####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS116_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 22 18 - 39 4.85 11.15 LCS_AVERAGE: 43.44 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 19 - 28 1.88 16.48 LCS_AVERAGE: 17.20 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 0.43 18.52 LCS_AVERAGE: 13.17 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 17 3 3 3 4 4 4 8 10 14 15 18 23 25 28 31 33 36 37 38 39 LCS_GDT V 3 V 3 3 4 17 3 3 4 4 5 7 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT Q 4 Q 4 4 6 17 3 3 4 6 6 7 9 11 14 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT G 5 G 5 4 6 17 2 3 5 6 7 10 12 15 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT P 6 P 6 4 6 17 2 3 5 6 7 10 12 15 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT W 7 W 7 4 6 17 3 4 5 6 7 9 12 15 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT V 8 V 8 4 9 17 3 4 4 6 7 9 12 15 15 16 18 20 21 26 31 33 36 37 38 39 LCS_GDT G 9 G 9 8 9 17 6 7 8 8 8 9 12 15 15 16 18 20 23 27 31 33 36 37 38 39 LCS_GDT S 10 S 10 8 9 17 6 7 8 8 8 9 10 15 15 16 19 23 25 28 31 33 36 37 38 39 LCS_GDT S 11 S 11 8 9 17 6 7 8 8 8 9 12 15 15 16 18 21 25 28 31 33 36 37 38 39 LCS_GDT Y 12 Y 12 8 9 17 6 7 8 8 8 9 12 15 15 16 18 19 20 23 27 32 36 37 38 39 LCS_GDT V 13 V 13 8 9 17 4 7 8 8 8 9 11 15 15 16 19 22 25 28 31 33 36 37 38 39 LCS_GDT A 14 A 14 8 9 17 6 7 8 8 8 9 12 15 15 16 18 21 25 28 31 33 36 37 38 39 LCS_GDT E 15 E 15 8 9 17 6 7 8 8 8 9 12 15 15 16 17 19 20 22 25 28 32 35 36 39 LCS_GDT T 16 T 16 8 9 17 3 4 8 8 8 9 10 11 14 16 18 19 20 22 25 30 36 37 38 39 LCS_GDT G 17 G 17 5 9 17 3 5 5 5 6 9 10 11 14 16 18 21 25 28 31 33 36 37 38 39 LCS_GDT Q 18 Q 18 5 6 22 4 5 5 5 6 7 9 11 13 15 19 23 25 28 31 33 36 37 38 39 LCS_GDT N 19 N 19 5 10 22 4 5 5 5 7 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT W 20 W 20 9 10 22 8 9 9 9 9 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT A 21 A 21 9 10 22 8 9 9 9 9 9 10 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT S 22 S 22 9 10 22 8 9 9 9 9 9 11 12 14 17 19 24 24 28 29 33 36 37 38 39 LCS_GDT L 23 L 23 9 10 22 8 9 9 9 9 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT A 24 A 24 9 10 22 8 9 9 9 9 9 10 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT A 25 A 25 9 10 22 8 9 9 9 9 9 10 12 14 17 18 19 22 26 28 32 36 36 38 39 LCS_GDT N 26 N 26 9 10 22 8 9 9 9 9 9 11 12 14 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT E 27 E 27 9 10 22 8 9 9 9 9 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT L 28 L 28 9 10 22 5 9 9 9 9 9 11 12 14 17 18 20 24 26 27 30 32 35 36 38 LCS_GDT R 29 R 29 3 6 22 3 3 5 5 7 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT V 30 V 30 3 6 22 3 3 4 5 7 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT T 31 T 31 4 6 22 3 4 5 5 7 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT E 32 E 32 4 6 22 3 4 4 6 8 8 11 12 13 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT R 33 R 33 4 6 22 3 4 4 6 7 9 11 12 14 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT P 34 P 34 4 6 22 3 4 5 6 7 9 11 12 14 17 18 24 25 28 31 33 36 37 38 39 LCS_GDT F 35 F 35 4 5 22 3 3 4 6 6 9 11 12 14 17 18 24 25 28 31 33 36 37 38 39 LCS_GDT W 36 W 36 4 5 22 3 3 4 6 6 7 9 13 14 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT I 37 I 37 3 5 22 3 3 3 5 6 7 8 11 14 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT S 38 S 38 3 6 22 3 3 4 5 6 10 11 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT S 39 S 39 5 7 22 3 3 5 7 8 8 10 13 15 17 19 24 25 28 31 33 36 37 38 39 LCS_GDT F 40 F 40 5 7 15 3 3 5 7 8 8 8 10 10 11 17 19 20 23 27 31 36 37 38 39 LCS_GDT I 41 I 41 5 7 14 3 3 5 7 8 8 8 10 10 11 11 13 18 24 28 31 36 37 38 39 LCS_GDT G 42 G 42 5 7 14 3 4 5 7 8 9 12 15 15 16 17 17 18 21 25 28 33 35 36 39 LCS_GDT R 43 R 43 5 7 14 3 4 5 7 8 9 12 15 15 16 17 17 18 20 23 23 24 27 32 35 LCS_GDT S 44 S 44 4 7 14 3 4 4 7 8 8 11 15 15 16 17 17 18 20 23 23 24 26 28 32 LCS_GDT K 45 K 45 4 7 14 3 4 4 7 8 9 12 15 15 16 17 17 18 20 23 23 24 24 25 26 LCS_AVERAGE LCS_A: 24.60 ( 13.17 17.20 43.44 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 9 9 9 10 12 15 15 17 19 24 25 28 31 33 36 37 38 39 GDT PERCENT_AT 18.18 20.45 20.45 20.45 20.45 22.73 27.27 34.09 34.09 38.64 43.18 54.55 56.82 63.64 70.45 75.00 81.82 84.09 86.36 88.64 GDT RMS_LOCAL 0.33 0.43 0.43 0.43 0.43 2.41 2.66 2.91 2.91 3.67 3.76 4.44 4.72 5.01 5.47 5.67 6.05 6.28 6.37 6.56 GDT RMS_ALL_AT 18.84 18.52 18.52 18.52 18.52 9.82 18.84 18.67 18.67 14.33 9.56 9.68 8.93 8.86 8.51 8.45 8.38 8.17 8.18 8.14 # Checking swapping # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 9.440 0 0.594 0.590 10.785 0.000 0.000 - LGA V 3 V 3 9.890 0 0.623 1.365 13.393 0.000 0.000 11.180 LGA Q 4 Q 4 5.785 0 0.640 1.063 11.111 12.273 5.455 8.857 LGA G 5 G 5 3.601 0 0.591 0.591 3.996 15.000 15.000 - LGA P 6 P 6 2.112 0 0.018 0.434 3.894 48.182 34.286 3.894 LGA W 7 W 7 1.392 0 0.430 0.318 2.835 59.091 50.130 2.633 LGA V 8 V 8 2.635 0 0.671 0.670 4.365 31.818 22.338 4.014 LGA G 9 G 9 1.229 0 0.409 0.409 1.642 65.909 65.909 - LGA S 10 S 10 3.997 0 0.080 0.166 7.118 23.636 15.758 7.118 LGA S 11 S 11 3.778 0 0.044 0.594 6.703 20.909 13.939 6.703 LGA Y 12 Y 12 3.456 0 0.082 1.031 8.998 20.909 7.121 8.998 LGA V 13 V 13 3.324 0 0.039 1.086 6.374 23.636 14.286 5.739 LGA A 14 A 14 1.467 0 0.041 0.042 2.408 61.818 57.091 - LGA E 15 E 15 3.895 0 0.090 0.933 9.951 12.727 5.657 9.951 LGA T 16 T 16 7.750 0 0.663 1.361 11.045 0.000 0.000 10.698 LGA G 17 G 17 8.608 0 0.697 0.697 10.982 0.000 0.000 - LGA Q 18 Q 18 14.902 0 0.270 0.515 17.415 0.000 0.000 16.587 LGA N 19 N 19 19.171 0 0.135 1.379 22.490 0.000 0.000 19.816 LGA W 20 W 20 22.904 0 0.603 0.527 24.494 0.000 0.000 23.830 LGA A 21 A 21 25.945 0 0.034 0.045 28.053 0.000 0.000 - LGA S 22 S 22 30.499 0 0.039 0.581 31.622 0.000 0.000 30.871 LGA L 23 L 23 28.055 0 0.041 1.057 30.899 0.000 0.000 29.304 LGA A 24 A 24 25.565 0 0.037 0.044 27.439 0.000 0.000 - LGA A 25 A 25 30.678 0 0.024 0.033 32.405 0.000 0.000 - LGA N 26 N 26 33.116 0 0.025 1.112 36.303 0.000 0.000 34.688 LGA E 27 E 27 29.324 0 0.098 0.818 30.164 0.000 0.000 27.398 LGA L 28 L 28 29.675 0 0.229 1.434 30.950 0.000 0.000 30.919 LGA R 29 R 29 30.544 0 0.677 1.621 30.665 0.000 0.000 27.546 LGA V 30 V 30 29.775 0 0.203 1.190 30.720 0.000 0.000 30.720 LGA T 31 T 31 31.237 0 0.698 1.447 31.686 0.000 0.000 30.649 LGA E 32 E 32 30.279 0 0.110 1.353 30.573 0.000 0.000 28.348 LGA R 33 R 33 30.095 0 0.209 1.315 30.915 0.000 0.000 29.098 LGA P 34 P 34 26.891 0 0.169 0.546 30.368 0.000 0.000 28.992 LGA F 35 F 35 22.536 0 0.530 0.978 23.952 0.000 0.000 21.239 LGA W 36 W 36 17.475 0 0.067 0.240 22.413 0.000 0.000 20.297 LGA I 37 I 37 13.154 0 0.602 0.556 14.426 0.000 0.000 12.167 LGA S 38 S 38 13.673 0 0.617 0.842 16.841 0.000 0.000 16.841 LGA S 39 S 39 14.720 0 0.569 0.502 18.521 0.000 0.000 18.521 LGA F 40 F 40 10.662 0 0.449 1.695 14.142 0.000 0.000 13.848 LGA I 41 I 41 8.135 0 0.555 0.966 11.663 0.000 0.000 11.663 LGA G 42 G 42 2.311 0 0.729 0.729 4.202 33.182 33.182 - LGA R 43 R 43 1.821 0 0.020 1.368 3.893 45.000 39.504 3.893 LGA S 44 S 44 3.400 0 0.207 0.770 5.690 16.364 10.909 5.690 LGA K 45 K 45 2.965 0 0.601 0.812 8.455 15.455 8.081 8.455 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.956 7.933 9.577 11.498 9.060 1.558 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.91 37.500 30.397 0.498 LGA_LOCAL RMSD: 2.914 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.665 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.956 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.212313 * X + -0.905888 * Y + -0.366457 * Z + 50.664333 Y_new = 0.186231 * X + 0.330624 * Y + -0.925206 * Z + 17.546637 Z_new = 0.959292 * X + -0.264679 * Y + 0.098509 * Z + -10.537573 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.421543 -1.284485 -1.214497 [DEG: 138.7442 -73.5955 -69.5856 ] ZXZ: -0.377124 1.472127 1.840009 [DEG: -21.6076 84.3467 105.4247 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS116_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.91 30.397 7.96 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS116_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT 3ml3A 3vmvA 3jurD1 1ia5A2 2iq7A2 ATOM 9 N ALA 2 15.008 32.556 6.248 1.00131.75 N ATOM 10 CA ALA 2 15.244 33.812 5.600 1.00131.75 C ATOM 11 CB ALA 2 16.637 33.882 4.956 1.00131.75 C ATOM 12 C ALA 2 14.265 34.047 4.493 1.00131.75 C ATOM 13 O ALA 2 13.724 35.143 4.370 1.00131.75 O ATOM 14 N VAL 3 14.010 33.028 3.653 1.00198.67 N ATOM 15 CA VAL 3 13.167 33.213 2.506 1.00198.67 C ATOM 16 CB VAL 3 13.263 32.073 1.533 1.00198.67 C ATOM 17 CG1 VAL 3 12.724 30.804 2.210 1.00198.67 C ATOM 18 CG2 VAL 3 12.519 32.458 0.243 1.00198.67 C ATOM 19 C VAL 3 11.734 33.351 2.910 1.00198.67 C ATOM 20 O VAL 3 10.969 34.077 2.279 1.00198.67 O ATOM 21 N GLN 4 11.339 32.660 3.992 1.00157.52 N ATOM 22 CA GLN 4 9.964 32.624 4.401 1.00157.52 C ATOM 23 CB GLN 4 9.717 31.618 5.535 1.00157.52 C ATOM 24 CG GLN 4 9.990 30.177 5.106 1.00157.52 C ATOM 25 CD GLN 4 9.077 29.888 3.923 1.00157.52 C ATOM 26 OE1 GLN 4 7.878 30.160 3.968 1.00157.52 O ATOM 27 NE2 GLN 4 9.662 29.338 2.826 1.00157.52 N ATOM 28 C GLN 4 9.506 33.966 4.877 1.00157.52 C ATOM 29 O GLN 4 8.355 34.342 4.651 1.00157.52 O ATOM 30 N GLY 5 10.395 34.735 5.528 1.00 93.77 N ATOM 31 CA GLY 5 9.978 35.972 6.108 1.00 93.77 C ATOM 32 C GLY 5 9.457 36.917 5.071 1.00 93.77 C ATOM 33 O GLY 5 8.443 37.583 5.287 1.00 93.77 O ATOM 34 N PRO 6 10.107 36.990 3.950 1.00225.91 N ATOM 35 CA PRO 6 9.637 37.874 2.924 1.00225.91 C ATOM 36 CD PRO 6 11.550 36.891 3.951 1.00225.91 C ATOM 37 CB PRO 6 10.797 38.011 1.935 1.00225.91 C ATOM 38 CG PRO 6 12.040 37.805 2.816 1.00225.91 C ATOM 39 C PRO 6 8.348 37.471 2.312 1.00225.91 C ATOM 40 O PRO 6 7.737 38.286 1.626 1.00225.91 O ATOM 41 N TRP 7 7.909 36.220 2.510 1.00208.24 N ATOM 42 CA TRP 7 6.704 35.796 1.855 1.00208.24 C ATOM 43 CB TRP 7 6.782 34.389 1.243 1.00208.24 C ATOM 44 CG TRP 7 7.614 34.354 -0.013 1.00208.24 C ATOM 45 CD2 TRP 7 7.084 34.663 -1.310 1.00208.24 C ATOM 46 CD1 TRP 7 8.936 34.067 -0.192 1.00208.24 C ATOM 47 NE1 TRP 7 9.262 34.179 -1.524 1.00208.24 N ATOM 48 CE2 TRP 7 8.130 34.546 -2.223 1.00208.24 C ATOM 49 CE3 TRP 7 5.825 35.019 -1.705 1.00208.24 C ATOM 50 CZ2 TRP 7 7.933 34.784 -3.553 1.00208.24 C ATOM 51 CZ3 TRP 7 5.629 35.255 -3.047 1.00208.24 C ATOM 52 CH2 TRP 7 6.663 35.140 -3.953 1.00208.24 C ATOM 53 C TRP 7 5.565 35.825 2.813 1.00208.24 C ATOM 54 O TRP 7 5.741 35.756 4.028 1.00208.24 O ATOM 55 N VAL 8 4.348 35.959 2.253 1.00 78.24 N ATOM 56 CA VAL 8 3.159 36.021 3.043 1.00 78.24 C ATOM 57 CB VAL 8 1.937 36.403 2.261 1.00 78.24 C ATOM 58 CG1 VAL 8 0.718 36.324 3.196 1.00 78.24 C ATOM 59 CG2 VAL 8 2.163 37.794 1.643 1.00 78.24 C ATOM 60 C VAL 8 2.942 34.648 3.576 1.00 78.24 C ATOM 61 O VAL 8 3.180 33.655 2.889 1.00 78.24 O ATOM 62 N GLY 9 2.500 34.558 4.844 1.00 75.21 N ATOM 63 CA GLY 9 2.314 33.266 5.427 1.00 75.21 C ATOM 64 C GLY 9 3.645 32.820 5.941 1.00 75.21 C ATOM 65 O GLY 9 3.907 31.625 6.073 1.00 75.21 O ATOM 66 N SER 10 4.524 33.794 6.243 1.00122.93 N ATOM 67 CA SER 10 5.855 33.518 6.701 1.00122.93 C ATOM 68 CB SER 10 6.686 34.795 6.919 1.00122.93 C ATOM 69 OG SER 10 6.139 35.553 7.988 1.00122.93 O ATOM 70 C SER 10 5.806 32.797 8.020 1.00122.93 C ATOM 71 O SER 10 6.578 31.872 8.261 1.00122.93 O ATOM 72 N SER 11 4.882 33.209 8.906 1.00175.61 N ATOM 73 CA SER 11 4.787 32.716 10.254 1.00175.61 C ATOM 74 CB SER 11 3.739 33.490 11.065 1.00175.61 C ATOM 75 OG SER 11 2.437 33.189 10.585 1.00175.61 O ATOM 76 C SER 11 4.410 31.272 10.330 1.00175.61 C ATOM 77 O SER 11 4.888 30.533 11.196 1.00175.61 O ATOM 78 N TYR 12 3.541 30.836 9.410 1.00181.38 N ATOM 79 CA TYR 12 3.011 29.512 9.475 1.00181.38 C ATOM 80 CB TYR 12 1.999 29.258 8.347 1.00181.38 C ATOM 81 CG TYR 12 1.779 27.792 8.266 1.00181.38 C ATOM 82 CD1 TYR 12 0.973 27.139 9.169 1.00181.38 C ATOM 83 CD2 TYR 12 2.386 27.074 7.264 1.00181.38 C ATOM 84 CE1 TYR 12 0.785 25.780 9.072 1.00181.38 C ATOM 85 CE2 TYR 12 2.201 25.717 7.162 1.00181.38 C ATOM 86 CZ TYR 12 1.400 25.070 8.068 1.00181.38 C ATOM 87 OH TYR 12 1.208 23.676 7.967 1.00181.38 O ATOM 88 C TYR 12 4.109 28.509 9.356 1.00181.38 C ATOM 89 O TYR 12 4.180 27.544 10.123 1.00181.38 O ATOM 90 N VAL 13 5.017 28.741 8.398 1.00218.87 N ATOM 91 CA VAL 13 6.053 27.800 8.120 1.00218.87 C ATOM 92 CB VAL 13 6.897 28.184 6.937 1.00218.87 C ATOM 93 CG1 VAL 13 7.571 29.536 7.217 1.00218.87 C ATOM 94 CG2 VAL 13 7.899 27.045 6.673 1.00218.87 C ATOM 95 C VAL 13 6.963 27.621 9.279 1.00218.87 C ATOM 96 O VAL 13 7.375 26.509 9.613 1.00218.87 O ATOM 97 N ALA 14 7.286 28.747 9.914 1.00151.07 N ATOM 98 CA ALA 14 8.191 28.835 11.007 1.00151.07 C ATOM 99 CB ALA 14 8.458 30.291 11.397 1.00151.07 C ATOM 100 C ALA 14 7.647 28.048 12.157 1.00151.07 C ATOM 101 O ALA 14 8.406 27.440 12.905 1.00151.07 O ATOM 102 N GLU 15 6.310 27.993 12.301 1.00152.51 N ATOM 103 CA GLU 15 5.691 27.302 13.405 1.00152.51 C ATOM 104 CB GLU 15 4.152 27.278 13.314 1.00152.51 C ATOM 105 CG GLU 15 3.468 26.763 14.583 1.00152.51 C ATOM 106 CD GLU 15 1.961 26.911 14.408 1.00152.51 C ATOM 107 OE1 GLU 15 1.530 27.284 13.284 1.00152.51 O ATOM 108 OE2 GLU 15 1.222 26.655 15.396 1.00152.51 O ATOM 109 C GLU 15 6.192 25.892 13.370 1.00152.51 C ATOM 110 O GLU 15 6.168 25.216 14.382 1.00152.51 O ATOM 111 N THR 16 6.610 25.349 12.218 1.00171.02 N ATOM 112 CA THR 16 7.079 23.985 12.225 1.00171.02 C ATOM 113 CB THR 16 7.512 23.530 10.858 1.00171.02 C ATOM 114 OG1 THR 16 7.630 22.116 10.803 1.00171.02 O ATOM 115 CG2 THR 16 8.861 24.194 10.533 1.00171.02 C ATOM 116 C THR 16 8.219 23.774 13.186 1.00171.02 C ATOM 117 O THR 16 8.606 24.665 13.940 1.00171.02 O ATOM 118 N GLY 17 8.771 22.539 13.162 1.00 77.59 N ATOM 119 CA GLY 17 9.771 22.043 14.069 1.00 77.59 C ATOM 120 C GLY 17 11.069 22.772 13.884 1.00 77.59 C ATOM 121 O GLY 17 11.234 23.540 12.937 1.00 77.59 O ATOM 122 N GLN 18 12.038 22.529 14.803 1.00243.63 N ATOM 123 CA GLN 18 13.243 23.313 14.787 1.00243.63 C ATOM 124 CB GLN 18 13.532 23.982 16.146 1.00243.63 C ATOM 125 CG GLN 18 12.447 24.958 16.602 1.00243.63 C ATOM 126 CD GLN 18 12.487 26.170 15.685 1.00243.63 C ATOM 127 OE1 GLN 18 13.364 27.025 15.801 1.00243.63 O ATOM 128 NE2 GLN 18 11.509 26.248 14.744 1.00243.63 N ATOM 129 C GLN 18 14.495 22.538 14.452 1.00243.63 C ATOM 130 O GLN 18 15.236 22.115 15.336 1.00243.63 O ATOM 131 N ASN 19 14.749 22.369 13.143 1.00204.69 N ATOM 132 CA ASN 19 15.917 21.854 12.469 1.00204.69 C ATOM 133 CB ASN 19 15.647 21.523 10.988 1.00204.69 C ATOM 134 CG ASN 19 16.914 20.944 10.368 1.00204.69 C ATOM 135 OD1 ASN 19 17.385 19.878 10.761 1.00204.69 O ATOM 136 ND2 ASN 19 17.483 21.670 9.368 1.00204.69 N ATOM 137 C ASN 19 16.954 22.901 12.514 1.00204.69 C ATOM 138 O ASN 19 18.099 22.665 12.140 1.00204.69 O ATOM 139 N TRP 20 16.509 24.117 12.869 1.00125.84 N ATOM 140 CA TRP 20 17.250 25.334 12.795 1.00125.84 C ATOM 141 CB TRP 20 16.458 26.503 13.409 1.00125.84 C ATOM 142 CG TRP 20 15.160 26.811 12.697 1.00125.84 C ATOM 143 CD2 TRP 20 14.901 28.000 11.933 1.00125.84 C ATOM 144 CD1 TRP 20 14.012 26.074 12.662 1.00125.84 C ATOM 145 NE1 TRP 20 13.058 26.723 11.916 1.00125.84 N ATOM 146 CE2 TRP 20 13.590 27.911 11.463 1.00125.84 C ATOM 147 CE3 TRP 20 15.688 29.079 11.648 1.00125.84 C ATOM 148 CZ2 TRP 20 13.045 28.904 10.699 1.00125.84 C ATOM 149 CZ3 TRP 20 15.136 30.076 10.875 1.00125.84 C ATOM 150 CH2 TRP 20 13.840 29.990 10.407 1.00125.84 C ATOM 151 C TRP 20 18.530 25.217 13.564 1.00125.84 C ATOM 152 O TRP 20 19.580 25.657 13.096 1.00125.84 O ATOM 153 N ALA 21 18.487 24.643 14.773 1.00177.75 N ATOM 154 CA ALA 21 19.674 24.554 15.572 1.00177.75 C ATOM 155 CB ALA 21 19.399 23.976 16.928 1.00177.75 C ATOM 156 C ALA 21 20.731 23.703 14.939 1.00177.75 C ATOM 157 O ALA 21 21.929 24.011 14.978 1.00177.75 O ATOM 158 N SER 22 20.285 22.582 14.354 1.00190.96 N ATOM 159 CA SER 22 21.184 21.639 13.775 1.00190.96 C ATOM 160 CB SER 22 20.445 20.429 13.180 1.00190.96 C ATOM 161 OG SER 22 19.634 19.813 14.169 1.00190.96 O ATOM 162 C SER 22 21.878 22.302 12.645 1.00190.96 C ATOM 163 O SER 22 23.067 22.096 12.400 1.00190.96 O ATOM 164 N LEU 23 21.116 23.119 11.912 1.00243.68 N ATOM 165 CA LEU 23 21.654 23.766 10.763 1.00243.68 C ATOM 166 CB LEU 23 20.568 24.508 9.953 1.00243.68 C ATOM 167 CG LEU 23 21.037 25.153 8.628 1.00243.68 C ATOM 168 CD1 LEU 23 21.918 26.396 8.842 1.00243.68 C ATOM 169 CD2 LEU 23 21.695 24.106 7.714 1.00243.68 C ATOM 170 C LEU 23 22.705 24.738 11.136 1.00243.68 C ATOM 171 O LEU 23 23.670 24.901 10.394 1.00243.68 O ATOM 172 N ALA 24 22.506 25.454 12.255 1.00156.77 N ATOM 173 CA ALA 24 23.471 26.432 12.659 1.00156.77 C ATOM 174 CB ALA 24 23.058 27.179 13.938 1.00156.77 C ATOM 175 C ALA 24 24.754 25.742 12.948 1.00156.77 C ATOM 176 O ALA 24 25.829 26.252 12.632 1.00156.77 O ATOM 177 N ALA 25 24.662 24.562 13.585 1.00155.32 N ATOM 178 CA ALA 25 25.851 23.851 13.958 1.00155.32 C ATOM 179 CB ALA 25 25.516 22.555 14.690 1.00155.32 C ATOM 180 C ALA 25 26.623 23.466 12.731 1.00155.32 C ATOM 181 O ALA 25 27.849 23.606 12.682 1.00155.32 O ATOM 182 N ASN 26 25.907 22.979 11.697 1.00 74.07 N ATOM 183 CA ASN 26 26.574 22.522 10.510 1.00 74.07 C ATOM 184 CB ASN 26 25.618 21.947 9.447 1.00 74.07 C ATOM 185 CG ASN 26 25.125 20.578 9.894 1.00 74.07 C ATOM 186 OD1 ASN 26 24.005 20.179 9.579 1.00 74.07 O ATOM 187 ND2 ASN 26 25.985 19.830 10.637 1.00 74.07 N ATOM 188 C ASN 26 27.276 23.679 9.853 1.00 74.07 C ATOM 189 O ASN 26 28.399 23.533 9.372 1.00 74.07 O ATOM 190 N GLU 27 26.621 24.861 9.807 1.00111.29 N ATOM 191 CA GLU 27 27.158 26.005 9.109 1.00111.29 C ATOM 192 CB GLU 27 26.198 27.205 9.074 1.00111.29 C ATOM 193 CG GLU 27 24.970 26.983 8.191 1.00111.29 C ATOM 194 CD GLU 27 24.187 28.288 8.153 1.00111.29 C ATOM 195 OE1 GLU 27 24.571 29.233 8.893 1.00111.29 O ATOM 196 OE2 GLU 27 23.196 28.357 7.379 1.00111.29 O ATOM 197 C GLU 27 28.418 26.499 9.721 1.00111.29 C ATOM 198 O GLU 27 29.378 26.792 9.014 1.00111.29 O ATOM 199 N LEU 28 28.500 26.543 11.054 1.00291.58 N ATOM 200 CA LEU 28 29.632 27.221 11.600 1.00291.58 C ATOM 201 CB LEU 28 30.968 26.546 11.234 1.00291.58 C ATOM 202 CG LEU 28 32.195 27.186 11.902 1.00291.58 C ATOM 203 CD1 LEU 28 32.119 27.051 13.433 1.00291.58 C ATOM 204 CD2 LEU 28 33.502 26.619 11.325 1.00291.58 C ATOM 205 C LEU 28 29.589 28.612 11.052 1.00291.58 C ATOM 206 O LEU 28 30.571 29.149 10.542 1.00291.58 O ATOM 207 N ARG 29 28.387 29.208 11.182 1.00345.48 N ATOM 208 CA ARG 29 28.029 30.558 10.857 1.00345.48 C ATOM 209 CB ARG 29 26.831 30.695 9.900 1.00345.48 C ATOM 210 CG ARG 29 27.181 30.435 8.433 1.00345.48 C ATOM 211 CD ARG 29 27.069 31.674 7.537 1.00345.48 C ATOM 212 NE ARG 29 27.795 32.796 8.195 1.00345.48 N ATOM 213 CZ ARG 29 29.141 32.951 8.018 1.00345.48 C ATOM 214 NH1 ARG 29 29.843 32.047 7.274 1.00345.48 N ATOM 215 NH2 ARG 29 29.783 34.012 8.588 1.00345.48 N ATOM 216 C ARG 29 27.613 31.074 12.174 1.00345.48 C ATOM 217 O ARG 29 27.517 30.299 13.124 1.00345.48 O ATOM 218 N VAL 30 27.412 32.395 12.278 1.00166.05 N ATOM 219 CA VAL 30 27.029 32.934 13.540 1.00166.05 C ATOM 220 CB VAL 30 26.739 34.406 13.516 1.00166.05 C ATOM 221 CG1 VAL 30 28.025 35.150 13.118 1.00166.05 C ATOM 222 CG2 VAL 30 25.546 34.659 12.581 1.00166.05 C ATOM 223 C VAL 30 25.800 32.241 13.955 1.00166.05 C ATOM 224 O VAL 30 25.107 31.635 13.138 1.00166.05 O ATOM 225 N THR 31 25.550 32.286 15.268 1.00178.60 N ATOM 226 CA THR 31 24.459 31.577 15.827 1.00178.60 C ATOM 227 CB THR 31 24.263 31.892 17.265 1.00178.60 C ATOM 228 OG1 THR 31 23.362 30.954 17.809 1.00178.60 O ATOM 229 CG2 THR 31 23.704 33.318 17.404 1.00178.60 C ATOM 230 C THR 31 23.226 31.957 15.083 1.00178.60 C ATOM 231 O THR 31 23.059 33.115 14.703 1.00178.60 O ATOM 232 N GLU 32 22.339 30.973 14.821 1.00249.04 N ATOM 233 CA GLU 32 21.199 31.326 14.035 1.00249.04 C ATOM 234 CB GLU 32 20.253 30.177 13.642 1.00249.04 C ATOM 235 CG GLU 32 20.838 29.217 12.604 1.00249.04 C ATOM 236 CD GLU 32 19.720 28.289 12.150 1.00249.04 C ATOM 237 OE1 GLU 32 18.574 28.457 12.646 1.00249.04 O ATOM 238 OE2 GLU 32 19.995 27.403 11.296 1.00249.04 O ATOM 239 C GLU 32 20.432 32.331 14.791 1.00249.04 C ATOM 240 O GLU 32 19.866 32.072 15.850 1.00249.04 O ATOM 241 N ARG 33 20.427 33.544 14.233 1.00363.97 N ATOM 242 CA ARG 33 19.709 34.600 14.841 1.00363.97 C ATOM 243 CB ARG 33 20.074 35.975 14.245 1.00363.97 C ATOM 244 CG ARG 33 19.926 36.063 12.728 1.00363.97 C ATOM 245 CD ARG 33 21.125 35.447 12.005 1.00363.97 C ATOM 246 NE ARG 33 20.984 35.736 10.552 1.00363.97 N ATOM 247 CZ ARG 33 21.461 36.913 10.053 1.00363.97 C ATOM 248 NH1 ARG 33 22.026 37.830 10.893 1.00363.97 N ATOM 249 NH2 ARG 33 21.379 37.171 8.716 1.00363.97 N ATOM 250 C ARG 33 18.282 34.284 14.638 1.00363.97 C ATOM 251 O ARG 33 18.000 33.336 13.901 1.00363.97 O ATOM 252 N PRO 34 17.384 34.950 15.347 1.00216.29 N ATOM 253 CA PRO 34 16.007 34.849 14.965 1.00216.29 C ATOM 254 CD PRO 34 17.655 36.217 16.023 1.00216.29 C ATOM 255 CB PRO 34 15.286 36.032 15.566 1.00216.29 C ATOM 256 CG PRO 34 16.391 37.073 15.831 1.00216.29 C ATOM 257 C PRO 34 16.143 35.257 13.552 1.00216.29 C ATOM 258 O PRO 34 16.902 36.180 13.244 1.00216.29 O ATOM 259 N PHE 35 15.520 34.535 12.645 1.00410.83 N ATOM 260 CA PHE 35 15.665 35.138 11.386 1.00410.83 C ATOM 261 CB PHE 35 15.156 34.276 10.219 1.00410.83 C ATOM 262 CG PHE 35 15.445 35.045 8.976 1.00410.83 C ATOM 263 CD1 PHE 35 16.694 34.987 8.398 1.00410.83 C ATOM 264 CD2 PHE 35 14.476 35.826 8.388 1.00410.83 C ATOM 265 CE1 PHE 35 16.970 35.695 7.253 1.00410.83 C ATOM 266 CE2 PHE 35 14.747 36.535 7.242 1.00410.83 C ATOM 267 CZ PHE 35 15.996 36.472 6.673 1.00410.83 C ATOM 268 C PHE 35 14.897 36.317 11.422 1.00410.83 C ATOM 269 O PHE 35 15.428 37.400 11.160 1.00410.83 O ATOM 270 N TRP 36 13.774 36.047 12.101 1.00478.40 N ATOM 271 CA TRP 36 12.591 36.715 11.818 1.00478.40 C ATOM 272 CB TRP 36 11.413 36.262 12.669 1.00478.40 C ATOM 273 CG TRP 36 11.078 34.875 12.190 1.00478.40 C ATOM 274 CD2 TRP 36 10.466 34.626 10.914 1.00478.40 C ATOM 275 CD1 TRP 36 11.337 33.656 12.739 1.00478.40 C ATOM 276 NE1 TRP 36 10.932 32.664 11.878 1.00478.40 N ATOM 277 CE2 TRP 36 10.392 33.247 10.754 1.00478.40 C ATOM 278 CE3 TRP 36 10.016 35.482 9.951 1.00478.40 C ATOM 279 CZ2 TRP 36 9.860 32.695 9.624 1.00478.40 C ATOM 280 CZ3 TRP 36 9.469 34.925 8.819 1.00478.40 C ATOM 281 CH2 TRP 36 9.392 33.558 8.657 1.00478.40 C ATOM 282 C TRP 36 12.821 38.101 11.739 1.00478.40 C ATOM 283 O TRP 36 13.401 38.696 12.656 1.00478.40 O ATOM 284 N ILE 37 11.957 38.544 10.801 1.00501.11 N ATOM 285 CA ILE 37 12.228 39.433 9.730 1.00501.11 C ATOM 286 CB ILE 37 10.982 40.023 9.122 1.00501.11 C ATOM 287 CG1 ILE 37 11.339 40.925 7.930 1.00501.11 C ATOM 288 CG2 ILE 37 10.141 40.697 10.221 1.00501.11 C ATOM 289 CD1 ILE 37 10.127 41.317 7.085 1.00501.11 C ATOM 290 C ILE 37 13.116 40.450 10.151 1.00501.11 C ATOM 291 O ILE 37 12.714 41.330 10.898 1.00501.11 O ATOM 292 N SER 38 14.171 40.484 9.304 1.00413.88 N ATOM 293 CA SER 38 15.532 40.660 9.666 1.00413.88 C ATOM 294 CB SER 38 16.368 41.408 8.614 1.00413.88 C ATOM 295 OG SER 38 17.709 41.535 9.062 1.00413.88 O ATOM 296 C SER 38 15.590 41.395 10.887 1.00413.88 C ATOM 297 O SER 38 15.271 42.589 10.923 1.00413.88 O ATOM 298 N SER 39 16.371 40.707 11.764 1.00364.68 N ATOM 299 CA SER 39 16.216 40.717 13.181 1.00364.68 C ATOM 300 CB SER 39 17.545 40.658 13.955 1.00364.68 C ATOM 301 OG SER 39 18.312 41.825 13.700 1.00364.68 O ATOM 302 C SER 39 15.507 41.928 13.563 1.00364.68 C ATOM 303 O SER 39 15.991 43.069 13.538 1.00364.68 O ATOM 304 N PHE 40 14.492 41.584 14.364 1.00416.83 N ATOM 305 CA PHE 40 13.231 42.228 14.499 1.00416.83 C ATOM 306 CB PHE 40 12.771 42.106 15.981 1.00416.83 C ATOM 307 CG PHE 40 11.551 42.895 16.342 1.00416.83 C ATOM 308 CD1 PHE 40 10.297 42.501 15.951 1.00416.83 C ATOM 309 CD2 PHE 40 11.661 44.024 17.126 1.00416.83 C ATOM 310 CE1 PHE 40 9.185 43.234 16.299 1.00416.83 C ATOM 311 CE2 PHE 40 10.555 44.760 17.479 1.00416.83 C ATOM 312 CZ PHE 40 9.308 44.367 17.060 1.00416.83 C ATOM 313 C PHE 40 13.269 43.659 14.082 1.00416.83 C ATOM 314 O PHE 40 13.092 44.595 14.865 1.00416.83 O ATOM 315 N ILE 41 13.590 43.820 12.760 1.00265.94 N ATOM 316 CA ILE 41 13.335 45.114 12.188 1.00265.94 C ATOM 317 CB ILE 41 13.518 45.213 10.697 1.00265.94 C ATOM 318 CG1 ILE 41 15.009 45.239 10.317 1.00265.94 C ATOM 319 CG2 ILE 41 12.744 46.451 10.212 1.00265.94 C ATOM 320 CD1 ILE 41 15.763 46.442 10.882 1.00265.94 C ATOM 321 C ILE 41 11.906 45.182 12.480 1.00265.94 C ATOM 322 O ILE 41 11.517 46.181 13.083 1.00265.94 O ATOM 323 N GLY 42 11.228 44.026 12.185 1.00191.12 N ATOM 324 CA GLY 42 9.864 43.600 12.402 1.00191.12 C ATOM 325 C GLY 42 9.925 42.230 13.049 1.00191.12 C ATOM 326 O GLY 42 10.982 41.602 13.061 1.00191.12 O ATOM 327 N ARG 43 8.791 41.711 13.592 1.00359.23 N ATOM 328 CA ARG 43 8.826 40.484 14.367 1.00359.23 C ATOM 329 CB ARG 43 8.089 40.571 15.710 1.00359.23 C ATOM 330 CG ARG 43 6.586 40.814 15.553 1.00359.23 C ATOM 331 CD ARG 43 6.198 42.266 15.265 1.00359.23 C ATOM 332 NE ARG 43 4.729 42.269 15.006 1.00359.23 N ATOM 333 CZ ARG 43 3.944 43.321 15.378 1.00359.23 C ATOM 334 NH1 ARG 43 4.496 44.429 15.953 1.00359.23 N ATOM 335 NH2 ARG 43 2.594 43.256 15.181 1.00359.23 N ATOM 336 C ARG 43 8.109 39.369 13.679 1.00359.23 C ATOM 337 O ARG 43 7.220 39.591 12.857 1.00359.23 O ATOM 338 N SER 44 8.510 38.118 14.011 1.00238.28 N ATOM 339 CA SER 44 7.794 36.991 13.491 1.00238.28 C ATOM 340 CB SER 44 8.491 36.269 12.344 1.00238.28 C ATOM 341 OG SER 44 7.705 35.171 11.905 1.00238.28 O ATOM 342 C SER 44 7.525 36.003 14.585 1.00238.28 C ATOM 343 O SER 44 8.390 35.223 14.976 1.00238.28 O ATOM 344 N LYS 45 6.277 36.030 15.086 1.00179.93 N ATOM 345 CA LYS 45 5.790 35.265 16.200 1.00179.93 C ATOM 346 CB LYS 45 4.379 35.700 16.602 1.00179.93 C ATOM 347 CG LYS 45 3.354 35.518 15.481 1.00179.93 C ATOM 348 CD LYS 45 1.899 35.627 15.942 1.00179.93 C ATOM 349 CE LYS 45 0.890 35.451 14.806 1.00179.93 C ATOM 350 NZ LYS 45 -0.490 35.503 15.339 1.00179.93 N ATOM 351 C LYS 45 5.679 33.785 16.053 1.00179.93 C ATOM 352 O LYS 45 6.121 32.999 16.896 1.00179.93 O TER END