####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS145_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 43 2 - 44 4.46 5.25 LCS_AVERAGE: 96.33 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 29 9 - 37 1.99 7.36 LCS_AVERAGE: 50.15 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 17 15 - 31 0.92 7.17 LCS_AVERAGE: 23.50 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 43 3 3 4 5 9 14 17 24 29 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT V 3 V 3 3 8 43 3 4 6 7 9 14 16 18 23 31 37 39 41 41 42 42 42 42 42 43 LCS_GDT Q 4 Q 4 3 8 43 3 4 6 7 9 14 17 21 29 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT G 5 G 5 3 8 43 2 3 6 7 12 18 26 29 31 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT P 6 P 6 3 8 43 2 4 6 7 8 14 19 22 29 34 36 38 41 41 42 42 42 42 42 43 LCS_GDT W 7 W 7 3 8 43 3 4 6 7 10 14 19 24 31 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT V 8 V 8 3 26 43 3 3 4 5 11 15 24 29 31 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT G 9 G 9 11 29 43 8 10 11 23 24 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT S 10 S 10 11 29 43 8 10 18 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT S 11 S 11 11 29 43 8 11 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT Y 12 Y 12 11 29 43 8 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT V 13 V 13 11 29 43 8 10 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT A 14 A 14 14 29 43 8 10 16 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT E 15 E 15 17 29 43 8 10 19 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT T 16 T 16 17 29 43 8 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT G 17 G 17 17 29 43 5 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT Q 18 Q 18 17 29 43 5 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT N 19 N 19 17 29 43 4 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT W 20 W 20 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT A 21 A 21 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT S 22 S 22 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT L 23 L 23 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT A 24 A 24 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT A 25 A 25 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT N 26 N 26 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT E 27 E 27 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT L 28 L 28 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT R 29 R 29 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT V 30 V 30 17 29 43 10 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT T 31 T 31 17 29 43 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT E 32 E 32 6 29 43 3 4 5 6 10 20 23 28 32 33 37 39 41 41 42 42 42 42 42 43 LCS_GDT R 33 R 33 6 29 43 3 13 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT P 34 P 34 6 29 43 2 3 5 18 23 27 29 31 32 33 37 39 41 41 42 42 42 42 42 43 LCS_GDT F 35 F 35 6 29 43 2 3 6 18 23 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT W 36 W 36 6 29 43 4 4 7 8 14 25 26 29 31 33 34 39 40 41 42 42 42 42 42 43 LCS_GDT I 37 I 37 6 29 43 4 5 7 19 23 27 29 31 32 33 36 39 41 41 42 42 42 42 42 43 LCS_GDT S 38 S 38 6 8 43 4 5 7 17 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT S 39 S 39 6 8 43 4 5 7 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT F 40 F 40 6 8 43 4 5 7 8 10 20 29 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT I 41 I 41 6 8 43 4 5 7 13 26 27 28 31 32 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT G 42 G 42 5 8 43 4 4 7 8 9 14 16 21 29 34 37 39 41 41 42 42 42 42 42 43 LCS_GDT R 43 R 43 5 8 43 4 4 5 8 9 14 16 18 22 27 34 38 41 41 42 42 42 42 42 43 LCS_GDT S 44 S 44 3 6 43 3 3 4 5 5 5 9 10 13 13 13 14 14 21 30 31 32 42 42 43 LCS_GDT K 45 K 45 3 6 16 3 3 4 5 5 5 9 10 13 13 13 14 14 14 15 18 18 22 22 23 LCS_AVERAGE LCS_A: 56.66 ( 23.50 50.15 96.33 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 11 15 20 23 26 27 29 31 32 34 37 39 41 41 42 42 42 42 42 43 GDT PERCENT_AT 25.00 34.09 45.45 52.27 59.09 61.36 65.91 70.45 72.73 77.27 84.09 88.64 93.18 93.18 95.45 95.45 95.45 95.45 95.45 97.73 GDT RMS_LOCAL 0.26 0.59 0.95 1.21 1.60 1.61 1.83 2.07 2.23 3.18 3.43 3.64 3.91 3.86 4.02 4.02 4.02 4.02 4.02 4.46 GDT RMS_ALL_AT 7.24 7.28 6.94 6.75 6.22 7.18 6.84 6.49 6.48 5.41 5.40 5.38 5.30 5.41 5.34 5.34 5.34 5.34 5.34 5.25 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 10.314 0 0.539 0.566 11.189 0.000 0.000 - LGA V 3 V 3 9.991 0 0.030 0.103 10.914 0.000 0.000 10.154 LGA Q 4 Q 4 10.534 0 0.493 1.220 16.906 0.000 0.000 14.607 LGA G 5 G 5 8.886 0 0.074 0.074 10.009 0.000 0.000 - LGA P 6 P 6 10.016 0 0.158 0.161 13.300 0.000 0.000 13.300 LGA W 7 W 7 8.678 0 0.392 0.968 9.954 0.000 0.909 4.283 LGA V 8 V 8 5.968 0 0.645 0.804 8.390 7.273 4.156 6.427 LGA G 9 G 9 2.970 0 0.565 0.565 3.436 30.455 30.455 - LGA S 10 S 10 2.183 0 0.110 0.129 2.938 48.182 41.212 2.796 LGA S 11 S 11 0.591 0 0.151 0.802 2.095 77.727 71.818 2.095 LGA Y 12 Y 12 1.348 0 0.051 1.124 12.711 65.455 25.152 12.711 LGA V 13 V 13 1.652 0 0.186 1.184 5.656 58.182 43.117 5.656 LGA A 14 A 14 1.858 0 0.048 0.059 2.272 51.364 48.727 - LGA E 15 E 15 1.602 0 0.032 1.245 4.325 58.182 35.152 4.210 LGA T 16 T 16 0.854 0 0.022 0.162 1.415 81.818 79.481 0.794 LGA G 17 G 17 0.668 0 0.057 0.057 0.844 81.818 81.818 - LGA Q 18 Q 18 0.591 0 0.216 0.692 1.672 78.636 68.081 1.586 LGA N 19 N 19 0.711 0 0.361 1.155 3.569 77.727 61.136 3.569 LGA W 20 W 20 1.533 0 0.054 1.105 5.610 61.818 35.325 3.147 LGA A 21 A 21 1.160 0 0.075 0.076 1.288 69.545 68.727 - LGA S 22 S 22 0.622 0 0.076 0.686 2.400 81.818 74.545 2.400 LGA L 23 L 23 0.891 0 0.054 0.660 3.216 86.364 64.773 2.397 LGA A 24 A 24 1.011 0 0.093 0.113 1.274 73.636 72.000 - LGA A 25 A 25 0.794 0 0.016 0.026 1.132 77.727 78.545 - LGA N 26 N 26 0.970 0 0.080 0.879 2.898 73.636 66.818 2.898 LGA E 27 E 27 0.927 0 0.092 0.440 1.652 70.000 76.970 1.026 LGA L 28 L 28 1.348 0 0.050 0.136 2.165 62.273 55.000 2.165 LGA R 29 R 29 1.762 0 0.067 1.090 5.004 54.545 25.785 5.004 LGA V 30 V 30 1.785 0 0.069 0.119 3.044 62.273 49.091 2.285 LGA T 31 T 31 1.741 0 0.661 0.939 5.064 44.545 33.247 2.716 LGA E 32 E 32 5.465 0 0.438 1.156 12.946 3.182 1.414 12.946 LGA R 33 R 33 1.568 0 0.628 1.282 11.005 26.818 16.198 11.005 LGA P 34 P 34 3.731 0 0.249 0.448 7.040 13.182 7.792 7.040 LGA F 35 F 35 2.955 0 0.373 1.131 4.211 19.545 22.479 3.469 LGA W 36 W 36 5.479 0 0.638 1.343 17.494 4.545 1.299 17.494 LGA I 37 I 37 3.912 0 0.128 0.790 6.067 28.636 14.545 6.067 LGA S 38 S 38 2.994 0 0.022 0.154 4.904 25.909 17.879 4.545 LGA S 39 S 39 2.422 0 0.063 0.645 4.982 31.818 26.061 4.982 LGA F 40 F 40 3.399 0 0.123 0.951 9.735 14.091 6.777 9.560 LGA I 41 I 41 4.432 0 0.138 1.230 6.957 8.182 4.545 5.682 LGA G 42 G 42 10.663 0 0.073 0.073 13.735 0.000 0.000 - LGA R 43 R 43 11.817 0 0.636 1.628 19.382 0.000 0.000 19.382 LGA S 44 S 44 17.232 0 0.331 0.378 18.494 0.000 0.000 16.990 LGA K 45 K 45 22.392 0 0.413 1.189 24.980 0.000 0.000 22.424 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 5.213 5.267 6.853 38.884 32.069 15.221 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 31 2.07 63.068 62.329 1.431 LGA_LOCAL RMSD: 2.067 Number of atoms: 31 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 6.487 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 5.213 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.959091 * X + -0.009909 * Y + 0.282925 * Z + 31.907688 Y_new = 0.094402 * X + 0.930993 * Y + 0.352620 * Z + -51.017540 Z_new = -0.266895 * X + 0.364904 * Y + -0.891971 * Z + 45.829144 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 3.043480 0.270170 2.753268 [DEG: 174.3786 15.4796 157.7506 ] ZXZ: 2.465420 2.672483 -0.631499 [DEG: 141.2582 153.1220 -36.1822 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS145_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS145_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 31 2.07 62.329 5.21 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS145_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 17 N ALA 2 9.371 39.089 4.718 1.00 3.86 ATOM 19 CA ALA 2 8.814 40.286 4.072 1.00 3.86 ATOM 21 CB ALA 2 9.796 41.443 4.312 1.00 3.86 ATOM 25 C ALA 2 8.418 40.162 2.571 1.00 3.86 ATOM 26 O ALA 2 8.696 41.078 1.784 1.00 3.86 ATOM 27 N VAL 3 7.765 39.068 2.158 1.00 3.49 ATOM 29 CA VAL 3 7.266 38.850 0.786 1.00 3.49 ATOM 31 CB VAL 3 7.209 37.355 0.417 1.00 3.49 ATOM 33 CG1 VAL 3 7.033 37.209 -1.102 1.00 3.49 ATOM 37 CG2 VAL 3 8.499 36.616 0.803 1.00 3.49 ATOM 41 C VAL 3 5.911 39.515 0.546 1.00 3.49 ATOM 42 O VAL 3 5.044 39.517 1.411 1.00 3.49 ATOM 43 N GLN 4 5.761 40.118 -0.634 1.00 3.65 ATOM 45 CA GLN 4 4.769 41.137 -1.016 1.00 3.65 ATOM 47 CB GLN 4 5.412 41.937 -2.184 1.00 3.65 ATOM 50 CG GLN 4 4.803 43.320 -2.526 1.00 3.65 ATOM 53 CD GLN 4 5.367 44.499 -1.733 1.00 3.65 ATOM 54 OE1 GLN 4 6.444 44.431 -1.148 1.00 3.65 ATOM 55 NE2 GLN 4 4.671 45.615 -1.729 1.00 3.65 ATOM 58 C GLN 4 3.386 40.610 -1.396 1.00 3.65 ATOM 59 O GLN 4 2.819 41.011 -2.414 1.00 3.65 ATOM 60 N GLY 5 2.814 39.746 -0.568 1.00 3.77 ATOM 62 CA GLY 5 1.358 39.684 -0.515 1.00 3.77 ATOM 65 C GLY 5 0.909 40.166 0.841 1.00 3.77 ATOM 66 O GLY 5 1.615 39.966 1.822 1.00 3.77 ATOM 67 N PRO 6 -0.315 40.689 0.937 1.00 3.83 ATOM 68 CD PRO 6 -1.046 41.380 -0.084 1.00 3.83 ATOM 71 CG PRO 6 -2.409 41.746 0.507 1.00 3.83 ATOM 74 CB PRO 6 -2.102 41.817 1.993 1.00 3.83 ATOM 77 CA PRO 6 -1.030 40.768 2.175 1.00 3.83 ATOM 79 C PRO 6 -1.399 39.400 2.777 1.00 3.83 ATOM 80 O PRO 6 -2.254 39.331 3.652 1.00 3.83 ATOM 81 N TRP 7 -0.754 38.320 2.310 1.00 3.42 ATOM 83 CA TRP 7 -0.912 36.942 2.729 1.00 3.42 ATOM 85 CB TRP 7 0.223 36.023 2.207 1.00 3.42 ATOM 88 CG TRP 7 0.925 36.099 0.891 1.00 3.42 ATOM 89 CD1 TRP 7 0.411 36.356 -0.326 1.00 3.42 ATOM 91 NE1 TRP 7 1.428 36.344 -1.264 1.00 3.42 ATOM 93 CE2 TRP 7 2.602 35.863 -0.737 1.00 3.42 ATOM 94 CZ2 TRP 7 3.827 35.489 -1.305 1.00 3.42 ATOM 96 CH2 TRP 7 4.796 34.890 -0.482 1.00 3.42 ATOM 98 CZ3 TRP 7 4.558 34.747 0.898 1.00 3.42 ATOM 100 CE3 TRP 7 3.336 35.160 1.458 1.00 3.42 ATOM 102 CD2 TRP 7 2.312 35.700 0.647 1.00 3.42 ATOM 103 C TRP 7 -0.958 36.722 4.258 1.00 3.42 ATOM 104 O TRP 7 -0.496 37.516 5.081 1.00 3.42 ATOM 105 N VAL 8 -1.310 35.487 4.627 1.00 2.88 ATOM 107 CA VAL 8 -0.605 34.871 5.746 1.00 2.88 ATOM 109 CB VAL 8 -1.092 33.432 6.000 1.00 2.88 ATOM 111 CG1 VAL 8 -0.614 32.348 5.025 1.00 2.88 ATOM 115 CG2 VAL 8 -0.595 32.967 7.349 1.00 2.88 ATOM 119 C VAL 8 0.897 34.867 5.469 1.00 2.88 ATOM 120 O VAL 8 1.332 34.391 4.420 1.00 2.88 ATOM 121 N GLY 9 1.701 35.346 6.411 1.00 3.21 ATOM 123 CA GLY 9 3.120 35.051 6.360 1.00 3.21 ATOM 126 C GLY 9 3.336 33.559 6.437 1.00 3.21 ATOM 127 O GLY 9 3.245 33.020 7.525 1.00 3.21 ATOM 128 N SER 10 3.535 32.886 5.303 1.00 3.54 ATOM 130 CA SER 10 3.748 31.439 5.217 1.00 3.54 ATOM 132 CB SER 10 3.954 31.033 3.754 1.00 3.54 ATOM 135 OG SER 10 4.819 31.932 3.076 1.00 3.54 ATOM 137 C SER 10 4.910 30.992 6.109 1.00 3.54 ATOM 138 O SER 10 4.774 30.016 6.850 1.00 3.54 ATOM 139 N SER 11 5.988 31.778 6.125 1.00 3.33 ATOM 141 CA SER 11 7.061 31.733 7.126 1.00 3.33 ATOM 143 CB SER 11 8.063 32.858 6.808 1.00 3.33 ATOM 146 OG SER 11 7.401 34.058 6.422 1.00 3.33 ATOM 148 C SER 11 6.514 31.825 8.556 1.00 3.33 ATOM 149 O SER 11 6.497 30.820 9.264 1.00 3.33 ATOM 150 N TYR 12 5.928 32.965 8.935 1.00 2.24 ATOM 152 CA TYR 12 5.360 33.194 10.273 1.00 2.24 ATOM 154 CB TYR 12 4.700 34.576 10.339 1.00 2.24 ATOM 157 CG TYR 12 5.663 35.748 10.332 1.00 2.24 ATOM 158 CD1 TYR 12 5.854 36.520 9.169 1.00 2.24 ATOM 160 CE1 TYR 12 6.701 37.643 9.201 1.00 2.24 ATOM 162 CZ TYR 12 7.364 37.991 10.391 1.00 2.24 ATOM 163 OH TYR 12 8.149 39.097 10.416 1.00 2.24 ATOM 165 CE2 TYR 12 7.196 37.206 11.551 1.00 2.24 ATOM 167 CD2 TYR 12 6.347 36.083 11.517 1.00 2.24 ATOM 169 C TYR 12 4.376 32.118 10.791 1.00 2.24 ATOM 170 O TYR 12 4.301 31.885 12.000 1.00 2.24 ATOM 171 N VAL 13 3.618 31.440 9.920 1.00 2.10 ATOM 173 CA VAL 13 2.660 30.381 10.286 1.00 2.10 ATOM 175 CB VAL 13 1.328 30.441 9.547 1.00 2.10 ATOM 177 CG1 VAL 13 0.647 31.748 9.913 1.00 2.10 ATOM 181 CG2 VAL 13 1.395 30.180 8.040 1.00 2.10 ATOM 185 C VAL 13 3.223 28.967 10.209 1.00 2.10 ATOM 186 O VAL 13 2.589 28.042 10.725 1.00 2.10 ATOM 187 N ALA 14 4.405 28.788 9.616 1.00 2.21 ATOM 189 CA ALA 14 5.265 27.671 9.983 1.00 2.21 ATOM 191 CB ALA 14 6.333 27.473 8.898 1.00 2.21 ATOM 195 C ALA 14 5.899 27.884 11.375 1.00 2.21 ATOM 196 O ALA 14 5.821 26.999 12.220 1.00 2.21 ATOM 197 N GLU 15 6.454 29.071 11.646 1.00 2.49 ATOM 199 CA GLU 15 7.163 29.434 12.887 1.00 2.49 ATOM 201 CB GLU 15 7.718 30.864 12.738 1.00 2.49 ATOM 204 CG GLU 15 8.851 30.990 11.703 1.00 2.49 ATOM 207 CD GLU 15 9.004 32.429 11.179 1.00 2.49 ATOM 208 OE1 GLU 15 9.048 33.361 12.015 1.00 2.49 ATOM 209 OE2 GLU 15 9.057 32.582 9.937 1.00 2.49 ATOM 210 C GLU 15 6.280 29.354 14.143 1.00 2.49 ATOM 211 O GLU 15 6.721 28.848 15.174 1.00 2.49 ATOM 212 N THR 16 5.024 29.809 14.043 1.00 2.21 ATOM 214 CA THR 16 3.996 29.650 15.092 1.00 2.21 ATOM 216 CB THR 16 2.910 30.735 15.012 1.00 2.21 ATOM 218 CG2 THR 16 3.429 32.119 15.392 1.00 2.21 ATOM 222 OG1 THR 16 2.407 30.830 13.702 1.00 2.21 ATOM 224 C THR 16 3.316 28.276 15.071 1.00 2.21 ATOM 225 O THR 16 2.642 27.928 16.033 1.00 2.21 ATOM 226 N GLY 17 3.448 27.490 13.994 1.00 2.13 ATOM 228 CA GLY 17 2.675 26.258 13.753 1.00 2.13 ATOM 231 C GLY 17 1.239 26.478 13.247 1.00 2.13 ATOM 232 O GLY 17 0.537 25.520 12.923 1.00 2.13 ATOM 233 N GLN 18 0.791 27.729 13.160 1.00 1.77 ATOM 235 CA GLN 18 -0.614 28.096 13.352 1.00 1.77 ATOM 237 CB GLN 18 -0.687 29.034 14.576 1.00 1.77 ATOM 240 CG GLN 18 -0.466 28.284 15.910 1.00 1.77 ATOM 243 CD GLN 18 -1.698 27.599 16.489 1.00 1.77 ATOM 244 OE1 GLN 18 -2.291 26.719 15.885 1.00 1.77 ATOM 245 NE2 GLN 18 -2.105 27.925 17.694 1.00 1.77 ATOM 248 C GLN 18 -1.162 28.631 12.030 1.00 1.77 ATOM 249 O GLN 18 -1.083 29.829 11.778 1.00 1.77 ATOM 250 N ASN 19 -1.576 27.692 11.150 1.00 2.48 ATOM 252 CA ASN 19 -1.484 27.739 9.671 1.00 2.48 ATOM 254 CB ASN 19 -1.329 26.306 9.120 1.00 2.48 ATOM 257 CG ASN 19 -0.363 26.295 7.947 1.00 2.48 ATOM 258 OD1 ASN 19 -0.748 26.157 6.795 1.00 2.48 ATOM 259 ND2 ASN 19 0.913 26.496 8.217 1.00 2.48 ATOM 262 C ASN 19 -2.463 28.645 8.890 1.00 2.48 ATOM 263 O ASN 19 -2.951 28.286 7.812 1.00 2.48 ATOM 264 N TRP 20 -2.741 29.826 9.434 1.00 1.94 ATOM 266 CA TRP 20 -3.726 30.808 9.010 1.00 1.94 ATOM 268 CB TRP 20 -5.074 30.294 9.540 1.00 1.94 ATOM 271 CG TRP 20 -6.281 31.009 9.050 1.00 1.94 ATOM 272 CD1 TRP 20 -7.034 31.870 9.754 1.00 1.94 ATOM 274 NE1 TRP 20 -8.009 32.410 8.934 1.00 1.94 ATOM 276 CE2 TRP 20 -7.989 31.832 7.682 1.00 1.94 ATOM 277 CZ2 TRP 20 -8.756 31.995 6.521 1.00 1.94 ATOM 279 CH2 TRP 20 -8.535 31.121 5.442 1.00 1.94 ATOM 281 CZ3 TRP 20 -7.583 30.094 5.541 1.00 1.94 ATOM 283 CE3 TRP 20 -6.828 29.935 6.716 1.00 1.94 ATOM 285 CD2 TRP 20 -6.959 30.851 7.775 1.00 1.94 ATOM 286 C TRP 20 -3.359 32.198 9.583 1.00 1.94 ATOM 287 O TRP 20 -2.912 32.312 10.728 1.00 1.94 ATOM 288 N ALA 21 -3.540 33.274 8.801 1.00 1.76 ATOM 290 CA ALA 21 -3.145 34.642 9.189 1.00 1.76 ATOM 292 CB ALA 21 -3.498 35.603 8.043 1.00 1.76 ATOM 296 C ALA 21 -3.805 35.105 10.498 1.00 1.76 ATOM 297 O ALA 21 -3.114 35.623 11.372 1.00 1.76 ATOM 298 N SER 22 -5.102 34.822 10.655 1.00 1.77 ATOM 300 CA SER 22 -5.834 35.031 11.907 1.00 1.77 ATOM 302 CB SER 22 -7.291 34.565 11.766 1.00 1.77 ATOM 305 OG SER 22 -8.195 35.636 11.775 1.00 1.77 ATOM 307 C SER 22 -5.154 34.372 13.105 1.00 1.77 ATOM 308 O SER 22 -4.853 35.044 14.087 1.00 1.77 ATOM 309 N LEU 23 -4.815 33.086 12.986 1.00 1.46 ATOM 311 CA LEU 23 -4.193 32.320 14.063 1.00 1.46 ATOM 313 CB LEU 23 -4.137 30.839 13.647 1.00 1.46 ATOM 316 CG LEU 23 -4.716 29.858 14.680 1.00 1.46 ATOM 318 CD1 LEU 23 -4.397 28.440 14.219 1.00 1.46 ATOM 322 CD2 LEU 23 -4.208 30.057 16.109 1.00 1.46 ATOM 326 C LEU 23 -2.821 32.877 14.460 1.00 1.46 ATOM 327 O LEU 23 -2.531 33.018 15.644 1.00 1.46 ATOM 328 N ALA 24 -1.999 33.297 13.487 1.00 1.28 ATOM 330 CA ALA 24 -0.743 33.977 13.830 1.00 1.28 ATOM 332 CB ALA 24 0.274 33.843 12.712 1.00 1.28 ATOM 336 C ALA 24 -0.907 35.417 14.369 1.00 1.28 ATOM 337 O ALA 24 -0.026 35.882 15.090 1.00 1.28 ATOM 338 N ALA 25 -2.005 36.128 14.094 1.00 1.27 ATOM 340 CA ALA 25 -2.286 37.396 14.783 1.00 1.27 ATOM 342 CB ALA 25 -3.397 38.149 14.038 1.00 1.27 ATOM 346 C ALA 25 -2.637 37.161 16.260 1.00 1.27 ATOM 347 O ALA 25 -2.116 37.855 17.134 1.00 1.27 ATOM 348 N ASN 26 -3.443 36.125 16.518 1.00 1.55 ATOM 350 CA ASN 26 -3.799 35.637 17.850 1.00 1.55 ATOM 352 CB ASN 26 -4.809 34.485 17.679 1.00 1.55 ATOM 355 CG ASN 26 -5.833 34.426 18.799 1.00 1.55 ATOM 356 OD1 ASN 26 -5.535 34.552 19.976 1.00 1.55 ATOM 357 ND2 ASN 26 -7.092 34.272 18.468 1.00 1.55 ATOM 360 C ASN 26 -2.556 35.260 18.682 1.00 1.55 ATOM 361 O ASN 26 -2.374 35.777 19.782 1.00 1.55 ATOM 362 N GLU 27 -1.636 34.467 18.113 1.00 1.73 ATOM 364 CA GLU 27 -0.351 34.099 18.742 1.00 1.73 ATOM 366 CB GLU 27 0.382 33.062 17.876 1.00 1.73 ATOM 369 CG GLU 27 -0.280 31.678 17.865 1.00 1.73 ATOM 372 CD GLU 27 -0.220 30.924 19.205 1.00 1.73 ATOM 373 OE1 GLU 27 -0.743 29.784 19.233 1.00 1.73 ATOM 374 OE2 GLU 27 0.351 31.459 20.181 1.00 1.73 ATOM 375 C GLU 27 0.586 35.296 18.970 1.00 1.73 ATOM 376 O GLU 27 1.183 35.432 20.038 1.00 1.73 ATOM 377 N LEU 28 0.680 36.241 18.020 1.00 1.71 ATOM 379 CA LEU 28 1.389 37.515 18.254 1.00 1.71 ATOM 381 CB LEU 28 1.669 38.222 16.910 1.00 1.71 ATOM 384 CG LEU 28 2.727 37.566 15.999 1.00 1.71 ATOM 386 CD1 LEU 28 2.969 38.478 14.794 1.00 1.71 ATOM 390 CD2 LEU 28 4.082 37.375 16.685 1.00 1.71 ATOM 394 C LEU 28 0.664 38.466 19.228 1.00 1.71 ATOM 395 O LEU 28 1.177 39.561 19.501 1.00 1.71 ATOM 396 N ARG 29 -0.507 38.070 19.753 1.00 1.87 ATOM 398 CA ARG 29 -1.424 38.832 20.616 1.00 1.87 ATOM 400 CB ARG 29 -0.973 38.620 22.082 1.00 1.87 ATOM 403 CG ARG 29 -1.594 39.446 23.234 1.00 1.87 ATOM 406 CD ARG 29 -0.884 40.751 23.675 1.00 1.87 ATOM 409 NE ARG 29 0.591 40.637 23.703 1.00 1.87 ATOM 411 CZ ARG 29 1.398 40.821 22.668 1.00 1.87 ATOM 412 NH1 ARG 29 2.636 40.422 22.717 1.00 1.87 ATOM 415 NH2 ARG 29 1.001 41.361 21.556 1.00 1.87 ATOM 418 C ARG 29 -1.683 40.242 20.075 1.00 1.87 ATOM 419 O ARG 29 -1.673 41.232 20.806 1.00 1.87 ATOM 420 N VAL 30 -1.922 40.330 18.768 1.00 1.72 ATOM 422 CA VAL 30 -2.566 41.488 18.140 1.00 1.72 ATOM 424 CB VAL 30 -1.809 42.018 16.916 1.00 1.72 ATOM 426 CG1 VAL 30 -2.630 43.106 16.207 1.00 1.72 ATOM 430 CG2 VAL 30 -0.493 42.653 17.380 1.00 1.72 ATOM 434 C VAL 30 -4.007 41.110 17.826 1.00 1.72 ATOM 435 O VAL 30 -4.273 40.071 17.227 1.00 1.72 ATOM 436 N THR 31 -4.934 41.947 18.295 1.00 2.38 ATOM 438 CA THR 31 -6.377 41.716 18.206 1.00 2.38 ATOM 440 CB THR 31 -7.143 42.948 18.704 1.00 2.38 ATOM 442 CG2 THR 31 -8.651 42.725 18.813 1.00 2.38 ATOM 446 OG1 THR 31 -6.677 43.268 19.996 1.00 2.38 ATOM 448 C THR 31 -6.818 41.347 16.801 1.00 2.38 ATOM 449 O THR 31 -6.417 41.999 15.843 1.00 2.38 ATOM 450 N GLU 32 -7.671 40.328 16.690 1.00 2.87 ATOM 452 CA GLU 32 -7.909 39.571 15.455 1.00 2.87 ATOM 454 CB GLU 32 -8.290 38.119 15.832 1.00 2.87 ATOM 457 CG GLU 32 -7.856 37.130 14.741 1.00 2.87 ATOM 460 CD GLU 32 -8.386 35.707 14.978 1.00 2.87 ATOM 461 OE1 GLU 32 -9.163 35.239 14.114 1.00 2.87 ATOM 462 OE2 GLU 32 -7.970 35.066 15.969 1.00 2.87 ATOM 463 C GLU 32 -8.881 40.219 14.441 1.00 2.87 ATOM 464 O GLU 32 -9.841 39.605 13.984 1.00 2.87 ATOM 465 N ARG 33 -8.615 41.474 14.060 1.00 2.81 ATOM 467 CA ARG 33 -8.989 42.046 12.756 1.00 2.81 ATOM 469 CB ARG 33 -10.276 42.891 12.786 1.00 2.81 ATOM 472 CG ARG 33 -11.488 41.953 12.918 1.00 2.81 ATOM 475 CD ARG 33 -12.822 42.540 12.448 1.00 2.81 ATOM 478 NE ARG 33 -13.827 41.458 12.409 1.00 2.81 ATOM 480 CZ ARG 33 -14.959 41.409 11.731 1.00 2.81 ATOM 481 NH1 ARG 33 -15.661 40.307 11.732 1.00 2.81 ATOM 484 NH2 ARG 33 -15.400 42.428 11.047 1.00 2.81 ATOM 487 C ARG 33 -7.803 42.698 12.017 1.00 2.81 ATOM 488 O ARG 33 -7.644 42.404 10.835 1.00 2.81 ATOM 489 N PRO 34 -6.905 43.470 12.657 1.00 3.13 ATOM 490 CD PRO 34 -7.143 44.299 13.830 1.00 3.13 ATOM 493 CG PRO 34 -5.770 44.821 14.249 1.00 3.13 ATOM 496 CB PRO 34 -5.013 44.913 12.926 1.00 3.13 ATOM 499 CA PRO 34 -5.594 43.773 12.079 1.00 3.13 ATOM 501 C PRO 34 -4.665 42.552 11.995 1.00 3.13 ATOM 502 O PRO 34 -4.117 42.097 12.998 1.00 3.13 ATOM 503 N PHE 35 -4.425 42.079 10.770 1.00 2.48 ATOM 505 CA PHE 35 -3.319 41.188 10.392 1.00 2.48 ATOM 507 CB PHE 35 -3.548 40.644 8.969 1.00 2.48 ATOM 510 CG PHE 35 -4.787 39.807 8.678 1.00 2.48 ATOM 511 CD1 PHE 35 -5.155 39.609 7.331 1.00 2.48 ATOM 513 CE1 PHE 35 -6.293 38.849 7.004 1.00 2.48 ATOM 515 CZ PHE 35 -7.070 38.277 8.027 1.00 2.48 ATOM 517 CE2 PHE 35 -6.707 38.461 9.372 1.00 2.48 ATOM 519 CD2 PHE 35 -5.566 39.217 9.698 1.00 2.48 ATOM 521 C PHE 35 -1.949 41.910 10.513 1.00 2.48 ATOM 522 O PHE 35 -1.295 42.271 9.528 1.00 2.48 ATOM 523 N TRP 36 -1.463 42.080 11.749 1.00 2.40 ATOM 525 CA TRP 36 -0.082 42.522 11.978 1.00 2.40 ATOM 527 CB TRP 36 0.229 42.676 13.471 1.00 2.40 ATOM 530 CG TRP 36 1.583 43.245 13.801 1.00 2.40 ATOM 531 CD1 TRP 36 2.213 44.230 13.117 1.00 2.40 ATOM 533 NE1 TRP 36 3.428 44.514 13.707 1.00 2.40 ATOM 535 CE2 TRP 36 3.640 43.741 14.825 1.00 2.40 ATOM 536 CZ2 TRP 36 4.686 43.679 15.756 1.00 2.40 ATOM 538 CH2 TRP 36 4.620 42.737 16.796 1.00 2.40 ATOM 540 CZ3 TRP 36 3.516 41.869 16.883 1.00 2.40 ATOM 542 CE3 TRP 36 2.470 41.944 15.941 1.00 2.40 ATOM 544 CD2 TRP 36 2.494 42.891 14.893 1.00 2.40 ATOM 545 C TRP 36 0.933 41.597 11.293 1.00 2.40 ATOM 546 O TRP 36 1.959 42.059 10.816 1.00 2.40 ATOM 547 N ILE 37 0.589 40.316 11.146 1.00 1.85 ATOM 549 CA ILE 37 1.264 39.368 10.255 1.00 1.85 ATOM 551 CB ILE 37 0.520 38.012 10.308 1.00 1.85 ATOM 553 CG2 ILE 37 0.946 37.046 9.187 1.00 1.85 ATOM 557 CG1 ILE 37 0.675 37.341 11.690 1.00 1.85 ATOM 560 CD1 ILE 37 2.085 36.812 11.983 1.00 1.85 ATOM 564 C ILE 37 1.345 39.882 8.816 1.00 1.85 ATOM 565 O ILE 37 2.433 39.846 8.248 1.00 1.85 ATOM 566 N SER 38 0.244 40.358 8.219 1.00 1.98 ATOM 568 CA SER 38 0.282 40.868 6.846 1.00 1.98 ATOM 570 CB SER 38 -1.086 40.927 6.160 1.00 1.98 ATOM 573 OG SER 38 -1.821 42.079 6.510 1.00 1.98 ATOM 575 C SER 38 1.013 42.203 6.702 1.00 1.98 ATOM 576 O SER 38 1.471 42.506 5.604 1.00 1.98 ATOM 577 N SER 39 1.190 42.960 7.798 1.00 2.50 ATOM 579 CA SER 39 2.064 44.156 7.814 1.00 2.50 ATOM 581 CB SER 39 1.363 45.329 8.507 1.00 2.50 ATOM 584 OG SER 39 1.739 46.562 7.903 1.00 2.50 ATOM 586 C SER 39 3.505 43.918 8.315 1.00 2.50 ATOM 587 O SER 39 4.308 44.855 8.370 1.00 2.50 ATOM 588 N PHE 40 3.840 42.667 8.648 1.00 2.16 ATOM 590 CA PHE 40 5.192 42.137 8.851 1.00 2.16 ATOM 592 CB PHE 40 5.170 41.040 9.934 1.00 2.16 ATOM 595 CG PHE 40 5.795 41.388 11.270 1.00 2.16 ATOM 596 CD1 PHE 40 5.101 41.107 12.460 1.00 2.16 ATOM 598 CE1 PHE 40 5.728 41.291 13.704 1.00 2.16 ATOM 600 CZ PHE 40 7.045 41.776 13.766 1.00 2.16 ATOM 602 CE2 PHE 40 7.738 42.076 12.580 1.00 2.16 ATOM 604 CD2 PHE 40 7.115 41.875 11.334 1.00 2.16 ATOM 606 C PHE 40 5.712 41.550 7.541 1.00 2.16 ATOM 607 O PHE 40 6.807 41.901 7.090 1.00 2.16 ATOM 608 N ILE 41 4.895 40.727 6.874 1.00 2.08 ATOM 610 CA ILE 41 5.155 40.367 5.486 1.00 2.08 ATOM 612 CB ILE 41 4.496 39.066 5.027 1.00 2.08 ATOM 614 CG2 ILE 41 4.767 37.952 6.048 1.00 2.08 ATOM 618 CG1 ILE 41 3.005 39.195 4.748 1.00 2.08 ATOM 621 CD1 ILE 41 2.536 38.039 3.879 1.00 2.08 ATOM 625 C ILE 41 4.969 41.566 4.546 1.00 2.08 ATOM 626 O ILE 41 4.380 42.601 4.878 1.00 2.08 ATOM 627 N GLY 42 5.596 41.447 3.381 1.00 2.81 ATOM 629 CA GLY 42 5.669 42.454 2.327 1.00 2.81 ATOM 632 C GLY 42 6.143 43.864 2.692 1.00 2.81 ATOM 633 O GLY 42 6.083 44.717 1.818 1.00 2.81 ATOM 634 N ARG 43 6.576 44.160 3.931 1.00 4.26 ATOM 636 CA ARG 43 6.570 45.495 4.590 1.00 4.26 ATOM 638 CB ARG 43 7.694 46.383 4.021 1.00 4.26 ATOM 641 CG ARG 43 9.115 45.816 4.239 1.00 4.26 ATOM 644 CD ARG 43 9.976 45.791 2.963 1.00 4.26 ATOM 647 NE ARG 43 9.641 44.654 2.079 1.00 4.26 ATOM 649 CZ ARG 43 8.928 44.675 0.965 1.00 4.26 ATOM 650 NH1 ARG 43 8.657 43.575 0.333 1.00 4.26 ATOM 653 NH2 ARG 43 8.409 45.752 0.454 1.00 4.26 ATOM 656 C ARG 43 5.213 46.234 4.595 1.00 4.26 ATOM 657 O ARG 43 4.894 46.916 5.567 1.00 4.26 ATOM 658 N SER 44 4.412 46.035 3.555 1.00 6.86 ATOM 660 CA SER 44 2.960 46.187 3.404 1.00 6.86 ATOM 662 CB SER 44 2.448 44.893 4.033 1.00 6.86 ATOM 665 OG SER 44 2.654 43.831 3.125 1.00 6.86 ATOM 667 C SER 44 2.207 47.411 3.981 1.00 6.86 ATOM 668 O SER 44 1.700 47.302 5.105 1.00 6.86 ATOM 669 N LYS 45 2.054 48.529 3.224 1.00 6.05 ATOM 671 CA LYS 45 1.366 49.803 3.605 1.00 6.05 ATOM 673 CB LYS 45 2.423 50.884 4.003 1.00 6.05 ATOM 676 CG LYS 45 2.849 50.993 5.492 1.00 6.05 ATOM 679 CD LYS 45 3.101 49.642 6.164 1.00 6.05 ATOM 682 CE LYS 45 3.887 49.601 7.475 1.00 6.05 ATOM 685 NZ LYS 45 4.046 48.184 7.915 1.00 6.05 ATOM 689 C LYS 45 0.312 50.316 2.606 1.00 6.05 ATOM 690 O LYS 45 -0.796 49.806 2.677 1.00 6.05 TER END