####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS112_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS112_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 5 - 32 4.99 15.46 LONGEST_CONTINUOUS_SEGMENT: 28 6 - 33 4.99 15.45 LONGEST_CONTINUOUS_SEGMENT: 28 7 - 34 4.87 15.54 LONGEST_CONTINUOUS_SEGMENT: 28 8 - 35 4.86 15.39 LCS_AVERAGE: 55.48 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 15 19 - 33 1.96 19.16 LCS_AVERAGE: 24.12 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.97 17.63 LONGEST_CONTINUOUS_SEGMENT: 10 21 - 30 1.00 18.55 LCS_AVERAGE: 15.24 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 17 4 4 5 6 9 10 10 10 11 12 12 14 15 16 16 17 19 22 23 23 LCS_GDT V 3 V 3 4 8 24 4 4 7 8 9 10 10 10 11 12 14 21 23 26 28 29 32 33 34 34 LCS_GDT Q 4 Q 4 4 8 27 4 4 7 8 9 10 10 10 11 12 19 21 23 26 28 29 30 31 34 34 LCS_GDT G 5 G 5 4 8 28 4 4 7 8 9 10 10 12 14 17 19 22 23 26 28 29 32 33 34 34 LCS_GDT P 6 P 6 4 8 28 2 4 7 8 9 10 11 12 14 15 19 22 23 26 28 29 32 33 34 34 LCS_GDT W 7 W 7 4 8 28 2 4 7 8 9 10 10 12 14 17 19 22 24 26 28 29 32 33 34 34 LCS_GDT V 8 V 8 4 10 28 3 4 7 8 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT G 9 G 9 9 10 28 5 8 9 9 9 10 12 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT S 10 S 10 9 10 28 3 8 9 9 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT S 11 S 11 9 10 28 5 8 9 9 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT Y 12 Y 12 9 10 28 5 8 9 9 9 11 13 13 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT V 13 V 13 9 10 28 5 8 9 9 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT A 14 A 14 9 10 28 5 8 9 9 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT E 15 E 15 9 10 28 5 8 9 9 9 11 13 13 15 16 19 22 26 26 28 28 32 33 34 34 LCS_GDT T 16 T 16 9 10 28 5 8 9 9 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT G 17 G 17 9 10 28 3 6 9 9 9 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT Q 18 Q 18 4 10 28 3 3 4 6 8 11 13 14 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT N 19 N 19 4 15 28 3 3 9 11 13 13 15 15 16 19 22 25 26 26 28 29 32 33 34 34 LCS_GDT W 20 W 20 10 15 28 3 6 8 10 13 13 15 15 15 17 18 21 23 25 28 29 30 33 34 34 LCS_GDT A 21 A 21 10 15 28 6 9 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT S 22 S 22 10 15 28 5 9 9 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT L 23 L 23 10 15 28 5 9 9 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT A 24 A 24 10 15 28 5 9 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT A 25 A 25 10 15 28 6 9 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT N 26 N 26 10 15 28 6 9 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT E 27 E 27 10 15 28 6 9 10 11 13 13 15 15 17 19 23 25 26 26 28 29 32 33 34 34 LCS_GDT L 28 L 28 10 15 28 6 9 10 11 13 13 15 15 17 19 23 25 26 26 28 29 32 33 34 34 LCS_GDT R 29 R 29 10 15 28 6 9 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT V 30 V 30 10 15 28 3 8 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT T 31 T 31 9 15 28 3 6 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT E 32 E 32 9 15 28 3 5 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT R 33 R 33 4 15 28 3 4 5 8 12 12 15 15 17 20 23 25 26 26 28 29 32 33 34 34 LCS_GDT P 34 P 34 4 11 28 3 4 4 6 7 9 11 14 17 18 19 25 26 26 28 29 32 33 34 34 LCS_GDT F 35 F 35 4 6 28 3 4 4 5 6 6 6 7 9 14 15 20 21 25 28 29 32 33 34 34 LCS_GDT W 36 W 36 4 6 21 3 4 4 5 6 6 6 9 10 12 15 20 21 26 28 29 32 33 34 34 LCS_GDT I 37 I 37 4 6 13 3 4 4 5 6 6 8 9 10 10 12 12 12 12 13 14 18 21 25 28 LCS_GDT S 38 S 38 3 6 13 0 3 3 5 6 6 6 9 10 10 12 12 12 12 13 13 16 19 22 27 LCS_GDT S 39 S 39 3 7 13 0 3 3 4 5 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_GDT F 40 F 40 4 7 13 3 3 4 5 6 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_GDT I 41 I 41 4 7 13 3 3 4 5 6 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_GDT G 42 G 42 4 7 13 4 4 4 5 6 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_GDT R 43 R 43 4 7 13 4 4 4 5 6 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_GDT S 44 S 44 4 7 13 4 4 4 5 6 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_GDT K 45 K 45 4 7 13 4 4 4 5 6 7 8 9 10 10 12 12 12 12 13 13 13 13 13 14 LCS_AVERAGE LCS_A: 31.61 ( 15.24 24.12 55.48 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 10 11 13 13 15 15 17 20 23 25 26 26 28 29 32 33 34 34 GDT PERCENT_AT 13.64 20.45 22.73 25.00 29.55 29.55 34.09 34.09 38.64 45.45 52.27 56.82 59.09 59.09 63.64 65.91 72.73 75.00 77.27 77.27 GDT RMS_LOCAL 0.29 0.72 0.95 1.03 1.40 1.40 1.96 1.96 3.24 3.74 4.07 4.31 4.43 4.43 4.93 5.15 5.59 5.73 5.92 5.92 GDT RMS_ALL_AT 18.62 17.87 19.24 19.21 19.14 19.14 19.16 19.16 15.76 15.10 15.37 15.55 15.58 15.58 15.21 15.11 15.17 15.13 15.00 15.00 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 20.072 0 0.672 0.622 21.293 0.000 0.000 - LGA V 3 V 3 14.365 0 0.088 0.127 15.941 0.000 0.000 10.036 LGA Q 4 Q 4 17.394 0 0.094 1.294 24.769 0.000 0.000 24.769 LGA G 5 G 5 14.737 0 0.146 0.146 18.142 0.000 0.000 - LGA P 6 P 6 15.265 0 0.050 0.261 16.890 0.000 0.000 16.890 LGA W 7 W 7 14.597 0 0.385 1.213 18.049 0.000 0.000 18.049 LGA V 8 V 8 12.387 0 0.639 0.583 13.946 0.000 0.000 11.938 LGA G 9 G 9 11.152 0 0.535 0.535 12.336 0.000 0.000 - LGA S 10 S 10 15.935 0 0.107 0.648 19.077 0.000 0.000 19.077 LGA S 11 S 11 16.678 0 0.163 0.683 18.564 0.000 0.000 18.564 LGA Y 12 Y 12 12.620 0 0.062 0.735 13.446 0.000 0.000 9.259 LGA V 13 V 13 11.184 0 0.085 0.565 12.963 0.000 0.000 12.963 LGA A 14 A 14 16.203 0 0.062 0.057 18.175 0.000 0.000 - LGA E 15 E 15 16.712 0 0.056 1.284 21.742 0.000 0.000 21.742 LGA T 16 T 16 12.659 0 0.197 0.245 13.669 0.000 0.000 9.541 LGA G 17 G 17 11.364 0 0.677 0.677 11.555 0.000 0.000 - LGA Q 18 Q 18 7.878 0 0.610 1.131 14.441 0.000 0.000 10.773 LGA N 19 N 19 2.401 0 0.034 0.863 4.523 33.182 24.545 4.001 LGA W 20 W 20 3.390 0 0.655 0.461 13.819 33.636 9.610 13.819 LGA A 21 A 21 0.992 0 0.079 0.074 2.203 70.000 63.636 - LGA S 22 S 22 2.703 0 0.091 0.131 3.870 35.455 27.273 3.870 LGA L 23 L 23 2.401 0 0.047 1.442 7.573 48.182 26.364 5.872 LGA A 24 A 24 0.770 0 0.028 0.031 1.204 82.273 82.182 - LGA A 25 A 25 1.055 0 0.032 0.071 1.743 69.545 65.818 - LGA N 26 N 26 0.990 0 0.029 0.084 2.129 81.818 66.591 1.971 LGA E 27 E 27 0.306 0 0.085 0.723 2.391 95.455 70.505 2.391 LGA L 28 L 28 0.404 0 0.204 1.440 4.433 95.455 64.318 3.035 LGA R 29 R 29 0.786 0 0.068 1.266 6.990 86.364 44.628 6.990 LGA V 30 V 30 0.825 0 0.095 0.086 2.279 70.000 58.182 2.098 LGA T 31 T 31 1.815 0 0.713 1.385 5.143 59.091 38.961 5.143 LGA E 32 E 32 1.438 0 0.030 1.164 4.711 44.091 31.515 4.711 LGA R 33 R 33 4.061 0 0.066 1.101 9.617 7.727 3.140 9.617 LGA P 34 P 34 6.996 0 0.099 0.402 7.932 0.455 3.117 4.755 LGA F 35 F 35 12.067 0 0.230 1.409 17.736 0.000 0.000 17.736 LGA W 36 W 36 14.249 0 0.158 1.120 18.117 0.000 0.000 8.836 LGA I 37 I 37 21.678 0 0.633 1.278 25.908 0.000 0.000 25.908 LGA S 38 S 38 24.359 0 0.564 0.720 27.642 0.000 0.000 20.962 LGA S 39 S 39 26.787 0 0.651 0.814 28.878 0.000 0.000 25.520 LGA F 40 F 40 33.377 0 0.626 0.764 37.109 0.000 0.000 30.647 LGA I 41 I 41 37.419 0 0.030 0.178 38.992 0.000 0.000 35.847 LGA G 42 G 42 42.284 0 0.634 0.634 43.413 0.000 0.000 - LGA R 43 R 43 43.570 0 0.155 0.735 46.496 0.000 0.000 46.234 LGA S 44 S 44 44.300 0 0.146 0.679 45.037 0.000 0.000 43.313 LGA K 45 K 45 46.802 0 0.092 0.841 55.609 0.000 0.000 55.609 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 12.839 12.788 14.195 20.744 15.463 4.727 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 15 1.96 36.364 34.380 0.729 LGA_LOCAL RMSD: 1.956 Number of atoms: 15 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 19.160 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 12.839 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.849804 * X + -0.235368 * Y + -0.471631 * Z + 87.731842 Y_new = 0.150031 * X + 0.749746 * Y + -0.644493 * Z + 14.518881 Z_new = 0.505297 * X + -0.618452 * Y + -0.601825 * Z + 24.809937 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.966846 -0.529726 -2.342570 [DEG: 169.9878 -30.3511 -134.2193 ] ZXZ: -0.631742 2.216580 2.456550 [DEG: -36.1961 127.0007 140.7500 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS112_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS112_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 15 1.96 34.380 12.84 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS112_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 -8.757 37.961 7.842 1.00 4.51 N ATOM 10 CA ALA 2 -9.013 38.144 9.277 1.00 4.03 C ATOM 11 CB ALA 2 -9.160 36.777 9.891 1.00 4.24 C ATOM 12 C ALA 2 -7.986 38.946 9.955 1.00 3.30 C ATOM 13 O ALA 2 -8.245 39.476 11.004 1.00 3.50 O ATOM 14 N VAL 3 -6.804 39.112 9.400 1.00 2.58 N ATOM 15 CA VAL 3 -5.698 40.005 9.787 1.00 1.95 C ATOM 16 CB VAL 3 -4.240 39.546 9.467 1.00 1.32 C ATOM 17 CG1 VAL 3 -3.116 40.615 9.753 1.00 1.40 C ATOM 18 CG2 VAL 3 -4.018 38.186 10.402 1.00 1.64 C ATOM 19 C VAL 3 -5.956 41.296 9.089 1.00 1.88 C ATOM 20 O VAL 3 -6.080 41.180 7.847 1.00 2.03 O ATOM 21 N GLN 4 -6.054 42.404 9.823 1.00 1.82 N ATOM 22 CA GLN 4 -6.129 43.649 9.129 1.00 1.76 C ATOM 23 CB GLN 4 -7.445 44.331 9.681 1.00 1.82 C ATOM 24 CG GLN 4 -7.786 45.783 9.290 1.00 2.19 C ATOM 25 CD GLN 4 -7.927 45.803 7.800 1.00 2.56 C ATOM 26 OE1 GLN 4 -8.807 45.171 7.240 1.00 2.92 O ATOM 27 NE2 GLN 4 -6.999 46.506 7.135 1.00 2.95 N ATOM 28 C GLN 4 -4.900 44.393 9.530 1.00 1.71 C ATOM 29 O GLN 4 -4.594 44.627 10.668 1.00 1.80 O ATOM 30 N GLY 5 -4.075 44.808 8.539 1.00 1.62 N ATOM 31 CA GLY 5 -2.897 45.681 8.875 1.00 1.55 C ATOM 32 C GLY 5 -2.911 46.804 7.865 1.00 1.43 C ATOM 33 O GLY 5 -3.944 47.138 7.353 1.00 1.60 O ATOM 34 N PRO 6 -1.814 47.360 7.507 1.00 1.31 N ATOM 35 CD PRO 6 -0.461 47.159 8.041 1.00 1.34 C ATOM 36 CA PRO 6 -1.681 48.184 6.337 1.00 1.30 C ATOM 37 CB PRO 6 -0.380 48.955 6.437 1.00 1.31 C ATOM 38 CG PRO 6 0.307 48.445 7.724 1.00 1.27 C ATOM 39 C PRO 6 -1.903 47.568 4.979 1.00 1.25 C ATOM 40 O PRO 6 -2.115 48.338 4.037 1.00 1.52 O ATOM 41 N TRP 7 -1.794 46.242 4.883 1.00 1.25 N ATOM 42 CA TRP 7 -2.067 45.557 3.638 1.00 1.26 C ATOM 43 CB TRP 7 -0.732 45.014 2.957 1.00 1.24 C ATOM 44 CG TRP 7 0.203 46.098 2.525 1.00 1.32 C ATOM 45 CD1 TRP 7 -0.001 46.793 1.343 1.00 1.95 C ATOM 46 NE1 TRP 7 0.847 47.868 1.322 1.00 2.46 N ATOM 47 CE2 TRP 7 1.696 47.889 2.446 1.00 2.40 C ATOM 48 CD2 TRP 7 1.317 46.764 3.232 1.00 1.73 C ATOM 49 CE3 TRP 7 2.011 46.547 4.483 1.00 2.14 C ATOM 50 CZ3 TRP 7 2.940 47.448 4.867 1.00 3.03 C ATOM 51 CZ2 TRP 7 2.676 48.725 2.876 1.00 3.23 C ATOM 52 CH2 TRP 7 3.275 48.544 4.095 1.00 3.51 C ATOM 53 C TRP 7 -2.945 44.353 3.904 1.00 1.30 C ATOM 54 O TRP 7 -2.785 43.664 4.932 1.00 1.34 O ATOM 55 N VAL 8 -3.940 44.059 2.971 1.00 1.34 N ATOM 56 CA VAL 8 -4.838 42.857 3.085 1.00 1.41 C ATOM 57 CB VAL 8 -6.202 43.266 3.599 1.00 1.36 C ATOM 58 CG1 VAL 8 -7.131 42.117 3.465 1.00 1.48 C ATOM 59 CG2 VAL 8 -6.033 43.785 5.054 1.00 1.39 C ATOM 60 C VAL 8 -4.929 42.168 1.751 1.00 1.40 C ATOM 61 O VAL 8 -5.327 42.775 0.763 1.00 1.37 O ATOM 62 N GLY 9 -4.600 40.857 1.783 1.00 1.44 N ATOM 63 CA GLY 9 -4.524 40.105 0.551 1.00 1.48 C ATOM 64 C GLY 9 -5.301 38.796 0.602 1.00 1.47 C ATOM 65 O GLY 9 -4.886 37.763 1.133 1.00 1.41 O ATOM 66 N SER 10 -6.548 38.814 0.064 1.00 1.63 N ATOM 67 CA SER 10 -7.616 37.827 0.163 1.00 1.76 C ATOM 68 CB SER 10 -8.965 38.436 -0.445 1.00 1.97 C ATOM 69 OG SER 10 -10.164 37.650 -0.408 1.00 2.13 O ATOM 70 C SER 10 -7.267 36.441 -0.421 1.00 1.77 C ATOM 71 O SER 10 -7.544 35.456 0.236 1.00 1.89 O ATOM 72 N SER 11 -6.566 36.345 -1.549 1.00 1.66 N ATOM 73 CA SER 11 -6.130 35.131 -2.118 1.00 1.69 C ATOM 74 CB SER 11 -6.062 35.410 -3.650 1.00 1.68 C ATOM 75 OG SER 11 -5.301 36.619 -3.897 1.00 2.23 O ATOM 76 C SER 11 -4.696 34.599 -1.725 1.00 1.63 C ATOM 77 O SER 11 -4.321 33.429 -1.896 1.00 1.73 O ATOM 78 N TYR 12 -3.842 35.507 -1.191 1.00 1.54 N ATOM 79 CA TYR 12 -2.514 35.181 -0.702 1.00 1.57 C ATOM 80 CB TYR 12 -1.754 36.475 -0.441 1.00 1.59 C ATOM 81 CG TYR 12 -0.283 36.374 -0.056 1.00 1.49 C ATOM 82 CD1 TYR 12 0.741 36.923 -0.831 1.00 1.72 C ATOM 83 CE1 TYR 12 2.046 37.066 -0.362 1.00 1.83 C ATOM 84 CZ TYR 12 2.356 36.663 0.972 1.00 1.86 C ATOM 85 OH TYR 12 3.679 36.703 1.405 1.00 2.22 O ATOM 86 CD2 TYR 12 0.065 35.878 1.232 1.00 1.64 C ATOM 87 CE2 TYR 12 1.308 36.040 1.730 1.00 1.87 C ATOM 88 C TYR 12 -2.651 34.438 0.633 1.00 1.68 C ATOM 89 O TYR 12 -1.966 33.479 0.923 1.00 1.78 O ATOM 90 N VAL 13 -3.571 34.855 1.456 1.00 1.68 N ATOM 91 CA VAL 13 -3.887 34.149 2.758 1.00 1.84 C ATOM 92 CB VAL 13 -4.732 35.149 3.612 1.00 1.83 C ATOM 93 CG1 VAL 13 -6.146 34.647 3.995 1.00 2.13 C ATOM 94 CG2 VAL 13 -3.838 35.399 4.804 1.00 1.88 C ATOM 95 C VAL 13 -4.538 32.729 2.480 1.00 2.05 C ATOM 96 O VAL 13 -4.352 31.773 3.175 1.00 2.24 O ATOM 97 N ALA 14 -5.290 32.570 1.361 1.00 2.07 N ATOM 98 CA ALA 14 -5.723 31.219 0.955 1.00 2.31 C ATOM 99 CB ALA 14 -6.719 31.301 -0.231 1.00 2.38 C ATOM 100 C ALA 14 -4.573 30.223 0.572 1.00 2.36 C ATOM 101 O ALA 14 -4.585 29.045 0.862 1.00 2.61 O ATOM 102 N GLU 15 -3.557 30.717 -0.122 1.00 2.17 N ATOM 103 CA GLU 15 -2.367 30.109 -0.454 1.00 2.22 C ATOM 104 CB GLU 15 -1.682 30.935 -1.526 1.00 1.99 C ATOM 105 CG GLU 15 -0.261 30.488 -1.912 1.00 1.90 C ATOM 106 CD GLU 15 0.376 31.314 -3.046 1.00 1.90 C ATOM 107 OE1 GLU 15 -0.318 32.134 -3.663 1.00 1.97 O ATOM 108 OE2 GLU 15 1.509 30.937 -3.481 1.00 2.31 O ATOM 109 C GLU 15 -1.446 29.788 0.697 1.00 2.39 C ATOM 110 O GLU 15 -0.895 28.684 0.783 1.00 2.57 O ATOM 111 N THR 16 -1.290 30.734 1.688 1.00 2.32 N ATOM 112 CA THR 16 -0.525 30.354 2.909 1.00 2.49 C ATOM 113 CB THR 16 -0.016 31.518 3.755 1.00 2.28 C ATOM 114 OG1 THR 16 -1.012 32.446 4.240 1.00 2.42 O ATOM 115 CG2 THR 16 1.024 32.193 2.948 1.00 2.97 C ATOM 116 C THR 16 -1.245 29.417 3.777 1.00 2.70 C ATOM 117 O THR 16 -0.741 28.389 4.118 1.00 2.97 O ATOM 118 N GLY 17 -2.478 29.660 4.185 1.00 2.62 N ATOM 119 CA GLY 17 -3.370 28.583 4.626 1.00 2.89 C ATOM 120 C GLY 17 -4.155 28.931 5.815 1.00 2.70 C ATOM 121 O GLY 17 -3.843 29.876 6.535 1.00 2.40 O ATOM 122 N GLN 18 -5.206 28.208 6.083 1.00 2.94 N ATOM 123 CA GLN 18 -6.175 28.578 7.094 1.00 2.91 C ATOM 124 CB GLN 18 -7.479 27.815 6.989 1.00 3.33 C ATOM 125 CG GLN 18 -8.180 27.997 5.616 1.00 3.78 C ATOM 126 CD GLN 18 -9.412 27.050 5.568 1.00 4.23 C ATOM 127 OE1 GLN 18 -9.301 25.932 6.046 1.00 4.51 O ATOM 128 NE2 GLN 18 -10.563 27.447 5.097 1.00 4.56 N ATOM 129 C GLN 18 -5.718 28.740 8.507 1.00 2.68 C ATOM 130 O GLN 18 -6.025 29.711 9.187 1.00 2.43 O ATOM 131 N ASN 19 -4.872 27.792 9.025 1.00 2.81 N ATOM 132 CA ASN 19 -4.142 27.978 10.315 1.00 2.67 C ATOM 133 CB ASN 19 -3.262 26.715 10.745 1.00 2.99 C ATOM 134 CG ASN 19 -4.219 25.539 11.009 1.00 3.38 C ATOM 135 OD1 ASN 19 -5.452 25.620 11.108 1.00 3.54 O ATOM 136 ND2 ASN 19 -3.508 24.398 11.376 1.00 3.74 N ATOM 137 C ASN 19 -3.212 29.219 10.284 1.00 2.27 C ATOM 138 O ASN 19 -3.121 29.947 11.310 1.00 2.08 O ATOM 139 N TRP 20 -2.456 29.472 9.204 1.00 2.24 N ATOM 140 CA TRP 20 -1.634 30.694 9.096 1.00 1.98 C ATOM 141 CB TRP 20 -0.769 30.778 7.913 1.00 2.16 C ATOM 142 CG TRP 20 0.248 29.708 7.863 1.00 2.63 C ATOM 143 CD1 TRP 20 0.149 28.519 7.219 1.00 2.95 C ATOM 144 NE1 TRP 20 1.115 27.664 7.594 1.00 3.33 N ATOM 145 CE2 TRP 20 1.962 28.291 8.436 1.00 3.34 C ATOM 146 CD2 TRP 20 1.411 29.571 8.693 1.00 2.90 C ATOM 147 CE3 TRP 20 1.991 30.360 9.671 1.00 2.87 C ATOM 148 CZ3 TRP 20 3.246 29.931 10.226 1.00 3.31 C ATOM 149 CZ2 TRP 20 3.291 27.955 8.751 1.00 3.79 C ATOM 150 CH2 TRP 20 3.820 28.746 9.783 1.00 3.76 C ATOM 151 C TRP 20 -2.383 32.021 9.243 1.00 1.62 C ATOM 152 O TRP 20 -1.855 33.105 9.612 1.00 1.50 O ATOM 153 N ALA 21 -3.740 32.047 9.031 1.00 1.57 N ATOM 154 CA ALA 21 -4.541 33.289 9.176 1.00 1.34 C ATOM 155 CB ALA 21 -5.674 33.325 8.131 1.00 1.53 C ATOM 156 C ALA 21 -5.105 33.389 10.691 1.00 1.33 C ATOM 157 O ALA 21 -5.434 34.476 11.181 1.00 1.20 O ATOM 158 N SER 22 -5.119 32.274 11.415 1.00 1.66 N ATOM 159 CA SER 22 -5.953 32.207 12.605 1.00 1.78 C ATOM 160 CB SER 22 -6.970 31.060 12.620 1.00 2.23 C ATOM 161 OG SER 22 -6.436 29.802 12.170 1.00 2.38 O ATOM 162 C SER 22 -4.868 32.009 13.795 1.00 1.63 C ATOM 163 O SER 22 -4.977 32.784 14.728 1.00 1.60 O ATOM 164 N LEU 23 -4.044 30.922 13.781 1.00 1.61 N ATOM 165 CA LEU 23 -3.057 30.631 14.815 1.00 1.51 C ATOM 166 CB LEU 23 -2.416 29.293 14.550 1.00 1.62 C ATOM 167 CG LEU 23 -1.215 28.984 15.335 1.00 1.60 C ATOM 168 CD1 LEU 23 -1.369 28.900 16.941 1.00 1.67 C ATOM 169 CD2 LEU 23 -0.564 27.662 14.844 1.00 1.90 C ATOM 170 C LEU 23 -1.941 31.762 14.872 1.00 1.30 C ATOM 171 O LEU 23 -1.572 32.164 15.947 1.00 1.29 O ATOM 172 N ALA 24 -1.452 32.224 13.678 1.00 1.23 N ATOM 173 CA ALA 24 -0.473 33.334 13.551 1.00 1.12 C ATOM 174 CB ALA 24 0.016 33.506 12.086 1.00 1.20 C ATOM 175 C ALA 24 -1.045 34.678 14.089 1.00 1.11 C ATOM 176 O ALA 24 -0.337 35.398 14.789 1.00 1.20 O ATOM 177 N ALA 25 -2.348 34.910 13.847 1.00 1.18 N ATOM 178 CA ALA 25 -2.870 36.138 14.387 1.00 1.29 C ATOM 179 CB ALA 25 -4.339 36.230 13.828 1.00 1.42 C ATOM 180 C ALA 25 -2.910 36.127 15.925 1.00 1.42 C ATOM 181 O ALA 25 -2.416 37.106 16.584 1.00 1.57 O ATOM 182 N ASN 26 -3.364 35.036 16.553 1.00 1.48 N ATOM 183 CA ASN 26 -3.400 34.887 18.003 1.00 1.63 C ATOM 184 CB ASN 26 -4.131 33.610 18.399 1.00 1.77 C ATOM 185 CG ASN 26 -5.560 33.617 17.932 1.00 2.02 C ATOM 186 OD1 ASN 26 -6.135 34.701 17.654 1.00 2.08 O ATOM 187 ND2 ASN 26 -6.146 32.423 17.776 1.00 2.30 N ATOM 188 C ASN 26 -1.963 34.858 18.586 1.00 1.60 C ATOM 189 O ASN 26 -1.715 35.517 19.581 1.00 1.75 O ATOM 190 N GLU 27 -1.067 34.097 17.985 1.00 1.40 N ATOM 191 CA GLU 27 0.213 33.699 18.454 1.00 1.39 C ATOM 192 CB GLU 27 0.790 32.516 17.658 1.00 1.22 C ATOM 193 CG GLU 27 2.146 31.976 18.120 1.00 1.61 C ATOM 194 CD GLU 27 2.102 31.268 19.445 1.00 1.39 C ATOM 195 OE1 GLU 27 0.999 31.204 20.062 1.00 1.55 O ATOM 196 OE2 GLU 27 3.112 30.794 19.958 1.00 1.72 O ATOM 197 C GLU 27 1.153 34.895 18.414 1.00 1.53 C ATOM 198 O GLU 27 2.006 35.177 19.289 1.00 1.70 O ATOM 199 N LEU 28 1.110 35.722 17.363 1.00 1.54 N ATOM 200 CA LEU 28 1.827 36.940 17.258 1.00 1.72 C ATOM 201 CB LEU 28 1.566 37.498 15.802 1.00 1.76 C ATOM 202 CG LEU 28 2.255 38.854 15.470 1.00 1.59 C ATOM 203 CD1 LEU 28 3.813 38.770 15.503 1.00 1.85 C ATOM 204 CD2 LEU 28 1.688 39.350 14.072 1.00 2.21 C ATOM 205 C LEU 28 1.417 37.989 18.217 1.00 1.96 C ATOM 206 O LEU 28 2.145 38.826 18.777 1.00 2.21 O ATOM 207 N ARG 29 0.128 37.988 18.464 1.00 1.95 N ATOM 208 CA ARG 29 -0.595 38.889 19.395 1.00 2.21 C ATOM 209 CB ARG 29 0.003 39.000 20.902 1.00 2.49 C ATOM 210 CG ARG 29 0.092 37.558 21.578 1.00 2.64 C ATOM 211 CD ARG 29 0.451 37.565 23.051 1.00 2.34 C ATOM 212 NE ARG 29 0.613 36.137 23.489 1.00 2.97 N ATOM 213 CZ ARG 29 1.267 35.745 24.527 1.00 3.31 C ATOM 214 NH1 ARG 29 1.653 34.454 24.610 1.00 4.21 N ATOM 215 NH2 ARG 29 1.760 36.547 25.474 1.00 3.04 N ATOM 216 C ARG 29 -0.753 40.343 18.776 1.00 2.25 C ATOM 217 O ARG 29 -0.986 41.238 19.562 1.00 2.51 O ATOM 218 N VAL 30 -0.535 40.599 17.483 1.00 2.03 N ATOM 219 CA VAL 30 -1.009 41.819 16.798 1.00 2.06 C ATOM 220 CB VAL 30 -0.082 42.236 15.641 1.00 1.96 C ATOM 221 CG1 VAL 30 -0.656 43.423 14.937 1.00 1.99 C ATOM 222 CG2 VAL 30 1.257 42.569 16.230 1.00 1.93 C ATOM 223 C VAL 30 -2.396 41.639 16.300 1.00 2.19 C ATOM 224 O VAL 30 -2.744 40.940 15.310 1.00 2.61 O ATOM 225 N THR 31 -3.386 42.295 16.954 1.00 1.97 N ATOM 226 CA THR 31 -4.703 42.419 16.425 1.00 2.09 C ATOM 227 CB THR 31 -5.686 41.400 16.874 1.00 2.24 C ATOM 228 OG1 THR 31 -6.992 41.621 16.215 1.00 2.69 O ATOM 229 CG2 THR 31 -6.075 41.276 18.375 1.00 2.41 C ATOM 230 C THR 31 -5.065 43.840 16.798 1.00 2.05 C ATOM 231 O THR 31 -4.764 44.283 17.866 1.00 2.69 O ATOM 232 N GLU 32 -5.631 44.577 15.805 1.00 1.67 N ATOM 233 CA GLU 32 -6.132 45.984 15.970 1.00 1.86 C ATOM 234 CB GLU 32 -5.086 47.058 15.629 1.00 2.57 C ATOM 235 CG GLU 32 -5.662 48.421 15.286 1.00 2.81 C ATOM 236 CD GLU 32 -4.540 49.410 14.959 1.00 3.80 C ATOM 237 OE1 GLU 32 -3.463 48.942 14.515 1.00 4.34 O ATOM 238 OE2 GLU 32 -4.716 50.675 15.039 1.00 4.38 O ATOM 239 C GLU 32 -7.466 46.151 15.242 1.00 2.19 C ATOM 240 O GLU 32 -7.561 45.680 14.093 1.00 2.48 O ATOM 241 N ARG 33 -8.465 46.893 15.794 1.00 2.39 N ATOM 242 CA ARG 33 -9.739 47.101 15.075 1.00 2.98 C ATOM 243 CB ARG 33 -10.935 46.784 15.987 1.00 3.41 C ATOM 244 CG ARG 33 -11.014 45.334 16.621 1.00 3.79 C ATOM 245 CD ARG 33 -12.275 45.012 17.406 1.00 3.50 C ATOM 246 NE ARG 33 -12.101 43.612 17.937 1.00 3.74 N ATOM 247 CZ ARG 33 -12.825 43.080 18.975 1.00 3.67 C ATOM 248 NH1 ARG 33 -12.511 41.965 19.557 1.00 4.05 N ATOM 249 NH2 ARG 33 -13.929 43.573 19.346 1.00 3.61 N ATOM 250 C ARG 33 -9.770 48.529 14.717 1.00 2.98 C ATOM 251 O ARG 33 -9.861 49.372 15.580 1.00 3.03 O ATOM 252 N PRO 34 -9.701 48.854 13.451 1.00 3.11 N ATOM 253 CD PRO 34 -9.341 47.890 12.323 1.00 3.21 C ATOM 254 CA PRO 34 -9.565 50.217 12.998 1.00 3.22 C ATOM 255 CB PRO 34 -8.719 50.123 11.737 1.00 3.29 C ATOM 256 CG PRO 34 -9.164 48.778 11.150 1.00 3.52 C ATOM 257 C PRO 34 -10.949 50.780 12.898 1.00 3.38 C ATOM 258 O PRO 34 -11.888 49.975 12.684 1.00 3.50 O ATOM 259 N PHE 35 -11.103 52.113 13.053 1.00 3.47 N ATOM 260 CA PHE 35 -12.363 52.777 12.914 1.00 3.74 C ATOM 261 CB PHE 35 -12.601 53.834 13.962 1.00 4.13 C ATOM 262 CG PHE 35 -12.988 53.162 15.252 1.00 4.66 C ATOM 263 CD1 PHE 35 -11.987 52.578 16.039 1.00 4.61 C ATOM 264 CE1 PHE 35 -12.323 51.911 17.217 1.00 5.11 C ATOM 265 CZ PHE 35 -13.657 51.927 17.680 1.00 5.72 C ATOM 266 CD2 PHE 35 -14.354 53.018 15.629 1.00 5.27 C ATOM 267 CE2 PHE 35 -14.652 52.401 16.855 1.00 5.81 C ATOM 268 C PHE 35 -12.285 53.486 11.529 1.00 3.39 C ATOM 269 O PHE 35 -11.699 54.569 11.422 1.00 3.30 O ATOM 270 N TRP 36 -12.990 52.941 10.505 1.00 3.40 N ATOM 271 CA TRP 36 -12.999 53.522 9.209 1.00 3.20 C ATOM 272 CB TRP 36 -12.971 52.478 8.062 1.00 3.45 C ATOM 273 CG TRP 36 -12.588 52.977 6.678 1.00 3.49 C ATOM 274 CD1 TRP 36 -13.264 53.157 5.487 1.00 3.87 C ATOM 275 NE1 TRP 36 -12.454 53.689 4.515 1.00 3.91 N ATOM 276 CE2 TRP 36 -11.231 53.839 5.023 1.00 3.65 C ATOM 277 CD2 TRP 36 -11.212 53.422 6.386 1.00 3.34 C ATOM 278 CE3 TRP 36 -10.042 53.484 7.148 1.00 3.22 C ATOM 279 CZ3 TRP 36 -8.854 53.785 6.543 1.00 3.52 C ATOM 280 CZ2 TRP 36 -10.064 54.252 4.449 1.00 3.85 C ATOM 281 CH2 TRP 36 -8.846 54.111 5.173 1.00 3.85 C ATOM 282 C TRP 36 -14.203 54.385 9.145 1.00 3.26 C ATOM 283 O TRP 36 -15.327 53.927 8.855 1.00 3.69 O ATOM 284 N ILE 37 -14.084 55.715 9.305 1.00 3.02 N ATOM 285 CA ILE 37 -15.213 56.544 9.219 1.00 3.03 C ATOM 286 CB ILE 37 -15.699 56.916 10.647 1.00 3.41 C ATOM 287 CG2 ILE 37 -16.447 55.737 11.282 1.00 3.73 C ATOM 288 CG1 ILE 37 -14.702 57.433 11.655 1.00 3.15 C ATOM 289 CD1 ILE 37 -15.323 58.133 12.837 1.00 3.87 C ATOM 290 C ILE 37 -14.756 57.864 8.527 1.00 2.75 C ATOM 291 O ILE 37 -13.785 58.478 8.870 1.00 2.83 O ATOM 292 N SER 38 -15.543 58.380 7.545 1.00 2.80 N ATOM 293 CA SER 38 -15.318 59.617 6.824 1.00 2.80 C ATOM 294 CB SER 38 -15.547 59.422 5.269 1.00 3.52 C ATOM 295 OG SER 38 -14.452 58.614 4.778 1.00 3.56 O ATOM 296 C SER 38 -16.150 60.839 7.199 1.00 2.67 C ATOM 297 O SER 38 -17.375 60.979 6.978 1.00 3.16 O ATOM 298 N SER 39 -15.581 61.868 7.810 1.00 2.40 N ATOM 299 CA SER 39 -16.211 63.148 8.113 1.00 2.39 C ATOM 300 CB SER 39 -15.651 63.658 9.537 1.00 2.38 C ATOM 301 OG SER 39 -16.217 62.956 10.633 1.00 2.58 O ATOM 302 C SER 39 -15.884 64.272 7.202 1.00 2.38 C ATOM 303 O SER 39 -14.744 64.418 6.799 1.00 2.42 O ATOM 304 N PHE 40 -16.956 65.081 6.860 1.00 2.57 N ATOM 305 CA PHE 40 -16.817 66.252 5.995 1.00 2.75 C ATOM 306 CB PHE 40 -17.422 66.108 4.564 1.00 3.10 C ATOM 307 CG PHE 40 -16.841 64.854 3.955 1.00 3.46 C ATOM 308 CD1 PHE 40 -17.695 63.763 3.733 1.00 3.86 C ATOM 309 CE1 PHE 40 -17.199 62.596 3.132 1.00 4.31 C ATOM 310 CZ PHE 40 -15.857 62.549 2.612 1.00 4.49 C ATOM 311 CD2 PHE 40 -15.508 64.731 3.541 1.00 3.74 C ATOM 312 CE2 PHE 40 -15.017 63.629 2.874 1.00 4.27 C ATOM 313 C PHE 40 -17.424 67.553 6.606 1.00 2.68 C ATOM 314 O PHE 40 -18.555 67.564 7.115 1.00 2.69 O ATOM 315 N ILE 41 -16.574 68.570 6.546 1.00 2.91 N ATOM 316 CA ILE 41 -16.831 69.937 6.895 1.00 3.12 C ATOM 317 CB ILE 41 -15.944 70.453 8.056 1.00 3.70 C ATOM 318 CG2 ILE 41 -16.423 71.867 8.513 1.00 4.72 C ATOM 319 CG1 ILE 41 -15.928 69.605 9.285 1.00 3.50 C ATOM 320 CD1 ILE 41 -15.018 70.159 10.354 1.00 3.65 C ATOM 321 C ILE 41 -16.761 70.807 5.626 1.00 3.35 C ATOM 322 O ILE 41 -15.807 70.751 4.872 1.00 3.69 O ATOM 323 N GLY 42 -17.753 71.647 5.470 1.00 3.34 N ATOM 324 CA GLY 42 -18.027 72.469 4.291 1.00 3.69 C ATOM 325 C GLY 42 -18.910 71.746 3.297 1.00 4.07 C ATOM 326 O GLY 42 -19.873 71.046 3.705 1.00 4.45 O ATOM 327 N ARG 43 -18.626 71.919 2.042 1.00 4.21 N ATOM 328 CA ARG 43 -19.447 71.343 1.009 1.00 4.61 C ATOM 329 CB ARG 43 -19.671 72.495 0.033 1.00 5.28 C ATOM 330 CG ARG 43 -20.638 73.428 0.723 1.00 5.66 C ATOM 331 CD ARG 43 -21.105 74.571 -0.284 1.00 6.37 C ATOM 332 NE ARG 43 -22.118 75.431 0.271 1.00 6.73 N ATOM 333 CZ ARG 43 -23.424 75.199 0.163 1.00 6.66 C ATOM 334 NH1 ARG 43 -24.318 76.100 0.529 1.00 6.92 N ATOM 335 NH2 ARG 43 -23.914 74.064 -0.266 1.00 6.54 N ATOM 336 C ARG 43 -18.762 70.223 0.376 1.00 4.28 C ATOM 337 O ARG 43 -17.744 70.379 -0.274 1.00 4.04 O ATOM 338 N SER 44 -19.370 68.994 0.590 1.00 4.36 N ATOM 339 CA SER 44 -18.839 67.759 0.167 1.00 4.06 C ATOM 340 CB SER 44 -19.026 66.634 1.236 1.00 4.25 C ATOM 341 OG SER 44 -18.310 65.405 0.944 1.00 4.10 O ATOM 342 C SER 44 -19.544 67.297 -1.079 1.00 3.70 C ATOM 343 O SER 44 -20.713 66.979 -1.051 1.00 3.78 O ATOM 344 N LYS 45 -18.814 67.203 -2.198 1.00 3.37 N ATOM 345 CA LYS 45 -19.404 66.557 -3.354 1.00 3.04 C ATOM 346 CB LYS 45 -19.676 67.644 -4.471 1.00 3.23 C ATOM 347 CG LYS 45 -20.544 68.851 -4.053 1.00 3.18 C ATOM 348 CD LYS 45 -20.739 69.824 -5.224 1.00 3.39 C ATOM 349 CE LYS 45 -21.325 71.240 -4.869 1.00 3.49 C ATOM 350 NZ LYS 45 -21.155 72.181 -5.911 1.00 3.83 N ATOM 351 C LYS 45 -18.312 65.572 -3.719 1.00 2.53 C ATOM 352 O LYS 45 -17.160 65.941 -3.871 1.00 2.48 O TER 1817 LEU 249 END