####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS116_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 32 - 42 4.96 57.42 LONGEST_CONTINUOUS_SEGMENT: 11 33 - 43 4.70 58.50 LONGEST_CONTINUOUS_SEGMENT: 11 34 - 44 4.94 59.88 LCS_AVERAGE: 23.40 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 27 - 33 1.86 41.38 LONGEST_CONTINUOUS_SEGMENT: 7 28 - 34 1.93 40.90 LCS_AVERAGE: 11.62 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 5 16 - 20 0.80 40.78 LCS_AVERAGE: 8.63 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 4 10 3 3 4 4 5 6 6 7 7 8 9 9 9 9 9 11 11 12 12 13 LCS_GDT V 3 V 3 4 4 10 3 3 4 4 5 6 6 7 7 8 9 9 9 9 9 11 11 12 12 13 LCS_GDT Q 4 Q 4 4 4 10 3 3 4 4 5 6 6 7 7 8 9 9 9 9 9 11 11 12 12 13 LCS_GDT G 5 G 5 4 5 10 0 3 4 4 5 6 6 7 7 8 9 9 9 9 10 11 12 13 13 14 LCS_GDT P 6 P 6 4 5 10 3 3 4 4 5 6 6 6 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT W 7 W 7 4 5 10 3 3 4 4 5 6 6 7 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT V 8 V 8 4 5 10 3 3 4 4 5 6 6 7 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT G 9 G 9 4 5 10 0 3 4 4 5 6 6 7 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT S 10 S 10 3 3 10 0 3 3 4 4 6 6 6 7 8 9 9 10 10 11 11 12 13 13 14 LCS_GDT S 11 S 11 3 3 10 3 3 3 3 3 4 4 6 7 7 8 9 10 10 11 11 12 13 13 14 LCS_GDT Y 12 Y 12 3 3 10 3 3 3 3 3 4 4 5 7 7 8 9 10 10 11 11 12 13 13 14 LCS_GDT V 13 V 13 3 3 10 3 3 3 3 3 4 4 5 6 7 8 9 10 10 11 11 12 13 13 14 LCS_GDT A 14 A 14 3 3 10 3 3 3 3 3 4 5 5 6 8 8 9 10 10 11 11 12 13 13 14 LCS_GDT E 15 E 15 3 6 10 3 3 4 6 6 6 7 8 8 8 8 9 10 10 11 11 12 13 13 14 LCS_GDT T 16 T 16 5 6 10 3 4 5 6 6 6 7 8 8 8 8 9 9 10 11 11 12 13 13 14 LCS_GDT G 17 G 17 5 6 10 3 4 5 6 6 6 7 8 8 8 8 9 9 10 10 11 12 13 13 14 LCS_GDT Q 18 Q 18 5 6 10 3 4 5 6 6 6 7 8 8 8 8 9 9 10 10 10 11 11 13 14 LCS_GDT N 19 N 19 5 6 10 3 4 5 6 6 6 7 8 8 8 8 9 9 10 10 11 11 11 11 13 LCS_GDT W 20 W 20 5 6 10 3 4 5 6 6 6 7 8 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT A 21 A 21 4 6 10 3 4 4 5 6 6 7 8 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT S 22 S 22 4 6 10 3 4 4 5 6 6 7 8 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT L 23 L 23 3 3 10 3 3 3 3 3 4 5 7 7 7 8 9 9 10 10 11 11 11 12 13 LCS_GDT A 24 A 24 3 3 10 3 3 3 3 3 4 5 7 7 7 8 9 9 10 10 11 11 11 12 13 LCS_GDT A 25 A 25 3 3 10 3 3 3 3 3 4 5 7 7 7 8 9 9 10 10 11 11 11 12 13 LCS_GDT N 26 N 26 3 3 10 3 3 3 3 4 4 5 7 7 7 8 9 9 10 10 11 11 11 12 13 LCS_GDT E 27 E 27 4 7 10 3 3 4 6 6 8 8 8 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT L 28 L 28 4 7 10 3 4 5 6 6 8 8 8 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT R 29 R 29 4 7 10 3 4 5 6 6 8 8 8 8 8 8 9 9 10 10 11 11 11 12 13 LCS_GDT V 30 V 30 4 7 10 3 4 5 6 6 8 8 8 8 8 8 9 9 10 10 10 10 11 12 13 LCS_GDT T 31 T 31 4 7 10 3 4 5 6 6 8 8 8 8 8 8 9 9 10 10 10 10 10 12 13 LCS_GDT E 32 E 32 4 7 11 3 4 5 6 6 8 8 8 8 8 8 9 9 10 10 10 11 11 11 12 LCS_GDT R 33 R 33 4 7 11 3 4 5 6 6 8 8 8 8 8 10 10 10 10 10 10 11 12 12 12 LCS_GDT P 34 P 34 4 7 11 3 4 5 6 6 8 8 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT F 35 F 35 4 6 11 3 4 5 6 6 6 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT W 36 W 36 4 6 11 3 4 5 6 6 6 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT I 37 I 37 3 6 11 3 3 5 6 6 6 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT S 38 S 38 3 6 11 1 3 4 6 6 6 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT S 39 S 39 3 4 11 0 3 4 4 4 5 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT F 40 F 40 3 4 11 2 3 4 4 4 5 6 7 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT I 41 I 41 4 5 11 0 3 4 5 5 5 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT G 42 G 42 4 5 11 3 4 4 5 5 5 6 8 8 9 10 10 10 10 11 11 11 12 12 12 LCS_GDT R 43 R 43 4 5 11 3 4 4 5 5 5 6 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT S 44 S 44 4 5 11 3 4 4 5 5 5 6 7 8 8 8 9 9 10 11 11 11 12 12 12 LCS_GDT K 45 K 45 4 5 10 3 4 4 5 5 5 5 7 8 8 8 8 8 9 10 10 10 10 11 11 LCS_AVERAGE LCS_A: 14.55 ( 8.63 11.62 23.40 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 3 4 5 6 6 8 8 8 8 9 10 10 10 10 11 11 12 13 13 14 GDT PERCENT_AT 6.82 9.09 11.36 13.64 13.64 18.18 18.18 18.18 18.18 20.45 22.73 22.73 22.73 22.73 25.00 25.00 27.27 29.55 29.55 31.82 GDT RMS_LOCAL 0.08 0.46 0.80 1.31 1.31 2.16 2.16 2.16 2.16 3.63 3.91 3.91 3.91 3.91 4.94 4.94 5.83 6.19 6.19 6.88 GDT RMS_ALL_AT 38.67 69.29 40.78 40.85 40.85 41.61 41.61 41.61 41.61 58.33 57.75 57.75 57.75 57.75 59.88 59.88 49.18 50.83 50.83 48.61 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 65.129 0 0.033 0.056 68.479 0.000 0.000 - LGA V 3 V 3 68.987 0 0.075 0.085 70.844 0.000 0.000 70.709 LGA Q 4 Q 4 74.738 0 0.113 0.512 78.195 0.000 0.000 77.881 LGA G 5 G 5 76.894 0 0.518 0.518 76.894 0.000 0.000 - LGA P 6 P 6 76.546 0 0.709 0.649 76.827 0.000 0.000 76.255 LGA W 7 W 7 73.010 0 0.405 1.178 78.438 0.000 0.000 78.438 LGA V 8 V 8 68.024 0 0.661 0.664 70.354 0.000 0.000 66.125 LGA G 9 G 9 64.274 0 0.555 0.555 65.691 0.000 0.000 - LGA S 10 S 10 58.628 0 0.661 0.656 61.120 0.000 0.000 60.027 LGA S 11 S 11 54.544 0 0.642 0.967 56.270 0.000 0.000 55.743 LGA Y 12 Y 12 50.496 0 0.640 1.363 52.262 0.000 0.000 50.759 LGA V 13 V 13 45.333 0 0.613 0.610 47.992 0.000 0.000 43.422 LGA A 14 A 14 40.385 0 0.628 0.599 42.334 0.000 0.000 - LGA E 15 E 15 37.547 0 0.650 1.332 39.360 0.000 0.000 38.508 LGA T 16 T 16 33.677 0 0.702 0.604 35.108 0.000 0.000 33.613 LGA G 17 G 17 32.438 0 0.442 0.442 33.772 0.000 0.000 - LGA Q 18 Q 18 33.175 0 0.050 1.230 33.330 0.000 0.000 30.141 LGA N 19 N 19 34.397 0 0.635 0.868 36.736 0.000 0.000 34.809 LGA W 20 W 20 32.829 0 0.129 1.103 39.555 0.000 0.000 39.223 LGA A 21 A 21 29.771 0 0.643 0.600 31.328 0.000 0.000 - LGA S 22 S 22 26.601 0 0.626 0.602 27.752 0.000 0.000 25.564 LGA L 23 L 23 20.377 0 0.653 1.406 22.791 0.000 0.000 21.258 LGA A 24 A 24 15.807 0 0.634 0.603 17.565 0.000 0.000 - LGA A 25 A 25 14.459 0 0.621 0.610 15.642 0.000 0.000 - LGA N 26 N 26 9.543 0 0.630 0.825 11.567 0.000 0.000 9.875 LGA E 27 E 27 2.912 0 0.687 1.428 5.284 29.091 38.586 2.138 LGA L 28 L 28 2.318 0 0.658 1.397 7.718 33.636 19.318 7.718 LGA R 29 R 29 1.236 0 0.559 1.284 10.505 73.636 30.248 10.505 LGA V 30 V 30 0.477 0 0.222 1.169 3.248 100.000 78.701 3.248 LGA T 31 T 31 1.289 0 0.697 1.428 4.562 52.273 39.481 2.952 LGA E 32 E 32 2.429 0 0.047 1.310 10.090 42.273 19.394 10.090 LGA R 33 R 33 2.131 0 0.049 1.298 11.995 49.091 18.017 11.995 LGA P 34 P 34 3.119 0 0.100 0.108 5.791 20.909 23.896 2.701 LGA F 35 F 35 8.805 0 0.168 1.113 17.244 0.000 0.000 17.244 LGA W 36 W 36 12.963 0 0.063 1.242 17.262 0.000 0.000 14.773 LGA I 37 I 37 19.622 0 0.647 0.525 24.231 0.000 0.000 24.231 LGA S 38 S 38 22.792 0 0.680 0.620 26.396 0.000 0.000 21.684 LGA S 39 S 39 26.677 0 0.723 0.882 28.714 0.000 0.000 25.495 LGA F 40 F 40 32.446 0 0.657 1.447 36.161 0.000 0.000 35.014 LGA I 41 I 41 35.452 0 0.133 1.210 36.545 0.000 0.000 31.473 LGA G 42 G 42 40.385 0 0.594 0.594 42.739 0.000 0.000 - LGA R 43 R 43 44.549 0 0.099 1.295 48.317 0.000 0.000 48.317 LGA S 44 S 44 50.991 0 0.026 0.737 52.352 0.000 0.000 51.602 LGA K 45 K 45 56.087 0 0.073 0.561 61.656 0.000 0.000 61.502 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 32.057 32.048 32.203 9.112 6.083 3.169 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 8 2.16 16.477 15.934 0.353 LGA_LOCAL RMSD: 2.163 Number of atoms: 8 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 41.610 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 32.057 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.373175 * X + -0.426207 * Y + -0.824068 * Z + -89.228477 Y_new = 0.705853 * X + 0.446008 * Y + -0.550317 * Z + 89.731384 Z_new = 0.602089 * X + -0.787035 * Y + 0.134401 * Z + -83.424484 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.057129 -0.646115 -1.401659 [DEG: 117.8648 -37.0197 -80.3092 ] ZXZ: -0.982006 1.435987 2.488555 [DEG: -56.2648 82.2760 142.5837 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS116_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 8 2.16 15.934 32.06 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS116_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT 2zooA1 ATOM 9 N ALA 2 -0.632 0.775 67.102 1.00177.93 N ATOM 10 CA ALA 2 0.782 0.935 67.250 1.00177.93 C ATOM 11 CB ALA 2 1.179 1.932 68.352 1.00177.93 C ATOM 12 C ALA 2 1.323 -0.400 67.629 1.00177.93 C ATOM 13 O ALA 2 0.638 -1.201 68.263 1.00177.93 O ATOM 14 N VAL 3 2.574 -0.681 67.225 1.00 66.86 N ATOM 15 CA VAL 3 3.149 -1.951 67.541 1.00 66.86 C ATOM 16 CB VAL 3 3.693 -2.669 66.341 1.00 66.86 C ATOM 17 CG1 VAL 3 4.406 -3.949 66.807 1.00 66.86 C ATOM 18 CG2 VAL 3 2.536 -2.915 65.357 1.00 66.86 C ATOM 19 C VAL 3 4.294 -1.707 68.463 1.00 66.86 C ATOM 20 O VAL 3 5.003 -0.708 68.344 1.00 66.86 O ATOM 21 N GLN 4 4.489 -2.613 69.438 1.00156.94 N ATOM 22 CA GLN 4 5.596 -2.426 70.323 1.00156.94 C ATOM 23 CB GLN 4 5.462 -3.151 71.675 1.00156.94 C ATOM 24 CG GLN 4 4.306 -2.676 72.555 1.00156.94 C ATOM 25 CD GLN 4 4.415 -3.441 73.867 1.00156.94 C ATOM 26 OE1 GLN 4 5.461 -4.013 74.172 1.00156.94 O ATOM 27 NE2 GLN 4 3.316 -3.452 74.668 1.00156.94 N ATOM 28 C GLN 4 6.774 -3.031 69.641 1.00156.94 C ATOM 29 O GLN 4 6.794 -4.230 69.367 1.00156.94 O ATOM 30 N GLY 5 7.791 -2.205 69.339 1.00 40.22 N ATOM 31 CA GLY 5 8.956 -2.727 68.691 1.00 40.22 C ATOM 32 C GLY 5 8.519 -3.369 67.414 1.00 40.22 C ATOM 33 O GLY 5 8.952 -4.480 67.115 1.00 40.22 O ATOM 34 N PRO 6 7.663 -2.709 66.670 1.00 79.88 N ATOM 35 CA PRO 6 7.147 -3.279 65.455 1.00 79.88 C ATOM 36 CD PRO 6 7.674 -1.254 66.605 1.00 79.88 C ATOM 37 CB PRO 6 6.338 -2.167 64.798 1.00 79.88 C ATOM 38 CG PRO 6 7.111 -0.903 65.217 1.00 79.88 C ATOM 39 C PRO 6 8.317 -3.632 64.604 1.00 79.88 C ATOM 40 O PRO 6 9.288 -2.876 64.590 1.00 79.88 O ATOM 41 N TRP 7 8.268 -4.773 63.895 1.00255.08 N ATOM 42 CA TRP 7 9.418 -5.064 63.106 1.00255.08 C ATOM 43 CB TRP 7 9.428 -6.470 62.489 1.00255.08 C ATOM 44 CG TRP 7 10.719 -6.774 61.773 1.00255.08 C ATOM 45 CD2 TRP 7 11.901 -7.247 62.435 1.00255.08 C ATOM 46 CD1 TRP 7 11.036 -6.652 60.453 1.00255.08 C ATOM 47 NE1 TRP 7 12.344 -7.024 60.249 1.00255.08 N ATOM 48 CE2 TRP 7 12.888 -7.391 61.462 1.00255.08 C ATOM 49 CE3 TRP 7 12.145 -7.530 63.749 1.00255.08 C ATOM 50 CZ2 TRP 7 14.142 -7.823 61.789 1.00255.08 C ATOM 51 CZ3 TRP 7 13.408 -7.973 64.074 1.00255.08 C ATOM 52 CH2 TRP 7 14.388 -8.116 63.113 1.00255.08 C ATOM 53 C TRP 7 9.418 -4.063 62.004 1.00255.08 C ATOM 54 O TRP 7 8.365 -3.709 61.473 1.00255.08 O ATOM 55 N VAL 8 10.608 -3.551 61.648 1.00 57.29 N ATOM 56 CA VAL 8 10.635 -2.555 60.625 1.00 57.29 C ATOM 57 CB VAL 8 11.244 -1.259 61.069 1.00 57.29 C ATOM 58 CG1 VAL 8 11.284 -0.302 59.865 1.00 57.29 C ATOM 59 CG2 VAL 8 10.437 -0.723 62.266 1.00 57.29 C ATOM 60 C VAL 8 11.461 -3.070 59.501 1.00 57.29 C ATOM 61 O VAL 8 12.387 -3.858 59.691 1.00 57.29 O ATOM 62 N GLY 9 11.106 -2.642 58.278 1.00112.69 N ATOM 63 CA GLY 9 11.831 -3.021 57.109 1.00112.69 C ATOM 64 C GLY 9 11.927 -1.779 56.298 1.00112.69 C ATOM 65 O GLY 9 11.118 -0.864 56.457 1.00112.69 O ATOM 66 N SER 10 12.922 -1.703 55.402 1.00118.55 N ATOM 67 CA SER 10 13.022 -0.498 54.645 1.00118.55 C ATOM 68 CB SER 10 14.390 0.192 54.765 1.00118.55 C ATOM 69 OG SER 10 15.405 -0.641 54.221 1.00118.55 O ATOM 70 C SER 10 12.823 -0.831 53.209 1.00118.55 C ATOM 71 O SER 10 13.295 -1.852 52.713 1.00118.55 O ATOM 72 N SER 11 12.081 0.043 52.512 1.00199.21 N ATOM 73 CA SER 11 11.882 -0.112 51.107 1.00199.21 C ATOM 74 CB SER 11 10.402 -0.113 50.681 1.00199.21 C ATOM 75 OG SER 11 9.732 -1.228 51.248 1.00199.21 O ATOM 76 C SER 11 12.502 1.106 50.529 1.00199.21 C ATOM 77 O SER 11 12.566 2.141 51.188 1.00199.21 O ATOM 78 N TYR 12 13.003 1.023 49.287 1.00241.44 N ATOM 79 CA TYR 12 13.619 2.210 48.790 1.00241.44 C ATOM 80 CB TYR 12 15.020 1.980 48.200 1.00241.44 C ATOM 81 CG TYR 12 15.584 3.318 47.871 1.00241.44 C ATOM 82 CD1 TYR 12 16.093 4.121 48.867 1.00241.44 C ATOM 83 CD2 TYR 12 15.615 3.768 46.572 1.00241.44 C ATOM 84 CE1 TYR 12 16.620 5.357 48.574 1.00241.44 C ATOM 85 CE2 TYR 12 16.141 5.003 46.273 1.00241.44 C ATOM 86 CZ TYR 12 16.643 5.800 47.275 1.00241.44 C ATOM 87 OH TYR 12 17.180 7.068 46.969 1.00241.44 O ATOM 88 C TYR 12 12.745 2.742 47.711 1.00241.44 C ATOM 89 O TYR 12 12.446 2.057 46.733 1.00241.44 O ATOM 90 N VAL 13 12.292 3.993 47.889 1.00 69.31 N ATOM 91 CA VAL 13 11.463 4.613 46.906 1.00 69.31 C ATOM 92 CB VAL 13 10.156 5.101 47.460 1.00 69.31 C ATOM 93 CG1 VAL 13 9.415 5.883 46.364 1.00 69.31 C ATOM 94 CG2 VAL 13 9.374 3.894 48.003 1.00 69.31 C ATOM 95 C VAL 13 12.215 5.807 46.431 1.00 69.31 C ATOM 96 O VAL 13 12.822 6.526 47.224 1.00 69.31 O ATOM 97 N ALA 14 12.216 6.038 45.106 1.00202.39 N ATOM 98 CA ALA 14 12.903 7.192 44.619 1.00202.39 C ATOM 99 CB ALA 14 13.748 6.927 43.362 1.00202.39 C ATOM 100 C ALA 14 11.849 8.176 44.249 1.00202.39 C ATOM 101 O ALA 14 10.940 7.872 43.478 1.00202.39 O ATOM 102 N GLU 15 11.941 9.393 44.813 1.00305.45 N ATOM 103 CA GLU 15 10.954 10.378 44.500 1.00305.45 C ATOM 104 CB GLU 15 9.970 10.644 45.652 1.00305.45 C ATOM 105 CG GLU 15 8.860 11.628 45.280 1.00305.45 C ATOM 106 CD GLU 15 7.871 11.674 46.435 1.00305.45 C ATOM 107 OE1 GLU 15 8.063 10.893 47.403 1.00305.45 O ATOM 108 OE2 GLU 15 6.908 12.484 46.360 1.00305.45 O ATOM 109 C GLU 15 11.679 11.648 44.212 1.00305.45 C ATOM 110 O GLU 15 12.731 11.919 44.787 1.00305.45 O ATOM 111 N THR 16 11.135 12.455 43.285 1.00291.66 N ATOM 112 CA THR 16 11.779 13.692 42.972 1.00291.66 C ATOM 113 CB THR 16 12.172 13.821 41.529 1.00291.66 C ATOM 114 OG1 THR 16 11.021 13.770 40.699 1.00291.66 O ATOM 115 CG2 THR 16 13.136 12.676 41.176 1.00291.66 C ATOM 116 C THR 16 10.811 14.787 43.251 1.00291.66 C ATOM 117 O THR 16 9.613 14.654 43.008 1.00291.66 O ATOM 118 N GLY 17 11.319 15.902 43.805 1.00130.36 N ATOM 119 CA GLY 17 10.482 17.034 44.042 1.00130.36 C ATOM 120 C GLY 17 11.340 18.224 43.797 1.00130.36 C ATOM 121 O GLY 17 11.969 18.756 44.711 1.00130.36 O ATOM 122 N GLN 18 11.383 18.676 42.532 1.00268.47 N ATOM 123 CA GLN 18 12.183 19.813 42.205 1.00268.47 C ATOM 124 CB GLN 18 13.428 19.438 41.379 1.00268.47 C ATOM 125 CG GLN 18 14.471 20.551 41.235 1.00268.47 C ATOM 126 CD GLN 18 14.120 21.419 40.037 1.00268.47 C ATOM 127 OE1 GLN 18 13.108 21.209 39.369 1.00268.47 O ATOM 128 NE2 GLN 18 14.995 22.419 39.745 1.00268.47 N ATOM 129 C GLN 18 11.302 20.687 41.382 1.00268.47 C ATOM 130 O GLN 18 10.589 20.207 40.502 1.00268.47 O ATOM 131 N ASN 19 11.309 22.003 41.654 1.00179.64 N ATOM 132 CA ASN 19 10.448 22.844 40.882 1.00179.64 C ATOM 133 CB ASN 19 9.985 24.103 41.633 1.00179.64 C ATOM 134 CG ASN 19 9.059 23.649 42.754 1.00179.64 C ATOM 135 OD1 ASN 19 8.719 22.472 42.856 1.00179.64 O ATOM 136 ND2 ASN 19 8.629 24.608 43.617 1.00179.64 N ATOM 137 C ASN 19 11.221 23.275 39.686 1.00179.64 C ATOM 138 O ASN 19 12.208 24.000 39.793 1.00179.64 O ATOM 139 N TRP 20 10.784 22.817 38.500 1.00318.38 N ATOM 140 CA TRP 20 11.474 23.173 37.300 1.00318.38 C ATOM 141 CB TRP 20 12.106 21.966 36.590 1.00318.38 C ATOM 142 CG TRP 20 12.963 22.325 35.402 1.00318.38 C ATOM 143 CD2 TRP 20 14.363 22.629 35.502 1.00318.38 C ATOM 144 CD1 TRP 20 12.636 22.431 34.081 1.00318.38 C ATOM 145 NE1 TRP 20 13.748 22.779 33.351 1.00318.38 N ATOM 146 CE2 TRP 20 14.818 22.905 34.214 1.00318.38 C ATOM 147 CE3 TRP 20 15.200 22.670 36.580 1.00318.38 C ATOM 148 CZ2 TRP 20 16.125 23.228 33.984 1.00318.38 C ATOM 149 CZ3 TRP 20 16.515 22.999 36.347 1.00318.38 C ATOM 150 CH2 TRP 20 16.969 23.274 35.072 1.00318.38 C ATOM 151 C TRP 20 10.450 23.761 36.390 1.00318.38 C ATOM 152 O TRP 20 9.267 23.440 36.489 1.00318.38 O ATOM 153 N ALA 21 10.870 24.662 35.484 1.00226.36 N ATOM 154 CA ALA 21 9.892 25.260 34.627 1.00226.36 C ATOM 155 CB ALA 21 9.903 26.797 34.664 1.00226.36 C ATOM 156 C ALA 21 10.187 24.858 33.224 1.00226.36 C ATOM 157 O ALA 21 11.340 24.834 32.795 1.00226.36 O ATOM 158 N SER 22 9.125 24.498 32.481 1.00146.16 N ATOM 159 CA SER 22 9.267 24.161 31.100 1.00146.16 C ATOM 160 CB SER 22 8.211 23.160 30.595 1.00146.16 C ATOM 161 OG SER 22 6.910 23.725 30.699 1.00146.16 O ATOM 162 C SER 22 9.083 25.429 30.339 1.00146.16 C ATOM 163 O SER 22 8.555 26.408 30.864 1.00146.16 O ATOM 164 N LEU 23 9.539 25.451 29.075 1.00286.51 N ATOM 165 CA LEU 23 9.351 26.628 28.289 1.00286.51 C ATOM 166 CB LEU 23 10.597 27.052 27.492 1.00286.51 C ATOM 167 CG LEU 23 10.374 28.324 26.650 1.00286.51 C ATOM 168 CD1 LEU 23 10.074 29.541 27.540 1.00286.51 C ATOM 169 CD2 LEU 23 11.537 28.566 25.674 1.00286.51 C ATOM 170 C LEU 23 8.290 26.302 27.297 1.00286.51 C ATOM 171 O LEU 23 8.300 25.232 26.693 1.00286.51 O ATOM 172 N ALA 24 7.324 27.219 27.118 1.00236.37 N ATOM 173 CA ALA 24 6.289 26.951 26.167 1.00236.37 C ATOM 174 CB ALA 24 4.868 27.152 26.721 1.00236.37 C ATOM 175 C ALA 24 6.473 27.919 25.051 1.00236.37 C ATOM 176 O ALA 24 6.773 29.091 25.273 1.00236.37 O ATOM 177 N ALA 25 6.319 27.444 23.804 1.00238.77 N ATOM 178 CA ALA 25 6.467 28.350 22.708 1.00238.77 C ATOM 179 CB ALA 25 6.454 27.658 21.334 1.00238.77 C ATOM 180 C ALA 25 5.295 29.264 22.775 1.00238.77 C ATOM 181 O ALA 25 4.183 28.838 23.084 1.00238.77 O ATOM 182 N ASN 26 5.515 30.563 22.511 1.00224.97 N ATOM 183 CA ASN 26 4.404 31.461 22.561 1.00224.97 C ATOM 184 CB ASN 26 4.563 32.574 23.610 1.00224.97 C ATOM 185 CG ASN 26 3.255 33.347 23.698 1.00224.97 C ATOM 186 OD1 ASN 26 2.335 33.132 22.910 1.00224.97 O ATOM 187 ND2 ASN 26 3.170 34.283 24.682 1.00224.97 N ATOM 188 C ASN 26 4.316 32.127 21.232 1.00224.97 C ATOM 189 O ASN 26 5.286 32.713 20.756 1.00224.97 O ATOM 190 N GLU 27 3.142 32.032 20.582 1.00261.91 N ATOM 191 CA GLU 27 3.006 32.730 19.345 1.00261.91 C ATOM 192 CB GLU 27 1.816 32.274 18.484 1.00261.91 C ATOM 193 CG GLU 27 1.942 30.840 17.965 1.00261.91 C ATOM 194 CD GLU 27 1.438 29.898 19.049 1.00261.91 C ATOM 195 OE1 GLU 27 0.811 30.397 20.020 1.00261.91 O ATOM 196 OE2 GLU 27 1.662 28.666 18.913 1.00261.91 O ATOM 197 C GLU 27 2.764 34.146 19.728 1.00261.91 C ATOM 198 O GLU 27 2.061 34.419 20.700 1.00261.91 O ATOM 199 N LEU 28 3.355 35.097 18.986 1.00303.00 N ATOM 200 CA LEU 28 3.139 36.462 19.347 1.00303.00 C ATOM 201 CB LEU 28 4.139 37.438 18.708 1.00303.00 C ATOM 202 CG LEU 28 3.965 38.891 19.182 1.00303.00 C ATOM 203 CD1 LEU 28 4.245 39.018 20.690 1.00303.00 C ATOM 204 CD2 LEU 28 4.810 39.860 18.341 1.00303.00 C ATOM 205 C LEU 28 1.769 36.810 18.877 1.00303.00 C ATOM 206 O LEU 28 1.302 36.285 17.868 1.00303.00 O ATOM 207 N ARG 29 1.072 37.697 19.612 1.00256.54 N ATOM 208 CA ARG 29 -0.259 38.033 19.207 1.00256.54 C ATOM 209 CB ARG 29 -1.310 37.928 20.323 1.00256.54 C ATOM 210 CG ARG 29 -1.553 36.510 20.837 1.00256.54 C ATOM 211 CD ARG 29 -2.676 36.440 21.873 1.00256.54 C ATOM 212 NE ARG 29 -2.818 35.017 22.289 1.00256.54 N ATOM 213 CZ ARG 29 -2.067 34.531 23.320 1.00256.54 C ATOM 214 NH1 ARG 29 -1.155 35.335 23.942 1.00256.54 N ATOM 215 NH2 ARG 29 -2.241 33.244 23.738 1.00256.54 N ATOM 216 C ARG 29 -0.267 39.458 18.770 1.00256.54 C ATOM 217 O ARG 29 0.487 40.288 19.275 1.00256.54 O ATOM 218 N VAL 30 -1.128 39.759 17.782 1.00132.49 N ATOM 219 CA VAL 30 -1.302 41.093 17.297 1.00132.49 C ATOM 220 CB VAL 30 -0.708 41.325 15.940 1.00132.49 C ATOM 221 CG1 VAL 30 0.821 41.200 16.050 1.00132.49 C ATOM 222 CG2 VAL 30 -1.334 40.321 14.958 1.00132.49 C ATOM 223 C VAL 30 -2.776 41.289 17.193 1.00132.49 C ATOM 224 O VAL 30 -3.538 40.325 17.225 1.00132.49 O ATOM 225 N THR 31 -3.225 42.551 17.088 1.00261.39 N ATOM 226 CA THR 31 -4.637 42.768 17.022 1.00261.39 C ATOM 227 CB THR 31 -5.118 43.900 17.879 1.00261.39 C ATOM 228 OG1 THR 31 -6.535 43.968 17.853 1.00261.39 O ATOM 229 CG2 THR 31 -4.509 45.208 17.347 1.00261.39 C ATOM 230 C THR 31 -4.989 43.117 15.619 1.00261.39 C ATOM 231 O THR 31 -4.236 43.792 14.921 1.00261.39 O ATOM 232 N GLU 32 -6.153 42.620 15.163 1.00217.51 N ATOM 233 CA GLU 32 -6.617 42.940 13.849 1.00217.51 C ATOM 234 CB GLU 32 -6.903 41.708 12.975 1.00217.51 C ATOM 235 CG GLU 32 -5.647 40.958 12.529 1.00217.51 C ATOM 236 CD GLU 32 -6.099 39.754 11.717 1.00217.51 C ATOM 237 OE1 GLU 32 -7.333 39.502 11.676 1.00217.51 O ATOM 238 OE2 GLU 32 -5.219 39.068 11.132 1.00217.51 O ATOM 239 C GLU 32 -7.914 43.649 14.029 1.00217.51 C ATOM 240 O GLU 32 -8.798 43.178 14.743 1.00217.51 O ATOM 241 N ARG 33 -8.054 44.828 13.399 1.00257.48 N ATOM 242 CA ARG 33 -9.290 45.534 13.514 1.00257.48 C ATOM 243 CB ARG 33 -9.132 46.896 14.211 1.00257.48 C ATOM 244 CG ARG 33 -10.435 47.682 14.367 1.00257.48 C ATOM 245 CD ARG 33 -10.249 49.035 15.061 1.00257.48 C ATOM 246 NE ARG 33 -9.736 48.765 16.434 1.00257.48 N ATOM 247 CZ ARG 33 -9.710 49.760 17.369 1.00257.48 C ATOM 248 NH1 ARG 33 -10.186 51.001 17.060 1.00257.48 N ATOM 249 NH2 ARG 33 -9.216 49.511 18.617 1.00257.48 N ATOM 250 C ARG 33 -9.754 45.783 12.119 1.00257.48 C ATOM 251 O ARG 33 -9.009 46.312 11.296 1.00257.48 O ATOM 252 N PRO 34 -10.957 45.386 11.814 1.00172.68 N ATOM 253 CA PRO 34 -11.437 45.634 10.486 1.00172.68 C ATOM 254 CD PRO 34 -11.496 44.154 12.367 1.00172.68 C ATOM 255 CB PRO 34 -12.636 44.711 10.291 1.00172.68 C ATOM 256 CG PRO 34 -12.343 43.535 11.241 1.00172.68 C ATOM 257 C PRO 34 -11.770 47.078 10.365 1.00172.68 C ATOM 258 O PRO 34 -12.219 47.663 11.349 1.00172.68 O ATOM 259 N PHE 35 -11.545 47.688 9.188 1.00213.75 N ATOM 260 CA PHE 35 -11.922 49.062 9.096 1.00213.75 C ATOM 261 CB PHE 35 -10.728 49.998 9.348 1.00213.75 C ATOM 262 CG PHE 35 -11.243 51.351 9.693 1.00213.75 C ATOM 263 CD1 PHE 35 -11.711 51.596 10.963 1.00213.75 C ATOM 264 CD2 PHE 35 -11.237 52.371 8.772 1.00213.75 C ATOM 265 CE1 PHE 35 -12.187 52.838 11.308 1.00213.75 C ATOM 266 CE2 PHE 35 -11.711 53.616 9.112 1.00213.75 C ATOM 267 CZ PHE 35 -12.184 53.850 10.380 1.00213.75 C ATOM 268 C PHE 35 -12.400 49.268 7.696 1.00213.75 C ATOM 269 O PHE 35 -11.615 49.206 6.751 1.00213.75 O ATOM 270 N TRP 36 -13.712 49.511 7.522 1.00237.35 N ATOM 271 CA TRP 36 -14.212 49.741 6.199 1.00237.35 C ATOM 272 CB TRP 36 -14.964 48.540 5.590 1.00237.35 C ATOM 273 CG TRP 36 -15.743 48.861 4.332 1.00237.35 C ATOM 274 CD2 TRP 36 -17.144 48.589 4.179 1.00237.35 C ATOM 275 CD1 TRP 36 -15.323 49.400 3.151 1.00237.35 C ATOM 276 NE1 TRP 36 -16.383 49.499 2.278 1.00237.35 N ATOM 277 CE2 TRP 36 -17.509 48.996 2.897 1.00237.35 C ATOM 278 CE3 TRP 36 -18.055 48.042 5.039 1.00237.35 C ATOM 279 CZ2 TRP 36 -18.795 48.864 2.453 1.00237.35 C ATOM 280 CZ3 TRP 36 -19.348 47.908 4.588 1.00237.35 C ATOM 281 CH2 TRP 36 -19.712 48.312 3.319 1.00237.35 C ATOM 282 C TRP 36 -15.164 50.883 6.237 1.00237.35 C ATOM 283 O TRP 36 -16.200 50.822 6.895 1.00237.35 O ATOM 284 N ILE 37 -14.817 51.972 5.526 1.00147.25 N ATOM 285 CA ILE 37 -15.712 53.079 5.417 1.00147.25 C ATOM 286 CB ILE 37 -15.267 54.292 6.188 1.00147.25 C ATOM 287 CG1 ILE 37 -16.324 55.403 6.090 1.00147.25 C ATOM 288 CG2 ILE 37 -13.868 54.701 5.700 1.00147.25 C ATOM 289 CD1 ILE 37 -17.643 55.046 6.773 1.00147.25 C ATOM 290 C ILE 37 -15.778 53.430 3.968 1.00147.25 C ATOM 291 O ILE 37 -14.756 53.659 3.324 1.00147.25 O ATOM 292 N SER 38 -16.997 53.457 3.401 1.00110.85 N ATOM 293 CA SER 38 -17.090 53.819 2.021 1.00110.85 C ATOM 294 CB SER 38 -17.254 52.617 1.076 1.00110.85 C ATOM 295 OG SER 38 -18.491 51.965 1.322 1.00110.85 O ATOM 296 C SER 38 -18.298 54.676 1.869 1.00110.85 C ATOM 297 O SER 38 -19.348 54.401 2.446 1.00110.85 O ATOM 298 N SER 39 -18.163 55.763 1.087 1.00218.01 N ATOM 299 CA SER 39 -19.273 56.633 0.847 1.00218.01 C ATOM 300 CB SER 39 -19.570 57.597 2.009 1.00218.01 C ATOM 301 OG SER 39 -19.986 56.867 3.152 1.00218.01 O ATOM 302 C SER 39 -18.910 57.473 -0.330 1.00218.01 C ATOM 303 O SER 39 -17.742 57.560 -0.707 1.00218.01 O ATOM 304 N PHE 40 -19.918 58.110 -0.957 1.00222.85 N ATOM 305 CA PHE 40 -19.621 58.961 -2.067 1.00222.85 C ATOM 306 CB PHE 40 -20.480 58.673 -3.308 1.00222.85 C ATOM 307 CG PHE 40 -20.050 59.627 -4.363 1.00222.85 C ATOM 308 CD1 PHE 40 -18.898 59.401 -5.080 1.00222.85 C ATOM 309 CD2 PHE 40 -20.807 60.742 -4.639 1.00222.85 C ATOM 310 CE1 PHE 40 -18.502 60.280 -6.058 1.00222.85 C ATOM 311 CE2 PHE 40 -20.415 61.625 -5.616 1.00222.85 C ATOM 312 CZ PHE 40 -19.261 61.394 -6.325 1.00222.85 C ATOM 313 C PHE 40 -19.922 60.352 -1.615 1.00222.85 C ATOM 314 O PHE 40 -21.008 60.633 -1.111 1.00222.85 O ATOM 315 N ILE 41 -18.946 61.267 -1.766 1.00110.69 N ATOM 316 CA ILE 41 -19.175 62.599 -1.299 1.00110.69 C ATOM 317 CB ILE 41 -18.511 62.873 0.016 1.00110.69 C ATOM 318 CG1 ILE 41 -16.986 62.727 -0.116 1.00110.69 C ATOM 319 CG2 ILE 41 -19.139 61.947 1.072 1.00110.69 C ATOM 320 CD1 ILE 41 -16.218 63.180 1.126 1.00110.69 C ATOM 321 C ILE 41 -18.623 63.568 -2.289 1.00110.69 C ATOM 322 O ILE 41 -17.712 63.254 -3.054 1.00110.69 O ATOM 323 N GLY 42 -19.196 64.786 -2.300 1.00 71.65 N ATOM 324 CA GLY 42 -18.719 65.841 -3.142 1.00 71.65 C ATOM 325 C GLY 42 -19.637 65.971 -4.308 1.00 71.65 C ATOM 326 O GLY 42 -19.789 65.050 -5.108 1.00 71.65 O ATOM 327 N ARG 43 -20.284 67.146 -4.419 1.00225.21 N ATOM 328 CA ARG 43 -21.140 67.419 -5.532 1.00225.21 C ATOM 329 CB ARG 43 -22.453 66.616 -5.493 1.00225.21 C ATOM 330 CG ARG 43 -23.405 66.880 -6.665 1.00225.21 C ATOM 331 CD ARG 43 -24.534 65.849 -6.763 1.00225.21 C ATOM 332 NE ARG 43 -25.530 66.330 -7.762 1.00225.21 N ATOM 333 CZ ARG 43 -26.667 66.954 -7.335 1.00225.21 C ATOM 334 NH1 ARG 43 -26.896 67.111 -5.999 1.00225.21 N ATOM 335 NH2 ARG 43 -27.580 67.416 -8.238 1.00225.21 N ATOM 336 C ARG 43 -21.474 68.871 -5.460 1.00225.21 C ATOM 337 O ARG 43 -21.898 69.366 -4.418 1.00225.21 O ATOM 338 N SER 44 -21.275 69.606 -6.568 1.00137.81 N ATOM 339 CA SER 44 -21.624 70.993 -6.541 1.00137.81 C ATOM 340 CB SER 44 -20.489 71.915 -6.066 1.00137.81 C ATOM 341 OG SER 44 -19.413 71.880 -6.991 1.00137.81 O ATOM 342 C SER 44 -21.963 71.387 -7.936 1.00137.81 C ATOM 343 O SER 44 -21.345 70.923 -8.892 1.00137.81 O ATOM 344 N LYS 45 -22.980 72.252 -8.087 1.00237.67 N ATOM 345 CA LYS 45 -23.325 72.685 -9.403 1.00237.67 C ATOM 346 CB LYS 45 -24.641 72.079 -9.923 1.00237.67 C ATOM 347 CG LYS 45 -24.944 72.448 -11.377 1.00237.67 C ATOM 348 CD LYS 45 -26.035 71.590 -12.021 1.00237.67 C ATOM 349 CE LYS 45 -27.456 72.061 -11.703 1.00237.67 C ATOM 350 NZ LYS 45 -28.441 71.221 -12.422 1.00237.67 N ATOM 351 C LYS 45 -23.511 74.162 -9.334 1.00237.67 C ATOM 352 O LYS 45 -24.208 74.668 -8.456 1.00237.67 O TER END