####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS112_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS112_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 2 - 32 4.94 12.92 LONGEST_CONTINUOUS_SEGMENT: 31 6 - 36 4.96 13.15 LONGEST_CONTINUOUS_SEGMENT: 31 7 - 37 4.83 13.00 LCS_AVERAGE: 64.15 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 19 - 32 1.95 16.05 LONGEST_CONTINUOUS_SEGMENT: 14 20 - 33 1.91 16.20 LCS_AVERAGE: 22.00 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.77 16.34 LCS_AVERAGE: 16.94 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 8 31 2 3 3 4 9 10 11 12 16 20 25 27 30 31 33 36 36 36 37 37 LCS_GDT V 3 V 3 3 8 31 3 4 4 6 9 10 11 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT Q 4 Q 4 3 8 31 3 3 4 6 9 10 11 12 16 19 24 27 30 31 33 36 36 36 37 37 LCS_GDT G 5 G 5 4 8 31 3 3 4 6 9 10 12 14 17 20 23 27 29 31 33 36 36 36 37 37 LCS_GDT P 6 P 6 4 8 31 1 4 4 6 9 10 12 14 17 20 22 27 29 30 32 36 36 36 37 37 LCS_GDT W 7 W 7 4 8 31 1 4 4 6 9 10 13 15 17 20 24 27 30 31 33 36 36 36 37 37 LCS_GDT V 8 V 8 4 10 31 3 4 6 7 9 12 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT G 9 G 9 9 10 31 8 8 9 9 10 11 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT S 10 S 10 9 10 31 8 8 9 9 10 12 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT S 11 S 11 9 10 31 8 8 9 9 10 11 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT Y 12 Y 12 9 10 31 8 8 9 9 10 11 13 15 18 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT V 13 V 13 9 10 31 8 8 9 9 10 12 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT A 14 A 14 9 10 31 8 8 9 9 10 11 13 15 17 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT E 15 E 15 9 10 31 8 8 9 9 10 11 13 15 17 20 22 27 29 30 33 36 36 36 37 37 LCS_GDT T 16 T 16 9 10 31 8 8 9 9 10 11 13 15 17 21 25 27 30 31 33 36 36 36 37 37 LCS_GDT G 17 G 17 9 10 31 4 5 9 9 10 11 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT Q 18 Q 18 4 10 31 3 3 4 7 10 11 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT N 19 N 19 4 14 31 3 3 5 5 7 12 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT W 20 W 20 13 14 31 10 11 12 13 13 13 13 14 16 20 23 27 29 31 33 36 36 36 37 37 LCS_GDT A 21 A 21 13 14 31 10 11 12 13 13 13 13 15 17 20 22 27 29 31 33 36 36 36 37 37 LCS_GDT S 22 S 22 13 14 31 10 11 12 13 13 13 13 15 18 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT L 23 L 23 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT A 24 A 24 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT A 25 A 25 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT N 26 N 26 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT E 27 E 27 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT L 28 L 28 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT R 29 R 29 13 14 31 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT V 30 V 30 13 14 31 5 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT T 31 T 31 13 14 31 3 4 5 13 13 13 13 14 17 22 25 27 30 31 33 36 36 36 37 37 LCS_GDT E 32 E 32 13 14 31 6 11 12 13 13 13 13 14 17 21 25 27 30 31 33 36 36 36 37 37 LCS_GDT R 33 R 33 4 14 31 3 3 4 4 9 11 12 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT P 34 P 34 4 5 31 2 3 5 5 5 7 8 13 16 16 25 27 29 31 33 36 36 36 37 37 LCS_GDT F 35 F 35 4 5 31 3 4 5 5 5 8 12 15 18 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT W 36 W 36 4 5 31 3 4 6 7 8 12 12 15 19 23 25 27 30 31 33 36 36 36 37 37 LCS_GDT I 37 I 37 4 5 31 3 4 5 5 5 7 8 8 11 11 19 25 30 31 33 36 36 36 37 37 LCS_GDT S 38 S 38 4 5 29 0 4 5 5 5 7 8 8 11 11 14 19 23 26 31 32 34 35 37 37 LCS_GDT S 39 S 39 3 4 14 0 3 3 4 4 5 6 7 11 11 11 12 13 13 13 16 20 28 29 32 LCS_GDT F 40 F 40 3 4 14 0 3 3 4 4 5 6 7 11 11 11 12 13 13 13 13 14 14 14 17 LCS_GDT I 41 I 41 3 5 14 0 3 4 4 5 5 6 8 11 11 11 12 13 13 13 13 14 16 18 21 LCS_GDT G 42 G 42 3 5 14 3 3 4 4 5 5 6 7 11 11 11 12 13 13 13 13 14 14 14 17 LCS_GDT R 43 R 43 3 5 14 3 3 4 4 5 5 5 7 8 9 10 12 13 13 13 13 14 14 14 16 LCS_GDT S 44 S 44 3 5 14 3 3 4 4 5 5 6 7 8 9 10 12 13 13 13 13 14 14 14 16 LCS_GDT K 45 K 45 3 5 13 3 3 4 4 5 5 6 7 8 9 10 10 12 12 12 13 14 14 14 15 LCS_AVERAGE LCS_A: 34.37 ( 16.94 22.00 64.15 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 11 12 13 13 13 13 15 19 23 25 27 30 31 33 36 36 36 37 37 GDT PERCENT_AT 22.73 25.00 27.27 29.55 29.55 29.55 29.55 34.09 43.18 52.27 56.82 61.36 68.18 70.45 75.00 81.82 81.82 81.82 84.09 84.09 GDT RMS_LOCAL 0.33 0.40 0.53 0.77 0.77 0.77 0.77 2.69 3.33 3.71 3.89 4.07 4.51 4.64 4.85 5.24 5.24 5.24 5.50 5.50 GDT RMS_ALL_AT 16.56 16.73 16.16 16.34 16.34 16.34 16.34 16.34 12.94 13.06 13.04 12.94 12.78 12.83 12.95 12.99 12.99 12.99 12.76 12.76 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 12.926 0 0.053 0.049 14.475 0.000 0.000 - LGA V 3 V 3 8.285 0 0.632 0.773 9.795 0.000 0.000 7.391 LGA Q 4 Q 4 10.542 0 0.095 1.102 19.887 0.000 0.000 17.298 LGA G 5 G 5 9.565 0 0.225 0.225 12.923 0.000 0.000 - LGA P 6 P 6 9.226 0 0.134 0.144 11.562 0.000 0.000 10.344 LGA W 7 W 7 6.237 0 0.456 1.291 12.614 0.000 0.000 12.340 LGA V 8 V 8 3.548 0 0.653 0.718 6.983 16.364 9.610 5.221 LGA G 9 G 9 3.468 0 0.556 0.556 3.468 34.545 34.545 - LGA S 10 S 10 1.468 0 0.053 0.696 2.150 71.364 64.545 1.865 LGA S 11 S 11 2.005 0 0.049 0.616 4.866 51.364 36.364 4.866 LGA Y 12 Y 12 2.640 0 0.103 1.296 14.478 38.636 13.788 14.478 LGA V 13 V 13 2.422 0 0.040 0.105 4.205 44.545 29.610 4.119 LGA A 14 A 14 2.124 0 0.043 0.044 2.682 45.455 41.818 - LGA E 15 E 15 1.713 0 0.094 0.970 3.009 58.182 53.939 1.003 LGA T 16 T 16 0.654 0 0.099 1.164 3.491 86.364 72.987 3.491 LGA G 17 G 17 1.332 0 0.585 0.585 3.646 52.273 52.273 - LGA Q 18 Q 18 1.552 0 0.623 1.521 8.343 48.636 22.222 8.001 LGA N 19 N 19 4.531 0 0.104 0.949 7.818 10.000 5.682 4.325 LGA W 20 W 20 5.928 0 0.623 0.451 13.974 5.909 1.688 13.974 LGA A 21 A 21 3.583 0 0.073 0.068 5.169 29.091 23.273 - LGA S 22 S 22 3.531 0 0.082 0.135 5.021 15.455 10.606 4.601 LGA L 23 L 23 2.641 0 0.044 1.424 5.957 24.545 21.591 4.875 LGA A 24 A 24 4.891 0 0.049 0.067 6.975 3.182 3.636 - LGA A 25 A 25 5.959 0 0.025 0.035 9.729 1.364 1.091 - LGA N 26 N 26 9.996 0 0.048 0.109 13.126 0.000 0.000 9.974 LGA E 27 E 27 12.103 0 0.106 1.025 14.798 0.000 0.000 10.968 LGA L 28 L 28 12.151 0 0.088 0.278 13.885 0.000 0.000 7.810 LGA R 29 R 29 15.101 0 0.098 1.575 23.483 0.000 0.000 22.481 LGA V 30 V 30 12.546 0 0.605 1.006 13.668 0.000 0.000 8.798 LGA T 31 T 31 14.773 0 0.657 1.209 17.766 0.000 0.000 15.983 LGA E 32 E 32 17.068 0 0.524 1.479 23.542 0.000 0.000 23.542 LGA R 33 R 33 15.071 0 0.620 0.947 16.649 0.000 0.000 15.998 LGA P 34 P 34 11.199 0 0.231 0.304 12.824 0.000 0.000 8.351 LGA F 35 F 35 13.610 0 0.610 1.361 13.819 0.000 0.000 13.403 LGA W 36 W 36 13.939 0 0.059 1.198 19.206 0.000 0.000 17.229 LGA I 37 I 37 15.523 0 0.602 0.530 18.008 0.000 0.000 16.414 LGA S 38 S 38 20.830 0 0.659 0.807 24.295 0.000 0.000 23.162 LGA S 39 S 39 27.342 0 0.664 0.553 29.589 0.000 0.000 27.149 LGA F 40 F 40 30.302 0 0.625 0.538 31.947 0.000 0.000 29.891 LGA I 41 I 41 31.712 0 0.129 1.131 35.339 0.000 0.000 27.514 LGA G 42 G 42 37.866 0 0.697 0.697 37.866 0.000 0.000 - LGA R 43 R 43 38.218 0 0.043 1.204 44.152 0.000 0.000 42.824 LGA S 44 S 44 36.066 0 0.050 0.617 39.482 0.000 0.000 34.732 LGA K 45 K 45 37.611 0 0.037 0.676 41.644 0.000 0.000 41.644 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.260 11.234 12.414 14.483 11.347 4.312 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 2.69 42.614 36.781 0.538 LGA_LOCAL RMSD: 2.689 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 16.336 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.260 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.936092 * X + -0.092607 * Y + 0.339346 * Z + 63.710354 Y_new = -0.348389 * X + 0.110959 * Y + -0.930759 * Z + 81.645775 Z_new = 0.048542 * X + -0.989501 * Y + -0.136131 * Z + 55.012039 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.785302 -0.048561 -1.707513 [DEG: -159.5860 -2.7823 -97.8333 ] ZXZ: 0.349613 1.707351 3.092575 [DEG: 20.0314 97.8240 177.1915 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS112_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS112_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 2.69 36.781 11.26 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS112_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 -0.240 41.846 9.490 1.00 4.51 N ATOM 10 CA ALA 2 -0.810 40.612 9.011 1.00 4.03 C ATOM 11 CB ALA 2 -1.789 40.929 7.855 1.00 4.24 C ATOM 12 C ALA 2 0.215 39.577 8.577 1.00 3.30 C ATOM 13 O ALA 2 1.328 39.865 8.212 1.00 3.50 O ATOM 14 N VAL 3 -0.330 38.315 8.577 1.00 2.58 N ATOM 15 CA VAL 3 0.316 37.155 7.982 1.00 1.95 C ATOM 16 CB VAL 3 -0.789 36.072 8.146 1.00 1.32 C ATOM 17 CG1 VAL 3 -0.801 34.897 7.116 1.00 1.40 C ATOM 18 CG2 VAL 3 -0.684 35.507 9.629 1.00 1.64 C ATOM 19 C VAL 3 0.765 37.245 6.576 1.00 1.88 C ATOM 20 O VAL 3 1.816 36.715 6.135 1.00 2.03 O ATOM 21 N GLN 4 -0.035 37.998 5.826 1.00 1.82 N ATOM 22 CA GLN 4 -0.042 38.087 4.462 1.00 1.76 C ATOM 23 CB GLN 4 -0.964 37.009 3.882 1.00 1.82 C ATOM 24 CG GLN 4 -2.434 36.971 4.510 1.00 2.19 C ATOM 25 CD GLN 4 -3.203 35.804 3.966 1.00 2.56 C ATOM 26 OE1 GLN 4 -2.987 34.640 4.311 1.00 2.92 O ATOM 27 NE2 GLN 4 -4.189 36.110 3.012 1.00 2.95 N ATOM 28 C GLN 4 -0.471 39.507 4.116 1.00 1.71 C ATOM 29 O GLN 4 -1.506 40.053 4.557 1.00 1.80 O ATOM 30 N GLY 5 0.383 40.187 3.213 1.00 1.62 N ATOM 31 CA GLY 5 -0.037 41.356 2.473 1.00 1.55 C ATOM 32 C GLY 5 -0.441 40.953 1.061 1.00 1.43 C ATOM 33 O GLY 5 -1.219 39.980 0.924 1.00 1.60 O ATOM 34 N PRO 6 0.015 41.491 -0.083 1.00 1.31 N ATOM 35 CD PRO 6 0.680 42.861 -0.083 1.00 1.34 C ATOM 36 CA PRO 6 0.085 40.749 -1.376 1.00 1.30 C ATOM 37 CB PRO 6 0.432 41.920 -2.348 1.00 1.31 C ATOM 38 CG PRO 6 1.350 42.872 -1.499 1.00 1.27 C ATOM 39 C PRO 6 1.200 39.725 -1.433 1.00 1.25 C ATOM 40 O PRO 6 1.455 39.199 -2.567 1.00 1.52 O ATOM 41 N TRP 7 1.790 39.418 -0.290 1.00 1.25 N ATOM 42 CA TRP 7 2.850 38.409 -0.078 1.00 1.26 C ATOM 43 CB TRP 7 4.215 39.049 0.341 1.00 1.24 C ATOM 44 CG TRP 7 4.025 40.156 1.332 1.00 1.32 C ATOM 45 CD1 TRP 7 4.070 41.485 1.032 1.00 1.95 C ATOM 46 NE1 TRP 7 3.934 42.187 2.205 1.00 2.46 N ATOM 47 CE2 TRP 7 3.825 41.239 3.200 1.00 2.40 C ATOM 48 CD2 TRP 7 3.953 40.000 2.736 1.00 1.73 C ATOM 49 CE3 TRP 7 3.923 38.883 3.614 1.00 2.14 C ATOM 50 CZ3 TRP 7 3.705 39.111 4.964 1.00 3.03 C ATOM 51 CZ2 TRP 7 3.731 41.511 4.564 1.00 3.23 C ATOM 52 CH2 TRP 7 3.658 40.452 5.452 1.00 3.51 C ATOM 53 C TRP 7 2.344 37.488 1.059 1.00 1.30 C ATOM 54 O TRP 7 1.530 37.947 1.843 1.00 1.34 O ATOM 55 N VAL 8 2.813 36.269 1.161 1.00 1.34 N ATOM 56 CA VAL 8 2.620 35.368 2.291 1.00 1.41 C ATOM 57 CB VAL 8 1.776 34.218 1.877 1.00 1.36 C ATOM 58 CG1 VAL 8 1.308 33.438 3.107 1.00 1.48 C ATOM 59 CG2 VAL 8 0.529 34.665 1.003 1.00 1.39 C ATOM 60 C VAL 8 3.935 34.968 2.942 1.00 1.40 C ATOM 61 O VAL 8 4.870 34.504 2.196 1.00 1.37 O ATOM 62 N GLY 9 4.135 35.250 4.299 1.00 1.44 N ATOM 63 CA GLY 9 5.446 35.068 4.994 1.00 1.48 C ATOM 64 C GLY 9 5.617 33.616 5.503 1.00 1.47 C ATOM 65 O GLY 9 5.384 33.373 6.660 1.00 1.41 O ATOM 66 N SER 10 5.901 32.732 4.619 1.00 1.63 N ATOM 67 CA SER 10 5.589 31.300 4.811 1.00 1.76 C ATOM 68 CB SER 10 5.869 30.564 3.490 1.00 1.97 C ATOM 69 OG SER 10 5.391 29.184 3.511 1.00 2.13 O ATOM 70 C SER 10 6.316 30.630 5.992 1.00 1.77 C ATOM 71 O SER 10 5.782 29.747 6.660 1.00 1.89 O ATOM 72 N SER 11 7.597 31.035 6.200 1.00 1.66 N ATOM 73 CA SER 11 8.303 30.518 7.451 1.00 1.69 C ATOM 74 CB SER 11 9.831 30.740 7.393 1.00 1.68 C ATOM 75 OG SER 11 10.435 29.924 6.396 1.00 2.23 O ATOM 76 C SER 11 7.774 31.059 8.753 1.00 1.63 C ATOM 77 O SER 11 7.538 30.245 9.685 1.00 1.73 O ATOM 78 N TYR 12 7.463 32.358 8.787 1.00 1.54 N ATOM 79 CA TYR 12 6.847 33.109 9.909 1.00 1.57 C ATOM 80 CB TYR 12 6.806 34.662 9.763 1.00 1.59 C ATOM 81 CG TYR 12 8.135 35.282 9.355 1.00 1.49 C ATOM 82 CD1 TYR 12 8.190 35.850 8.100 1.00 1.72 C ATOM 83 CE1 TYR 12 9.351 36.554 7.726 1.00 1.83 C ATOM 84 CZ TYR 12 10.452 36.589 8.618 1.00 1.86 C ATOM 85 OH TYR 12 11.497 37.362 8.364 1.00 2.22 O ATOM 86 CD2 TYR 12 9.206 35.182 10.133 1.00 1.64 C ATOM 87 CE2 TYR 12 10.397 35.843 9.833 1.00 1.87 C ATOM 88 C TYR 12 5.495 32.523 10.323 1.00 1.68 C ATOM 89 O TYR 12 5.313 32.259 11.524 1.00 1.78 O ATOM 90 N VAL 13 4.643 32.114 9.306 1.00 1.68 N ATOM 91 CA VAL 13 3.424 31.468 9.580 1.00 1.84 C ATOM 92 CB VAL 13 2.657 31.423 8.273 1.00 1.83 C ATOM 93 CG1 VAL 13 1.397 30.497 8.448 1.00 2.13 C ATOM 94 CG2 VAL 13 2.222 32.865 7.980 1.00 1.88 C ATOM 95 C VAL 13 3.578 30.098 10.150 1.00 2.05 C ATOM 96 O VAL 13 2.928 29.680 11.094 1.00 2.24 O ATOM 97 N ALA 14 4.517 29.252 9.604 1.00 2.07 N ATOM 98 CA ALA 14 4.834 27.968 10.218 1.00 2.31 C ATOM 99 CB ALA 14 5.863 27.154 9.384 1.00 2.38 C ATOM 100 C ALA 14 5.336 27.995 11.650 1.00 2.36 C ATOM 101 O ALA 14 4.925 27.268 12.506 1.00 2.61 O ATOM 102 N GLU 15 6.231 28.994 11.971 1.00 2.17 N ATOM 103 CA GLU 15 6.981 29.252 13.254 1.00 2.22 C ATOM 104 CB GLU 15 7.849 30.540 13.074 1.00 1.99 C ATOM 105 CG GLU 15 8.731 30.861 14.251 1.00 1.90 C ATOM 106 CD GLU 15 8.915 32.358 14.320 1.00 1.90 C ATOM 107 OE1 GLU 15 9.004 32.999 13.242 1.00 1.97 O ATOM 108 OE2 GLU 15 8.924 32.974 15.419 1.00 2.31 O ATOM 109 C GLU 15 6.011 29.508 14.303 1.00 2.39 C ATOM 110 O GLU 15 6.043 28.886 15.402 1.00 2.57 O ATOM 111 N THR 16 5.080 30.438 14.141 1.00 2.32 N ATOM 112 CA THR 16 4.055 30.766 15.072 1.00 2.49 C ATOM 113 CB THR 16 3.448 32.136 14.847 1.00 2.28 C ATOM 114 OG1 THR 16 2.729 32.570 16.035 1.00 2.42 O ATOM 115 CG2 THR 16 2.492 32.247 13.686 1.00 2.97 C ATOM 116 C THR 16 2.992 29.660 15.067 1.00 2.70 C ATOM 117 O THR 16 2.360 29.382 16.126 1.00 2.97 O ATOM 118 N GLY 17 2.758 28.880 14.011 1.00 2.62 N ATOM 119 CA GLY 17 1.761 27.839 14.089 1.00 2.89 C ATOM 120 C GLY 17 0.590 28.316 13.272 1.00 2.70 C ATOM 121 O GLY 17 0.024 29.378 13.484 1.00 2.40 O ATOM 122 N GLN 18 0.240 27.478 12.250 1.00 2.94 N ATOM 123 CA GLN 18 -0.784 27.821 11.243 1.00 2.91 C ATOM 124 CB GLN 18 -0.758 26.797 10.155 1.00 3.33 C ATOM 125 CG GLN 18 -1.862 26.972 9.076 1.00 3.78 C ATOM 126 CD GLN 18 -1.804 28.150 8.141 1.00 4.23 C ATOM 127 OE1 GLN 18 -1.209 27.978 7.056 1.00 4.51 O ATOM 128 NE2 GLN 18 -2.436 29.271 8.528 1.00 4.56 N ATOM 129 C GLN 18 -2.243 28.108 11.745 1.00 2.68 C ATOM 130 O GLN 18 -2.849 29.051 11.352 1.00 2.43 O ATOM 131 N ASN 19 -2.924 27.303 12.608 1.00 2.81 N ATOM 132 CA ASN 19 -4.231 27.734 13.163 1.00 2.67 C ATOM 133 CB ASN 19 -4.735 26.704 14.176 1.00 2.99 C ATOM 134 CG ASN 19 -5.010 25.405 13.560 1.00 3.38 C ATOM 135 OD1 ASN 19 -5.216 25.357 12.341 1.00 3.54 O ATOM 136 ND2 ASN 19 -5.090 24.324 14.356 1.00 3.74 N ATOM 137 C ASN 19 -4.235 28.984 14.011 1.00 2.27 C ATOM 138 O ASN 19 -5.023 29.825 13.714 1.00 2.08 O ATOM 139 N TRP 20 -3.166 29.210 14.835 1.00 2.24 N ATOM 140 CA TRP 20 -2.996 30.488 15.337 1.00 1.98 C ATOM 141 CB TRP 20 -1.915 30.352 16.463 1.00 2.16 C ATOM 142 CG TRP 20 -2.009 29.057 17.297 1.00 2.63 C ATOM 143 CD1 TRP 20 -0.915 28.334 17.548 1.00 2.95 C ATOM 144 NE1 TRP 20 -1.317 27.159 18.262 1.00 3.33 N ATOM 145 CE2 TRP 20 -2.631 27.209 18.613 1.00 3.34 C ATOM 146 CD2 TRP 20 -3.123 28.418 18.007 1.00 2.90 C ATOM 147 CE3 TRP 20 -4.469 28.820 18.218 1.00 2.87 C ATOM 148 CZ3 TRP 20 -5.174 28.086 19.132 1.00 3.31 C ATOM 149 CZ2 TRP 20 -3.350 26.477 19.478 1.00 3.79 C ATOM 150 CH2 TRP 20 -4.648 26.895 19.697 1.00 3.76 C ATOM 151 C TRP 20 -2.798 31.647 14.296 1.00 1.62 C ATOM 152 O TRP 20 -3.425 32.696 14.452 1.00 1.50 O ATOM 153 N ALA 21 -1.947 31.465 13.327 1.00 1.57 N ATOM 154 CA ALA 21 -1.731 32.421 12.181 1.00 1.34 C ATOM 155 CB ALA 21 -0.809 31.835 11.139 1.00 1.53 C ATOM 156 C ALA 21 -3.110 32.748 11.427 1.00 1.33 C ATOM 157 O ALA 21 -3.385 33.925 11.069 1.00 1.20 O ATOM 158 N SER 22 -3.978 31.730 11.081 1.00 1.66 N ATOM 159 CA SER 22 -5.305 31.934 10.642 1.00 1.78 C ATOM 160 CB SER 22 -5.975 30.613 10.071 1.00 2.23 C ATOM 161 OG SER 22 -5.927 29.484 10.930 1.00 2.38 O ATOM 162 C SER 22 -6.337 32.596 11.550 1.00 1.63 C ATOM 163 O SER 22 -6.985 33.529 11.119 1.00 1.60 O ATOM 164 N LEU 23 -6.340 32.271 12.878 1.00 1.61 N ATOM 165 CA LEU 23 -7.127 33.052 13.808 1.00 1.51 C ATOM 166 CB LEU 23 -6.840 32.472 15.181 1.00 1.62 C ATOM 167 CG LEU 23 -7.633 33.129 16.350 1.00 1.60 C ATOM 168 CD1 LEU 23 -9.060 32.807 16.397 1.00 1.67 C ATOM 169 CD2 LEU 23 -6.949 32.772 17.711 1.00 1.90 C ATOM 170 C LEU 23 -6.761 34.507 13.805 1.00 1.30 C ATOM 171 O LEU 23 -7.578 35.412 13.811 1.00 1.29 O ATOM 172 N ALA 24 -5.398 34.834 13.795 1.00 1.23 N ATOM 173 CA ALA 24 -4.950 36.216 13.615 1.00 1.12 C ATOM 174 CB ALA 24 -3.455 36.136 13.850 1.00 1.20 C ATOM 175 C ALA 24 -5.304 36.865 12.266 1.00 1.11 C ATOM 176 O ALA 24 -5.613 38.056 12.165 1.00 1.20 O ATOM 177 N ALA 25 -5.313 36.071 11.127 1.00 1.18 N ATOM 178 CA ALA 25 -5.738 36.520 9.862 1.00 1.29 C ATOM 179 CB ALA 25 -5.393 35.436 8.738 1.00 1.42 C ATOM 180 C ALA 25 -7.182 36.891 9.827 1.00 1.42 C ATOM 181 O ALA 25 -7.599 37.942 9.317 1.00 1.57 O ATOM 182 N ASN 26 -8.066 36.020 10.418 1.00 1.48 N ATOM 183 CA ASN 26 -9.493 36.205 10.593 1.00 1.63 C ATOM 184 CB ASN 26 -10.119 35.042 11.400 1.00 1.77 C ATOM 185 CG ASN 26 -10.122 33.816 10.374 1.00 2.02 C ATOM 186 OD1 ASN 26 -9.653 33.944 9.202 1.00 2.08 O ATOM 187 ND2 ASN 26 -10.479 32.635 10.871 1.00 2.30 N ATOM 188 C ASN 26 -9.772 37.575 11.328 1.00 1.60 C ATOM 189 O ASN 26 -10.622 38.383 11.034 1.00 1.75 O ATOM 190 N GLU 27 -8.897 37.893 12.363 1.00 1.40 N ATOM 191 CA GLU 27 -9.064 39.112 13.163 1.00 1.39 C ATOM 192 CB GLU 27 -8.329 38.804 14.605 1.00 1.22 C ATOM 193 CG GLU 27 -8.836 39.539 15.877 1.00 1.61 C ATOM 194 CD GLU 27 -7.992 39.194 17.114 1.00 1.39 C ATOM 195 OE1 GLU 27 -6.749 39.361 17.158 1.00 1.55 O ATOM 196 OE2 GLU 27 -8.600 38.627 18.007 1.00 1.72 O ATOM 197 C GLU 27 -8.587 40.463 12.683 1.00 1.53 C ATOM 198 O GLU 27 -9.342 41.413 12.972 1.00 1.70 O ATOM 199 N LEU 28 -7.596 40.490 11.805 1.00 1.54 N ATOM 200 CA LEU 28 -7.122 41.636 11.030 1.00 1.72 C ATOM 201 CB LEU 28 -5.590 41.593 10.811 1.00 1.76 C ATOM 202 CG LEU 28 -4.777 41.964 12.060 1.00 1.59 C ATOM 203 CD1 LEU 28 -3.356 41.414 12.017 1.00 1.85 C ATOM 204 CD2 LEU 28 -4.860 43.517 12.333 1.00 2.21 C ATOM 205 C LEU 28 -7.829 41.809 9.772 1.00 1.96 C ATOM 206 O LEU 28 -7.682 42.843 9.096 1.00 2.21 O ATOM 207 N ARG 29 -8.698 40.879 9.415 1.00 1.95 N ATOM 208 CA ARG 29 -9.752 40.992 8.435 1.00 2.21 C ATOM 209 CB ARG 29 -10.607 42.249 8.585 1.00 2.49 C ATOM 210 CG ARG 29 -11.263 42.513 9.990 1.00 2.64 C ATOM 211 CD ARG 29 -12.160 41.481 10.625 1.00 2.34 C ATOM 212 NE ARG 29 -13.415 41.466 9.801 1.00 2.97 N ATOM 213 CZ ARG 29 -14.598 41.955 10.270 1.00 3.31 C ATOM 214 NH1 ARG 29 -15.611 41.582 9.484 1.00 4.21 N ATOM 215 NH2 ARG 29 -14.851 42.666 11.313 1.00 3.04 N ATOM 216 C ARG 29 -9.101 40.719 7.080 1.00 2.25 C ATOM 217 O ARG 29 -9.710 41.004 6.037 1.00 2.51 O ATOM 218 N VAL 30 -7.887 40.093 7.038 1.00 2.03 N ATOM 219 CA VAL 30 -7.231 39.991 5.773 1.00 2.06 C ATOM 220 CB VAL 30 -5.676 40.098 5.831 1.00 1.96 C ATOM 221 CG1 VAL 30 -5.424 41.475 6.376 1.00 1.99 C ATOM 222 CG2 VAL 30 -5.112 38.961 6.712 1.00 1.93 C ATOM 223 C VAL 30 -7.656 38.731 5.025 1.00 2.19 C ATOM 224 O VAL 30 -7.417 38.584 3.834 1.00 2.61 O ATOM 225 N THR 31 -8.195 37.753 5.743 1.00 1.97 N ATOM 226 CA THR 31 -8.357 36.339 5.236 1.00 2.09 C ATOM 227 CB THR 31 -8.946 35.425 6.270 1.00 2.24 C ATOM 228 OG1 THR 31 -8.006 34.979 7.183 1.00 2.69 O ATOM 229 CG2 THR 31 -9.770 34.215 5.807 1.00 2.41 C ATOM 230 C THR 31 -8.914 36.223 3.759 1.00 2.05 C ATOM 231 O THR 31 -9.873 36.938 3.384 1.00 2.69 O ATOM 232 N GLU 32 -8.292 35.281 3.009 1.00 1.67 N ATOM 233 CA GLU 32 -8.541 35.083 1.535 1.00 1.86 C ATOM 234 CB GLU 32 -9.741 34.092 1.354 1.00 2.57 C ATOM 235 CG GLU 32 -9.378 32.716 1.974 1.00 2.81 C ATOM 236 CD GLU 32 -10.331 31.677 1.482 1.00 3.80 C ATOM 237 OE1 GLU 32 -10.153 30.545 1.955 1.00 4.34 O ATOM 238 OE2 GLU 32 -11.185 31.985 0.627 1.00 4.38 O ATOM 239 C GLU 32 -8.653 36.409 0.643 1.00 2.19 C ATOM 240 O GLU 32 -7.654 36.700 -0.034 1.00 2.48 O ATOM 241 N ARG 33 -9.861 36.829 0.561 1.00 2.39 N ATOM 242 CA ARG 33 -10.382 37.835 -0.420 1.00 2.98 C ATOM 243 CB ARG 33 -11.900 38.281 -0.126 1.00 3.41 C ATOM 244 CG ARG 33 -13.044 37.268 -0.608 1.00 3.79 C ATOM 245 CD ARG 33 -13.045 35.951 0.023 1.00 3.50 C ATOM 246 NE ARG 33 -13.335 36.159 1.478 1.00 3.74 N ATOM 247 CZ ARG 33 -13.277 35.241 2.390 1.00 3.67 C ATOM 248 NH1 ARG 33 -13.138 35.670 3.618 1.00 4.05 N ATOM 249 NH2 ARG 33 -13.395 33.986 2.230 1.00 3.61 N ATOM 250 C ARG 33 -9.431 39.043 -0.798 1.00 2.98 C ATOM 251 O ARG 33 -9.143 39.280 -1.991 1.00 3.03 O ATOM 252 N PRO 34 -8.810 39.751 0.174 1.00 3.11 N ATOM 253 CD PRO 34 -9.503 40.040 1.463 1.00 3.21 C ATOM 254 CA PRO 34 -7.839 40.797 -0.154 1.00 3.22 C ATOM 255 CB PRO 34 -7.606 41.313 1.237 1.00 3.29 C ATOM 256 CG PRO 34 -8.977 41.358 1.916 1.00 3.52 C ATOM 257 C PRO 34 -6.564 40.319 -0.832 1.00 3.38 C ATOM 258 O PRO 34 -5.757 39.679 -0.171 1.00 3.50 O ATOM 259 N PHE 35 -6.424 40.466 -2.223 1.00 3.47 N ATOM 260 CA PHE 35 -5.314 39.881 -2.949 1.00 3.74 C ATOM 261 CB PHE 35 -3.888 40.233 -2.386 1.00 4.13 C ATOM 262 CG PHE 35 -3.768 41.715 -2.008 1.00 4.66 C ATOM 263 CD1 PHE 35 -3.236 42.012 -0.731 1.00 4.61 C ATOM 264 CE1 PHE 35 -2.990 43.351 -0.382 1.00 5.11 C ATOM 265 CZ PHE 35 -3.361 44.408 -1.189 1.00 5.72 C ATOM 266 CD2 PHE 35 -3.983 42.774 -2.880 1.00 5.27 C ATOM 267 CE2 PHE 35 -3.787 44.139 -2.472 1.00 5.81 C ATOM 268 C PHE 35 -5.484 38.397 -3.291 1.00 3.39 C ATOM 269 O PHE 35 -4.491 37.732 -3.539 1.00 3.30 O ATOM 270 N TRP 36 -6.731 37.855 -3.205 1.00 3.40 N ATOM 271 CA TRP 36 -7.049 36.514 -3.720 1.00 3.20 C ATOM 272 CB TRP 36 -8.510 36.164 -3.501 1.00 3.45 C ATOM 273 CG TRP 36 -9.016 34.910 -4.120 1.00 3.49 C ATOM 274 CD1 TRP 36 -9.864 34.740 -5.221 1.00 3.87 C ATOM 275 NE1 TRP 36 -9.982 33.464 -5.525 1.00 3.91 N ATOM 276 CE2 TRP 36 -9.151 32.657 -4.774 1.00 3.65 C ATOM 277 CD2 TRP 36 -8.594 33.555 -3.866 1.00 3.34 C ATOM 278 CE3 TRP 36 -7.557 33.023 -2.932 1.00 3.22 C ATOM 279 CZ3 TRP 36 -7.299 31.613 -2.932 1.00 3.52 C ATOM 280 CZ2 TRP 36 -8.772 31.343 -4.835 1.00 3.85 C ATOM 281 CH2 TRP 36 -7.803 30.870 -3.958 1.00 3.85 C ATOM 282 C TRP 36 -6.698 36.457 -5.174 1.00 3.26 C ATOM 283 O TRP 36 -7.167 37.222 -6.065 1.00 3.69 O ATOM 284 N ILE 37 -5.743 35.526 -5.388 1.00 3.02 N ATOM 285 CA ILE 37 -5.178 35.285 -6.741 1.00 3.03 C ATOM 286 CB ILE 37 -3.645 35.535 -6.685 1.00 3.41 C ATOM 287 CG2 ILE 37 -2.907 34.583 -5.678 1.00 3.73 C ATOM 288 CG1 ILE 37 -3.015 35.364 -8.127 1.00 3.15 C ATOM 289 CD1 ILE 37 -3.633 36.152 -9.254 1.00 3.87 C ATOM 290 C ILE 37 -5.681 33.993 -7.384 1.00 2.75 C ATOM 291 O ILE 37 -5.497 32.879 -6.880 1.00 2.83 O ATOM 292 N SER 38 -6.321 34.078 -8.609 1.00 2.80 N ATOM 293 CA SER 38 -6.832 32.921 -9.246 1.00 2.80 C ATOM 294 CB SER 38 -8.222 32.455 -8.714 1.00 3.52 C ATOM 295 OG SER 38 -8.864 31.481 -9.531 1.00 3.56 O ATOM 296 C SER 38 -6.865 33.118 -10.747 1.00 2.67 C ATOM 297 O SER 38 -7.192 34.181 -11.264 1.00 3.16 O ATOM 298 N SER 39 -6.664 32.048 -11.452 1.00 2.40 N ATOM 299 CA SER 39 -6.607 31.980 -12.900 1.00 2.39 C ATOM 300 CB SER 39 -5.350 32.643 -13.570 1.00 2.38 C ATOM 301 OG SER 39 -4.102 31.991 -13.123 1.00 2.58 O ATOM 302 C SER 39 -6.733 30.566 -13.320 1.00 2.38 C ATOM 303 O SER 39 -6.149 29.622 -12.752 1.00 2.42 O ATOM 304 N PHE 40 -7.543 30.303 -14.345 1.00 2.57 N ATOM 305 CA PHE 40 -7.728 28.943 -14.914 1.00 2.75 C ATOM 306 CB PHE 40 -8.771 28.995 -16.104 1.00 3.10 C ATOM 307 CG PHE 40 -10.250 29.397 -15.779 1.00 3.46 C ATOM 308 CD1 PHE 40 -10.767 29.417 -14.486 1.00 3.86 C ATOM 309 CE1 PHE 40 -12.116 29.859 -14.259 1.00 4.31 C ATOM 310 CZ PHE 40 -12.939 30.133 -15.395 1.00 4.49 C ATOM 311 CD2 PHE 40 -11.084 29.644 -16.907 1.00 3.74 C ATOM 312 CE2 PHE 40 -12.409 29.965 -16.676 1.00 4.27 C ATOM 313 C PHE 40 -6.511 28.229 -15.513 1.00 2.68 C ATOM 314 O PHE 40 -5.667 28.886 -16.144 1.00 2.69 O ATOM 315 N ILE 41 -6.378 26.919 -15.338 1.00 2.91 N ATOM 316 CA ILE 41 -5.212 26.169 -15.754 1.00 3.12 C ATOM 317 CB ILE 41 -4.101 26.289 -14.682 1.00 3.70 C ATOM 318 CG2 ILE 41 -4.519 25.532 -13.343 1.00 4.72 C ATOM 319 CG1 ILE 41 -2.723 25.770 -15.122 1.00 3.50 C ATOM 320 CD1 ILE 41 -1.931 26.872 -15.831 1.00 3.65 C ATOM 321 C ILE 41 -5.602 24.707 -16.053 1.00 3.35 C ATOM 322 O ILE 41 -6.568 24.246 -15.529 1.00 3.69 O ATOM 323 N GLY 42 -4.953 23.982 -16.973 1.00 3.34 N ATOM 324 CA GLY 42 -5.082 22.512 -17.237 1.00 3.69 C ATOM 325 C GLY 42 -4.356 21.687 -16.175 1.00 4.07 C ATOM 326 O GLY 42 -3.598 22.201 -15.380 1.00 4.45 O ATOM 327 N ARG 43 -4.580 20.332 -16.215 1.00 4.21 N ATOM 328 CA ARG 43 -3.997 19.349 -15.308 1.00 4.61 C ATOM 329 CB ARG 43 -4.509 17.893 -15.444 1.00 5.28 C ATOM 330 CG ARG 43 -6.074 17.694 -15.340 1.00 5.66 C ATOM 331 CD ARG 43 -6.704 18.280 -14.013 1.00 6.37 C ATOM 332 NE ARG 43 -8.101 17.728 -14.015 1.00 6.73 N ATOM 333 CZ ARG 43 -9.041 18.123 -14.873 1.00 6.66 C ATOM 334 NH1 ARG 43 -9.970 17.249 -15.177 1.00 6.92 N ATOM 335 NH2 ARG 43 -9.177 19.309 -15.384 1.00 6.54 N ATOM 336 C ARG 43 -2.429 19.501 -15.307 1.00 4.28 C ATOM 337 O ARG 43 -1.747 19.980 -16.216 1.00 4.04 O ATOM 338 N SER 44 -1.807 19.053 -14.142 1.00 4.36 N ATOM 339 CA SER 44 -0.448 19.266 -13.608 1.00 4.06 C ATOM 340 CB SER 44 -0.334 18.608 -12.207 1.00 4.25 C ATOM 341 OG SER 44 0.903 19.070 -11.614 1.00 4.10 O ATOM 342 C SER 44 0.578 18.733 -14.532 1.00 3.70 C ATOM 343 O SER 44 0.401 17.726 -15.286 1.00 3.78 O ATOM 344 N LYS 45 1.645 19.519 -14.675 1.00 3.37 N ATOM 345 CA LYS 45 2.813 19.311 -15.485 1.00 3.04 C ATOM 346 CB LYS 45 2.475 18.972 -17.018 1.00 3.23 C ATOM 347 CG LYS 45 1.605 19.940 -17.798 1.00 3.18 C ATOM 348 CD LYS 45 1.766 19.665 -19.339 1.00 3.39 C ATOM 349 CE LYS 45 1.005 20.596 -20.326 1.00 3.49 C ATOM 350 NZ LYS 45 1.323 20.076 -21.637 1.00 3.83 N ATOM 351 C LYS 45 3.732 20.558 -15.401 1.00 2.53 C ATOM 352 O LYS 45 3.268 21.694 -15.362 1.00 2.48 O TER 1817 LEU 249 END