####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS116_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 20 14 - 33 4.98 18.67 LCS_AVERAGE: 39.05 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 1.83 19.71 LCS_AVERAGE: 16.22 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.83 20.21 LCS_AVERAGE: 12.35 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 6 13 3 3 5 5 6 7 9 9 10 11 11 11 12 12 12 13 14 14 17 17 LCS_GDT V 3 V 3 3 6 13 3 3 5 5 6 8 9 9 10 11 11 11 12 12 12 13 15 16 17 17 LCS_GDT Q 4 Q 4 5 6 13 3 3 5 5 6 8 9 9 10 11 11 11 12 12 12 14 15 16 20 21 LCS_GDT G 5 G 5 5 6 13 3 4 5 5 6 8 9 9 10 11 11 11 12 12 12 14 15 16 17 20 LCS_GDT P 6 P 6 5 6 13 3 4 5 5 6 8 9 9 10 11 11 11 12 12 12 14 15 16 17 19 LCS_GDT W 7 W 7 5 6 13 3 4 5 5 6 8 9 9 10 11 11 11 12 12 12 14 15 16 17 19 LCS_GDT V 8 V 8 5 6 13 3 4 5 5 6 8 9 9 10 11 11 11 12 12 12 14 15 16 17 19 LCS_GDT G 9 G 9 3 6 13 3 3 5 5 5 8 9 9 10 11 11 11 12 12 12 14 15 16 17 19 LCS_GDT S 10 S 10 3 4 13 3 3 5 5 6 8 9 9 10 11 11 11 12 12 12 14 18 20 24 25 LCS_GDT S 11 S 11 3 4 15 1 3 3 4 4 5 6 8 10 11 11 13 16 18 20 22 23 24 25 25 LCS_GDT Y 12 Y 12 3 4 15 0 3 3 3 4 4 4 6 7 10 11 14 16 18 20 22 23 24 25 25 LCS_GDT V 13 V 13 3 4 19 3 3 3 3 4 4 4 7 9 11 12 14 16 18 20 22 23 24 25 25 LCS_GDT A 14 A 14 3 4 20 3 3 3 5 7 7 10 11 12 14 15 16 17 18 20 22 23 24 25 25 LCS_GDT E 15 E 15 3 4 20 3 3 3 4 7 7 8 11 12 14 15 16 17 18 20 22 23 24 25 25 LCS_GDT T 16 T 16 4 4 20 3 3 4 4 6 7 8 9 11 12 13 16 17 18 20 22 23 24 25 25 LCS_GDT G 17 G 17 4 4 20 3 3 4 4 7 7 10 11 12 14 15 16 18 20 22 23 23 24 25 25 LCS_GDT Q 18 Q 18 4 4 20 3 3 4 5 7 7 10 11 12 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT N 19 N 19 4 4 20 3 3 4 5 7 8 11 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT W 20 W 20 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT A 21 A 21 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT S 22 S 22 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT L 23 L 23 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT A 24 A 24 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT A 25 A 25 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT N 26 N 26 10 12 20 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT E 27 E 27 10 12 20 6 9 9 10 11 11 12 12 13 13 15 16 17 19 22 23 23 24 25 25 LCS_GDT L 28 L 28 10 12 20 6 9 9 10 11 11 12 12 13 13 15 16 17 18 20 23 23 24 25 25 LCS_GDT R 29 R 29 10 12 20 3 4 8 10 11 11 12 12 13 14 15 16 17 20 22 23 23 24 25 25 LCS_GDT V 30 V 30 4 12 20 3 3 4 5 11 11 12 12 13 14 15 16 17 20 22 23 23 24 25 25 LCS_GDT T 31 T 31 4 12 20 3 3 4 5 7 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT E 32 E 32 4 6 20 3 3 4 4 6 7 8 10 12 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT R 33 R 33 3 6 20 3 3 3 5 6 7 8 10 12 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT P 34 P 34 5 6 18 4 4 5 5 6 7 8 10 12 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT F 35 F 35 5 6 18 4 4 5 5 6 7 8 10 12 14 16 17 18 20 22 23 23 24 25 25 LCS_GDT W 36 W 36 5 6 18 4 4 5 5 6 7 8 10 12 14 16 17 18 20 22 23 23 23 24 24 LCS_GDT I 37 I 37 5 6 18 4 4 5 5 6 7 8 10 11 13 15 17 18 20 22 23 23 23 24 24 LCS_GDT S 38 S 38 5 6 18 1 4 5 5 6 7 8 10 12 14 16 17 18 20 22 23 23 23 24 24 LCS_GDT S 39 S 39 3 4 18 1 3 3 3 5 7 7 10 10 11 13 15 17 20 22 23 23 23 24 24 LCS_GDT F 40 F 40 3 6 17 3 3 3 4 6 7 8 10 10 10 11 12 13 14 16 18 19 22 23 24 LCS_GDT I 41 I 41 5 6 13 5 5 5 5 6 6 8 10 10 10 11 12 13 14 17 18 19 22 23 24 LCS_GDT G 42 G 42 5 6 13 5 5 5 5 6 7 8 10 10 10 11 12 12 13 16 18 19 20 23 24 LCS_GDT R 43 R 43 5 6 13 5 5 5 5 6 7 7 9 9 10 11 11 12 12 12 13 13 13 13 13 LCS_GDT S 44 S 44 5 6 13 5 5 5 5 6 7 7 9 9 10 11 11 12 12 12 13 13 13 13 13 LCS_GDT K 45 K 45 5 6 13 5 5 5 5 6 7 7 9 9 10 10 10 12 12 12 12 12 13 13 13 LCS_AVERAGE LCS_A: 22.54 ( 12.35 16.22 39.05 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 9 10 11 11 12 12 13 14 16 17 18 20 22 23 23 24 25 25 GDT PERCENT_AT 13.64 20.45 20.45 22.73 25.00 25.00 27.27 27.27 29.55 31.82 36.36 38.64 40.91 45.45 50.00 52.27 52.27 54.55 56.82 56.82 GDT RMS_LOCAL 0.28 0.46 0.46 0.83 1.24 1.24 1.83 1.83 2.42 3.54 4.20 4.31 4.49 4.89 5.28 5.48 5.48 6.04 6.31 6.31 GDT RMS_ALL_AT 19.55 19.92 19.92 20.21 20.15 20.15 19.71 19.71 19.22 19.10 23.10 23.33 23.01 23.11 23.14 23.09 23.09 17.92 17.78 17.78 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 38.053 0 0.041 0.044 38.949 0.000 0.000 - LGA V 3 V 3 33.036 0 0.100 1.102 35.155 0.000 0.000 32.661 LGA Q 4 Q 4 29.947 0 0.605 1.217 32.083 0.000 0.000 32.083 LGA G 5 G 5 28.691 0 0.071 0.071 30.935 0.000 0.000 - LGA P 6 P 6 29.366 0 0.079 0.431 30.375 0.000 0.000 30.373 LGA W 7 W 7 27.580 0 0.452 1.120 28.383 0.000 0.000 23.476 LGA V 8 V 8 25.453 0 0.662 0.660 25.918 0.000 0.000 23.512 LGA G 9 G 9 22.697 0 0.499 0.499 23.533 0.000 0.000 - LGA S 10 S 10 22.094 0 0.674 0.858 24.991 0.000 0.000 19.358 LGA S 11 S 11 22.926 0 0.615 0.582 24.805 0.000 0.000 24.805 LGA Y 12 Y 12 19.279 0 0.658 0.988 21.750 0.000 0.000 8.556 LGA V 13 V 13 19.806 0 0.599 0.617 20.762 0.000 0.000 20.762 LGA A 14 A 14 20.974 0 0.626 0.602 22.110 0.000 0.000 - LGA E 15 E 15 18.655 0 0.629 0.998 21.757 0.000 0.000 21.757 LGA T 16 T 16 16.820 0 0.722 1.402 17.051 0.000 0.000 15.245 LGA G 17 G 17 12.617 0 0.146 0.146 14.290 0.000 0.000 - LGA Q 18 Q 18 10.254 0 0.600 1.611 13.120 0.000 0.000 11.333 LGA N 19 N 19 6.972 0 0.086 0.167 12.056 1.364 0.682 10.400 LGA W 20 W 20 0.736 0 0.596 0.529 9.014 70.909 23.896 8.920 LGA A 21 A 21 0.802 0 0.051 0.049 0.930 81.818 81.818 - LGA S 22 S 22 1.039 0 0.032 0.661 1.523 69.545 65.758 1.523 LGA L 23 L 23 1.301 0 0.081 1.023 5.171 73.636 45.909 5.171 LGA A 24 A 24 0.436 0 0.046 0.042 0.628 95.455 96.364 - LGA A 25 A 25 0.507 0 0.036 0.042 0.883 86.364 85.455 - LGA N 26 N 26 1.216 0 0.039 0.945 2.925 69.545 57.500 2.925 LGA E 27 E 27 0.784 0 0.174 0.252 2.097 66.818 79.394 1.150 LGA L 28 L 28 1.158 0 0.574 0.869 4.591 54.091 35.682 4.591 LGA R 29 R 29 2.812 0 0.624 1.462 14.423 56.364 20.661 14.423 LGA V 30 V 30 2.587 0 0.032 0.104 5.065 23.636 15.844 5.065 LGA T 31 T 31 4.215 0 0.687 0.619 8.069 5.909 17.922 4.570 LGA E 32 E 32 10.352 0 0.593 1.348 13.164 0.000 0.000 12.661 LGA R 33 R 33 15.332 0 0.054 1.192 16.320 0.000 0.000 11.895 LGA P 34 P 34 16.613 0 0.650 0.632 20.957 0.000 0.000 20.957 LGA F 35 F 35 15.267 0 0.036 1.418 18.797 0.000 0.000 18.797 LGA W 36 W 36 18.140 0 0.060 1.158 25.681 0.000 0.000 25.056 LGA I 37 I 37 20.098 0 0.653 1.542 22.220 0.000 0.000 20.471 LGA S 38 S 38 23.251 0 0.685 0.841 26.591 0.000 0.000 26.591 LGA S 39 S 39 23.994 0 0.699 0.840 24.720 0.000 0.000 23.175 LGA F 40 F 40 23.936 0 0.657 1.606 27.820 0.000 0.000 27.820 LGA I 41 I 41 28.848 0 0.095 0.639 33.664 0.000 0.000 33.664 LGA G 42 G 42 27.825 0 0.159 0.159 28.358 0.000 0.000 - LGA R 43 R 43 27.542 0 0.039 1.104 30.908 0.000 0.000 28.873 LGA S 44 S 44 24.176 0 0.050 0.079 25.808 0.000 0.000 22.045 LGA K 45 K 45 24.808 0 0.052 0.442 28.253 0.000 0.000 28.253 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 16.799 16.663 16.930 17.169 14.247 4.208 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 12 1.83 30.682 26.453 0.622 LGA_LOCAL RMSD: 1.830 Number of atoms: 12 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.706 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 16.799 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.900679 * X + 0.157429 * Y + 0.404961 * Z + -74.677513 Y_new = 0.167322 * X + -0.985840 * Y + 0.011103 * Z + 101.535423 Z_new = 0.400975 * X + 0.057759 * Y + -0.914267 * Z + -32.647694 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.183679 -0.412581 3.078501 [DEG: 10.5241 -23.6391 176.3851 ] ZXZ: 1.598207 2.724490 1.427734 [DEG: 91.5705 156.1018 81.8032 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS116_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS116_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 12 1.83 26.453 16.80 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS116_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT 3jurD1 ATOM 9 N ALA 2 -15.292 50.279 -10.181 1.00172.21 N ATOM 10 CA ALA 2 -14.543 50.604 -11.354 1.00172.21 C ATOM 11 CB ALA 2 -13.968 52.031 -11.339 1.00172.21 C ATOM 12 C ALA 2 -13.401 49.653 -11.444 1.00172.21 C ATOM 13 O ALA 2 -12.996 49.044 -10.456 1.00172.21 O ATOM 14 N VAL 3 -12.883 49.477 -12.672 1.00103.16 N ATOM 15 CA VAL 3 -11.782 48.593 -12.892 1.00103.16 C ATOM 16 CB VAL 3 -12.012 47.655 -14.036 1.00103.16 C ATOM 17 CG1 VAL 3 -12.281 48.489 -15.299 1.00103.16 C ATOM 18 CG2 VAL 3 -10.808 46.703 -14.145 1.00103.16 C ATOM 19 C VAL 3 -10.595 49.447 -13.200 1.00103.16 C ATOM 20 O VAL 3 -10.726 50.543 -13.740 1.00103.16 O ATOM 21 N GLN 4 -9.395 48.960 -12.836 1.00 73.69 N ATOM 22 CA GLN 4 -8.197 49.722 -13.025 1.00 73.69 C ATOM 23 CB GLN 4 -6.944 48.995 -12.510 1.00 73.69 C ATOM 24 CG GLN 4 -6.943 48.759 -10.998 1.00 73.69 C ATOM 25 CD GLN 4 -6.700 50.092 -10.304 1.00 73.69 C ATOM 26 OE1 GLN 4 -7.400 51.074 -10.547 1.00 73.69 O ATOM 27 NE2 GLN 4 -5.671 50.131 -9.415 1.00 73.69 N ATOM 28 C GLN 4 -8.005 49.955 -14.487 1.00 73.69 C ATOM 29 O GLN 4 -7.676 51.063 -14.906 1.00 73.69 O ATOM 30 N GLY 5 -8.231 48.916 -15.310 1.00119.70 N ATOM 31 CA GLY 5 -8.023 49.075 -16.718 1.00119.70 C ATOM 32 C GLY 5 -9.138 48.370 -17.408 1.00119.70 C ATOM 33 O GLY 5 -10.059 47.860 -16.774 1.00119.70 O ATOM 34 N PRO 6 -9.078 48.333 -18.706 1.00241.82 N ATOM 35 CA PRO 6 -10.104 47.664 -19.448 1.00241.82 C ATOM 36 CD PRO 6 -8.427 49.375 -19.480 1.00241.82 C ATOM 37 CB PRO 6 -9.814 47.975 -20.914 1.00241.82 C ATOM 38 CG PRO 6 -9.120 49.351 -20.854 1.00241.82 C ATOM 39 C PRO 6 -10.077 46.222 -19.083 1.00241.82 C ATOM 40 O PRO 6 -11.098 45.550 -19.210 1.00241.82 O ATOM 41 N TRP 7 -8.910 45.726 -18.637 1.00269.74 N ATOM 42 CA TRP 7 -8.824 44.365 -18.217 1.00269.74 C ATOM 43 CB TRP 7 -7.514 43.665 -18.620 1.00269.74 C ATOM 44 CG TRP 7 -7.443 42.228 -18.168 1.00269.74 C ATOM 45 CD2 TRP 7 -8.187 41.165 -18.782 1.00269.74 C ATOM 46 CD1 TRP 7 -6.750 41.667 -17.134 1.00269.74 C ATOM 47 NE1 TRP 7 -7.008 40.318 -17.075 1.00269.74 N ATOM 48 CE2 TRP 7 -7.894 39.996 -18.082 1.00269.74 C ATOM 49 CE3 TRP 7 -9.049 41.166 -19.841 1.00269.74 C ATOM 50 CZ2 TRP 7 -8.460 38.805 -18.432 1.00269.74 C ATOM 51 CZ3 TRP 7 -9.616 39.962 -20.195 1.00269.74 C ATOM 52 CH2 TRP 7 -9.326 38.806 -19.504 1.00269.74 C ATOM 53 C TRP 7 -8.895 44.389 -16.732 1.00269.74 C ATOM 54 O TRP 7 -8.557 45.388 -16.102 1.00269.74 O ATOM 55 N VAL 8 -9.361 43.285 -16.126 1.00 55.85 N ATOM 56 CA VAL 8 -9.472 43.289 -14.702 1.00 55.85 C ATOM 57 CB VAL 8 -10.104 42.050 -14.143 1.00 55.85 C ATOM 58 CG1 VAL 8 -10.067 42.133 -12.607 1.00 55.85 C ATOM 59 CG2 VAL 8 -11.517 41.913 -14.732 1.00 55.85 C ATOM 60 C VAL 8 -8.091 43.377 -14.154 1.00 55.85 C ATOM 61 O VAL 8 -7.176 42.697 -14.618 1.00 55.85 O ATOM 62 N GLY 9 -7.909 44.254 -13.151 1.00 63.72 N ATOM 63 CA GLY 9 -6.630 44.395 -12.531 1.00 63.72 C ATOM 64 C GLY 9 -6.588 43.384 -11.439 1.00 63.72 C ATOM 65 O GLY 9 -7.508 42.584 -11.287 1.00 63.72 O ATOM 66 N SER 10 -5.504 43.393 -10.643 1.00152.54 N ATOM 67 CA SER 10 -5.433 42.446 -9.575 1.00152.54 C ATOM 68 CB SER 10 -4.040 42.347 -8.927 1.00152.54 C ATOM 69 OG SER 10 -4.061 41.385 -7.884 1.00152.54 O ATOM 70 C SER 10 -6.391 42.894 -8.526 1.00152.54 C ATOM 71 O SER 10 -6.717 44.076 -8.423 1.00152.54 O ATOM 72 N SER 11 -6.891 41.931 -7.733 1.00207.70 N ATOM 73 CA SER 11 -7.801 42.250 -6.678 1.00207.70 C ATOM 74 CB SER 11 -9.272 41.957 -7.019 1.00207.70 C ATOM 75 OG SER 11 -10.107 42.298 -5.922 1.00207.70 O ATOM 76 C SER 11 -7.424 41.368 -5.535 1.00207.70 C ATOM 77 O SER 11 -6.650 40.426 -5.703 1.00207.70 O ATOM 78 N TYR 12 -7.939 41.666 -4.329 1.00284.99 N ATOM 79 CA TYR 12 -7.582 40.835 -3.221 1.00284.99 C ATOM 80 CB TYR 12 -6.875 41.595 -2.086 1.00284.99 C ATOM 81 CG TYR 12 -6.518 40.592 -1.046 1.00284.99 C ATOM 82 CD1 TYR 12 -5.396 39.810 -1.195 1.00284.99 C ATOM 83 CD2 TYR 12 -7.299 40.433 0.075 1.00284.99 C ATOM 84 CE1 TYR 12 -5.055 38.881 -0.242 1.00284.99 C ATOM 85 CE2 TYR 12 -6.963 39.504 1.033 1.00284.99 C ATOM 86 CZ TYR 12 -5.840 38.727 0.873 1.00284.99 C ATOM 87 OH TYR 12 -5.494 37.774 1.854 1.00284.99 O ATOM 88 C TYR 12 -8.843 40.267 -2.671 1.00284.99 C ATOM 89 O TYR 12 -9.865 40.950 -2.577 1.00284.99 O ATOM 90 N VAL 13 -8.806 38.970 -2.306 1.00 67.26 N ATOM 91 CA VAL 13 -9.962 38.306 -1.782 1.00 67.26 C ATOM 92 CB VAL 13 -10.506 37.274 -2.740 1.00 67.26 C ATOM 93 CG1 VAL 13 -11.735 36.581 -2.131 1.00 67.26 C ATOM 94 CG2 VAL 13 -10.788 37.976 -4.079 1.00 67.26 C ATOM 95 C VAL 13 -9.507 37.617 -0.529 1.00 67.26 C ATOM 96 O VAL 13 -8.307 37.505 -0.284 1.00 67.26 O ATOM 97 N ALA 14 -10.455 37.158 0.309 1.00 36.86 N ATOM 98 CA ALA 14 -10.076 36.513 1.532 1.00 36.86 C ATOM 99 CB ALA 14 -11.262 35.973 2.348 1.00 36.86 C ATOM 100 C ALA 14 -9.205 35.358 1.172 1.00 36.86 C ATOM 101 O ALA 14 -9.439 34.664 0.183 1.00 36.86 O ATOM 102 N GLU 15 -8.151 35.139 1.979 1.00140.29 N ATOM 103 CA GLU 15 -7.206 34.103 1.694 1.00140.29 C ATOM 104 CB GLU 15 -5.800 34.384 2.251 1.00140.29 C ATOM 105 CG GLU 15 -4.736 33.415 1.733 1.00140.29 C ATOM 106 CD GLU 15 -4.500 33.723 0.261 1.00140.29 C ATOM 107 OE1 GLU 15 -5.446 33.515 -0.544 1.00140.29 O ATOM 108 OE2 GLU 15 -3.372 34.172 -0.079 1.00140.29 O ATOM 109 C GLU 15 -7.684 32.823 2.289 1.00140.29 C ATOM 110 O GLU 15 -8.516 32.804 3.197 1.00140.29 O ATOM 111 N THR 16 -7.144 31.705 1.773 1.00266.93 N ATOM 112 CA THR 16 -7.527 30.416 2.250 1.00266.93 C ATOM 113 CB THR 16 -7.329 29.316 1.250 1.00266.93 C ATOM 114 OG1 THR 16 -7.893 28.106 1.733 1.00266.93 O ATOM 115 CG2 THR 16 -5.820 29.140 1.007 1.00266.93 C ATOM 116 C THR 16 -6.643 30.132 3.405 1.00266.93 C ATOM 117 O THR 16 -5.564 30.704 3.548 1.00266.93 O ATOM 118 N GLY 17 -7.107 29.273 4.320 1.00209.99 N ATOM 119 CA GLY 17 -6.273 29.079 5.454 1.00209.99 C ATOM 120 C GLY 17 -6.329 30.385 6.167 1.00209.99 C ATOM 121 O GLY 17 -5.421 30.745 6.913 1.00209.99 O ATOM 122 N GLN 18 -7.420 31.136 5.919 1.00144.26 N ATOM 123 CA GLN 18 -7.622 32.401 6.550 1.00144.26 C ATOM 124 CB GLN 18 -8.932 33.083 6.111 1.00144.26 C ATOM 125 CG GLN 18 -10.201 32.317 6.496 1.00144.26 C ATOM 126 CD GLN 18 -10.593 32.696 7.916 1.00144.26 C ATOM 127 OE1 GLN 18 -11.435 32.047 8.534 1.00144.26 O ATOM 128 NE2 GLN 18 -9.968 33.779 8.451 1.00144.26 N ATOM 129 C GLN 18 -7.714 32.068 7.988 1.00144.26 C ATOM 130 O GLN 18 -7.231 32.798 8.852 1.00144.26 O ATOM 131 N ASN 19 -8.344 30.915 8.268 1.00 49.26 N ATOM 132 CA ASN 19 -8.439 30.470 9.619 1.00 49.26 C ATOM 133 CB ASN 19 -9.174 29.126 9.771 1.00 49.26 C ATOM 134 CG ASN 19 -10.661 29.357 9.538 1.00 49.26 C ATOM 135 OD1 ASN 19 -11.249 28.819 8.602 1.00 49.26 O ATOM 136 ND2 ASN 19 -11.290 30.175 10.424 1.00 49.26 N ATOM 137 C ASN 19 -7.038 30.267 10.094 1.00 49.26 C ATOM 138 O ASN 19 -6.703 30.604 11.227 1.00 49.26 O ATOM 139 N TRP 20 -6.172 29.721 9.219 1.00 40.09 N ATOM 140 CA TRP 20 -4.811 29.476 9.602 1.00 40.09 C ATOM 141 CB TRP 20 -3.983 28.787 8.503 1.00 40.09 C ATOM 142 CG TRP 20 -4.316 27.328 8.307 1.00 40.09 C ATOM 143 CD2 TRP 20 -3.623 26.260 8.971 1.00 40.09 C ATOM 144 CD1 TRP 20 -5.267 26.744 7.523 1.00 40.09 C ATOM 145 NE1 TRP 20 -5.210 25.376 7.657 1.00 40.09 N ATOM 146 CE2 TRP 20 -4.202 25.066 8.546 1.00 40.09 C ATOM 147 CE3 TRP 20 -2.588 26.275 9.863 1.00 40.09 C ATOM 148 CZ2 TRP 20 -3.752 23.861 9.007 1.00 40.09 C ATOM 149 CZ3 TRP 20 -2.138 25.059 10.325 1.00 40.09 C ATOM 150 CH2 TRP 20 -2.710 23.875 9.907 1.00 40.09 C ATOM 151 C TRP 20 -4.155 30.780 9.917 1.00 40.09 C ATOM 152 O TRP 20 -3.437 30.899 10.909 1.00 40.09 O ATOM 153 N ALA 21 -4.401 31.805 9.084 1.00 23.14 N ATOM 154 CA ALA 21 -3.785 33.083 9.284 1.00 23.14 C ATOM 155 CB ALA 21 -4.196 34.113 8.218 1.00 23.14 C ATOM 156 C ALA 21 -4.223 33.603 10.613 1.00 23.14 C ATOM 157 O ALA 21 -3.434 34.194 11.350 1.00 23.14 O ATOM 158 N SER 22 -5.502 33.384 10.960 1.00 60.84 N ATOM 159 CA SER 22 -6.013 33.879 12.203 1.00 60.84 C ATOM 160 CB SER 22 -7.491 33.515 12.424 1.00 60.84 C ATOM 161 OG SER 22 -7.943 34.032 13.666 1.00 60.84 O ATOM 162 C SER 22 -5.228 33.259 13.311 1.00 60.84 C ATOM 163 O SER 22 -4.925 33.910 14.308 1.00 60.84 O ATOM 164 N LEU 23 -4.859 31.974 13.158 1.00130.86 N ATOM 165 CA LEU 23 -4.140 31.309 14.203 1.00130.86 C ATOM 166 CB LEU 23 -3.839 29.832 13.864 1.00130.86 C ATOM 167 CG LEU 23 -3.072 29.034 14.943 1.00130.86 C ATOM 168 CD1 LEU 23 -1.598 29.459 15.070 1.00130.86 C ATOM 169 CD2 LEU 23 -3.820 29.066 16.285 1.00130.86 C ATOM 170 C LEU 23 -2.844 32.028 14.380 1.00130.86 C ATOM 171 O LEU 23 -2.428 32.302 15.505 1.00130.86 O ATOM 172 N ALA 24 -2.179 32.372 13.264 1.00 23.95 N ATOM 173 CA ALA 24 -0.899 33.013 13.353 1.00 23.95 C ATOM 174 CB ALA 24 -0.276 33.287 11.974 1.00 23.95 C ATOM 175 C ALA 24 -1.058 34.327 14.045 1.00 23.95 C ATOM 176 O ALA 24 -0.270 34.673 14.925 1.00 23.95 O ATOM 177 N ALA 25 -2.106 35.087 13.683 1.00 22.85 N ATOM 178 CA ALA 25 -2.301 36.383 14.266 1.00 22.85 C ATOM 179 CB ALA 25 -3.522 37.119 13.689 1.00 22.85 C ATOM 180 C ALA 25 -2.530 36.217 15.731 1.00 22.85 C ATOM 181 O ALA 25 -2.010 36.979 16.544 1.00 22.85 O ATOM 182 N ASN 26 -3.302 35.184 16.106 1.00 65.93 N ATOM 183 CA ASN 26 -3.650 34.990 17.479 1.00 65.93 C ATOM 184 CB ASN 26 -4.526 33.746 17.701 1.00 65.93 C ATOM 185 CG ASN 26 -4.996 33.748 19.148 1.00 65.93 C ATOM 186 OD1 ASN 26 -4.633 34.627 19.928 1.00 65.93 O ATOM 187 ND2 ASN 26 -5.819 32.731 19.520 1.00 65.93 N ATOM 188 C ASN 26 -2.404 34.791 18.275 1.00 65.93 C ATOM 189 O ASN 26 -2.269 35.355 19.361 1.00 65.93 O ATOM 190 N GLU 27 -1.451 33.997 17.752 1.00 80.06 N ATOM 191 CA GLU 27 -0.285 33.713 18.533 1.00 80.06 C ATOM 192 CB GLU 27 0.728 32.838 17.779 1.00 80.06 C ATOM 193 CG GLU 27 0.201 31.442 17.453 1.00 80.06 C ATOM 194 CD GLU 27 -0.057 30.722 18.768 1.00 80.06 C ATOM 195 OE1 GLU 27 0.611 31.073 19.777 1.00 80.06 O ATOM 196 OE2 GLU 27 -0.927 29.812 18.780 1.00 80.06 O ATOM 197 C GLU 27 0.399 35.001 18.840 1.00 80.06 C ATOM 198 O GLU 27 0.609 35.340 20.002 1.00 80.06 O ATOM 199 N LEU 28 0.732 35.778 17.799 1.00191.84 N ATOM 200 CA LEU 28 1.323 37.056 18.038 1.00191.84 C ATOM 201 CB LEU 28 2.761 37.177 17.480 1.00191.84 C ATOM 202 CG LEU 28 3.520 38.502 17.749 1.00191.84 C ATOM 203 CD1 LEU 28 4.934 38.437 17.150 1.00191.84 C ATOM 204 CD2 LEU 28 2.772 39.753 17.254 1.00191.84 C ATOM 205 C LEU 28 0.437 37.984 17.284 1.00191.84 C ATOM 206 O LEU 28 0.327 37.865 16.067 1.00191.84 O ATOM 207 N ARG 29 -0.228 38.924 17.983 1.00237.13 N ATOM 208 CA ARG 29 -1.114 39.820 17.298 1.00237.13 C ATOM 209 CB ARG 29 -2.608 39.496 17.498 1.00237.13 C ATOM 210 CG ARG 29 -3.539 40.387 16.669 1.00237.13 C ATOM 211 CD ARG 29 -5.033 40.135 16.897 1.00237.13 C ATOM 212 NE ARG 29 -5.781 41.106 16.048 1.00237.13 N ATOM 213 CZ ARG 29 -7.130 41.256 16.194 1.00237.13 C ATOM 214 NH1 ARG 29 -7.804 40.504 17.112 1.00237.13 N ATOM 215 NH2 ARG 29 -7.804 42.164 15.428 1.00237.13 N ATOM 216 C ARG 29 -0.881 41.187 17.847 1.00237.13 C ATOM 217 O ARG 29 -0.186 41.356 18.847 1.00237.13 O ATOM 218 N VAL 30 -1.449 42.212 17.183 1.00 77.51 N ATOM 219 CA VAL 30 -1.279 43.548 17.661 1.00 77.51 C ATOM 220 CB VAL 30 -1.716 44.593 16.675 1.00 77.51 C ATOM 221 CG1 VAL 30 -1.572 45.978 17.330 1.00 77.51 C ATOM 222 CG2 VAL 30 -0.901 44.417 15.384 1.00 77.51 C ATOM 223 C VAL 30 -2.153 43.680 18.860 1.00 77.51 C ATOM 224 O VAL 30 -3.378 43.707 18.755 1.00 77.51 O ATOM 225 N THR 31 -1.521 43.753 20.044 1.00231.53 N ATOM 226 CA THR 31 -2.250 43.875 21.267 1.00231.53 C ATOM 227 CB THR 31 -2.541 42.562 21.930 1.00231.53 C ATOM 228 OG1 THR 31 -1.330 41.925 22.299 1.00231.53 O ATOM 229 CG2 THR 31 -3.331 41.675 20.954 1.00231.53 C ATOM 230 C THR 31 -1.383 44.653 22.195 1.00231.53 C ATOM 231 O THR 31 -0.423 45.296 21.775 1.00231.53 O ATOM 232 N GLU 32 -1.718 44.628 23.497 1.00121.08 N ATOM 233 CA GLU 32 -0.919 45.348 24.439 1.00121.08 C ATOM 234 CB GLU 32 -1.439 45.235 25.881 1.00121.08 C ATOM 235 CG GLU 32 -0.593 46.015 26.889 1.00121.08 C ATOM 236 CD GLU 32 -1.209 45.822 28.267 1.00121.08 C ATOM 237 OE1 GLU 32 -2.288 45.179 28.349 1.00121.08 O ATOM 238 OE2 GLU 32 -0.605 46.315 29.258 1.00121.08 O ATOM 239 C GLU 32 0.448 44.750 24.400 1.00121.08 C ATOM 240 O GLU 32 1.446 45.467 24.380 1.00121.08 O ATOM 241 N ARG 33 0.530 43.406 24.370 1.00234.13 N ATOM 242 CA ARG 33 1.826 42.801 24.318 1.00234.13 C ATOM 243 CB ARG 33 1.995 41.582 25.243 1.00234.13 C ATOM 244 CG ARG 33 1.000 40.445 25.014 1.00234.13 C ATOM 245 CD ARG 33 1.118 39.358 26.083 1.00234.13 C ATOM 246 NE ARG 33 0.025 38.370 25.868 1.00234.13 N ATOM 247 CZ ARG 33 -0.378 37.584 26.909 1.00234.13 C ATOM 248 NH1 ARG 33 0.206 37.724 28.134 1.00234.13 N ATOM 249 NH2 ARG 33 -1.366 36.658 26.728 1.00234.13 N ATOM 250 C ARG 33 2.092 42.409 22.903 1.00234.13 C ATOM 251 O ARG 33 1.242 41.885 22.188 1.00234.13 O ATOM 252 N PRO 34 3.287 42.727 22.501 1.00188.01 N ATOM 253 CA PRO 34 3.758 42.521 21.161 1.00188.01 C ATOM 254 CD PRO 34 4.116 43.657 23.246 1.00188.01 C ATOM 255 CB PRO 34 5.063 43.319 21.048 1.00188.01 C ATOM 256 CG PRO 34 5.458 43.633 22.502 1.00188.01 C ATOM 257 C PRO 34 3.906 41.099 20.725 1.00188.01 C ATOM 258 O PRO 34 3.849 40.860 19.520 1.00188.01 O ATOM 259 N PHE 35 4.114 40.136 21.642 1.00273.25 N ATOM 260 CA PHE 35 4.335 38.809 21.143 1.00273.25 C ATOM 261 CB PHE 35 5.824 38.512 20.919 1.00273.25 C ATOM 262 CG PHE 35 6.525 38.892 22.178 1.00273.25 C ATOM 263 CD1 PHE 35 6.484 38.085 23.291 1.00273.25 C ATOM 264 CD2 PHE 35 7.231 40.071 22.239 1.00273.25 C ATOM 265 CE1 PHE 35 7.137 38.458 24.442 1.00273.25 C ATOM 266 CE2 PHE 35 7.885 40.447 23.388 1.00273.25 C ATOM 267 CZ PHE 35 7.839 39.637 24.496 1.00273.25 C ATOM 268 C PHE 35 3.797 37.789 22.092 1.00273.25 C ATOM 269 O PHE 35 3.548 38.071 23.262 1.00273.25 O ATOM 270 N TRP 36 3.585 36.560 21.571 1.00181.11 N ATOM 271 CA TRP 36 3.116 35.477 22.383 1.00181.11 C ATOM 272 CB TRP 36 2.592 34.283 21.567 1.00181.11 C ATOM 273 CG TRP 36 1.885 33.220 22.375 1.00181.11 C ATOM 274 CD2 TRP 36 0.471 33.227 22.630 1.00181.11 C ATOM 275 CD1 TRP 36 2.381 32.104 22.981 1.00181.11 C ATOM 276 NE1 TRP 36 1.363 31.414 23.599 1.00181.11 N ATOM 277 CE2 TRP 36 0.182 32.095 23.391 1.00181.11 C ATOM 278 CE3 TRP 36 -0.508 34.105 22.259 1.00181.11 C ATOM 279 CZ2 TRP 36 -1.095 31.822 23.793 1.00181.11 C ATOM 280 CZ3 TRP 36 -1.793 33.830 22.668 1.00181.11 C ATOM 281 CH2 TRP 36 -2.081 32.710 23.420 1.00181.11 C ATOM 282 C TRP 36 4.309 35.011 23.146 1.00181.11 C ATOM 283 O TRP 36 5.396 34.868 22.587 1.00181.11 O ATOM 284 N ILE 37 4.138 34.742 24.451 1.00154.59 N ATOM 285 CA ILE 37 5.284 34.404 25.238 1.00154.59 C ATOM 286 CB ILE 37 5.399 35.226 26.493 1.00154.59 C ATOM 287 CG1 ILE 37 4.245 34.919 27.464 1.00154.59 C ATOM 288 CG2 ILE 37 5.422 36.708 26.082 1.00154.59 C ATOM 289 CD1 ILE 37 2.862 35.265 26.916 1.00154.59 C ATOM 290 C ILE 37 5.162 32.985 25.675 1.00154.59 C ATOM 291 O ILE 37 4.099 32.542 26.104 1.00154.59 O ATOM 292 N SER 38 6.262 32.221 25.542 1.00 82.73 N ATOM 293 CA SER 38 6.242 30.872 26.013 1.00 82.73 C ATOM 294 CB SER 38 7.448 30.052 25.532 1.00 82.73 C ATOM 295 OG SER 38 7.467 28.789 26.179 1.00 82.73 O ATOM 296 C SER 38 6.312 30.933 27.505 1.00 82.73 C ATOM 297 O SER 38 7.061 31.733 28.065 1.00 82.73 O ATOM 298 N SER 39 5.522 30.087 28.194 1.00106.39 N ATOM 299 CA SER 39 5.566 30.074 29.625 1.00106.39 C ATOM 300 CB SER 39 4.381 29.338 30.271 1.00106.39 C ATOM 301 OG SER 39 3.166 30.005 29.962 1.00106.39 O ATOM 302 C SER 39 6.817 29.356 30.013 1.00106.39 C ATOM 303 O SER 39 7.233 28.407 29.351 1.00106.39 O ATOM 304 N PHE 40 7.452 29.809 31.108 1.00133.18 N ATOM 305 CA PHE 40 8.679 29.238 31.582 1.00133.18 C ATOM 306 CB PHE 40 9.854 30.191 31.298 1.00133.18 C ATOM 307 CG PHE 40 11.046 29.863 32.124 1.00133.18 C ATOM 308 CD1 PHE 40 11.822 28.755 31.874 1.00133.18 C ATOM 309 CD2 PHE 40 11.400 30.713 33.147 1.00133.18 C ATOM 310 CE1 PHE 40 12.925 28.495 32.652 1.00133.18 C ATOM 311 CE2 PHE 40 12.499 30.459 33.927 1.00133.18 C ATOM 312 CZ PHE 40 13.261 29.345 33.678 1.00133.18 C ATOM 313 C PHE 40 8.552 29.038 33.061 1.00133.18 C ATOM 314 O PHE 40 8.078 29.915 33.777 1.00133.18 O ATOM 315 N ILE 41 8.984 27.863 33.557 1.00121.52 N ATOM 316 CA ILE 41 8.912 27.574 34.962 1.00121.52 C ATOM 317 CB ILE 41 9.112 26.128 35.306 1.00121.52 C ATOM 318 CG1 ILE 41 7.985 25.259 34.724 1.00121.52 C ATOM 319 CG2 ILE 41 9.246 26.037 36.834 1.00121.52 C ATOM 320 CD1 ILE 41 6.600 25.601 35.273 1.00121.52 C ATOM 321 C ILE 41 10.015 28.329 35.624 1.00121.52 C ATOM 322 O ILE 41 11.127 28.398 35.109 1.00121.52 O ATOM 323 N GLY 42 9.728 28.900 36.806 1.00 86.17 N ATOM 324 CA GLY 42 10.640 29.758 37.507 1.00 86.17 C ATOM 325 C GLY 42 11.918 29.052 37.851 1.00 86.17 C ATOM 326 O GLY 42 12.981 29.668 37.844 1.00 86.17 O ATOM 327 N ARG 43 11.863 27.750 38.179 1.00201.28 N ATOM 328 CA ARG 43 13.031 27.042 38.632 1.00201.28 C ATOM 329 CB ARG 43 12.706 25.640 39.169 1.00201.28 C ATOM 330 CG ARG 43 11.946 24.751 38.187 1.00201.28 C ATOM 331 CD ARG 43 11.365 23.510 38.865 1.00201.28 C ATOM 332 NE ARG 43 10.769 23.961 40.157 1.00201.28 N ATOM 333 CZ ARG 43 9.481 24.410 40.216 1.00201.28 C ATOM 334 NH1 ARG 43 8.690 24.381 39.105 1.00201.28 N ATOM 335 NH2 ARG 43 8.980 24.895 41.388 1.00201.28 N ATOM 336 C ARG 43 14.087 26.949 37.573 1.00201.28 C ATOM 337 O ARG 43 13.817 27.133 36.386 1.00201.28 O ATOM 338 N SER 44 15.350 26.717 38.012 1.00 88.35 N ATOM 339 CA SER 44 16.472 26.585 37.118 1.00 88.35 C ATOM 340 CB SER 44 17.231 27.902 36.879 1.00 88.35 C ATOM 341 OG SER 44 16.396 28.838 36.211 1.00 88.35 O ATOM 342 C SER 44 17.456 25.609 37.703 1.00 88.35 C ATOM 343 O SER 44 17.463 25.360 38.909 1.00 88.35 O ATOM 344 N LYS 45 18.313 25.019 36.837 1.00 95.35 N ATOM 345 CA LYS 45 19.319 24.076 37.249 1.00 95.35 C ATOM 346 CB LYS 45 18.996 22.632 36.820 1.00 95.35 C ATOM 347 CG LYS 45 19.914 21.576 37.436 1.00 95.35 C ATOM 348 CD LYS 45 19.390 20.148 37.263 1.00 95.35 C ATOM 349 CE LYS 45 20.283 19.084 37.903 1.00 95.35 C ATOM 350 NZ LYS 45 20.079 19.074 39.369 1.00 95.35 N ATOM 351 C LYS 45 20.598 24.472 36.568 1.00 95.35 C ATOM 352 O LYS 45 20.571 25.164 35.551 1.00 95.35 O TER END