT F 40 F 40 6 9 36 4 5 6 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT I 41 I 41 6 9 36 4 5 6 14 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT G 42 G 42 6 9 36 3 4 6 10 12 19 21 24 25 27 29 32 35 36 37 38 38 39 40 41 LCS_GDT R 43 R 43 4 5 36 3 4 4 6 7 8 11 13 14 15 19 22 30 33 36 36 38 39 39 40 LCS_GDT S 44 S 44 4 5 28 0 4 4 5 5 8 11 11 14 15 16 18 20 21 24 27 29 31 33 35 LCS_GDT K 45 K 45 0 3 26 0 0 3 3 3 7 8 13 14 15 16 17 19 21 24 24 24 24 33 35 LCS_AVERAGE LCS_A: 41.72 ( 17.41 31.15 76.60 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 12 15 18 20 22 23 24 25 27 29 32 35 36 37 38 38 39 40 41 GDT PERCENT_AT 25.00 27.27 34.09 40.91 45.45 50.00 52.27 54.55 56.82 61.36 65.91 72.73 79.55 81.82 84.09 86.36 86.36 88.64 90.91 93.18 GDT RMS_LOCAL 0.28 0.60 0.85 1.22 1.42 1.64 1.93 1.96 2.19 2.55 2.98 4.21 4.41 4.61 4.74 4.84 4.84 5.01 5.35 5.46 GDT RMS_ALL_AT 7.47 7.58 7.76 7.82 7.81 7.79 7.84 7.85 7.73 7.74 7.41 6.70 6.73 6.71 6.78 6.74 6.74 6.77 6.96 6.86 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 6.202 0 0.608 0.615 8.069 2.727 2.182 - LGA V 3 V 3 1.866 0 0.551 0.517 3.076 47.273 44.156 2.791 LGA Q 4 Q 4 0.441 0 0.545 1.307 6.831 63.636 35.960 5.982 LGA G 5 G 5 5.300 0 0.196 0.196 8.188 2.727 2.727 - LGA P 6 P 6 7.598 0 0.250 0.397 8.543 0.000 0.000 7.624 LGA W 7 W 7 7.674 0 0.192 1.112 18.202 0.000 0.000 18.202 LGA V 8 V 8 3.753 0 0.661 1.366 5.052 19.091 14.805 4.094 LGA G 9 G 9 5.552 0 0.494 0.494 7.346 0.455 0.455 - LGA S 10 S 10 11.592 0 0.146 0.159 13.624 0.000 0.000 12.603 LGA S 11 S 11 11.118 0 0.044 0.608 12.199 0.000 0.000 10.346 LGA Y 12 Y 12 7.796 0 0.058 1.186 9.773 0.000 16.970 3.356 LGA V 13 V 13 11.032 0 0.066 1.372 14.372 0.000 0.000 13.139 LGA A 14 A 14 16.508 0 0.070 0.067 18.526 0.000 0.000 - LGA E 15 E 15 15.928 0 0.095 1.487 17.502 0.000 0.000 17.502 LGA T 16 T 16 13.293 0 0.026 1.131 13.846 0.000 0.000 10.022 LGA G 17 G 17 14.230 0 0.620 0.620 14.230 0.000 0.000 - LGA Q 18 Q 18 11.621 0 0.650 1.271 18.518 0.000 0.000 16.199 LGA N 19 N 19 8.026 0 0.050 0.189 13.196 0.000 0.000 12.166 LGA W 20 W 20 1.151 0 0.638 0.865 10.451 53.636 18.312 10.451 LGA A 21 A 21 1.382 0 0.036 0.040 1.434 65.455 65.455 - LGA S 22 S 22 0.396 0 0.036 0.672 2.512 95.455 84.848 2.512 LGA L 23 L 23 0.775 0 0.100 0.118 2.242 86.364 67.273 2.242 LGA A 24 A 24 1.204 0 0.042 0.053 1.324 69.545 68.727 - LGA A 25 A 25 0.962 0 0.024 0.029 1.040 81.818 78.545 - LGA N 26 N 26 0.500 0 0.037 0.633 2.710 90.909 79.773 2.710 LGA E 27 E 27 0.913 0 0.074 1.096 4.812 70.000 52.727 4.812 LGA L 28 L 28 0.687 0 0.025 0.379 1.773 81.818 80.227 0.276 LGA R 29 R 29 0.632 0 0.025 1.840 10.105 82.273 39.504 10.105 LGA V 30 V 30 1.311 0 0.196 1.048 3.267 73.636 59.221 3.267 LGA T 31 T 31 1.220 0 0.631 0.491 3.142 51.818 41.558 2.798 LGA E 32 E 32 5.369 0 0.499 1.461 13.305 3.182 1.414 13.305 LGA R 33 R 33 1.784 0 0.650 1.301 7.442 30.455 20.661 5.116 LGA P 34 P 34 2.259 0 0.078 0.071 5.251 31.364 19.481 5.251 LGA F 35 F 35 2.104 0 0.482 1.216 6.238 36.364 16.198 5.781 LGA W 36 W 36 4.069 0 0.635 0.398 12.883 22.273 6.364 12.883 LGA I 37 I 37 2.714 0 0.066 1.712 6.312 46.364 32.727 2.057 LGA S 38 S 38 2.010 0 0.216 0.693 4.482 41.818 31.818 4.482 LGA S 39 S 39 2.536 0 0.224 0.723 4.691 28.182 25.152 3.710 LGA F 40 F 40 2.224 0 0.073 0.240 6.434 35.455 19.835 6.434 LGA I 41 I 41 3.350 0 0.457 1.291 6.848 14.545 9.318 5.319 LGA G 42 G 42 6.546 0 0.032 0.032 10.898 0.455 0.455 - LGA R 43 R 43 12.699 0 0.685 1.227 18.109 0.000 0.000 18.109 LGA S 44 S 44 16.388 0 0.691 0.780 18.022 0.000 0.000 14.750 LGA K 45 K 45 18.832 0 0.078 1.005 25.635 0.000 0.000 24.852 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.634 6.663 8.145 30.207 23.565 9.870 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 1.96 52.273 48.118 1.163 LGA_LOCAL RMSD: 1.964 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 7.845 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.634 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.137643 * X + -0.700220 * Y + 0.700533 * Z + 7.907272 Y_new = 0.110831 * X + -0.691935 * Y + -0.713402 * Z + 112.782990 Z_new = 0.984262 * X + 0.175836 * Y + -0.017634 * Z + -53.197376 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.677908 -1.393145 1.670748 [DEG: 38.8413 -79.8213 95.7268 ] ZXZ: 0.776297 1.588431 1.394014 [DEG: 44.4786 91.0104 79.8711 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS145_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 1.96 48.118 6.63 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS145_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 17 N ALA 2 8.363 42.148 11.009 1.00 4.18 ATOM 19 CA ALA 2 9.561 41.589 10.393 1.00 4.18 ATOM 21 CB ALA 2 10.678 42.454 10.909 1.00 4.18 ATOM 25 C ALA 2 9.869 40.160 10.792 1.00 4.18 ATOM 26 O ALA 2 11.006 39.705 10.697 1.00 4.18 ATOM 27 N VAL 3 8.819 39.464 11.219 1.00 3.33 ATOM 29 CA VAL 3 8.745 38.004 11.250 1.00 3.33 ATOM 31 CB VAL 3 7.285 37.540 11.242 1.00 3.33 ATOM 33 CG1 VAL 3 7.127 36.042 11.503 1.00 3.33 ATOM 37 CG2 VAL 3 6.474 38.362 12.228 1.00 3.33 ATOM 41 C VAL 3 9.457 37.495 10.020 1.00 3.33 ATOM 42 O VAL 3 10.403 36.744 10.172 1.00 3.33 ATOM 43 N GLN 4 9.105 38.059 8.854 1.00 4.00 ATOM 45 CA GLN 4 9.800 37.852 7.583 1.00 4.00 ATOM 47 CB GLN 4 11.107 38.671 7.510 1.00 4.00 ATOM 50 CG GLN 4 11.679 38.885 6.098 1.00 4.00 ATOM 53 CD GLN 4 10.642 39.344 5.074 1.00 4.00 ATOM 54 OE1 GLN 4 9.824 38.570 4.600 1.00 4.00 ATOM 55 NE2 GLN 4 10.592 40.597 4.702 1.00 4.00 ATOM 58 C GLN 4 9.862 36.370 7.174 1.00 4.00 ATOM 59 O GLN 4 10.840 35.933 6.558 1.00 4.00 ATOM 60 N GLY 5 8.810 35.588 7.479 1.00 3.45 ATOM 62 CA GLY 5 8.772 34.268 6.880 1.00 3.45 ATOM 65 C GLY 5 7.710 33.196 7.125 1.00 3.45 ATOM 66 O GLY 5 7.321 33.046 8.272 1.00 3.45 ATOM 67 N PRO 6 7.442 32.363 6.063 1.00 3.65 ATOM 68 CD PRO 6 8.521 31.753 5.290 1.00 3.65 ATOM 71 CG PRO 6 8.053 31.672 3.836 1.00 3.65 ATOM 74 CB PRO 6 6.552 31.449 3.972 1.00 3.65 ATOM 77 CA PRO 6 6.196 32.242 5.232 1.00 3.65 ATOM 79 C PRO 6 4.945 31.778 5.981 1.00 3.65 ATOM 80 O PRO 6 4.101 31.066 5.428 1.00 3.65 ATOM 81 N TRP 7 4.797 32.202 7.235 1.00 3.08 ATOM 83 CA TRP 7 3.551 32.126 8.006 1.00 3.08 ATOM 85 CB TRP 7 3.664 31.089 9.120 1.00 3.08 ATOM 88 CG TRP 7 4.571 31.395 10.271 1.00 3.08 ATOM 89 CD1 TRP 7 5.922 31.340 10.294 1.00 3.08 ATOM 91 NE1 TRP 7 6.385 31.545 11.578 1.00 3.08 ATOM 93 CE2 TRP 7 5.341 31.704 12.459 1.00 3.08 ATOM 94 CZ2 TRP 7 5.271 31.775 13.855 1.00 3.08 ATOM 96 CH2 TRP 7 4.008 31.844 14.468 1.00 3.08 ATOM 98 CZ3 TRP 7 2.844 31.869 13.680 1.00 3.08 ATOM 100 CE3 TRP 7 2.926 31.789 12.282 1.00 3.08 ATOM 102 CD2 TRP 7 4.173 31.672 11.641 1.00 3.08 ATOM 103 C TRP 7 3.025 33.499 8.461 1.00 3.08 ATOM 104 O TRP 7 2.304 33.674 9.441 1.00 3.08 ATOM 105 N VAL 8 3.397 34.496 7.666 1.00 2.33 ATOM 107 CA VAL 8 3.060 35.913 7.774 1.00 2.33 ATOM 109 CB VAL 8 4.158 36.703 8.488 1.00 2.33 ATOM 111 CG1 VAL 8 3.965 36.519 9.986 1.00 2.33 ATOM 115 CG2 VAL 8 5.581 36.298 8.072 1.00 2.33 ATOM 119 C VAL 8 2.841 36.457 6.370 1.00 2.33 ATOM 120 O VAL 8 3.379 35.926 5.403 1.00 2.33 ATOM 121 N GLY 9 2.081 37.536 6.234 1.00 2.48 ATOM 123 CA GLY 9 1.902 38.208 4.953 1.00 2.48 ATOM 126 C GLY 9 0.473 38.208 4.386 1.00 2.48 ATOM 127 O GLY 9 -0.352 37.322 4.616 1.00 2.48 ATOM 128 N SER 10 0.222 39.208 3.542 1.00 2.50 ATOM 130 CA SER 10 -0.999 39.340 2.737 1.00 2.50 ATOM 132 CB SER 10 -0.879 40.601 1.860 1.00 2.50 ATOM 135 OG SER 10 0.406 40.713 1.237 1.00 2.50 ATOM 137 C SER 10 -1.251 38.110 1.845 1.00 2.50 ATOM 138 O SER 10 -2.302 37.457 1.867 1.00 2.50 ATOM 139 N SER 11 -0.211 37.743 1.099 1.00 2.61 ATOM 141 CA SER 11 -0.196 36.498 0.348 1.00 2.61 ATOM 143 CB SER 11 1.063 36.402 -0.519 1.00 2.61 ATOM 146 OG SER 11 2.222 36.170 0.266 1.00 2.61 ATOM 148 C SER 11 -0.389 35.292 1.260 1.00 2.61 ATOM 149 O SER 11 -1.227 34.498 0.910 1.00 2.61 ATOM 150 N TYR 12 0.177 35.202 2.473 1.00 2.03 ATOM 152 CA TYR 12 -0.183 34.112 3.405 1.00 2.03 ATOM 154 CB TYR 12 0.676 34.155 4.676 1.00 2.03 ATOM 157 CG TYR 12 0.515 32.952 5.589 1.00 2.03 ATOM 158 CD1 TYR 12 0.824 31.664 5.109 1.00 2.03 ATOM 160 CE1 TYR 12 0.687 30.546 5.950 1.00 2.03 ATOM 162 CZ TYR 12 0.247 30.702 7.279 1.00 2.03 ATOM 163 OH TYR 12 0.155 29.610 8.083 1.00 2.03 ATOM 165 CE2 TYR 12 -0.061 31.993 7.765 1.00 2.03 ATOM 167 CD2 TYR 12 0.072 33.113 6.918 1.00 2.03 ATOM 169 C TYR 12 -1.690 34.018 3.710 1.00 2.03 ATOM 170 O TYR 12 -2.227 32.908 3.744 1.00 2.03 ATOM 171 N VAL 13 -2.420 35.144 3.814 1.00 1.68 ATOM 173 CA VAL 13 -3.907 35.058 3.854 1.00 1.68 ATOM 175 CB VAL 13 -4.631 36.371 4.256 1.00 1.68 ATOM 177 CG1 VAL 13 -3.738 37.369 5.004 1.00 1.68 ATOM 181 CG2 VAL 13 -5.369 37.140 3.147 1.00 1.68 ATOM 185 C VAL 13 -4.512 34.451 2.590 1.00 1.68 ATOM 186 O VAL 13 -5.477 33.700 2.709 1.00 1.68 ATOM 187 N ALA 14 -3.966 34.734 1.401 1.00 2.20 ATOM 189 CA ALA 14 -4.431 34.059 0.169 1.00 2.20 ATOM 191 CB ALA 14 -3.961 34.881 -1.038 1.00 2.20 ATOM 195 C ALA 14 -4.007 32.569 0.018 1.00 2.20 ATOM 196 O ALA 14 -4.758 31.771 -0.536 1.00 2.20 ATOM 197 N GLU 15 -2.818 32.197 0.490 1.00 2.25 ATOM 199 CA GLU 15 -2.128 30.911 0.307 1.00 2.25 ATOM 201 CB GLU 15 -0.599 31.144 0.449 1.00 2.25 ATOM 204 CG GLU 15 0.075 31.993 -0.652 1.00 2.25 ATOM 207 CD GLU 15 1.516 32.414 -0.275 1.00 2.25 ATOM 208 OE1 GLU 15 2.411 31.545 -0.308 1.00 2.25 ATOM 209 OE2 GLU 15 1.755 33.617 0.020 1.00 2.25 ATOM 210 C GLU 15 -2.547 29.876 1.362 1.00 2.25 ATOM 211 O GLU 15 -2.368 28.674 1.171 1.00 2.25 ATOM 212 N THR 16 -3.068 30.320 2.513 1.00 2.13 ATOM 214 CA THR 16 -3.442 29.435 3.634 1.00 2.13 ATOM 216 CB THR 16 -2.242 29.249 4.580 1.00 2.13 ATOM 218 CG2 THR 16 -2.465 28.238 5.696 1.00 2.13 ATOM 222 OG1 THR 16 -1.164 28.701 3.849 1.00 2.13 ATOM 224 C THR 16 -4.768 29.809 4.319 1.00 2.13 ATOM 225 O THR 16 -5.354 28.999 5.041 1.00 2.13 ATOM 226 N GLY 17 -5.337 30.972 3.998 1.00 1.95 ATOM 228 CA GLY 17 -6.698 31.358 4.367 1.00 1.95 ATOM 231 C GLY 17 -6.686 32.501 5.386 1.00 1.95 ATOM 232 O GLY 17 -5.872 32.554 6.315 1.00 1.95 ATOM 233 N GLN 18 -7.653 33.409 5.267 1.00 2.28 ATOM 235 CA GLN 18 -7.828 34.507 6.223 1.00 2.28 ATOM 237 CB GLN 18 -8.997 35.395 5.778 1.00 2.28 ATOM 240 CG GLN 18 -8.660 36.195 4.512 1.00 2.28 ATOM 243 CD GLN 18 -9.909 36.816 3.904 1.00 2.28 ATOM 244 OE1 GLN 18 -10.799 36.131 3.438 1.00 2.28 ATOM 245 NE2 GLN 18 -10.031 38.124 3.874 1.00 2.28 ATOM 248 C GLN 18 -8.060 34.005 7.661 1.00 2.28 ATOM 249 O GLN 18 -7.639 34.649 8.619 1.00 2.28 ATOM 250 N ASN 19 -8.651 32.818 7.842 1.00 2.32 ATOM 252 CA ASN 19 -8.732 32.179 9.158 1.00 2.32 ATOM 254 CB ASN 19 -9.693 30.983 9.106 1.00 2.32 ATOM 257 CG ASN 19 -11.106 31.471 8.860 1.00 2.32 ATOM 258 OD1 ASN 19 -11.551 31.569 7.731 1.00 2.32 ATOM 259 ND2 ASN 19 -11.813 31.860 9.899 1.00 2.32 ATOM 262 C ASN 19 -7.343 31.824 9.740 1.00 2.32 ATOM 263 O ASN 19 -7.106 32.039 10.933 1.00 2.32 ATOM 264 N TRP 20 -6.393 31.384 8.904 1.00 1.90 ATOM 266 CA TRP 20 -4.994 31.259 9.319 1.00 1.90 ATOM 268 CB TRP 20 -4.172 30.371 8.374 1.00 1.90 ATOM 271 CG TRP 20 -3.599 29.140 9.029 1.00 1.90 ATOM 272 CD1 TRP 20 -3.994 27.870 8.774 1.00 1.90 ATOM 274 NE1 TRP 20 -3.235 26.984 9.513 1.00 1.90 ATOM 276 CE2 TRP 20 -2.323 27.638 10.313 1.00 1.90 ATOM 277 CZ2 TRP 20 -1.366 27.182 11.233 1.00 1.90 ATOM 279 CH2 TRP 20 -0.593 28.123 11.935 1.00 1.90 ATOM 281 CZ3 TRP 20 -0.772 29.493 11.687 1.00 1.90 ATOM 283 CE3 TRP 20 -1.716 29.936 10.741 1.00 1.90 ATOM 285 CD2 TRP 20 -2.532 29.024 10.033 1.00 1.90 ATOM 286 C TRP 20 -4.330 32.620 9.566 1.00 1.90 ATOM 287 O TRP 20 -3.495 32.717 10.453 1.00 1.90 ATOM 288 N ALA 21 -4.742 33.702 8.900 1.00 1.45 ATOM 290 CA ALA 21 -4.322 35.055 9.301 1.00 1.45 ATOM 292 CB ALA 21 -4.734 36.048 8.210 1.00 1.45 ATOM 296 C ALA 21 -4.850 35.479 10.699 1.00 1.45 ATOM 297 O ALA 21 -4.182 36.239 11.400 1.00 1.45 ATOM 298 N SER 22 -6.002 34.959 11.144 1.00 1.62 ATOM 300 CA SER 22 -6.512 35.117 12.526 1.00 1.62 ATOM 302 CB SER 22 -7.977 34.645 12.586 1.00 1.62 ATOM 305 OG SER 22 -8.771 35.456 13.428 1.00 1.62 ATOM 307 C SER 22 -5.684 34.323 13.561 1.00 1.62 ATOM 308 O SER 22 -5.312 34.835 14.627 1.00 1.62 ATOM 309 N LEU 23 -5.330 33.071 13.227 1.00 1.78 ATOM 311 CA LEU 23 -4.420 32.254 14.053 1.00 1.78 ATOM 313 CB LEU 23 -4.268 30.841 13.456 1.00 1.78 ATOM 316 CG LEU 23 -5.539 29.975 13.488 1.00 1.78 ATOM 318 CD1 LEU 23 -5.259 28.615 12.848 1.00 1.78 ATOM 322 CD2 LEU 23 -6.043 29.732 14.913 1.00 1.78 ATOM 326 C LEU 23 -3.041 32.914 14.224 1.00 1.78 ATOM 327 O LEU 23 -2.575 33.120 15.343 1.00 1.78 ATOM 328 N ALA 24 -2.469 33.371 13.112 1.00 1.56 ATOM 330 CA ALA 24 -1.235 34.131 13.070 1.00 1.56 ATOM 332 CB ALA 24 -0.799 34.253 11.608 1.00 1.56 ATOM 336 C ALA 24 -1.349 35.482 13.803 1.00 1.56 ATOM 337 O ALA 24 -0.369 35.934 14.375 1.00 1.56 ATOM 338 N ALA 25 -2.522 36.119 13.892 1.00 1.36 ATOM 340 CA ALA 25 -2.727 37.263 14.790 1.00 1.36 ATOM 342 CB ALA 25 -4.044 37.971 14.441 1.00 1.36 ATOM 346 C ALA 25 -2.654 36.877 16.275 1.00 1.36 ATOM 347 O ALA 25 -2.026 37.600 17.049 1.00 1.36 ATOM 348 N ASN 26 -3.202 35.728 16.690 1.00 1.54 ATOM 350 CA ASN 26 -2.968 35.224 18.055 1.00 1.54 ATOM 352 CB ASN 26 -3.855 33.990 18.296 1.00 1.54 ATOM 355 CG ASN 26 -5.256 34.397 18.691 1.00 1.54 ATOM 356 OD1 ASN 26 -5.495 34.699 19.858 1.00 1.54 ATOM 357 ND2 ASN 26 -6.163 34.464 17.744 1.00 1.54 ATOM 360 C ASN 26 -1.480 34.936 18.346 1.00 1.54 ATOM 361 O ASN 26 -0.975 35.341 19.394 1.00 1.54 ATOM 362 N GLU 27 -0.780 34.304 17.406 1.00 2.14 ATOM 364 CA GLU 27 0.626 33.878 17.519 1.00 2.14 ATOM 366 CB GLU 27 0.814 32.706 16.547 1.00 2.14 ATOM 369 CG GLU 27 0.045 31.460 17.036 1.00 2.14 ATOM 372 CD GLU 27 0.196 30.240 16.116 1.00 2.14 ATOM 373 OE1 GLU 27 0.013 30.408 14.890 1.00 2.14 ATOM 374 OE2 GLU 27 0.460 29.135 16.657 1.00 2.14 ATOM 375 C GLU 27 1.649 35.006 17.298 1.00 2.14 ATOM 376 O GLU 27 2.828 34.863 17.601 1.00 2.14 ATOM 377 N LEU 28 1.184 36.174 16.855 1.00 2.31 ATOM 379 CA LEU 28 1.908 37.449 16.841 1.00 2.31 ATOM 381 CB LEU 28 2.020 37.935 15.393 1.00 2.31 ATOM 384 CG LEU 28 3.025 37.028 14.647 1.00 2.31 ATOM 386 CD1 LEU 28 2.710 36.746 13.183 1.00 2.31 ATOM 390 CD2 LEU 28 4.392 37.685 14.692 1.00 2.31 ATOM 394 C LEU 28 1.334 38.441 17.872 1.00 2.31 ATOM 395 O LEU 28 1.716 39.605 17.925 1.00 2.31 ATOM 396 N ARG 29 0.453 37.923 18.737 1.00 2.20 ATOM 398 CA ARG 29 -0.251 38.570 19.847 1.00 2.20 ATOM 400 CB ARG 29 0.503 38.342 21.171 1.00 2.20 ATOM 403 CG ARG 29 -0.338 38.556 22.450 1.00 2.20 ATOM 406 CD ARG 29 -1.806 38.084 22.403 1.00 2.20 ATOM 409 NE ARG 29 -1.955 36.639 22.109 1.00 2.20 ATOM 411 CZ ARG 29 -3.052 36.017 21.702 1.00 2.20 ATOM 412 NH1 ARG 29 -3.097 34.726 21.564 1.00 2.20 ATOM 415 NH2 ARG 29 -4.148 36.643 21.392 1.00 2.20 ATOM 418 C ARG 29 -0.768 39.983 19.566 1.00 2.20 ATOM 419 O ARG 29 -0.776 40.851 20.435 1.00 2.20 ATOM 420 N VAL 30 -1.354 40.141 18.383 1.00 2.23 ATOM 422 CA VAL 30 -2.086 41.328 17.935 1.00 2.23 ATOM 424 CB VAL 30 -1.469 41.966 16.692 1.00 2.23 ATOM 426 CG1 VAL 30 -0.178 42.698 17.061 1.00 2.23 ATOM 430 CG2 VAL 30 -1.229 40.931 15.592 1.00 2.23 ATOM 434 C VAL 30 -3.583 41.056 17.760 1.00 2.23 ATOM 435 O VAL 30 -4.049 39.919 17.717 1.00 2.23 ATOM 436 N THR 31 -4.374 42.127 17.750 1.00 3.10 ATOM 438 CA THR 31 -5.839 42.056 17.758 1.00 3.10 ATOM 440 CB THR 31 -6.447 43.444 18.024 1.00 3.10 ATOM 442 CG2 THR 31 -6.338 43.817 19.502 1.00 3.10 ATOM 446 OG1 THR 31 -5.768 44.457 17.312 1.00 3.10 ATOM 448 C THR 31 -6.387 41.464 16.462 1.00 3.10 ATOM 449 O THR 31 -6.125 41.977 15.380 1.00 3.10 ATOM 450 N GLU 32 -7.176 40.388 16.554 1.00 3.89 ATOM 452 CA GLU 32 -7.500 39.532 15.398 1.00 3.89 ATOM 454 CB GLU 32 -7.596 38.049 15.811 1.00 3.89 ATOM 457 CG GLU 32 -8.744 37.694 16.773 1.00 3.89 ATOM 460 CD GLU 32 -9.334 36.297 16.498 1.00 3.89 ATOM 461 OE1 GLU 32 -8.575 35.376 16.119 1.00 3.89 ATOM 462 OE2 GLU 32 -10.575 36.164 16.627 1.00 3.89 ATOM 463 C GLU 32 -8.654 39.997 14.475 1.00 3.89 ATOM 464 O GLU 32 -9.463 39.193 14.016 1.00 3.89 ATOM 465 N ARG 33 -8.764 41.300 14.186 1.00 3.18 ATOM 467 CA ARG 33 -9.674 41.798 13.130 1.00 3.18 ATOM 469 CB ARG 33 -10.960 42.445 13.690 1.00 3.18 ATOM 472 CG ARG 33 -12.030 41.413 14.134 1.00 3.18 ATOM 475 CD ARG 33 -11.829 40.870 15.560 1.00 3.18 ATOM 478 NE ARG 33 -12.763 39.781 15.939 1.00 3.18 ATOM 480 CZ ARG 33 -12.513 38.483 15.830 1.00 3.18 ATOM 481 NH1 ARG 33 -13.031 37.615 16.649 1.00 3.18 ATOM 484 NH2 ARG 33 -11.693 37.984 14.967 1.00 3.18 ATOM 487 C ARG 33 -8.936 42.589 12.028 1.00 3.18 ATOM 488 O ARG 33 -9.291 42.407 10.867 1.00 3.18 ATOM 489 N PRO 34 -7.856 43.344 12.313 1.00 3.22 ATOM 490 CD PRO 34 -7.748 44.204 13.482 1.00 3.22 ATOM 493 CG PRO 34 -7.104 45.489 12.971 1.00 3.22 ATOM 496 CB PRO 34 -6.162 44.984 11.880 1.00 3.22 ATOM 499 CA PRO 34 -6.872 43.753 11.300 1.00 3.22 ATOM 501 C PRO 34 -5.833 42.693 10.878 1.00 3.22 ATOM 502 O PRO 34 -5.454 41.816 11.650 1.00 3.22 ATOM 503 N PHE 35 -5.286 42.840 9.663 1.00 2.23 ATOM 505 CA PHE 35 -4.293 41.939 9.041 1.00 2.23 ATOM 507 CB PHE 35 -4.664 41.723 7.561 1.00 2.23 ATOM 510 CG PHE 35 -6.021 41.096 7.252 1.00 2.23 ATOM 511 CD1 PHE 35 -6.573 41.286 5.969 1.00 2.23 ATOM 513 CE1 PHE 35 -7.827 40.743 5.639 1.00 2.23 ATOM 515 CZ PHE 35 -8.539 39.994 6.591 1.00 2.23 ATOM 517 CE2 PHE 35 -7.988 39.778 7.864 1.00 2.23 ATOM 519 CD2 PHE 35 -6.733 40.321 8.195 1.00 2.23 ATOM 521 C PHE 35 -2.828 42.431 9.227 1.00 2.23 ATOM 522 O PHE 35 -2.006 42.561 8.295 1.00 2.23 ATOM 523 N TRP 36 -2.492 42.652 10.501 1.00 2.21 ATOM 525 CA TRP 36 -1.139 42.932 11.001 1.00 2.21 ATOM 527 CB TRP 36 -1.139 42.704 12.507 1.00 2.21 ATOM 530 CG TRP 36 -2.153 43.445 13.324 1.00 2.21 ATOM 531 CD1 TRP 36 -3.346 42.961 13.746 1.00 2.21 ATOM 533 NE1 TRP 36 -3.970 43.893 14.550 1.00 2.21 ATOM 535 CE2 TRP 36 -3.217 45.042 14.672 1.00 2.21 ATOM 536 CZ2 TRP 36 -3.411 46.247 15.359 1.00 2.21 ATOM 538 CH2 TRP 36 -2.407 47.231 15.309 1.00 2.21 ATOM 540 CZ3 TRP 36 -1.227 46.995 14.579 1.00 2.21 ATOM 542 CE3 TRP 36 -1.043 45.780 13.889 1.00 2.21 ATOM 544 CD2 TRP 36 -2.038 44.778 13.910 1.00 2.21 ATOM 545 C TRP 36 -0.063 42.025 10.364 1.00 2.21 ATOM 546 O TRP 36 1.051 42.458 10.087 1.00 2.21 ATOM 547 N ILE 37 -0.413 40.769 10.064 1.00 1.89 ATOM 549 CA ILE 37 0.469 39.795 9.408 1.00 1.89 ATOM 551 CB ILE 37 -0.209 38.405 9.327 1.00 1.89 ATOM 553 CG2 ILE 37 -0.135 37.746 10.712 1.00 1.89 ATOM 557 CG1 ILE 37 -1.695 38.353 8.909 1.00 1.89 ATOM 560 CD1 ILE 37 -2.027 38.983 7.560 1.00 1.89 ATOM 564 C ILE 37 1.083 40.260 8.072 1.00 1.89 ATOM 565 O ILE 37 2.233 39.920 7.765 1.00 1.89 ATOM 566 N SER 38 0.365 41.071 7.291 1.00 2.04 ATOM 568 CA SER 38 0.901 41.692 6.074 1.00 2.04 ATOM 570 CB SER 38 -0.157 42.563 5.394 1.00 2.04 ATOM 573 OG SER 38 -1.242 41.742 5.023 1.00 2.04 ATOM 575 C SER 38 2.110 42.518 6.436 1.00 2.04 ATOM 576 O SER 38 3.203 42.237 5.937 1.00 2.04 ATOM 577 N SER 39 1.924 43.429 7.391 1.00 2.44 ATOM 579 CA SER 39 3.038 44.239 7.890 1.00 2.44 ATOM 581 CB SER 39 2.550 45.199 8.975 1.00 2.44 ATOM 584 OG SER 39 1.249 45.687 8.693 1.00 2.44 ATOM 586 C SER 39 4.201 43.363 8.377 1.00 2.44 ATOM 587 O SER 39 5.328 43.541 7.932 1.00 2.44 ATOM 588 N PHE 40 3.898 42.334 9.176 1.00 2.21 ATOM 590 CA PHE 40 4.829 41.335 9.724 1.00 2.21 ATOM 592 CB PHE 40 4.003 40.404 10.607 1.00 2.21 ATOM 595 CG PHE 40 3.292 41.011 11.812 1.00 2.21 ATOM 596 CD1 PHE 40 2.269 40.282 12.437 1.00 2.21 ATOM 598 CE1 PHE 40 1.648 40.767 13.593 1.00 2.21 ATOM 600 CZ PHE 40 2.038 41.998 14.136 1.00 2.21 ATOM 602 CE2 PHE 40 3.028 42.759 13.505 1.00 2.21 ATOM 604 CD2 PHE 40 3.648 42.267 12.347 1.00 2.21 ATOM 606 C PHE 40 5.676 40.538 8.710 1.00 2.21 ATOM 607 O PHE 40 6.716 39.995 9.123 1.00 2.21 ATOM 608 N ILE 41 5.320 40.467 7.414 1.00 1.88 ATOM 610 CA ILE 41 6.300 39.911 6.432 1.00 1.88 ATOM 612 CB ILE 41 5.643 38.916 5.432 1.00 1.88 ATOM 614 CG2 ILE 41 4.827 39.622 4.342 1.00 1.88 ATOM 618 CG1 ILE 41 6.698 37.970 4.795 1.00 1.88 ATOM 621 CD1 ILE 41 6.176 36.745 4.034 1.00 1.88 ATOM 625 C ILE 41 7.215 40.984 5.788 1.00 1.88 ATOM 626 O ILE 41 7.601 40.872 4.626 1.00 1.88 ATOM 627 N GLY 42 7.554 42.076 6.477 1.00 2.94 ATOM 629 CA GLY 42 8.560 43.025 5.971 1.00 2.94 ATOM 632 C GLY 42 8.081 43.917 4.817 1.00 2.94 ATOM 633 O GLY 42 8.823 44.769 4.345 1.00 2.94 ATOM 634 N ARG 43 6.837 43.767 4.345 1.00 4.11 ATOM 636 CA ARG 43 6.309 44.468 3.154 1.00 4.11 ATOM 638 CB ARG 43 5.113 43.676 2.578 1.00 4.11 ATOM 641 CG ARG 43 5.585 42.404 1.846 1.00 4.11 ATOM 644 CD ARG 43 4.437 41.460 1.435 1.00 4.11 ATOM 647 NE ARG 43 4.973 40.185 0.899 1.00 4.11 ATOM 649 CZ ARG 43 4.348 39.030 0.708 1.00 4.11 ATOM 650 NH1 ARG 43 5.012 37.990 0.293 1.00 4.11 ATOM 653 NH2 ARG 43 3.076 38.856 0.918 1.00 4.11 ATOM 656 C ARG 43 5.961 45.948 3.385 1.00 4.11 ATOM 657 O ARG 43 5.818 46.681 2.415 1.00 4.11 ATOM 658 N SER 44 5.867 46.392 4.639 1.00 6.54 ATOM 660 CA SER 44 5.859 47.812 5.056 1.00 6.54 ATOM 662 CB SER 44 4.833 47.968 6.187 1.00 6.54 ATOM 665 OG SER 44 5.106 47.057 7.244 1.00 6.54 ATOM 667 C SER 44 7.225 48.272 5.595 1.00 6.54 ATOM 668 O SER 44 7.431 49.471 5.753 1.00 6.54 ATOM 669 N LYS 45 8.129 47.312 5.859 1.00 5.84 ATOM 671 CA LYS 45 9.587 47.395 6.067 1.00 5.84 ATOM 673 CB LYS 45 10.228 48.499 5.178 1.00 5.84 ATOM 676 CG LYS 45 11.545 48.098 4.482 1.00 5.84 ATOM 679 CD LYS 45 11.310 47.168 3.274 1.00 5.84 ATOM 682 CE LYS 45 12.612 46.562 2.728 1.00 5.84 ATOM 685 NZ LYS 45 12.932 45.271 3.375 1.00 5.84 ATOM 689 C LYS 45 10.047 47.486 7.525 1.00 5.84 ATOM 690 O LYS 45 9.292 47.796 8.442 1.00 5.84 TER END