####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS110_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS110_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 10 - 33 4.90 9.00 LONGEST_CONTINUOUS_SEGMENT: 24 11 - 34 4.95 9.39 LCS_AVERAGE: 49.90 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 4 - 14 1.93 22.86 LONGEST_CONTINUOUS_SEGMENT: 11 5 - 15 1.92 21.86 LONGEST_CONTINUOUS_SEGMENT: 11 6 - 16 1.98 21.85 LONGEST_CONTINUOUS_SEGMENT: 11 7 - 17 1.65 21.77 LCS_AVERAGE: 17.87 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 9 - 17 0.98 21.21 LCS_AVERAGE: 12.35 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 0 3 20 0 0 3 8 11 12 15 16 17 17 19 21 22 26 26 27 29 29 30 32 LCS_GDT V 3 V 3 4 5 20 3 3 4 4 9 12 15 16 17 17 17 18 19 26 26 26 29 29 30 32 LCS_GDT Q 4 Q 4 4 11 20 3 3 4 8 9 12 15 16 17 17 19 21 23 26 26 28 29 31 32 34 LCS_GDT G 5 G 5 4 11 20 3 3 4 7 9 12 14 16 17 18 20 22 25 25 27 30 31 34 34 36 LCS_GDT P 6 P 6 4 11 20 2 3 5 8 9 12 15 16 17 18 20 22 25 25 27 30 31 34 34 36 LCS_GDT W 7 W 7 3 11 20 2 3 5 8 9 12 15 16 17 17 20 22 25 25 27 30 31 34 34 36 LCS_GDT V 8 V 8 7 11 20 0 3 9 10 11 12 15 16 17 17 17 18 19 22 26 28 31 34 34 36 LCS_GDT G 9 G 9 9 11 20 4 6 9 10 11 12 15 16 17 17 17 18 19 25 26 28 31 34 34 36 LCS_GDT S 10 S 10 9 11 24 4 6 9 10 11 12 15 16 17 17 20 22 25 25 27 30 31 34 34 36 LCS_GDT S 11 S 11 9 11 24 3 6 8 10 11 12 15 16 17 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT Y 12 Y 12 9 11 24 4 6 9 10 11 12 15 16 17 17 20 22 25 26 27 30 31 34 34 36 LCS_GDT V 13 V 13 9 11 24 4 6 9 10 11 12 15 16 17 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT A 14 A 14 9 11 24 4 6 9 10 11 12 15 16 17 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT E 15 E 15 9 11 24 3 6 9 10 11 12 15 16 17 17 19 21 23 26 26 30 31 34 34 36 LCS_GDT T 16 T 16 9 11 24 3 5 9 10 11 12 15 16 17 17 19 21 22 26 26 28 31 34 34 36 LCS_GDT G 17 G 17 9 11 24 3 6 9 10 11 12 15 16 17 17 19 22 25 26 27 30 31 34 34 36 LCS_GDT Q 18 Q 18 4 7 24 3 4 4 6 7 11 14 14 17 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT N 19 N 19 4 7 24 3 4 4 6 8 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT W 20 W 20 6 7 24 6 6 6 6 6 8 10 14 15 18 19 22 25 26 27 30 31 34 34 36 LCS_GDT A 21 A 21 6 7 24 6 6 6 6 6 8 10 10 12 16 19 22 25 26 27 30 31 34 34 36 LCS_GDT S 22 S 22 6 6 24 6 6 6 6 8 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT L 23 L 23 6 6 24 6 6 6 6 7 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT A 24 A 24 6 8 24 6 6 6 7 7 8 9 10 13 16 19 22 25 26 27 30 31 34 34 36 LCS_GDT A 25 A 25 6 8 24 6 6 6 7 7 8 10 13 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT N 26 N 26 6 8 24 6 6 6 7 8 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT E 27 E 27 6 8 24 6 6 6 7 8 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT L 28 L 28 6 8 24 6 6 6 7 7 8 10 13 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT R 29 R 29 6 8 24 6 6 6 7 7 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT V 30 V 30 4 8 24 3 4 5 6 8 12 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT T 31 T 31 4 8 24 3 4 5 7 8 12 14 14 16 18 20 22 25 26 27 28 31 34 34 36 LCS_GDT E 32 E 32 4 6 24 3 3 5 5 7 11 14 14 16 18 20 22 25 26 27 30 31 34 34 36 LCS_GDT R 33 R 33 4 6 24 3 3 5 6 6 8 10 12 15 17 19 22 25 26 27 30 31 34 34 36 LCS_GDT P 34 P 34 3 6 24 0 3 4 5 6 8 10 11 14 15 17 21 22 24 26 30 31 34 34 36 LCS_GDT F 35 F 35 3 6 22 3 3 4 4 6 7 9 11 14 15 16 19 23 25 26 30 31 34 34 36 LCS_GDT W 36 W 36 3 4 22 3 3 3 4 4 7 10 11 14 15 16 19 23 25 26 30 31 34 34 36 LCS_GDT I 37 I 37 5 5 18 4 4 5 6 6 8 10 11 14 14 16 17 20 21 24 28 30 32 33 34 LCS_GDT S 38 S 38 5 5 18 4 4 5 6 6 8 10 11 14 14 16 17 20 21 24 28 30 32 33 35 LCS_GDT S 39 S 39 5 6 18 4 4 5 6 6 8 10 11 14 15 16 19 22 24 26 30 31 34 34 36 LCS_GDT F 40 F 40 5 6 18 4 4 5 6 6 8 10 11 14 15 17 19 22 25 27 30 31 34 34 36 LCS_GDT I 41 I 41 5 6 18 3 4 5 6 6 8 9 11 14 14 16 18 21 24 26 28 30 32 34 36 LCS_GDT G 42 G 42 4 6 18 3 4 4 5 6 8 10 11 14 14 16 17 20 21 24 28 30 32 33 35 LCS_GDT R 43 R 43 4 6 18 3 4 4 5 6 8 10 11 14 14 17 18 21 25 27 29 31 32 34 36 LCS_GDT S 44 S 44 3 6 18 3 3 3 5 6 8 10 11 14 14 16 17 20 21 24 28 30 32 34 35 LCS_GDT K 45 K 45 3 6 18 3 3 5 5 6 7 10 10 14 14 16 16 17 17 18 18 20 21 25 27 LCS_AVERAGE LCS_A: 26.70 ( 12.35 17.87 49.90 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 6 9 10 11 12 15 16 17 18 20 22 25 26 27 30 31 34 34 36 GDT PERCENT_AT 13.64 13.64 20.45 22.73 25.00 27.27 34.09 36.36 38.64 40.91 45.45 50.00 56.82 59.09 61.36 68.18 70.45 77.27 77.27 81.82 GDT RMS_LOCAL 0.17 0.17 0.98 1.09 1.32 1.72 2.36 2.48 2.83 3.36 3.72 3.96 4.49 4.83 4.91 5.65 5.68 6.16 6.16 6.45 GDT RMS_ALL_AT 15.72 15.72 21.35 21.38 21.93 22.07 22.40 22.37 21.92 9.12 9.08 9.08 8.77 10.44 8.62 8.48 8.62 8.64 8.64 8.45 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 3.300 0 0.626 0.630 4.486 23.182 22.182 - LGA V 3 V 3 2.766 0 0.560 0.598 6.637 34.545 20.519 6.637 LGA Q 4 Q 4 3.240 0 0.114 0.883 10.971 18.636 8.283 10.420 LGA G 5 G 5 3.749 0 0.094 0.094 3.901 14.545 14.545 - LGA P 6 P 6 3.038 0 0.210 0.235 5.003 25.455 15.065 5.003 LGA W 7 W 7 1.614 0 0.517 0.441 5.127 37.727 24.675 4.399 LGA V 8 V 8 3.473 0 0.552 0.498 7.380 30.455 17.403 6.299 LGA G 9 G 9 0.436 0 0.534 0.534 1.412 82.273 82.273 - LGA S 10 S 10 1.644 0 0.083 0.604 4.204 54.545 43.636 4.204 LGA S 11 S 11 1.938 0 0.081 0.601 2.366 58.182 51.515 2.366 LGA Y 12 Y 12 0.532 0 0.317 1.010 7.864 90.909 42.273 7.864 LGA V 13 V 13 0.529 0 0.121 0.203 1.595 90.909 77.922 1.210 LGA A 14 A 14 1.012 0 0.246 0.246 1.220 69.545 68.727 - LGA E 15 E 15 2.124 0 0.045 1.177 6.542 44.545 21.010 6.542 LGA T 16 T 16 3.419 0 0.471 1.150 5.212 17.273 16.883 5.212 LGA G 17 G 17 2.711 0 0.265 0.265 3.097 25.000 25.000 - LGA Q 18 Q 18 6.897 0 0.444 1.345 13.533 0.455 0.202 13.533 LGA N 19 N 19 11.389 0 0.088 0.986 15.171 0.000 0.000 12.195 LGA W 20 W 20 14.581 0 0.655 0.598 20.430 0.000 0.000 19.669 LGA A 21 A 21 17.442 0 0.019 0.024 20.033 0.000 0.000 - LGA S 22 S 22 20.985 0 0.048 0.636 22.264 0.000 0.000 22.238 LGA L 23 L 23 19.234 0 0.055 0.098 20.067 0.000 0.000 16.767 LGA A 24 A 24 19.242 0 0.703 0.647 20.367 0.000 0.000 - LGA A 25 A 25 24.141 0 0.047 0.049 26.910 0.000 0.000 - LGA N 26 N 26 25.430 0 0.033 0.880 29.862 0.000 0.000 29.862 LGA E 27 E 27 19.024 0 0.058 0.858 20.981 0.000 0.000 16.970 LGA L 28 L 28 18.786 0 0.874 1.266 23.064 0.000 0.000 15.958 LGA R 29 R 29 25.102 0 0.655 1.852 29.371 0.000 0.000 22.414 LGA V 30 V 30 29.342 0 0.621 0.636 32.073 0.000 0.000 30.799 LGA T 31 T 31 33.880 0 0.192 1.246 36.942 0.000 0.000 35.174 LGA E 32 E 32 35.417 0 0.319 1.634 36.583 0.000 0.000 33.760 LGA R 33 R 33 38.487 0 0.727 1.471 42.923 0.000 0.000 30.925 LGA P 34 P 34 40.377 0 0.552 0.517 41.214 0.000 0.000 40.984 LGA F 35 F 35 36.377 0 0.667 1.319 37.185 0.000 0.000 30.654 LGA W 36 W 36 35.935 0 0.695 1.398 44.321 0.000 0.000 44.321 LGA I 37 I 37 35.451 0 0.507 1.000 36.348 0.000 0.000 35.908 LGA S 38 S 38 34.964 0 0.067 0.078 38.904 0.000 0.000 38.904 LGA S 39 S 39 34.200 0 0.205 0.724 36.252 0.000 0.000 36.252 LGA F 40 F 40 27.604 0 0.305 0.954 30.153 0.000 0.000 24.632 LGA I 41 I 41 27.561 0 0.651 1.088 29.894 0.000 0.000 27.216 LGA G 42 G 42 30.859 0 0.315 0.315 31.514 0.000 0.000 - LGA R 43 R 43 29.106 0 0.702 1.293 32.716 0.000 0.000 32.716 LGA S 44 S 44 26.053 0 0.410 0.771 30.120 0.000 0.000 24.531 LGA K 45 K 45 28.817 0 0.294 1.084 28.909 0.000 0.000 26.325 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.218 7.993 8.971 16.322 12.548 3.273 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.48 35.227 30.834 0.619 LGA_LOCAL RMSD: 2.485 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 22.369 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.218 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.284241 * X + 0.780555 * Y + 0.556724 * Z + -0.889082 Y_new = -0.919637 * X + -0.057799 * Y + -0.388493 * Z + 20.316031 Z_new = -0.271062 * X + -0.622409 * Y + 0.734256 * Z + 2.538009 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -1.870562 0.274497 -0.703142 [DEG: -107.1753 15.7275 -40.2871 ] ZXZ: 0.961535 0.746226 -2.730858 [DEG: 55.0919 42.7556 -156.4666 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS110_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS110_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.48 30.834 8.22 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS110_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 12 N ALA 2 10.989 36.557 9.477 1.00 0.00 N ATOM 13 CA ALA 2 9.921 35.783 10.203 1.00 0.00 C ATOM 14 C ALA 2 8.708 36.525 10.769 1.00 0.00 C ATOM 15 O ALA 2 7.571 36.076 10.613 1.00 0.00 O ATOM 17 CB ALA 2 10.519 35.026 11.379 1.00 0.00 C ATOM 18 N VAL 3 8.952 37.658 11.426 1.00 0.00 N ATOM 19 CA VAL 3 8.155 38.021 12.686 1.00 0.00 C ATOM 20 C VAL 3 7.431 38.284 11.364 1.00 0.00 C ATOM 21 O VAL 3 6.414 37.652 11.072 1.00 0.00 O ATOM 23 CB VAL 3 8.915 39.036 13.561 1.00 0.00 C ATOM 24 CG1 VAL 3 8.035 39.515 14.706 1.00 0.00 C ATOM 25 CG2 VAL 3 10.201 38.421 14.093 1.00 0.00 C ATOM 26 N GLN 4 7.954 39.215 10.567 1.00 0.00 N ATOM 27 CA GLN 4 7.640 38.929 9.022 1.00 0.00 C ATOM 28 C GLN 4 8.577 37.890 8.403 1.00 0.00 C ATOM 29 O GLN 4 9.792 37.943 8.603 1.00 0.00 O ATOM 31 CB GLN 4 7.724 40.223 8.210 1.00 0.00 C ATOM 32 CD GLN 4 5.283 40.863 8.339 1.00 0.00 C ATOM 33 CG GLN 4 6.713 41.280 8.623 1.00 0.00 C ATOM 34 OE1 GLN 4 4.920 40.601 7.192 1.00 0.00 O ATOM 37 NE2 GLN 4 4.468 40.801 9.384 1.00 0.00 N ATOM 38 N GLY 5 8.012 36.946 7.651 1.00 0.00 N ATOM 39 CA GLY 5 8.920 36.209 6.730 1.00 0.00 C ATOM 40 C GLY 5 8.961 37.226 5.588 1.00 0.00 C ATOM 41 O GLY 5 8.040 38.029 5.431 1.00 0.00 O ATOM 43 N PRO 6 10.031 37.193 4.794 1.00 0.00 N ATOM 44 CA PRO 6 10.212 38.155 3.681 1.00 0.00 C ATOM 45 C PRO 6 9.511 37.875 2.350 1.00 0.00 C ATOM 46 O PRO 6 8.743 38.704 1.860 1.00 0.00 O ATOM 47 CB PRO 6 11.722 38.157 3.435 1.00 0.00 C ATOM 48 CD PRO 6 11.308 36.506 5.118 1.00 0.00 C ATOM 49 CG PRO 6 12.183 36.831 3.941 1.00 0.00 C ATOM 50 N TRP 7 9.778 36.705 1.768 1.00 0.00 N ATOM 51 CA TRP 7 7.811 36.128 1.606 1.00 0.00 C ATOM 52 C TRP 7 6.286 36.052 1.516 1.00 0.00 C ATOM 53 O TRP 7 5.581 36.835 2.155 1.00 0.00 O ATOM 55 CB TRP 7 7.453 35.126 2.706 1.00 0.00 C ATOM 58 CG TRP 7 8.149 33.808 2.566 1.00 0.00 C ATOM 59 CD1 TRP 7 9.219 33.364 3.288 1.00 0.00 C ATOM 61 NE1 TRP 7 9.581 32.104 2.875 1.00 0.00 N ATOM 62 CD2 TRP 7 7.823 32.759 1.645 1.00 0.00 C ATOM 63 CE2 TRP 7 8.737 31.712 1.866 1.00 0.00 C ATOM 64 CH2 TRP 7 7.741 30.401 0.174 1.00 0.00 C ATOM 65 CZ2 TRP 7 8.705 30.526 1.134 1.00 0.00 C ATOM 66 CE3 TRP 7 6.848 32.604 0.655 1.00 0.00 C ATOM 67 CZ3 TRP 7 6.820 31.426 -0.067 1.00 0.00 C ATOM 68 N VAL 8 5.777 35.110 0.721 1.00 0.00 N ATOM 69 CA VAL 8 4.338 34.430 1.610 1.00 0.00 C ATOM 70 C VAL 8 3.940 34.154 3.061 1.00 0.00 C ATOM 71 O VAL 8 4.738 34.355 3.978 1.00 0.00 O ATOM 73 CB VAL 8 3.998 33.007 1.127 1.00 0.00 C ATOM 74 CG1 VAL 8 2.861 32.423 1.953 1.00 0.00 C ATOM 75 CG2 VAL 8 3.638 33.018 -0.350 1.00 0.00 C ATOM 76 N GLY 9 2.707 33.693 3.267 1.00 0.00 N ATOM 77 CA GLY 9 2.972 32.337 4.488 1.00 0.00 C ATOM 78 C GLY 9 3.121 31.085 5.354 1.00 0.00 C ATOM 79 O GLY 9 2.625 31.040 6.481 1.00 0.00 O ATOM 81 N SER 10 3.807 30.070 4.829 1.00 0.00 N ATOM 82 CA SER 10 4.025 28.947 5.569 1.00 0.00 C ATOM 83 C SER 10 4.891 29.233 6.797 1.00 0.00 C ATOM 84 O SER 10 4.634 28.706 7.880 1.00 0.00 O ATOM 86 CB SER 10 4.684 27.862 4.715 1.00 0.00 C ATOM 88 OG SER 10 3.810 27.414 3.695 1.00 0.00 O ATOM 89 N SER 11 5.917 30.067 6.627 1.00 0.00 N ATOM 90 CA SER 11 6.747 30.354 7.662 1.00 0.00 C ATOM 91 C SER 11 5.908 31.013 8.759 1.00 0.00 C ATOM 92 O SER 11 6.213 30.879 9.946 1.00 0.00 O ATOM 94 CB SER 11 7.891 31.257 7.198 1.00 0.00 C ATOM 96 OG SER 11 7.410 32.533 6.813 1.00 0.00 O ATOM 97 N TYR 12 4.854 31.724 8.361 1.00 0.00 N ATOM 98 CA TYR 12 4.316 32.807 9.150 1.00 0.00 C ATOM 99 C TYR 12 3.808 31.572 9.896 1.00 0.00 C ATOM 100 O TYR 12 3.928 31.487 11.120 1.00 0.00 O ATOM 102 CB TYR 12 3.443 33.718 8.285 1.00 0.00 C ATOM 103 CG TYR 12 2.843 34.885 9.035 1.00 0.00 C ATOM 105 OH TYR 12 1.206 38.102 11.099 1.00 0.00 O ATOM 106 CZ TYR 12 1.746 37.037 10.416 1.00 0.00 C ATOM 107 CD1 TYR 12 3.605 36.007 9.332 1.00 0.00 C ATOM 108 CE1 TYR 12 3.065 37.078 10.018 1.00 0.00 C ATOM 109 CD2 TYR 12 1.516 34.860 9.445 1.00 0.00 C ATOM 110 CE2 TYR 12 0.959 35.923 10.131 1.00 0.00 C ATOM 111 N VAL 13 3.241 30.617 9.159 1.00 0.00 N ATOM 112 CA VAL 13 2.973 29.374 9.776 1.00 0.00 C ATOM 113 C VAL 13 4.027 28.374 10.253 1.00 0.00 C ATOM 114 O VAL 13 3.911 27.816 11.345 1.00 0.00 O ATOM 116 CB VAL 13 2.087 28.483 8.886 1.00 0.00 C ATOM 117 CG1 VAL 13 1.959 27.091 9.486 1.00 0.00 C ATOM 118 CG2 VAL 13 0.716 29.114 8.695 1.00 0.00 C ATOM 119 N ALA 14 5.054 28.149 9.434 1.00 0.00 N ATOM 120 CA ALA 14 6.269 27.658 10.137 1.00 0.00 C ATOM 121 C ALA 14 6.866 28.238 11.420 1.00 0.00 C ATOM 122 O ALA 14 6.427 27.904 12.522 1.00 0.00 O ATOM 124 CB ALA 14 7.469 27.684 9.202 1.00 0.00 C ATOM 125 N GLU 15 7.866 29.106 11.277 1.00 0.00 N ATOM 126 CA GLU 15 8.554 29.772 12.485 1.00 0.00 C ATOM 127 C GLU 15 7.554 30.704 13.172 1.00 0.00 C ATOM 128 O GLU 15 7.619 30.907 14.385 1.00 0.00 O ATOM 130 CB GLU 15 9.804 30.531 12.038 1.00 0.00 C ATOM 131 CD GLU 15 12.149 30.424 11.104 1.00 0.00 C ATOM 132 CG GLU 15 10.935 29.636 11.558 1.00 0.00 C ATOM 133 OE1 GLU 15 12.048 31.665 11.003 1.00 0.00 O ATOM 134 OE2 GLU 15 13.200 29.800 10.847 1.00 0.00 O ATOM 135 N THR 16 6.632 31.273 12.395 1.00 0.00 N ATOM 136 CA THR 16 5.673 32.215 12.922 1.00 0.00 C ATOM 137 C THR 16 5.038 31.243 13.918 1.00 0.00 C ATOM 138 O THR 16 5.527 31.087 15.038 1.00 0.00 O ATOM 140 CB THR 16 4.768 32.780 11.811 1.00 0.00 C ATOM 142 OG1 THR 16 5.567 33.476 10.847 1.00 0.00 O ATOM 143 CG2 THR 16 3.753 33.752 12.395 1.00 0.00 C ATOM 144 N GLY 17 3.951 30.589 13.509 1.00 0.00 N ATOM 145 CA GLY 17 3.587 29.324 14.291 1.00 0.00 C ATOM 146 C GLY 17 4.052 27.909 13.940 1.00 0.00 C ATOM 147 O GLY 17 3.231 27.012 13.742 1.00 0.00 O ATOM 149 N GLN 18 5.368 27.712 13.864 1.00 0.00 N ATOM 150 CA GLN 18 5.855 26.331 13.811 1.00 0.00 C ATOM 151 C GLN 18 6.207 25.611 15.115 1.00 0.00 C ATOM 152 O GLN 18 7.294 25.046 15.243 1.00 0.00 O ATOM 154 CB GLN 18 7.110 26.239 12.940 1.00 0.00 C ATOM 155 CD GLN 18 8.830 24.763 11.825 1.00 0.00 C ATOM 156 CG GLN 18 7.629 24.822 12.749 1.00 0.00 C ATOM 157 OE1 GLN 18 9.907 25.255 12.159 1.00 0.00 O ATOM 160 NE2 GLN 18 8.647 24.157 10.657 1.00 0.00 N ATOM 161 N ASN 19 5.287 25.633 16.078 1.00 0.00 N ATOM 162 CA ASN 19 5.478 24.796 17.244 1.00 0.00 C ATOM 163 C ASN 19 5.495 23.268 17.164 1.00 0.00 C ATOM 164 O ASN 19 6.387 22.623 17.716 1.00 0.00 O ATOM 166 CB ASN 19 4.419 25.105 18.304 1.00 0.00 C ATOM 167 CG ASN 19 4.656 26.432 18.995 1.00 0.00 C ATOM 168 OD1 ASN 19 5.759 26.979 18.950 1.00 0.00 O ATOM 171 ND2 ASN 19 3.620 26.956 19.640 1.00 0.00 N ATOM 172 N TRP 20 4.509 22.693 16.476 1.00 0.00 N ATOM 173 CA TRP 20 4.702 21.252 16.069 1.00 0.00 C ATOM 174 C TRP 20 5.829 20.645 15.231 1.00 0.00 C ATOM 175 O TRP 20 6.346 19.577 15.558 1.00 0.00 O ATOM 177 CB TRP 20 3.484 20.747 15.292 1.00 0.00 C ATOM 180 CG TRP 20 2.281 20.506 16.153 1.00 0.00 C ATOM 181 CD1 TRP 20 1.101 21.190 16.122 1.00 0.00 C ATOM 183 NE1 TRP 20 0.234 20.682 17.059 1.00 0.00 N ATOM 184 CD2 TRP 20 2.143 19.510 17.174 1.00 0.00 C ATOM 185 CE2 TRP 20 0.853 19.649 17.718 1.00 0.00 C ATOM 186 CH2 TRP 20 1.226 17.866 19.220 1.00 0.00 C ATOM 187 CZ2 TRP 20 0.383 18.830 18.744 1.00 0.00 C ATOM 188 CE3 TRP 20 2.984 18.515 17.680 1.00 0.00 C ATOM 189 CZ3 TRP 20 2.513 17.705 18.697 1.00 0.00 C ATOM 190 N ALA 21 6.206 21.328 14.150 1.00 0.00 N ATOM 191 CA ALA 21 7.253 20.851 13.321 1.00 0.00 C ATOM 192 C ALA 21 8.607 20.927 14.028 1.00 0.00 C ATOM 193 O ALA 21 9.458 20.056 13.845 1.00 0.00 O ATOM 195 CB ALA 21 7.301 21.641 12.021 1.00 0.00 C ATOM 196 N SER 22 8.804 21.970 14.835 1.00 0.00 N ATOM 197 CA SER 22 9.981 22.004 15.661 1.00 0.00 C ATOM 198 C SER 22 10.151 20.854 16.657 1.00 0.00 C ATOM 199 O SER 22 11.237 20.283 16.773 1.00 0.00 O ATOM 201 CB SER 22 10.035 23.304 16.465 1.00 0.00 C ATOM 203 OG SER 22 11.178 23.340 17.301 1.00 0.00 O ATOM 204 N LEU 23 9.078 20.516 17.372 1.00 0.00 N ATOM 205 CA LEU 23 9.153 19.534 18.324 1.00 0.00 C ATOM 206 C LEU 23 9.283 18.172 17.638 1.00 0.00 C ATOM 207 O LEU 23 9.888 17.251 18.187 1.00 0.00 O ATOM 209 CB LEU 23 7.923 19.575 19.233 1.00 0.00 C ATOM 210 CG LEU 23 7.796 20.797 20.146 1.00 0.00 C ATOM 211 CD1 LEU 23 6.462 20.785 20.878 1.00 0.00 C ATOM 212 CD2 LEU 23 8.945 20.847 21.141 1.00 0.00 C ATOM 213 N ALA 24 8.714 18.048 16.439 1.00 0.00 N ATOM 214 CA ALA 24 8.895 16.822 15.665 1.00 0.00 C ATOM 215 C ALA 24 10.094 17.473 14.972 1.00 0.00 C ATOM 216 O ALA 24 9.956 18.514 14.328 1.00 0.00 O ATOM 218 CB ALA 24 7.630 16.496 14.885 1.00 0.00 C ATOM 219 N ALA 25 11.270 16.859 15.107 1.00 0.00 N ATOM 220 CA ALA 25 12.448 17.371 14.445 1.00 0.00 C ATOM 221 C ALA 25 12.343 17.304 12.920 1.00 0.00 C ATOM 222 O ALA 25 12.791 18.213 12.221 1.00 0.00 O ATOM 224 CB ALA 25 13.684 16.608 14.898 1.00 0.00 C ATOM 225 N ASN 26 11.751 16.224 12.407 1.00 0.00 N ATOM 226 CA ASN 26 11.603 16.034 10.935 1.00 0.00 C ATOM 227 C ASN 26 10.645 17.118 10.439 1.00 0.00 C ATOM 228 O ASN 26 10.860 17.706 9.379 1.00 0.00 O ATOM 230 CB ASN 26 11.112 14.619 10.624 1.00 0.00 C ATOM 231 CG ASN 26 11.108 14.316 9.139 1.00 0.00 C ATOM 232 OD1 ASN 26 12.158 14.303 8.496 1.00 0.00 O ATOM 235 ND2 ASN 26 9.925 14.071 8.589 1.00 0.00 N ATOM 236 N GLU 27 9.587 17.381 11.207 1.00 0.00 N ATOM 237 CA GLU 27 8.675 18.433 10.854 1.00 0.00 C ATOM 238 C GLU 27 9.319 19.820 10.916 1.00 0.00 C ATOM 239 O GLU 27 9.033 20.679 10.081 1.00 0.00 O ATOM 241 CB GLU 27 7.447 18.407 11.767 1.00 0.00 C ATOM 242 CD GLU 27 5.367 17.185 12.514 1.00 0.00 C ATOM 243 CG GLU 27 6.539 17.209 11.552 1.00 0.00 C ATOM 244 OE1 GLU 27 5.366 17.991 13.468 1.00 0.00 O ATOM 245 OE2 GLU 27 4.450 16.361 12.314 1.00 0.00 O ATOM 246 N LEU 28 10.187 20.034 11.904 1.00 0.00 N ATOM 247 CA LEU 28 10.855 21.233 11.972 1.00 0.00 C ATOM 248 C LEU 28 10.908 20.493 10.635 1.00 0.00 C ATOM 249 O LEU 28 11.058 19.271 10.600 1.00 0.00 O ATOM 251 CB LEU 28 11.897 21.203 13.092 1.00 0.00 C ATOM 252 CG LEU 28 12.654 22.508 13.349 1.00 0.00 C ATOM 253 CD1 LEU 28 11.713 23.580 13.878 1.00 0.00 C ATOM 254 CD2 LEU 28 13.799 22.282 14.324 1.00 0.00 C ATOM 255 N ARG 29 10.786 21.235 9.533 1.00 0.00 N ATOM 256 CA ARG 29 13.409 20.584 9.263 1.00 0.00 C ATOM 257 C ARG 29 14.422 19.837 8.392 1.00 0.00 C ATOM 258 O ARG 29 14.657 18.643 8.589 1.00 0.00 O ATOM 260 CB ARG 29 13.906 19.839 10.504 1.00 0.00 C ATOM 261 CD ARG 29 16.269 20.673 10.656 1.00 0.00 C ATOM 263 NE ARG 29 16.487 21.407 9.412 1.00 0.00 N ATOM 264 CG ARG 29 15.377 19.460 10.451 1.00 0.00 C ATOM 265 CZ ARG 29 17.002 22.631 9.347 1.00 0.00 C ATOM 268 NH1 ARG 29 17.164 23.221 8.171 1.00 0.00 N ATOM 271 NH2 ARG 29 17.353 23.263 10.459 1.00 0.00 N ATOM 272 N VAL 30 15.019 20.540 7.431 1.00 0.00 N ATOM 273 CA VAL 30 16.194 19.936 6.689 1.00 0.00 C ATOM 274 C VAL 30 17.496 19.566 7.401 1.00 0.00 C ATOM 275 O VAL 30 17.931 18.414 7.353 1.00 0.00 O ATOM 277 CB VAL 30 16.659 20.843 5.534 1.00 0.00 C ATOM 278 CG1 VAL 30 17.957 20.321 4.937 1.00 0.00 C ATOM 279 CG2 VAL 30 15.580 20.943 4.468 1.00 0.00 C ATOM 280 N THR 31 18.117 20.543 8.062 1.00 0.00 N ATOM 281 CA THR 31 19.094 20.079 9.155 1.00 0.00 C ATOM 282 C THR 31 19.055 19.334 10.492 1.00 0.00 C ATOM 283 O THR 31 20.021 18.666 10.863 1.00 0.00 O ATOM 285 CB THR 31 19.884 21.263 9.745 1.00 0.00 C ATOM 287 OG1 THR 31 20.661 21.884 8.714 1.00 0.00 O ATOM 288 CG2 THR 31 20.824 20.782 10.840 1.00 0.00 C ATOM 289 N GLU 32 17.940 19.451 11.211 1.00 0.00 N ATOM 290 CA GLU 32 17.750 18.528 12.336 1.00 0.00 C ATOM 291 C GLU 32 18.112 17.056 12.547 1.00 0.00 C ATOM 292 O GLU 32 19.177 16.607 12.124 1.00 0.00 O ATOM 294 CB GLU 32 16.268 18.425 12.700 1.00 0.00 C ATOM 295 CD GLU 32 16.557 18.071 15.184 1.00 0.00 C ATOM 296 CG GLU 32 15.983 17.524 13.892 1.00 0.00 C ATOM 297 OE1 GLU 32 16.844 19.285 15.241 1.00 0.00 O ATOM 298 OE2 GLU 32 16.718 17.285 16.141 1.00 0.00 O ATOM 299 N ARG 33 17.223 16.309 13.202 1.00 0.00 N ATOM 300 CA ARG 33 16.948 15.138 10.986 1.00 0.00 C ATOM 301 C ARG 33 17.114 13.966 10.017 1.00 0.00 C ATOM 302 O ARG 33 18.228 13.663 9.587 1.00 0.00 O ATOM 304 CB ARG 33 17.576 15.964 9.861 1.00 0.00 C ATOM 305 CD ARG 33 17.527 18.034 8.445 1.00 0.00 C ATOM 307 NE ARG 33 16.893 19.329 8.206 1.00 0.00 N ATOM 308 CG ARG 33 16.858 17.273 9.577 1.00 0.00 C ATOM 309 CZ ARG 33 15.843 19.512 7.413 1.00 0.00 C ATOM 312 NH1 ARG 33 15.333 20.726 7.257 1.00 0.00 N ATOM 315 NH2 ARG 33 15.304 18.480 6.777 1.00 0.00 N ATOM 316 N PRO 34 16.006 13.310 9.673 1.00 0.00 N ATOM 317 CA PRO 34 16.033 12.045 8.935 1.00 0.00 C ATOM 318 C PRO 34 16.479 12.620 7.589 1.00 0.00 C ATOM 319 O PRO 34 17.279 12.006 6.881 1.00 0.00 O ATOM 320 CB PRO 34 14.593 11.533 9.027 1.00 0.00 C ATOM 321 CD PRO 34 14.656 13.521 10.357 1.00 0.00 C ATOM 322 CG PRO 34 14.059 12.145 10.277 1.00 0.00 C ATOM 323 N PHE 35 15.961 13.796 7.238 1.00 0.00 N ATOM 324 CA PHE 35 16.370 14.464 5.986 1.00 0.00 C ATOM 325 C PHE 35 17.656 15.290 6.069 1.00 0.00 C ATOM 326 O PHE 35 18.014 15.986 5.119 1.00 0.00 O ATOM 328 CB PHE 35 15.258 15.387 5.483 1.00 0.00 C ATOM 329 CG PHE 35 14.035 14.657 5.007 1.00 0.00 C ATOM 330 CZ PHE 35 11.767 13.312 4.128 1.00 0.00 C ATOM 331 CD1 PHE 35 14.077 13.297 4.753 1.00 0.00 C ATOM 332 CE1 PHE 35 12.951 12.626 4.314 1.00 0.00 C ATOM 333 CD2 PHE 35 12.841 15.329 4.815 1.00 0.00 C ATOM 334 CE2 PHE 35 11.715 14.658 4.378 1.00 0.00 C ATOM 335 N TRP 36 18.348 15.208 7.205 1.00 0.00 N ATOM 336 CA TRP 36 19.787 15.805 7.273 1.00 0.00 C ATOM 337 C TRP 36 21.020 15.227 6.577 1.00 0.00 C ATOM 338 O TRP 36 21.902 15.971 6.147 1.00 0.00 O ATOM 340 CB TRP 36 20.259 15.902 8.726 1.00 0.00 C ATOM 343 CG TRP 36 21.620 16.509 8.875 1.00 0.00 C ATOM 344 CD1 TRP 36 21.918 17.839 8.967 1.00 0.00 C ATOM 346 NE1 TRP 36 23.275 18.012 9.094 1.00 0.00 N ATOM 347 CD2 TRP 36 22.868 15.810 8.949 1.00 0.00 C ATOM 348 CE2 TRP 36 23.879 16.780 9.086 1.00 0.00 C ATOM 349 CH2 TRP 36 25.553 15.115 9.148 1.00 0.00 C ATOM 350 CZ2 TRP 36 25.228 16.442 9.186 1.00 0.00 C ATOM 351 CE3 TRP 36 23.230 14.461 8.913 1.00 0.00 C ATOM 352 CZ3 TRP 36 24.568 14.131 9.013 1.00 0.00 C ATOM 353 N ILE 37 21.080 13.900 6.467 1.00 0.00 N ATOM 354 CA ILE 37 21.975 13.400 5.285 1.00 0.00 C ATOM 355 C ILE 37 21.639 14.053 3.944 1.00 0.00 C ATOM 356 O ILE 37 21.474 15.272 3.865 1.00 0.00 O ATOM 358 CB ILE 37 21.886 11.871 5.119 1.00 0.00 C ATOM 359 CD1 ILE 37 23.789 11.468 6.767 1.00 0.00 C ATOM 360 CG1 ILE 37 22.353 11.168 6.395 1.00 0.00 C ATOM 361 CG2 ILE 37 22.679 11.422 3.901 1.00 0.00 C ATOM 362 N SER 38 21.538 13.243 2.890 1.00 0.00 N ATOM 363 CA SER 38 21.083 13.771 1.596 1.00 0.00 C ATOM 364 C SER 38 19.623 14.183 1.398 1.00 0.00 C ATOM 365 O SER 38 19.315 14.989 0.519 1.00 0.00 O ATOM 367 CB SER 38 21.363 12.764 0.479 1.00 0.00 C ATOM 369 OG SER 38 20.552 11.611 0.617 1.00 0.00 O ATOM 370 N SER 39 18.727 13.629 2.214 1.00 0.00 N ATOM 371 CA SER 39 17.278 14.126 2.215 1.00 0.00 C ATOM 372 C SER 39 17.120 15.622 2.498 1.00 0.00 C ATOM 373 O SER 39 16.444 16.330 1.751 1.00 0.00 O ATOM 375 CB SER 39 16.448 13.356 3.243 1.00 0.00 C ATOM 377 OG SER 39 16.325 11.991 2.881 1.00 0.00 O ATOM 378 N PHE 40 17.742 16.098 3.575 1.00 0.00 N ATOM 379 CA PHE 40 17.544 17.475 4.063 1.00 0.00 C ATOM 380 C PHE 40 18.188 18.189 2.873 1.00 0.00 C ATOM 381 O PHE 40 17.489 18.732 2.017 1.00 0.00 O ATOM 383 CB PHE 40 18.206 17.659 5.431 1.00 0.00 C ATOM 384 CG PHE 40 18.059 19.044 5.993 1.00 0.00 C ATOM 385 CZ PHE 40 17.792 21.606 7.038 1.00 0.00 C ATOM 386 CD1 PHE 40 17.022 19.866 5.585 1.00 0.00 C ATOM 387 CE1 PHE 40 16.887 21.140 6.103 1.00 0.00 C ATOM 388 CD2 PHE 40 18.956 19.525 6.930 1.00 0.00 C ATOM 389 CE2 PHE 40 18.821 20.799 7.447 1.00 0.00 C ATOM 390 N ILE 41 19.519 18.185 2.821 1.00 0.00 N ATOM 391 CA ILE 41 20.095 18.335 1.353 1.00 0.00 C ATOM 392 C ILE 41 19.845 17.804 -0.059 1.00 0.00 C ATOM 393 O ILE 41 19.876 18.563 -1.028 1.00 0.00 O ATOM 395 CB ILE 41 21.594 17.988 1.297 1.00 0.00 C ATOM 396 CD1 ILE 41 22.100 19.711 3.106 1.00 0.00 C ATOM 397 CG1 ILE 41 22.437 19.191 1.726 1.00 0.00 C ATOM 398 CG2 ILE 41 21.974 17.494 -0.090 1.00 0.00 C ATOM 399 N GLY 42 19.599 16.499 -0.173 1.00 0.00 N ATOM 400 CA GLY 42 19.905 15.711 -1.433 1.00 0.00 C ATOM 401 C GLY 42 18.505 16.229 -1.767 1.00 0.00 C ATOM 402 O GLY 42 18.153 16.372 -2.939 1.00 0.00 O ATOM 404 N ARG 43 17.709 16.509 -0.736 1.00 0.00 N ATOM 405 CA ARG 43 16.565 17.367 -1.031 1.00 0.00 C ATOM 406 C ARG 43 16.344 18.871 -0.858 1.00 0.00 C ATOM 407 O ARG 43 15.247 19.375 -1.102 1.00 0.00 O ATOM 409 CB ARG 43 15.321 16.879 -0.285 1.00 0.00 C ATOM 410 CD ARG 43 13.609 15.079 0.069 1.00 0.00 C ATOM 412 NE ARG 43 12.462 15.939 -0.215 1.00 0.00 N ATOM 413 CG ARG 43 14.844 15.500 -0.710 1.00 0.00 C ATOM 414 CZ ARG 43 11.361 15.986 0.527 1.00 0.00 C ATOM 417 NH1 ARG 43 10.370 16.799 0.191 1.00 0.00 N ATOM 420 NH2 ARG 43 11.254 15.218 1.603 1.00 0.00 N ATOM 421 N SER 44 17.386 19.585 -0.434 1.00 0.00 N ATOM 422 CA SER 44 17.342 21.005 -1.706 1.00 0.00 C ATOM 423 C SER 44 17.840 21.398 -3.098 1.00 0.00 C ATOM 424 O SER 44 18.867 20.901 -3.559 1.00 0.00 O ATOM 426 CB SER 44 17.896 22.292 -1.092 1.00 0.00 C ATOM 428 OG SER 44 19.271 22.154 -0.774 1.00 0.00 O ATOM 429 N LYS 45 17.109 22.291 -3.766 1.00 0.00 N ATOM 430 CA LYS 45 17.893 23.062 -4.831 1.00 0.00 C ATOM 431 C LYS 45 18.921 23.727 -3.914 1.00 0.00 C ATOM 432 O LYS 45 19.532 23.066 -3.074 1.00 0.00 O ATOM 434 CB LYS 45 16.964 23.996 -5.608 1.00 0.00 C ATOM 435 CD LYS 45 15.503 26.037 -5.614 1.00 0.00 C ATOM 436 CE LYS 45 14.197 25.384 -6.035 1.00 0.00 C ATOM 437 CG LYS 45 16.341 25.096 -4.764 1.00 0.00 C ATOM 441 NZ LYS 45 13.335 25.060 -4.865 1.00 0.00 N TER END