####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS116_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 18 18 - 35 4.90 14.85 LONGEST_CONTINUOUS_SEGMENT: 18 19 - 36 4.69 14.87 LCS_AVERAGE: 38.12 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 7 16 - 22 1.69 18.01 LONGEST_CONTINUOUS_SEGMENT: 7 32 - 38 1.93 14.21 LONGEST_CONTINUOUS_SEGMENT: 7 33 - 39 1.01 16.48 LONGEST_CONTINUOUS_SEGMENT: 7 39 - 45 1.54 15.83 LCS_AVERAGE: 13.89 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 6 17 - 22 0.83 20.96 LONGEST_CONTINUOUS_SEGMENT: 6 23 - 28 0.93 22.25 LONGEST_CONTINUOUS_SEGMENT: 6 33 - 38 0.98 15.82 LONGEST_CONTINUOUS_SEGMENT: 6 34 - 39 0.59 16.59 LCS_AVERAGE: 10.80 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 16 3 3 3 3 5 8 10 11 12 14 15 19 22 25 26 29 30 31 32 36 LCS_GDT V 3 V 3 3 4 16 3 3 4 4 6 7 9 11 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT Q 4 Q 4 3 6 16 3 3 4 6 6 7 9 10 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT G 5 G 5 3 6 16 1 3 4 6 6 9 10 12 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT P 6 P 6 3 6 16 2 3 4 6 8 9 10 12 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT W 7 W 7 4 6 16 3 4 4 6 8 9 10 12 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT V 8 V 8 4 6 16 3 4 4 5 6 8 10 12 14 14 15 21 22 25 26 29 30 31 32 36 LCS_GDT G 9 G 9 4 6 16 4 4 4 6 8 9 10 12 14 15 19 21 22 25 26 29 30 31 32 36 LCS_GDT S 10 S 10 4 5 16 4 4 4 4 6 7 7 10 14 15 19 21 22 25 26 29 30 31 32 36 LCS_GDT S 11 S 11 4 5 16 4 4 4 4 6 7 8 12 14 14 15 21 22 25 26 29 30 31 32 36 LCS_GDT Y 12 Y 12 4 5 16 4 4 4 6 8 9 10 12 14 14 19 21 22 25 26 29 30 31 32 36 LCS_GDT V 13 V 13 3 5 16 3 3 3 6 8 9 10 12 14 15 19 21 22 25 26 29 30 31 32 36 LCS_GDT A 14 A 14 3 3 17 3 3 3 6 8 9 10 12 14 15 19 21 22 25 26 29 30 31 32 36 LCS_GDT E 15 E 15 4 5 17 3 3 4 4 4 7 7 9 10 14 19 21 22 25 26 28 30 31 31 34 LCS_GDT T 16 T 16 4 7 17 3 3 4 5 6 8 8 10 14 15 19 21 22 25 26 29 30 31 32 36 LCS_GDT G 17 G 17 6 7 17 4 5 6 6 7 8 8 10 13 16 17 19 22 25 26 29 30 31 32 36 LCS_GDT Q 18 Q 18 6 7 18 4 5 6 6 7 8 9 10 13 16 17 19 22 25 26 29 30 31 32 36 LCS_GDT N 19 N 19 6 7 18 4 5 6 6 7 8 10 11 12 13 15 16 18 22 23 25 27 30 32 36 LCS_GDT W 20 W 20 6 7 18 4 5 6 6 7 8 10 11 12 13 15 16 18 22 23 25 25 29 31 36 LCS_GDT A 21 A 21 6 7 18 3 4 6 6 7 8 10 11 11 13 14 15 17 17 18 19 20 23 27 29 LCS_GDT S 22 S 22 6 7 18 3 5 6 6 7 8 10 11 12 13 15 16 18 22 23 26 28 30 32 36 LCS_GDT L 23 L 23 6 6 18 5 5 5 6 6 7 10 11 12 13 15 16 18 22 23 26 28 30 32 36 LCS_GDT A 24 A 24 6 6 18 5 5 5 6 6 6 6 8 10 12 14 15 16 17 19 23 25 26 27 31 LCS_GDT A 25 A 25 6 6 18 5 5 5 6 6 6 6 7 9 12 13 15 16 17 18 19 21 26 27 31 LCS_GDT N 26 N 26 6 6 18 5 5 5 6 6 8 10 11 12 13 15 17 19 23 24 29 29 31 32 36 LCS_GDT E 27 E 27 6 6 18 5 5 5 6 6 8 10 11 13 16 17 19 22 25 26 29 30 31 32 36 LCS_GDT L 28 L 28 6 6 18 3 3 4 6 7 8 10 11 13 16 17 19 22 25 26 29 30 31 32 36 LCS_GDT R 29 R 29 3 5 18 3 3 4 6 7 8 10 11 13 16 17 19 22 25 26 29 30 31 32 36 LCS_GDT V 30 V 30 3 5 18 3 3 3 5 5 8 10 11 12 16 17 19 22 25 26 29 30 31 32 36 LCS_GDT T 31 T 31 4 5 18 3 4 4 6 7 8 10 11 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT E 32 E 32 4 7 18 3 4 4 5 6 7 9 11 13 15 19 21 22 25 26 29 30 31 32 36 LCS_GDT R 33 R 33 6 7 18 3 4 6 7 7 8 9 11 12 13 19 21 22 25 26 29 30 31 32 36 LCS_GDT P 34 P 34 6 7 18 3 6 6 7 7 8 9 11 12 13 15 17 18 22 24 29 30 31 32 36 LCS_GDT F 35 F 35 6 7 18 3 6 6 7 7 8 10 11 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT W 36 W 36 6 7 18 4 6 6 7 7 8 10 11 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT I 37 I 37 6 7 17 4 6 6 7 7 8 10 11 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT S 38 S 38 6 7 17 4 6 6 7 7 8 10 11 14 16 19 21 22 25 26 29 30 31 32 36 LCS_GDT S 39 S 39 6 7 16 4 6 6 7 7 7 9 10 12 14 17 19 22 25 26 29 30 31 32 36 LCS_GDT F 40 F 40 5 7 15 3 4 5 6 7 7 8 9 11 11 11 12 14 15 19 21 26 30 32 36 LCS_GDT I 41 I 41 5 7 15 3 4 5 6 7 7 8 9 11 11 11 12 13 15 18 20 25 30 32 36 LCS_GDT G 42 G 42 5 7 14 3 4 5 6 8 9 10 12 14 14 15 16 16 18 20 22 25 30 32 34 LCS_GDT R 43 R 43 5 7 14 3 4 5 6 8 9 10 12 14 14 15 16 17 19 20 20 22 22 23 29 LCS_GDT S 44 S 44 4 7 14 3 4 4 6 7 9 10 12 14 14 15 16 18 19 20 21 22 22 24 29 LCS_GDT K 45 K 45 4 7 14 3 4 4 6 7 7 10 12 14 14 15 16 18 19 20 21 22 22 23 25 LCS_AVERAGE LCS_A: 20.94 ( 10.80 13.89 38.12 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 5 6 6 7 8 9 10 12 14 16 19 21 22 25 26 29 30 31 32 36 GDT PERCENT_AT 11.36 13.64 13.64 15.91 18.18 20.45 22.73 27.27 31.82 36.36 43.18 47.73 50.00 56.82 59.09 65.91 68.18 70.45 72.73 81.82 GDT RMS_LOCAL 0.21 0.59 0.59 1.01 1.81 1.95 2.23 2.51 2.98 3.94 4.13 8.15 4.58 5.03 5.14 5.64 5.76 5.95 6.49 7.25 GDT RMS_ALL_AT 23.47 16.59 16.59 16.48 20.28 20.34 20.09 20.03 20.28 9.86 11.44 11.44 11.08 10.66 10.56 9.85 9.94 9.79 9.39 9.13 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 8.421 0 0.590 0.581 9.677 0.000 0.000 - LGA V 3 V 3 9.075 0 0.597 0.607 13.187 0.000 0.000 10.655 LGA Q 4 Q 4 5.047 0 0.643 1.199 9.266 17.273 7.677 8.841 LGA G 5 G 5 3.520 0 0.573 0.573 3.665 15.000 15.000 - LGA P 6 P 6 2.350 0 0.014 0.258 4.013 41.818 28.831 4.013 LGA W 7 W 7 0.971 0 0.459 1.080 5.560 56.364 46.234 0.876 LGA V 8 V 8 3.187 0 0.658 0.660 5.571 26.364 15.844 5.275 LGA G 9 G 9 1.682 0 0.474 0.474 2.487 47.727 47.727 - LGA S 10 S 10 5.435 0 0.020 0.154 8.451 2.273 1.515 8.451 LGA S 11 S 11 5.077 0 0.116 0.657 6.997 7.727 5.152 6.997 LGA Y 12 Y 12 2.359 0 0.631 1.365 3.802 45.000 44.242 1.157 LGA V 13 V 13 2.353 0 0.596 1.455 5.164 48.182 28.571 5.164 LGA A 14 A 14 1.825 0 0.620 0.599 3.359 36.364 42.182 - LGA E 15 E 15 7.724 0 0.654 1.342 13.809 0.000 0.000 13.809 LGA T 16 T 16 11.749 0 0.662 1.381 14.409 0.000 0.000 14.409 LGA G 17 G 17 13.367 0 0.630 0.630 16.401 0.000 0.000 - LGA Q 18 Q 18 20.029 0 0.083 0.368 23.649 0.000 0.000 23.649 LGA N 19 N 19 23.814 0 0.040 0.872 27.911 0.000 0.000 20.123 LGA W 20 W 20 30.411 0 0.202 1.014 38.786 0.000 0.000 38.786 LGA A 21 A 21 32.883 0 0.635 0.588 35.213 0.000 0.000 - LGA S 22 S 22 33.989 0 0.625 0.715 34.430 0.000 0.000 32.818 LGA L 23 L 23 34.566 0 0.628 0.549 39.021 0.000 0.000 39.021 LGA A 24 A 24 31.811 0 0.040 0.039 33.115 0.000 0.000 - LGA A 25 A 25 35.416 0 0.043 0.050 38.018 0.000 0.000 - LGA N 26 N 26 34.243 0 0.019 1.132 36.576 0.000 0.000 34.850 LGA E 27 E 27 27.997 0 0.650 0.738 30.268 0.000 0.000 26.503 LGA L 28 L 28 26.629 0 0.235 0.208 27.666 0.000 0.000 23.183 LGA R 29 R 29 28.113 0 0.596 1.407 29.738 0.000 0.000 24.801 LGA V 30 V 30 30.513 0 0.618 0.575 32.117 0.000 0.000 31.843 LGA T 31 T 31 31.180 0 0.739 1.403 32.311 0.000 0.000 29.746 LGA E 32 E 32 30.438 0 0.065 1.336 31.138 0.000 0.000 29.840 LGA R 33 R 33 29.750 0 0.140 1.322 30.790 0.000 0.000 30.790 LGA P 34 P 34 26.869 0 0.275 0.306 31.388 0.000 0.000 30.524 LGA F 35 F 35 21.228 0 0.088 1.380 24.457 0.000 0.000 24.404 LGA W 36 W 36 16.432 0 0.129 1.095 17.983 0.000 0.000 14.388 LGA I 37 I 37 15.040 0 0.080 1.663 15.264 0.000 0.000 13.097 LGA S 38 S 38 11.076 0 0.194 0.683 12.400 0.000 0.000 9.775 LGA S 39 S 39 13.101 0 0.619 0.898 16.205 0.000 0.000 16.205 LGA F 40 F 40 12.739 0 0.058 1.432 20.473 0.000 0.000 20.473 LGA I 41 I 41 8.682 0 0.197 1.446 13.120 0.455 0.227 13.120 LGA G 42 G 42 2.794 0 0.428 0.428 4.740 36.364 36.364 - LGA R 43 R 43 0.820 0 0.051 1.712 7.546 59.091 44.132 7.546 LGA S 44 S 44 2.889 0 0.053 0.660 3.875 28.636 22.727 3.840 LGA K 45 K 45 3.561 0 0.104 1.005 10.188 7.273 5.253 10.188 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.919 8.813 10.252 10.816 8.902 4.675 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 2.51 30.682 25.693 0.459 LGA_LOCAL RMSD: 2.513 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 20.027 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.919 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.478145 * X + -0.859968 * Y + -0.178417 * Z + 44.296055 Y_new = 0.862048 * X + 0.420646 * Y + 0.282719 * Z + 30.787058 Z_new = -0.168079 * X + -0.288985 * Y + 0.942463 * Z + 17.859745 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.064381 0.168881 -0.297526 [DEG: 60.9846 9.6761 -17.0470 ] ZXZ: -2.578636 0.340873 -2.614799 [DEG: -147.7449 19.5306 -149.8169 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS116_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 2.51 25.693 8.92 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS116_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT 3vmvA ATOM 9 N ALA 2 14.677 33.124 7.151 1.00 31.88 N ATOM 10 CA ALA 2 14.824 34.342 6.418 1.00 31.88 C ATOM 11 CB ALA 2 16.235 34.511 5.830 1.00 31.88 C ATOM 12 C ALA 2 13.871 34.337 5.269 1.00 31.88 C ATOM 13 O ALA 2 13.218 35.337 4.998 1.00 31.88 O ATOM 14 N VAL 3 13.741 33.199 4.566 1.00 27.38 N ATOM 15 CA VAL 3 12.921 33.185 3.390 1.00 27.38 C ATOM 16 CB VAL 3 12.954 31.870 2.671 1.00 27.38 C ATOM 17 CG1 VAL 3 11.958 31.928 1.500 1.00 27.38 C ATOM 18 CG2 VAL 3 14.404 31.594 2.238 1.00 27.38 C ATOM 19 C VAL 3 11.500 33.480 3.746 1.00 27.38 C ATOM 20 O VAL 3 10.828 34.245 3.056 1.00 27.38 O ATOM 21 N GLN 4 11.003 32.895 4.850 1.00107.83 N ATOM 22 CA GLN 4 9.621 33.057 5.196 1.00107.83 C ATOM 23 CB GLN 4 9.170 32.203 6.388 1.00107.83 C ATOM 24 CG GLN 4 9.116 30.710 6.065 1.00107.83 C ATOM 25 CD GLN 4 8.415 30.017 7.222 1.00107.83 C ATOM 26 OE1 GLN 4 8.172 28.813 7.184 1.00107.83 O ATOM 27 NE2 GLN 4 8.069 30.802 8.277 1.00107.83 N ATOM 28 C GLN 4 9.297 34.483 5.515 1.00107.83 C ATOM 29 O GLN 4 8.201 34.948 5.205 1.00107.83 O ATOM 30 N GLY 5 10.229 35.226 6.139 1.00110.51 N ATOM 31 CA GLY 5 9.879 36.550 6.575 1.00110.51 C ATOM 32 C GLY 5 9.421 37.396 5.419 1.00110.51 C ATOM 33 O GLY 5 8.392 38.059 5.535 1.00110.51 O ATOM 34 N PRO 6 10.133 37.450 4.326 1.00 93.65 N ATOM 35 CA PRO 6 9.655 38.221 3.207 1.00 93.65 C ATOM 36 CD PRO 6 11.577 37.536 4.413 1.00 93.65 C ATOM 37 CB PRO 6 10.877 38.569 2.351 1.00 93.65 C ATOM 38 CG PRO 6 12.027 37.754 2.962 1.00 93.65 C ATOM 39 C PRO 6 8.558 37.564 2.437 1.00 93.65 C ATOM 40 O PRO 6 7.919 38.237 1.629 1.00 93.65 O ATOM 41 N TRP 7 8.331 36.258 2.648 1.00112.18 N ATOM 42 CA TRP 7 7.361 35.556 1.862 1.00112.18 C ATOM 43 CB TRP 7 7.574 34.033 1.876 1.00112.18 C ATOM 44 CG TRP 7 6.583 33.246 1.056 1.00112.18 C ATOM 45 CD2 TRP 7 6.564 33.228 -0.380 1.00112.18 C ATOM 46 CD1 TRP 7 5.547 32.460 1.467 1.00112.18 C ATOM 47 NE1 TRP 7 4.889 31.944 0.377 1.00112.18 N ATOM 48 CE2 TRP 7 5.502 32.412 -0.767 1.00112.18 C ATOM 49 CE3 TRP 7 7.364 33.846 -1.300 1.00112.18 C ATOM 50 CZ2 TRP 7 5.221 32.197 -2.085 1.00112.18 C ATOM 51 CZ3 TRP 7 7.081 33.625 -2.630 1.00112.18 C ATOM 52 CH2 TRP 7 6.031 32.817 -3.013 1.00112.18 C ATOM 53 C TRP 7 5.993 35.884 2.359 1.00112.18 C ATOM 54 O TRP 7 5.823 36.416 3.454 1.00112.18 O ATOM 55 N VAL 8 4.971 35.611 1.526 1.00184.45 N ATOM 56 CA VAL 8 3.625 35.894 1.925 1.00184.45 C ATOM 57 CB VAL 8 2.640 35.816 0.794 1.00184.45 C ATOM 58 CG1 VAL 8 1.226 36.014 1.363 1.00184.45 C ATOM 59 CG2 VAL 8 3.038 36.842 -0.280 1.00184.45 C ATOM 60 C VAL 8 3.250 34.835 2.906 1.00184.45 C ATOM 61 O VAL 8 3.364 33.645 2.620 1.00184.45 O ATOM 62 N GLY 9 2.756 35.242 4.091 1.00235.35 N ATOM 63 CA GLY 9 2.442 34.263 5.088 1.00235.35 C ATOM 64 C GLY 9 3.673 33.998 5.899 1.00235.35 C ATOM 65 O GLY 9 3.982 32.856 6.231 1.00235.35 O ATOM 66 N SER 10 4.418 35.074 6.221 1.00 73.84 N ATOM 67 CA SER 10 5.625 34.982 6.994 1.00 73.84 C ATOM 68 CB SER 10 6.389 36.319 7.063 1.00 73.84 C ATOM 69 OG SER 10 5.610 37.308 7.723 1.00 73.84 O ATOM 70 C SER 10 5.304 34.542 8.394 1.00 73.84 C ATOM 71 O SER 10 6.149 33.957 9.071 1.00 73.84 O ATOM 72 N SER 11 4.081 34.837 8.872 1.00 57.46 N ATOM 73 CA SER 11 3.653 34.499 10.201 1.00 57.46 C ATOM 74 CB SER 11 2.358 35.229 10.598 1.00 57.46 C ATOM 75 OG SER 11 2.553 36.634 10.536 1.00 57.46 O ATOM 76 C SER 11 3.381 33.029 10.306 1.00 57.46 C ATOM 77 O SER 11 3.388 32.481 11.407 1.00 57.46 O ATOM 78 N TYR 12 3.140 32.343 9.173 1.00186.03 N ATOM 79 CA TYR 12 2.754 30.960 9.233 1.00186.03 C ATOM 80 CB TYR 12 2.493 30.309 7.869 1.00186.03 C ATOM 81 CG TYR 12 1.210 30.912 7.421 1.00186.03 C ATOM 82 CD1 TYR 12 0.017 30.336 7.794 1.00186.03 C ATOM 83 CD2 TYR 12 1.191 32.061 6.664 1.00186.03 C ATOM 84 CE1 TYR 12 -1.179 30.883 7.402 1.00186.03 C ATOM 85 CE2 TYR 12 -0.004 32.614 6.268 1.00186.03 C ATOM 86 CZ TYR 12 -1.190 32.024 6.638 1.00186.03 C ATOM 87 OH TYR 12 -2.417 32.592 6.233 1.00186.03 O ATOM 88 C TYR 12 3.732 30.151 10.015 1.00186.03 C ATOM 89 O TYR 12 4.948 30.273 9.872 1.00186.03 O ATOM 90 N VAL 13 3.173 29.295 10.892 1.00110.08 N ATOM 91 CA VAL 13 3.911 28.478 11.806 1.00110.08 C ATOM 92 CB VAL 13 3.008 27.656 12.675 1.00110.08 C ATOM 93 CG1 VAL 13 2.156 28.604 13.538 1.00110.08 C ATOM 94 CG2 VAL 13 2.174 26.744 11.758 1.00110.08 C ATOM 95 C VAL 13 4.772 27.531 11.039 1.00110.08 C ATOM 96 O VAL 13 4.357 26.976 10.023 1.00110.08 O ATOM 97 N ALA 14 6.021 27.338 11.512 1.00 36.60 N ATOM 98 CA ALA 14 6.895 26.424 10.840 1.00 36.60 C ATOM 99 CB ALA 14 7.972 27.114 9.986 1.00 36.60 C ATOM 100 C ALA 14 7.627 25.620 11.870 1.00 36.60 C ATOM 101 O ALA 14 8.033 26.137 12.908 1.00 36.60 O ATOM 102 N GLU 15 7.798 24.310 11.591 1.00 46.14 N ATOM 103 CA GLU 15 8.572 23.450 12.441 1.00 46.14 C ATOM 104 CB GLU 15 7.965 22.056 12.699 1.00 46.14 C ATOM 105 CG GLU 15 6.766 22.013 13.645 1.00 46.14 C ATOM 106 CD GLU 15 6.441 20.544 13.891 1.00 46.14 C ATOM 107 OE1 GLU 15 7.400 19.743 14.059 1.00 46.14 O ATOM 108 OE2 GLU 15 5.229 20.202 13.912 1.00 46.14 O ATOM 109 C GLU 15 9.815 23.162 11.673 1.00 46.14 C ATOM 110 O GLU 15 9.753 22.745 10.518 1.00 46.14 O ATOM 111 N THR 16 10.987 23.382 12.292 1.00123.99 N ATOM 112 CA THR 16 12.199 23.099 11.588 1.00123.99 C ATOM 113 CB THR 16 13.115 24.289 11.493 1.00123.99 C ATOM 114 OG1 THR 16 14.259 23.967 10.718 1.00123.99 O ATOM 115 CG2 THR 16 13.525 24.743 12.904 1.00123.99 C ATOM 116 C THR 16 12.892 22.002 12.320 1.00123.99 C ATOM 117 O THR 16 13.166 22.098 13.515 1.00123.99 O ATOM 118 N GLY 17 13.188 20.900 11.614 1.00119.54 N ATOM 119 CA GLY 17 13.860 19.839 12.295 1.00119.54 C ATOM 120 C GLY 17 15.280 19.922 11.866 1.00119.54 C ATOM 121 O GLY 17 15.567 20.031 10.674 1.00119.54 O ATOM 122 N GLN 18 16.220 19.871 12.827 1.00131.18 N ATOM 123 CA GLN 18 17.578 19.961 12.396 1.00131.18 C ATOM 124 CB GLN 18 18.433 20.970 13.174 1.00131.18 C ATOM 125 CG GLN 18 18.083 22.432 12.876 1.00131.18 C ATOM 126 CD GLN 18 18.496 22.733 11.439 1.00131.18 C ATOM 127 OE1 GLN 18 19.666 22.617 11.076 1.00131.18 O ATOM 128 NE2 GLN 18 17.506 23.125 10.594 1.00131.18 N ATOM 129 C GLN 18 18.194 18.599 12.414 1.00131.18 C ATOM 130 O GLN 18 18.293 17.933 13.443 1.00131.18 O ATOM 131 N ASN 19 18.541 18.158 11.192 1.00144.93 N ATOM 132 CA ASN 19 19.102 16.897 10.803 1.00144.93 C ATOM 133 CB ASN 19 18.970 16.653 9.287 1.00144.93 C ATOM 134 CG ASN 19 17.501 16.599 8.886 1.00144.93 C ATOM 135 OD1 ASN 19 16.611 16.511 9.729 1.00144.93 O ATOM 136 ND2 ASN 19 17.237 16.649 7.552 1.00144.93 N ATOM 137 C ASN 19 20.569 16.775 11.086 1.00144.93 C ATOM 138 O ASN 19 21.062 15.665 11.279 1.00144.93 O ATOM 139 N TRP 20 21.332 17.885 11.070 1.00119.09 N ATOM 140 CA TRP 20 22.744 17.641 11.107 1.00119.09 C ATOM 141 CB TRP 20 23.364 17.797 9.711 1.00119.09 C ATOM 142 CG TRP 20 24.729 17.186 9.567 1.00119.09 C ATOM 143 CD2 TRP 20 24.925 15.766 9.553 1.00119.09 C ATOM 144 CD1 TRP 20 25.964 17.754 9.460 1.00119.09 C ATOM 145 NE1 TRP 20 26.920 16.768 9.358 1.00119.09 N ATOM 146 CE2 TRP 20 26.292 15.541 9.420 1.00119.09 C ATOM 147 CE3 TRP 20 24.033 14.735 9.647 1.00119.09 C ATOM 148 CZ2 TRP 20 26.793 14.271 9.379 1.00119.09 C ATOM 149 CZ3 TRP 20 24.539 13.456 9.602 1.00119.09 C ATOM 150 CH2 TRP 20 25.894 13.232 9.469 1.00119.09 C ATOM 151 C TRP 20 23.410 18.582 12.061 1.00119.09 C ATOM 152 O TRP 20 22.757 19.392 12.719 1.00119.09 O ATOM 153 N ALA 21 24.751 18.466 12.180 1.00 53.06 N ATOM 154 CA ALA 21 25.472 19.284 13.110 1.00 53.06 C ATOM 155 CB ALA 21 26.826 18.685 13.530 1.00 53.06 C ATOM 156 C ALA 21 25.728 20.606 12.473 1.00 53.06 C ATOM 157 O ALA 21 26.244 20.692 11.360 1.00 53.06 O ATOM 158 N SER 22 25.377 21.691 13.187 1.00154.10 N ATOM 159 CA SER 22 25.584 22.981 12.614 1.00154.10 C ATOM 160 CB SER 22 24.436 23.963 12.879 1.00154.10 C ATOM 161 OG SER 22 23.242 23.483 12.277 1.00154.10 O ATOM 162 C SER 22 26.833 23.541 13.207 1.00154.10 C ATOM 163 O SER 22 27.093 23.397 14.401 1.00154.10 O ATOM 164 N LEU 23 27.657 24.177 12.352 1.00 72.40 N ATOM 165 CA LEU 23 28.901 24.747 12.775 1.00 72.40 C ATOM 166 CB LEU 23 30.138 24.035 12.203 1.00 72.40 C ATOM 167 CG LEU 23 30.338 22.604 12.725 1.00 72.40 C ATOM 168 CD1 LEU 23 31.596 21.965 12.118 1.00 72.40 C ATOM 169 CD2 LEU 23 30.331 22.570 14.261 1.00 72.40 C ATOM 170 C LEU 23 28.968 26.135 12.239 1.00 72.40 C ATOM 171 O LEU 23 28.100 26.572 11.485 1.00 72.40 O ATOM 172 N ALA 24 30.011 26.873 12.653 1.00 33.85 N ATOM 173 CA ALA 24 30.207 28.207 12.173 1.00 33.85 C ATOM 174 CB ALA 24 31.418 28.901 12.822 1.00 33.85 C ATOM 175 C ALA 24 30.459 28.145 10.697 1.00 33.85 C ATOM 176 O ALA 24 29.934 28.952 9.933 1.00 33.85 O ATOM 177 N ALA 25 31.265 27.162 10.249 1.00 32.25 N ATOM 178 CA ALA 25 31.616 27.078 8.858 1.00 32.25 C ATOM 179 CB ALA 25 32.583 25.921 8.553 1.00 32.25 C ATOM 180 C ALA 25 30.374 26.844 8.059 1.00 32.25 C ATOM 181 O ALA 25 30.200 27.397 6.974 1.00 32.25 O ATOM 182 N ASN 26 29.486 25.997 8.598 1.00116.00 N ATOM 183 CA ASN 26 28.267 25.584 7.968 1.00116.00 C ATOM 184 CB ASN 26 27.579 24.486 8.798 1.00116.00 C ATOM 185 CG ASN 26 26.494 23.836 7.965 1.00116.00 C ATOM 186 OD1 ASN 26 25.578 24.505 7.490 1.00116.00 O ATOM 187 ND2 ASN 26 26.599 22.491 7.785 1.00116.00 N ATOM 188 C ASN 26 27.307 26.732 7.819 1.00116.00 C ATOM 189 O ASN 26 26.607 26.818 6.813 1.00116.00 O ATOM 190 N GLU 27 27.229 27.640 8.815 1.00133.71 N ATOM 191 CA GLU 27 26.258 28.705 8.781 1.00133.71 C ATOM 192 CB GLU 27 25.665 29.049 10.160 1.00133.71 C ATOM 193 CG GLU 27 24.866 30.358 10.177 1.00133.71 C ATOM 194 CD GLU 27 23.636 30.214 9.292 1.00133.71 C ATOM 195 OE1 GLU 27 23.101 29.077 9.197 1.00133.71 O ATOM 196 OE2 GLU 27 23.215 31.244 8.697 1.00133.71 O ATOM 197 C GLU 27 26.834 29.962 8.214 1.00133.71 C ATOM 198 O GLU 27 28.036 30.212 8.281 1.00133.71 O ATOM 199 N LEU 28 25.944 30.768 7.596 1.00 49.39 N ATOM 200 CA LEU 28 26.262 32.038 7.012 1.00 49.39 C ATOM 201 CB LEU 28 25.093 32.632 6.204 1.00 49.39 C ATOM 202 CG LEU 28 24.710 31.807 4.963 1.00 49.39 C ATOM 203 CD1 LEU 28 23.580 32.485 4.171 1.00 49.39 C ATOM 204 CD2 LEU 28 25.942 31.499 4.098 1.00 49.39 C ATOM 205 C LEU 28 26.597 33.024 8.088 1.00 49.39 C ATOM 206 O LEU 28 27.518 33.826 7.935 1.00 49.39 O ATOM 207 N ARG 29 25.854 32.988 9.211 1.00137.99 N ATOM 208 CA ARG 29 26.041 33.958 10.252 1.00137.99 C ATOM 209 CB ARG 29 24.710 34.534 10.764 1.00137.99 C ATOM 210 CG ARG 29 23.941 35.313 9.697 1.00137.99 C ATOM 211 CD ARG 29 24.371 36.774 9.616 1.00137.99 C ATOM 212 NE ARG 29 25.857 36.786 9.712 1.00137.99 N ATOM 213 CZ ARG 29 26.529 37.970 9.655 1.00137.99 C ATOM 214 NH1 ARG 29 25.840 39.131 9.448 1.00137.99 N ATOM 215 NH2 ARG 29 27.885 37.992 9.810 1.00137.99 N ATOM 216 C ARG 29 26.719 33.298 11.412 1.00137.99 C ATOM 217 O ARG 29 26.751 32.075 11.524 1.00137.99 O ATOM 218 N VAL 30 27.298 34.129 12.301 1.00 67.39 N ATOM 219 CA VAL 30 27.999 33.707 13.483 1.00 67.39 C ATOM 220 CB VAL 30 28.550 34.859 14.247 1.00 67.39 C ATOM 221 CG1 VAL 30 28.986 34.293 15.593 1.00 67.39 C ATOM 222 CG2 VAL 30 29.686 35.522 13.449 1.00 67.39 C ATOM 223 C VAL 30 27.051 33.011 14.404 1.00 67.39 C ATOM 224 O VAL 30 27.423 32.095 15.145 1.00 67.39 O ATOM 225 N THR 31 25.799 33.477 14.428 1.00114.40 N ATOM 226 CA THR 31 24.807 32.907 15.284 1.00114.40 C ATOM 227 CB THR 31 24.352 33.891 16.329 1.00114.40 C ATOM 228 OG1 THR 31 23.367 33.323 17.175 1.00114.40 O ATOM 229 CG2 THR 31 23.794 35.143 15.626 1.00114.40 C ATOM 230 C THR 31 23.638 32.638 14.398 1.00114.40 C ATOM 231 O THR 31 23.578 33.177 13.291 1.00114.40 O ATOM 232 N GLU 32 22.706 31.758 14.811 1.00 89.43 N ATOM 233 CA GLU 32 21.537 31.664 13.994 1.00 89.43 C ATOM 234 CB GLU 32 20.837 30.294 13.971 1.00 89.43 C ATOM 235 CG GLU 32 21.594 29.253 13.145 1.00 89.43 C ATOM 236 CD GLU 32 20.653 28.093 12.849 1.00 89.43 C ATOM 237 OE1 GLU 32 19.998 27.590 13.801 1.00 89.43 O ATOM 238 OE2 GLU 32 20.579 27.691 11.657 1.00 89.43 O ATOM 239 C GLU 32 20.617 32.688 14.565 1.00 89.43 C ATOM 240 O GLU 32 20.333 32.684 15.762 1.00 89.43 O ATOM 241 N ARG 33 20.131 33.626 13.733 1.00185.94 N ATOM 242 CA ARG 33 19.386 34.668 14.369 1.00185.94 C ATOM 243 CB ARG 33 19.859 36.086 13.981 1.00185.94 C ATOM 244 CG ARG 33 19.757 36.391 12.485 1.00185.94 C ATOM 245 CD ARG 33 20.164 37.819 12.109 1.00185.94 C ATOM 246 NE ARG 33 21.644 37.925 12.248 1.00185.94 N ATOM 247 CZ ARG 33 22.350 38.791 11.462 1.00185.94 C ATOM 248 NH1 ARG 33 21.706 39.561 10.536 1.00185.94 N ATOM 249 NH2 ARG 33 23.704 38.886 11.597 1.00185.94 N ATOM 250 C ARG 33 17.923 34.583 14.082 1.00185.94 C ATOM 251 O ARG 33 17.465 34.973 13.007 1.00185.94 O ATOM 252 N PRO 34 17.169 34.047 15.014 1.00185.92 N ATOM 253 CA PRO 34 15.752 34.170 14.859 1.00185.92 C ATOM 254 CD PRO 34 17.518 32.753 15.582 1.00185.92 C ATOM 255 CB PRO 34 15.127 33.159 15.810 1.00185.92 C ATOM 256 CG PRO 34 16.182 32.038 15.854 1.00185.92 C ATOM 257 C PRO 34 15.381 35.600 15.073 1.00185.92 C ATOM 258 O PRO 34 15.199 36.036 16.212 1.00185.92 O ATOM 259 N PHE 35 15.154 36.306 13.959 1.00135.17 N ATOM 260 CA PHE 35 14.836 37.701 13.938 1.00135.17 C ATOM 261 CB PHE 35 16.048 38.590 13.595 1.00135.17 C ATOM 262 CG PHE 35 17.007 38.702 14.730 1.00135.17 C ATOM 263 CD1 PHE 35 17.622 37.593 15.264 1.00135.17 C ATOM 264 CD2 PHE 35 17.339 39.947 15.213 1.00135.17 C ATOM 265 CE1 PHE 35 18.510 37.724 16.306 1.00135.17 C ATOM 266 CE2 PHE 35 18.226 40.086 16.254 1.00135.17 C ATOM 267 CZ PHE 35 18.813 38.971 16.802 1.00135.17 C ATOM 268 C PHE 35 13.982 37.850 12.736 1.00135.17 C ATOM 269 O PHE 35 14.050 37.028 11.825 1.00135.17 O ATOM 270 N TRP 36 13.147 38.897 12.680 1.00 94.03 N ATOM 271 CA TRP 36 12.437 39.047 11.455 1.00 94.03 C ATOM 272 CB TRP 36 11.256 40.029 11.511 1.00 94.03 C ATOM 273 CG TRP 36 10.304 39.844 10.353 1.00 94.03 C ATOM 274 CD2 TRP 36 9.299 40.781 9.929 1.00 94.03 C ATOM 275 CD1 TRP 36 10.201 38.767 9.522 1.00 94.03 C ATOM 276 NE1 TRP 36 9.195 38.970 8.610 1.00 94.03 N ATOM 277 CE2 TRP 36 8.630 40.204 8.849 1.00 94.03 C ATOM 278 CE3 TRP 36 8.960 42.021 10.395 1.00 94.03 C ATOM 279 CZ2 TRP 36 7.608 40.859 8.222 1.00 94.03 C ATOM 280 CZ3 TRP 36 7.924 42.675 9.764 1.00 94.03 C ATOM 281 CH2 TRP 36 7.262 42.104 8.697 1.00 94.03 C ATOM 282 C TRP 36 13.471 39.589 10.523 1.00 94.03 C ATOM 283 O TRP 36 14.400 40.265 10.963 1.00 94.03 O ATOM 284 N ILE 37 13.350 39.308 9.212 1.00147.71 N ATOM 285 CA ILE 37 14.367 39.740 8.299 1.00147.71 C ATOM 286 CB ILE 37 14.095 39.386 6.861 1.00147.71 C ATOM 287 CG1 ILE 37 12.830 40.094 6.351 1.00147.71 C ATOM 288 CG2 ILE 37 14.015 37.853 6.756 1.00147.71 C ATOM 289 CD1 ILE 37 11.553 39.640 7.054 1.00147.71 C ATOM 290 C ILE 37 14.459 41.222 8.393 1.00147.71 C ATOM 291 O ILE 37 15.549 41.789 8.324 1.00147.71 O ATOM 292 N SER 38 13.306 41.887 8.570 1.00122.75 N ATOM 293 CA SER 38 13.293 43.316 8.601 1.00122.75 C ATOM 294 CB SER 38 11.900 43.891 8.887 1.00122.75 C ATOM 295 OG SER 38 11.027 43.597 7.808 1.00122.75 O ATOM 296 C SER 38 14.261 43.820 9.631 1.00122.75 C ATOM 297 O SER 38 15.141 44.594 9.281 1.00122.75 O ATOM 298 N SER 39 14.167 43.407 10.910 1.00241.50 N ATOM 299 CA SER 39 15.109 43.911 11.884 1.00241.50 C ATOM 300 CB SER 39 15.129 45.445 12.091 1.00241.50 C ATOM 301 OG SER 39 15.970 46.113 11.163 1.00241.50 O ATOM 302 C SER 39 14.737 43.396 13.224 1.00241.50 C ATOM 303 O SER 39 14.306 42.260 13.391 1.00241.50 O ATOM 304 N PHE 40 14.972 44.241 14.234 1.00145.88 N ATOM 305 CA PHE 40 14.583 44.083 15.601 1.00145.88 C ATOM 306 CB PHE 40 15.479 44.888 16.560 1.00145.88 C ATOM 307 CG PHE 40 15.402 46.318 16.158 1.00145.88 C ATOM 308 CD1 PHE 40 16.146 46.778 15.095 1.00145.88 C ATOM 309 CD2 PHE 40 14.600 47.198 16.845 1.00145.88 C ATOM 310 CE1 PHE 40 16.085 48.100 14.719 1.00145.88 C ATOM 311 CE2 PHE 40 14.536 48.520 16.473 1.00145.88 C ATOM 312 CZ PHE 40 15.275 48.972 15.405 1.00145.88 C ATOM 313 C PHE 40 13.151 44.480 15.835 1.00145.88 C ATOM 314 O PHE 40 12.605 44.057 16.848 1.00145.88 O ATOM 315 N ILE 41 12.537 45.375 15.008 1.00296.20 N ATOM 316 CA ILE 41 11.190 45.843 15.301 1.00296.20 C ATOM 317 CB ILE 41 11.177 47.336 15.494 1.00296.20 C ATOM 318 CG1 ILE 41 9.774 47.839 15.865 1.00296.20 C ATOM 319 CG2 ILE 41 11.794 47.997 14.248 1.00296.20 C ATOM 320 CD1 ILE 41 9.308 47.383 17.246 1.00296.20 C ATOM 321 C ILE 41 10.173 45.483 14.224 1.00296.20 C ATOM 322 O ILE 41 9.898 46.260 13.316 1.00296.20 O ATOM 323 N GLY 42 9.555 44.284 14.337 1.00123.15 N ATOM 324 CA GLY 42 8.583 43.684 13.460 1.00123.15 C ATOM 325 C GLY 42 8.520 42.198 13.757 1.00123.15 C ATOM 326 O GLY 42 9.097 41.382 13.049 1.00123.15 O ATOM 327 N ARG 43 7.674 41.789 14.714 1.00176.38 N ATOM 328 CA ARG 43 7.593 40.470 15.306 1.00176.38 C ATOM 329 CB ARG 43 6.206 40.149 15.881 1.00176.38 C ATOM 330 CG ARG 43 5.147 40.084 14.778 1.00176.38 C ATOM 331 CD ARG 43 4.236 41.307 14.681 1.00176.38 C ATOM 332 NE ARG 43 3.528 41.209 13.375 1.00176.38 N ATOM 333 CZ ARG 43 3.661 42.215 12.463 1.00176.38 C ATOM 334 NH1 ARG 43 4.347 43.347 12.798 1.00176.38 N ATOM 335 NH2 ARG 43 3.106 42.095 11.223 1.00176.38 N ATOM 336 C ARG 43 7.885 39.339 14.364 1.00176.38 C ATOM 337 O ARG 43 7.544 39.376 13.181 1.00176.38 O ATOM 338 N SER 44 8.613 38.323 14.881 1.00116.47 N ATOM 339 CA SER 44 8.758 37.096 14.150 1.00116.47 C ATOM 340 CB SER 44 10.200 36.724 13.796 1.00116.47 C ATOM 341 OG SER 44 10.224 35.499 13.077 1.00116.47 O ATOM 342 C SER 44 8.183 36.052 15.057 1.00116.47 C ATOM 343 O SER 44 8.486 36.028 16.249 1.00116.47 O ATOM 344 N LYS 45 7.322 35.156 14.529 1.00164.42 N ATOM 345 CA LYS 45 6.654 34.283 15.451 1.00164.42 C ATOM 346 CB LYS 45 5.234 34.753 15.822 1.00164.42 C ATOM 347 CG LYS 45 5.174 36.147 16.447 1.00164.42 C ATOM 348 CD LYS 45 3.751 36.599 16.794 1.00164.42 C ATOM 349 CE LYS 45 2.820 36.761 15.589 1.00164.42 C ATOM 350 NZ LYS 45 3.043 38.072 14.941 1.00164.42 N ATOM 351 C LYS 45 6.469 32.909 14.895 1.00164.42 C ATOM 352 O LYS 45 6.832 32.603 13.760 1.00164.42 O TER END