####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS110_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS110_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 28 17 - 44 4.67 13.62 LONGEST_CONTINUOUS_SEGMENT: 28 18 - 45 4.82 13.72 LCS_AVERAGE: 58.94 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.82 16.04 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.76 16.10 LCS_AVERAGE: 19.27 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.63 16.63 LCS_AVERAGE: 12.76 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 21 3 3 3 3 3 6 8 9 11 12 14 17 18 19 20 21 22 23 26 26 LCS_GDT V 3 V 3 3 5 22 3 3 4 5 6 6 8 9 11 13 14 16 18 19 19 21 22 23 26 26 LCS_GDT Q 4 Q 4 3 5 22 3 3 6 8 9 10 11 13 15 17 18 20 22 23 24 26 27 29 32 33 LCS_GDT G 5 G 5 3 5 22 0 3 4 5 6 7 10 13 15 17 19 22 23 24 25 27 29 31 33 34 LCS_GDT P 6 P 6 3 6 22 2 3 4 5 6 11 13 14 15 17 19 22 23 24 28 29 32 33 36 38 LCS_GDT W 7 W 7 3 6 22 3 4 6 7 9 11 13 14 15 17 19 22 23 24 28 29 32 34 37 38 LCS_GDT V 8 V 8 3 6 22 3 4 6 7 9 11 13 14 15 17 19 22 23 24 28 29 32 34 37 38 LCS_GDT G 9 G 9 5 9 22 5 6 7 8 9 11 13 14 15 17 19 22 23 24 28 29 32 34 37 38 LCS_GDT S 10 S 10 5 9 22 5 6 7 8 9 11 13 14 15 17 19 22 23 24 28 29 32 33 37 38 LCS_GDT S 11 S 11 5 9 22 5 6 7 8 9 10 13 14 15 17 19 22 23 24 28 28 30 33 36 36 LCS_GDT Y 12 Y 12 5 9 22 5 6 7 8 9 10 13 14 15 17 19 22 23 24 28 29 32 33 37 38 LCS_GDT V 13 V 13 5 9 22 5 6 7 8 9 11 13 14 15 17 19 22 23 24 28 29 32 34 37 38 LCS_GDT A 14 A 14 5 9 22 4 4 5 8 9 11 13 14 15 17 19 22 23 24 28 29 32 34 37 38 LCS_GDT E 15 E 15 5 9 22 4 6 7 8 9 11 13 14 15 17 19 22 23 24 28 29 32 33 36 38 LCS_GDT T 16 T 16 5 9 22 4 4 7 8 9 10 11 13 15 17 19 22 23 24 28 29 32 34 37 38 LCS_GDT G 17 G 17 4 9 28 3 4 5 6 7 9 11 12 13 16 19 22 26 27 28 29 32 34 37 38 LCS_GDT Q 18 Q 18 4 7 28 3 4 5 6 9 10 13 14 17 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT N 19 N 19 4 11 28 3 4 4 6 6 9 12 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT W 20 W 20 10 11 28 5 9 10 11 11 11 12 15 17 19 21 24 26 27 27 28 29 31 37 38 LCS_GDT A 21 A 21 10 11 28 8 9 10 11 11 11 15 16 18 20 21 24 26 27 27 28 29 34 37 38 LCS_GDT S 22 S 22 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT L 23 L 23 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT A 24 A 24 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT A 25 A 25 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT N 26 N 26 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT E 27 E 27 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT L 28 L 28 10 11 28 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT R 29 R 29 10 11 28 4 8 10 11 11 11 12 15 17 19 21 24 26 27 28 29 32 34 37 38 LCS_GDT V 30 V 30 4 11 28 4 4 5 6 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT T 31 T 31 4 6 28 4 4 5 9 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT E 32 E 32 4 6 28 3 3 6 7 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT R 33 R 33 4 6 28 0 3 5 6 8 11 13 15 18 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT P 34 P 34 4 6 28 1 3 5 7 7 11 13 14 16 20 21 24 26 27 28 29 32 34 37 38 LCS_GDT F 35 F 35 4 9 28 3 3 5 6 8 9 11 13 16 19 21 24 26 27 28 29 32 34 37 38 LCS_GDT W 36 W 36 5 9 28 3 4 5 7 8 9 10 12 15 18 21 23 26 27 27 29 32 34 37 38 LCS_GDT I 37 I 37 6 9 28 4 5 6 7 8 9 12 16 18 20 21 24 26 27 27 29 32 34 37 38 LCS_GDT S 38 S 38 6 9 28 4 5 6 7 12 14 15 16 18 20 21 24 26 27 27 29 32 34 37 38 LCS_GDT S 39 S 39 6 9 28 4 5 6 9 12 14 15 16 18 20 21 24 26 27 27 29 32 34 37 38 LCS_GDT F 40 F 40 6 9 28 4 5 6 7 9 14 15 16 18 20 21 24 26 27 27 28 31 34 37 38 LCS_GDT I 41 I 41 6 9 28 3 5 10 11 12 14 15 16 18 20 21 24 26 27 27 28 31 34 37 38 LCS_GDT G 42 G 42 6 9 28 3 5 6 7 10 11 12 16 17 20 21 24 26 27 27 28 31 34 37 38 LCS_GDT R 43 R 43 3 9 28 3 3 5 6 8 9 10 12 17 20 21 24 26 27 27 28 31 34 37 38 LCS_GDT S 44 S 44 3 9 28 3 3 3 5 6 9 11 14 17 20 21 24 26 27 27 29 32 34 37 38 LCS_GDT K 45 K 45 3 3 28 0 0 3 3 3 3 3 5 5 11 15 16 18 21 21 27 29 34 37 38 LCS_AVERAGE LCS_A: 30.32 ( 12.76 19.27 58.94 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 10 11 12 14 15 16 18 20 21 24 26 27 28 29 32 34 37 38 GDT PERCENT_AT 18.18 20.45 22.73 25.00 27.27 31.82 34.09 36.36 40.91 45.45 47.73 54.55 59.09 61.36 63.64 65.91 72.73 77.27 84.09 86.36 GDT RMS_LOCAL 0.29 0.46 0.63 0.87 1.90 2.10 2.22 2.41 2.81 3.35 3.54 3.92 4.25 4.40 5.66 6.22 6.43 6.66 7.01 7.17 GDT RMS_ALL_AT 16.40 16.56 16.63 16.69 15.01 15.60 15.82 15.88 15.48 15.07 15.05 14.14 14.10 14.06 9.14 9.10 8.96 10.13 9.70 9.24 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 36.139 0 0.491 0.528 37.851 0.000 0.000 - LGA V 3 V 3 34.647 0 0.442 0.597 35.487 0.000 0.000 32.388 LGA Q 4 Q 4 34.019 0 0.209 1.161 37.839 0.000 0.000 37.839 LGA G 5 G 5 29.849 0 0.476 0.476 31.441 0.000 0.000 - LGA P 6 P 6 27.459 0 0.163 0.217 32.026 0.000 0.000 31.021 LGA W 7 W 7 25.016 0 0.493 0.395 30.546 0.000 0.000 25.635 LGA V 8 V 8 20.264 0 0.672 1.503 22.274 0.000 0.000 16.899 LGA G 9 G 9 21.653 0 0.443 0.443 22.167 0.000 0.000 - LGA S 10 S 10 24.973 0 0.078 0.155 29.349 0.000 0.000 29.349 LGA S 11 S 11 26.446 0 0.068 0.692 30.303 0.000 0.000 30.303 LGA Y 12 Y 12 20.110 0 0.232 1.429 22.153 0.000 0.000 17.443 LGA V 13 V 13 17.781 0 0.310 0.275 19.080 0.000 0.000 17.791 LGA A 14 A 14 19.276 0 0.146 0.166 21.082 0.000 0.000 - LGA E 15 E 15 21.204 0 0.353 1.354 28.460 0.000 0.000 27.949 LGA T 16 T 16 17.281 0 0.898 0.826 17.981 0.000 0.000 13.291 LGA G 17 G 17 13.867 0 0.192 0.192 15.141 0.000 0.000 - LGA Q 18 Q 18 7.732 0 0.490 1.133 12.427 0.000 0.000 10.235 LGA N 19 N 19 5.620 0 0.103 1.427 8.832 1.364 0.682 8.346 LGA W 20 W 20 4.178 0 0.586 0.418 13.277 19.545 5.584 13.277 LGA A 21 A 21 3.306 0 0.102 0.098 4.222 23.636 20.000 - LGA S 22 S 22 2.387 0 0.081 0.622 2.760 45.455 48.485 0.629 LGA L 23 L 23 0.803 0 0.086 0.094 2.268 86.818 70.909 2.268 LGA A 24 A 24 0.759 0 0.046 0.048 1.294 73.636 72.000 - LGA A 25 A 25 2.095 0 0.067 0.072 2.757 38.636 36.364 - LGA N 26 N 26 2.257 0 0.036 0.073 3.053 36.364 42.045 2.373 LGA E 27 E 27 2.232 0 0.210 0.656 4.509 31.818 24.444 3.918 LGA L 28 L 28 2.562 0 0.249 0.251 3.539 23.636 39.318 1.628 LGA R 29 R 29 5.483 0 0.150 1.394 14.886 3.182 1.157 14.886 LGA V 30 V 30 2.071 0 0.526 0.588 6.421 48.182 28.312 6.421 LGA T 31 T 31 2.316 0 0.246 1.194 4.719 39.545 30.909 2.117 LGA E 32 E 32 2.434 0 0.581 1.488 5.386 20.455 25.657 5.386 LGA R 33 R 33 5.330 0 0.555 0.965 9.527 0.455 0.165 9.527 LGA P 34 P 34 7.895 0 0.548 0.704 8.621 0.000 0.000 8.514 LGA F 35 F 35 8.088 0 0.542 1.414 13.773 0.000 0.000 13.773 LGA W 36 W 36 7.451 0 0.523 1.546 12.608 0.000 0.000 12.376 LGA I 37 I 37 4.149 0 0.205 0.787 5.826 20.909 12.273 4.611 LGA S 38 S 38 2.340 0 0.073 0.074 3.202 50.909 40.000 3.092 LGA S 39 S 39 1.921 0 0.136 0.534 5.475 38.636 30.303 5.475 LGA F 40 F 40 2.697 0 0.226 0.921 10.986 49.545 18.512 10.877 LGA I 41 I 41 2.180 0 0.538 0.665 6.582 26.364 23.636 5.402 LGA G 42 G 42 7.551 0 0.196 0.196 11.006 0.000 0.000 - LGA R 43 R 43 9.394 0 0.501 1.415 14.786 0.000 0.000 13.213 LGA S 44 S 44 10.275 0 0.360 0.744 12.479 0.000 0.000 9.170 LGA K 45 K 45 15.059 0 0.249 0.764 22.281 0.000 0.000 22.281 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.847 8.677 9.830 15.434 12.972 7.948 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.41 36.932 33.236 0.638 LGA_LOCAL RMSD: 2.409 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 15.876 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.847 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.055062 * X + -0.995304 * Y + -0.079614 * Z + 7.529986 Y_new = 0.015026 * X + -0.078900 * Y + 0.996769 * Z + 59.908131 Z_new = -0.998370 * X + -0.056080 * Y + 0.010612 * Z + -4.420538 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 0.266416 1.513690 -1.383786 [DEG: 15.2645 86.7280 -79.2851 ] ZXZ: -3.061890 1.560185 -1.626909 [DEG: -175.4333 89.3920 -93.2150 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS110_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS110_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.41 33.236 8.85 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS110_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 12 N ALA 2 -25.893 32.313 8.820 1.00 0.00 N ATOM 13 CA ALA 2 -24.912 31.205 8.537 1.00 0.00 C ATOM 14 C ALA 2 -25.434 30.287 7.430 1.00 0.00 C ATOM 15 O ALA 2 -25.424 29.064 7.574 1.00 0.00 O ATOM 17 CB ALA 2 -24.638 30.404 9.800 1.00 0.00 C ATOM 18 N VAL 3 -25.890 30.879 6.326 1.00 0.00 N ATOM 19 CA VAL 3 -25.399 29.907 5.020 1.00 0.00 C ATOM 20 C VAL 3 -24.237 29.051 4.515 1.00 0.00 C ATOM 21 O VAL 3 -23.816 28.108 5.186 1.00 0.00 O ATOM 23 CB VAL 3 -25.434 30.687 3.693 1.00 0.00 C ATOM 24 CG1 VAL 3 -24.877 29.837 2.561 1.00 0.00 C ATOM 25 CG2 VAL 3 -26.852 31.138 3.377 1.00 0.00 C ATOM 26 N GLN 4 -23.719 29.379 3.332 1.00 0.00 N ATOM 27 CA GLN 4 -22.461 28.741 2.900 1.00 0.00 C ATOM 28 C GLN 4 -21.737 29.725 3.820 1.00 0.00 C ATOM 29 O GLN 4 -22.255 30.802 4.117 1.00 0.00 O ATOM 31 CB GLN 4 -22.316 28.819 1.378 1.00 0.00 C ATOM 32 CD GLN 4 -21.039 26.675 0.984 1.00 0.00 C ATOM 33 CG GLN 4 -21.042 28.185 0.843 1.00 0.00 C ATOM 34 OE1 GLN 4 -21.976 26.001 0.556 1.00 0.00 O ATOM 37 NE2 GLN 4 -19.983 26.140 1.585 1.00 0.00 N ATOM 38 N GLY 5 -20.538 29.354 4.270 1.00 0.00 N ATOM 39 CA GLY 5 -19.650 30.386 4.980 1.00 0.00 C ATOM 40 C GLY 5 -18.678 31.065 4.012 1.00 0.00 C ATOM 41 O GLY 5 -17.462 30.956 4.166 1.00 0.00 O ATOM 43 N PRO 6 -19.218 31.766 3.014 1.00 0.00 N ATOM 44 CA PRO 6 -18.310 32.734 2.235 1.00 0.00 C ATOM 45 C PRO 6 -17.889 34.183 2.486 1.00 0.00 C ATOM 46 O PRO 6 -16.878 34.643 1.952 1.00 0.00 O ATOM 47 CB PRO 6 -18.980 32.849 0.865 1.00 0.00 C ATOM 48 CD PRO 6 -20.498 31.607 2.237 1.00 0.00 C ATOM 49 CG PRO 6 -20.430 32.631 1.139 1.00 0.00 C ATOM 50 N TRP 7 -18.667 34.902 3.296 1.00 0.00 N ATOM 51 CA TRP 7 -17.468 35.781 4.356 1.00 0.00 C ATOM 52 C TRP 7 -16.630 35.298 5.542 1.00 0.00 C ATOM 53 O TRP 7 -16.369 34.102 5.677 1.00 0.00 O ATOM 55 CB TRP 7 -18.127 36.991 5.020 1.00 0.00 C ATOM 58 CG TRP 7 -18.527 38.062 4.052 1.00 0.00 C ATOM 59 CD1 TRP 7 -19.751 38.225 3.469 1.00 0.00 C ATOM 61 NE1 TRP 7 -19.739 39.320 2.639 1.00 0.00 N ATOM 62 CD2 TRP 7 -17.700 39.121 3.553 1.00 0.00 C ATOM 63 CE2 TRP 7 -18.488 39.886 2.675 1.00 0.00 C ATOM 64 CH2 TRP 7 -16.688 41.348 2.231 1.00 0.00 C ATOM 65 CZ2 TRP 7 -17.992 41.004 2.006 1.00 0.00 C ATOM 66 CE3 TRP 7 -16.370 39.497 3.764 1.00 0.00 C ATOM 67 CZ3 TRP 7 -15.882 40.605 3.100 1.00 0.00 C ATOM 68 N VAL 8 -16.211 36.230 6.398 1.00 0.00 N ATOM 69 CA VAL 8 -14.903 36.087 7.230 1.00 0.00 C ATOM 70 C VAL 8 -16.336 36.210 7.752 1.00 0.00 C ATOM 71 O VAL 8 -16.613 37.026 8.633 1.00 0.00 O ATOM 73 CB VAL 8 -13.901 37.209 6.904 1.00 0.00 C ATOM 74 CG1 VAL 8 -13.428 37.098 5.463 1.00 0.00 C ATOM 75 CG2 VAL 8 -14.526 38.572 7.160 1.00 0.00 C ATOM 76 N GLY 9 -17.244 35.400 7.208 1.00 0.00 N ATOM 77 CA GLY 9 -18.255 34.857 8.568 1.00 0.00 C ATOM 78 C GLY 9 -17.915 33.859 9.677 1.00 0.00 C ATOM 79 O GLY 9 -16.793 33.352 9.740 1.00 0.00 O ATOM 81 N SER 10 -18.882 33.579 10.550 1.00 0.00 N ATOM 82 CA SER 10 -18.642 32.801 11.633 1.00 0.00 C ATOM 83 C SER 10 -18.433 31.399 11.056 1.00 0.00 C ATOM 84 O SER 10 -17.700 30.590 11.626 1.00 0.00 O ATOM 86 CB SER 10 -19.805 32.888 12.624 1.00 0.00 C ATOM 88 OG SER 10 -20.987 32.332 12.074 1.00 0.00 O ATOM 89 N SER 11 -19.080 31.114 9.925 1.00 0.00 N ATOM 90 CA SER 11 -19.032 29.819 9.348 1.00 0.00 C ATOM 91 C SER 11 -17.579 29.686 8.888 1.00 0.00 C ATOM 92 O SER 11 -17.000 28.601 8.950 1.00 0.00 O ATOM 94 CB SER 11 -20.058 29.697 8.219 1.00 0.00 C ATOM 96 OG SER 11 -21.380 29.781 8.720 1.00 0.00 O ATOM 97 N TYR 12 -16.993 30.790 8.425 1.00 0.00 N ATOM 98 CA TYR 12 -15.695 30.756 7.962 1.00 0.00 C ATOM 99 C TYR 12 -14.803 31.199 9.123 1.00 0.00 C ATOM 100 O TYR 12 -13.625 31.498 8.930 1.00 0.00 O ATOM 102 CB TYR 12 -15.542 31.655 6.733 1.00 0.00 C ATOM 103 CG TYR 12 -16.333 31.190 5.531 1.00 0.00 C ATOM 105 OH TYR 12 -18.524 29.910 2.237 1.00 0.00 O ATOM 106 CZ TYR 12 -17.798 30.334 3.326 1.00 0.00 C ATOM 107 CD1 TYR 12 -17.679 30.866 5.648 1.00 0.00 C ATOM 108 CE1 TYR 12 -18.410 30.441 4.555 1.00 0.00 C ATOM 109 CD2 TYR 12 -15.732 31.076 4.285 1.00 0.00 C ATOM 110 CE2 TYR 12 -16.448 30.651 3.181 1.00 0.00 C ATOM 111 N VAL 13 -15.368 31.238 10.331 1.00 0.00 N ATOM 112 CA VAL 13 -14.241 30.845 11.494 1.00 0.00 C ATOM 113 C VAL 13 -13.099 29.841 11.663 1.00 0.00 C ATOM 114 O VAL 13 -12.079 29.933 10.978 1.00 0.00 O ATOM 116 CB VAL 13 -14.913 30.471 12.828 1.00 0.00 C ATOM 117 CG1 VAL 13 -13.875 29.995 13.832 1.00 0.00 C ATOM 118 CG2 VAL 13 -15.691 31.654 13.382 1.00 0.00 C ATOM 119 N ALA 14 -13.271 28.885 12.577 1.00 0.00 N ATOM 120 CA ALA 14 -12.281 27.713 12.645 1.00 0.00 C ATOM 121 C ALA 14 -12.189 26.633 11.564 1.00 0.00 C ATOM 122 O ALA 14 -11.133 26.027 11.373 1.00 0.00 O ATOM 124 CB ALA 14 -12.491 26.915 13.922 1.00 0.00 C ATOM 125 N GLU 15 -13.294 26.395 10.859 1.00 0.00 N ATOM 126 CA GLU 15 -13.158 25.608 9.633 1.00 0.00 C ATOM 127 C GLU 15 -12.768 26.091 8.234 1.00 0.00 C ATOM 128 O GLU 15 -13.165 25.493 7.233 1.00 0.00 O ATOM 130 CB GLU 15 -14.466 24.881 9.314 1.00 0.00 C ATOM 131 CD GLU 15 -16.151 23.123 9.985 1.00 0.00 C ATOM 132 CG GLU 15 -14.841 23.807 10.323 1.00 0.00 C ATOM 133 OE1 GLU 15 -16.835 23.580 9.045 1.00 0.00 O ATOM 134 OE2 GLU 15 -16.493 22.129 10.661 1.00 0.00 O ATOM 135 N THR 16 -11.991 27.172 8.167 1.00 0.00 N ATOM 136 CA THR 16 -11.493 27.670 6.863 1.00 0.00 C ATOM 137 C THR 16 -10.403 26.668 7.250 1.00 0.00 C ATOM 138 O THR 16 -10.300 26.272 8.411 1.00 0.00 O ATOM 140 CB THR 16 -11.306 29.198 6.876 1.00 0.00 C ATOM 142 OG1 THR 16 -10.308 29.552 7.843 1.00 0.00 O ATOM 143 CG2 THR 16 -12.609 29.891 7.247 1.00 0.00 C ATOM 144 N GLY 17 -9.590 26.260 6.275 1.00 0.00 N ATOM 145 CA GLY 17 -8.764 25.051 6.378 1.00 0.00 C ATOM 146 C GLY 17 -7.572 25.879 6.859 1.00 0.00 C ATOM 147 O GLY 17 -6.509 25.333 7.160 1.00 0.00 O ATOM 149 N GLN 18 -7.748 27.199 6.931 1.00 0.00 N ATOM 150 CA GLN 18 -6.777 27.940 7.939 1.00 0.00 C ATOM 151 C GLN 18 -6.916 28.314 9.416 1.00 0.00 C ATOM 152 O GLN 18 -6.771 29.482 9.782 1.00 0.00 O ATOM 154 CB GLN 18 -6.408 29.325 7.407 1.00 0.00 C ATOM 155 CD GLN 18 -5.258 30.690 5.620 1.00 0.00 C ATOM 156 CG GLN 18 -5.618 29.302 6.108 1.00 0.00 C ATOM 157 OE1 GLN 18 -5.969 31.658 5.891 1.00 0.00 O ATOM 160 NE2 GLN 18 -4.150 30.792 4.895 1.00 0.00 N ATOM 161 N ASN 19 -7.197 27.324 10.263 1.00 0.00 N ATOM 162 CA ASN 19 -7.022 27.580 11.766 1.00 0.00 C ATOM 163 C ASN 19 -5.719 28.103 12.371 1.00 0.00 C ATOM 164 O ASN 19 -5.730 29.055 13.153 1.00 0.00 O ATOM 166 CB ASN 19 -7.316 26.308 12.564 1.00 0.00 C ATOM 167 CG ASN 19 -7.251 26.533 14.062 1.00 0.00 C ATOM 168 OD1 ASN 19 -8.033 27.303 14.620 1.00 0.00 O ATOM 171 ND2 ASN 19 -6.313 25.860 14.719 1.00 0.00 N ATOM 172 N TRP 20 -4.597 27.481 12.010 1.00 0.00 N ATOM 173 CA TRP 20 -3.280 27.718 12.678 1.00 0.00 C ATOM 174 C TRP 20 -3.006 29.087 12.053 1.00 0.00 C ATOM 175 O TRP 20 -2.427 29.964 12.697 1.00 0.00 O ATOM 177 CB TRP 20 -2.302 26.588 12.351 1.00 0.00 C ATOM 180 CG TRP 20 -2.618 25.300 13.047 1.00 0.00 C ATOM 181 CD1 TRP 20 -3.056 24.143 12.471 1.00 0.00 C ATOM 183 NE1 TRP 20 -3.238 23.175 13.429 1.00 0.00 N ATOM 184 CD2 TRP 20 -2.521 25.038 14.453 1.00 0.00 C ATOM 185 CE2 TRP 20 -2.916 23.703 14.654 1.00 0.00 C ATOM 186 CH2 TRP 20 -2.562 23.884 16.982 1.00 0.00 C ATOM 187 CZ2 TRP 20 -2.941 23.114 15.918 1.00 0.00 C ATOM 188 CE3 TRP 20 -2.140 25.802 15.559 1.00 0.00 C ATOM 189 CZ3 TRP 20 -2.166 25.215 16.810 1.00 0.00 C ATOM 190 N ALA 21 -3.421 29.269 10.800 1.00 0.00 N ATOM 191 CA ALA 21 -3.401 30.593 10.270 1.00 0.00 C ATOM 192 C ALA 21 -4.161 31.722 10.970 1.00 0.00 C ATOM 193 O ALA 21 -3.590 32.773 11.264 1.00 0.00 O ATOM 195 CB ALA 21 -3.922 30.600 8.841 1.00 0.00 C ATOM 196 N SER 22 -5.449 31.503 11.236 1.00 0.00 N ATOM 197 CA SER 22 -6.325 32.545 11.850 1.00 0.00 C ATOM 198 C SER 22 -5.648 32.726 13.210 1.00 0.00 C ATOM 199 O SER 22 -5.434 33.853 13.658 1.00 0.00 O ATOM 201 CB SER 22 -7.776 32.064 11.900 1.00 0.00 C ATOM 203 OG SER 22 -8.614 33.034 12.501 1.00 0.00 O ATOM 204 N LEU 23 -5.312 31.614 13.865 1.00 0.00 N ATOM 205 CA LEU 23 -4.803 31.649 15.194 1.00 0.00 C ATOM 206 C LEU 23 -3.406 32.228 14.969 1.00 0.00 C ATOM 207 O LEU 23 -2.856 32.897 15.847 1.00 0.00 O ATOM 209 CB LEU 23 -4.833 30.251 15.815 1.00 0.00 C ATOM 210 CG LEU 23 -6.218 29.663 16.095 1.00 0.00 C ATOM 211 CD1 LEU 23 -6.104 28.222 16.567 1.00 0.00 C ATOM 212 CD2 LEU 23 -6.958 30.500 17.127 1.00 0.00 C ATOM 213 N ALA 24 -2.832 31.973 13.793 1.00 0.00 N ATOM 214 CA ALA 24 -1.620 32.476 13.524 1.00 0.00 C ATOM 215 C ALA 24 -1.628 34.002 13.417 1.00 0.00 C ATOM 216 O ALA 24 -0.704 34.667 13.885 1.00 0.00 O ATOM 218 CB ALA 24 -1.074 31.883 12.234 1.00 0.00 C ATOM 219 N ALA 25 -2.674 34.554 12.802 1.00 0.00 N ATOM 220 CA ALA 25 -2.795 35.989 12.699 1.00 0.00 C ATOM 221 C ALA 25 -3.027 36.688 14.041 1.00 0.00 C ATOM 222 O ALA 25 -2.541 37.799 14.260 1.00 0.00 O ATOM 224 CB ALA 25 -3.930 36.360 11.756 1.00 0.00 C ATOM 225 N ASN 26 -3.768 36.035 14.936 1.00 0.00 N ATOM 226 CA ASN 26 -3.989 36.594 16.310 1.00 0.00 C ATOM 227 C ASN 26 -2.680 36.703 17.094 1.00 0.00 C ATOM 228 O ASN 26 -2.410 37.729 17.721 1.00 0.00 O ATOM 230 CB ASN 26 -4.999 35.740 17.080 1.00 0.00 C ATOM 231 CG ASN 26 -6.419 35.924 16.580 1.00 0.00 C ATOM 232 OD1 ASN 26 -6.726 36.907 15.904 1.00 0.00 O ATOM 235 ND2 ASN 26 -7.289 34.978 16.912 1.00 0.00 N ATOM 236 N GLU 27 -1.869 35.646 17.058 1.00 0.00 N ATOM 237 CA GLU 27 -0.561 35.687 17.713 1.00 0.00 C ATOM 238 C GLU 27 0.206 36.840 17.062 1.00 0.00 C ATOM 239 O GLU 27 0.539 37.823 17.724 1.00 0.00 O ATOM 241 CB GLU 27 0.155 34.343 17.564 1.00 0.00 C ATOM 242 CD GLU 27 1.418 34.382 19.752 1.00 0.00 C ATOM 243 CG GLU 27 1.514 34.286 18.242 1.00 0.00 C ATOM 244 OE1 GLU 27 0.322 34.125 20.294 1.00 0.00 O ATOM 245 OE2 GLU 27 2.436 34.713 20.393 1.00 0.00 O ATOM 246 N LEU 28 0.486 36.715 15.764 1.00 0.00 N ATOM 247 CA LEU 28 1.107 37.748 15.103 1.00 0.00 C ATOM 248 C LEU 28 0.272 39.025 14.994 1.00 0.00 C ATOM 249 O LEU 28 0.781 40.127 15.206 1.00 0.00 O ATOM 251 CB LEU 28 1.508 37.317 13.691 1.00 0.00 C ATOM 252 CG LEU 28 2.617 36.266 13.592 1.00 0.00 C ATOM 253 CD1 LEU 28 2.793 35.804 12.153 1.00 0.00 C ATOM 254 CD2 LEU 28 3.927 36.816 14.134 1.00 0.00 C ATOM 255 N ARG 29 -1.011 38.876 14.662 1.00 0.00 N ATOM 256 CA ARG 29 -1.887 40.018 14.704 1.00 0.00 C ATOM 257 C ARG 29 -2.607 40.026 16.054 1.00 0.00 C ATOM 258 O ARG 29 -3.838 40.008 16.108 1.00 0.00 O ATOM 260 CB ARG 29 -2.878 39.975 13.540 1.00 0.00 C ATOM 261 CD ARG 29 -4.877 41.285 14.309 1.00 0.00 C ATOM 263 NE ARG 29 -5.809 40.189 14.054 1.00 0.00 N ATOM 264 CG ARG 29 -3.686 41.252 13.366 1.00 0.00 C ATOM 265 CZ ARG 29 -6.805 40.246 13.174 1.00 0.00 C ATOM 268 NH1 ARG 29 -7.602 39.200 13.010 1.00 0.00 N ATOM 271 NH2 ARG 29 -7.000 41.347 12.463 1.00 0.00 N ATOM 272 N VAL 30 -1.839 40.051 17.143 1.00 0.00 N ATOM 273 CA VAL 30 -2.523 40.510 18.479 1.00 0.00 C ATOM 274 C VAL 30 -3.358 41.791 18.503 1.00 0.00 C ATOM 275 O VAL 30 -4.571 41.753 18.290 1.00 0.00 O ATOM 277 CB VAL 30 -1.492 40.691 19.608 1.00 0.00 C ATOM 278 CG1 VAL 30 -2.150 41.294 20.839 1.00 0.00 C ATOM 279 CG2 VAL 30 -0.835 39.362 19.948 1.00 0.00 C ATOM 280 N THR 31 -2.708 42.926 18.763 1.00 0.00 N ATOM 281 CA THR 31 -3.401 44.181 18.689 1.00 0.00 C ATOM 282 C THR 31 -3.822 45.052 17.503 1.00 0.00 C ATOM 283 O THR 31 -5.014 45.238 17.256 1.00 0.00 O ATOM 285 CB THR 31 -2.667 45.279 19.480 1.00 0.00 C ATOM 287 OG1 THR 31 -2.600 44.912 20.864 1.00 0.00 O ATOM 288 CG2 THR 31 -3.405 46.603 19.364 1.00 0.00 C ATOM 289 N GLU 32 -2.842 45.583 16.773 1.00 0.00 N ATOM 290 CA GLU 32 -3.568 44.635 14.891 1.00 0.00 C ATOM 291 C GLU 32 -3.170 43.945 13.586 1.00 0.00 C ATOM 292 O GLU 32 -2.181 43.211 13.541 1.00 0.00 O ATOM 294 CB GLU 32 -4.431 45.616 14.095 1.00 0.00 C ATOM 295 CD GLU 32 -6.709 44.908 14.927 1.00 0.00 C ATOM 296 CG GLU 32 -5.706 46.040 14.807 1.00 0.00 C ATOM 297 OE1 GLU 32 -6.615 43.945 14.137 1.00 0.00 O ATOM 298 OE2 GLU 32 -7.589 44.986 15.810 1.00 0.00 O ATOM 299 N ARG 33 -3.940 44.180 12.523 1.00 0.00 N ATOM 300 CA ARG 33 -4.123 43.178 11.457 1.00 0.00 C ATOM 301 C ARG 33 -2.879 43.887 10.919 1.00 0.00 C ATOM 302 O ARG 33 -1.857 43.249 10.661 1.00 0.00 O ATOM 304 CB ARG 33 -5.512 43.311 10.829 1.00 0.00 C ATOM 305 CD ARG 33 -7.214 42.446 9.200 1.00 0.00 C ATOM 307 NE ARG 33 -8.260 42.285 10.209 1.00 0.00 N ATOM 308 CG ARG 33 -5.825 42.251 9.785 1.00 0.00 C ATOM 309 CZ ARG 33 -9.492 42.770 10.091 1.00 0.00 C ATOM 312 NH1 ARG 33 -10.377 42.573 11.060 1.00 0.00 N ATOM 315 NH2 ARG 33 -9.836 43.450 9.007 1.00 0.00 N ATOM 316 N PRO 34 -2.967 45.206 10.747 1.00 0.00 N ATOM 317 CA PRO 34 -1.452 45.761 11.412 1.00 0.00 C ATOM 318 C PRO 34 -0.160 45.657 12.225 1.00 0.00 C ATOM 319 O PRO 34 0.866 45.205 11.715 1.00 0.00 O ATOM 320 CB PRO 34 -1.841 46.978 12.253 1.00 0.00 C ATOM 321 CD PRO 34 -3.860 46.260 11.188 1.00 0.00 C ATOM 322 CG PRO 34 -3.099 47.479 11.627 1.00 0.00 C ATOM 323 N PHE 35 -0.212 46.076 13.490 1.00 0.00 N ATOM 324 CA PHE 35 0.969 46.689 14.163 1.00 0.00 C ATOM 325 C PHE 35 1.091 45.225 14.591 1.00 0.00 C ATOM 326 O PHE 35 2.190 44.670 14.614 1.00 0.00 O ATOM 328 CB PHE 35 0.528 47.825 15.088 1.00 0.00 C ATOM 329 CG PHE 35 0.017 49.036 14.361 1.00 0.00 C ATOM 330 CZ PHE 35 -0.923 51.277 13.014 1.00 0.00 C ATOM 331 CD1 PHE 35 -1.342 49.257 14.228 1.00 0.00 C ATOM 332 CE1 PHE 35 -1.814 50.372 13.559 1.00 0.00 C ATOM 333 CD2 PHE 35 0.895 49.951 13.809 1.00 0.00 C ATOM 334 CE2 PHE 35 0.424 51.065 13.140 1.00 0.00 C ATOM 335 N TRP 36 -0.039 44.603 14.929 1.00 0.00 N ATOM 336 CA TRP 36 0.115 43.050 14.203 1.00 0.00 C ATOM 337 C TRP 36 0.581 42.018 13.174 1.00 0.00 C ATOM 338 O TRP 36 1.781 41.803 13.003 1.00 0.00 O ATOM 340 CB TRP 36 -1.264 42.473 13.876 1.00 0.00 C ATOM 343 CG TRP 36 -1.213 41.097 13.282 1.00 0.00 C ATOM 344 CD1 TRP 36 -0.096 40.357 13.026 1.00 0.00 C ATOM 346 NE1 TRP 36 -0.444 39.145 12.481 1.00 0.00 N ATOM 347 CD2 TRP 36 -2.329 40.298 12.871 1.00 0.00 C ATOM 348 CE2 TRP 36 -1.812 39.087 12.377 1.00 0.00 C ATOM 349 CH2 TRP 36 -3.981 38.284 11.902 1.00 0.00 C ATOM 350 CZ2 TRP 36 -2.631 38.071 11.888 1.00 0.00 C ATOM 351 CE3 TRP 36 -3.713 40.489 12.874 1.00 0.00 C ATOM 352 CZ3 TRP 36 -4.521 39.478 12.389 1.00 0.00 C ATOM 353 N ILE 37 -0.370 41.382 12.490 1.00 0.00 N ATOM 354 CA ILE 37 0.073 40.710 11.168 1.00 0.00 C ATOM 355 C ILE 37 0.819 41.300 9.970 1.00 0.00 C ATOM 356 O ILE 37 1.894 40.822 9.605 1.00 0.00 O ATOM 358 CB ILE 37 -1.125 40.094 10.419 1.00 0.00 C ATOM 359 CD1 ILE 37 -0.793 37.808 11.498 1.00 0.00 C ATOM 360 CG1 ILE 37 -1.740 38.959 11.242 1.00 0.00 C ATOM 361 CG2 ILE 37 -0.704 39.627 9.034 1.00 0.00 C ATOM 362 N SER 38 0.247 42.338 9.359 1.00 0.00 N ATOM 363 CA SER 38 0.934 43.007 8.305 1.00 0.00 C ATOM 364 C SER 38 2.216 43.760 8.664 1.00 0.00 C ATOM 365 O SER 38 3.154 43.815 7.867 1.00 0.00 O ATOM 367 CB SER 38 0.011 44.019 7.622 1.00 0.00 C ATOM 369 OG SER 38 -0.337 45.070 8.506 1.00 0.00 O ATOM 370 N SER 39 2.257 44.338 9.864 1.00 0.00 N ATOM 371 CA SER 39 3.481 45.073 10.343 1.00 0.00 C ATOM 372 C SER 39 4.659 44.130 10.594 1.00 0.00 C ATOM 373 O SER 39 5.809 44.482 10.327 1.00 0.00 O ATOM 375 CB SER 39 3.171 45.855 11.620 1.00 0.00 C ATOM 377 OG SER 39 4.314 46.554 12.081 1.00 0.00 O ATOM 378 N PHE 40 4.372 42.934 11.107 1.00 0.00 N ATOM 379 CA PHE 40 5.447 41.882 11.218 1.00 0.00 C ATOM 380 C PHE 40 5.308 40.852 10.096 1.00 0.00 C ATOM 381 O PHE 40 5.902 39.775 10.158 1.00 0.00 O ATOM 383 CB PHE 40 5.386 41.196 12.584 1.00 0.00 C ATOM 384 CG PHE 40 5.693 42.109 13.736 1.00 0.00 C ATOM 385 CZ PHE 40 6.270 43.798 15.867 1.00 0.00 C ATOM 386 CD1 PHE 40 4.679 42.598 14.540 1.00 0.00 C ATOM 387 CE1 PHE 40 4.963 43.438 15.601 1.00 0.00 C ATOM 388 CD2 PHE 40 6.998 42.478 14.016 1.00 0.00 C ATOM 389 CE2 PHE 40 7.280 43.318 15.076 1.00 0.00 C ATOM 390 N ILE 41 4.522 41.183 9.072 1.00 0.00 N ATOM 391 CA ILE 41 5.787 40.790 7.631 1.00 0.00 C ATOM 392 C ILE 41 6.499 40.456 6.318 1.00 0.00 C ATOM 393 O ILE 41 6.044 39.599 5.560 1.00 0.00 O ATOM 395 CB ILE 41 6.679 39.583 7.976 1.00 0.00 C ATOM 396 CD1 ILE 41 8.260 38.679 9.761 1.00 0.00 C ATOM 397 CG1 ILE 41 7.533 39.886 9.209 1.00 0.00 C ATOM 398 CG2 ILE 41 7.532 39.190 6.779 1.00 0.00 C ATOM 399 N GLY 42 7.614 41.136 6.052 1.00 0.00 N ATOM 400 CA GLY 42 8.420 40.916 4.763 1.00 0.00 C ATOM 401 C GLY 42 9.148 39.572 4.828 1.00 0.00 C ATOM 402 O GLY 42 9.211 38.845 3.836 1.00 0.00 O ATOM 404 N ARG 43 9.698 39.244 5.997 1.00 0.00 N ATOM 405 CA ARG 43 9.968 37.726 6.208 1.00 0.00 C ATOM 406 C ARG 43 8.984 36.584 5.944 1.00 0.00 C ATOM 407 O ARG 43 9.080 35.899 4.924 1.00 0.00 O ATOM 409 CB ARG 43 10.370 37.449 7.658 1.00 0.00 C ATOM 410 CD ARG 43 11.169 35.803 9.375 1.00 0.00 C ATOM 412 NE ARG 43 11.439 34.400 9.682 1.00 0.00 N ATOM 413 CG ARG 43 10.694 35.992 7.944 1.00 0.00 C ATOM 414 CZ ARG 43 11.865 33.962 10.862 1.00 0.00 C ATOM 417 NH1 ARG 43 12.084 32.668 11.049 1.00 0.00 N ATOM 420 NH2 ARG 43 12.072 34.819 11.853 1.00 0.00 N ATOM 421 N SER 44 8.040 36.381 6.862 1.00 0.00 N ATOM 422 CA SER 44 7.030 35.294 6.723 1.00 0.00 C ATOM 423 C SER 44 6.514 36.504 5.943 1.00 0.00 C ATOM 424 O SER 44 6.898 37.640 6.223 1.00 0.00 O ATOM 426 CB SER 44 6.538 34.839 8.100 1.00 0.00 C ATOM 428 OG SER 44 5.792 35.861 8.737 1.00 0.00 O ATOM 429 N LYS 45 5.644 36.259 4.963 1.00 0.00 N ATOM 430 CA LYS 45 5.043 37.344 4.252 1.00 0.00 C ATOM 431 C LYS 45 3.754 37.392 5.074 1.00 0.00 C ATOM 432 O LYS 45 2.766 36.743 4.727 1.00 0.00 O ATOM 434 CB LYS 45 4.920 37.007 2.764 1.00 0.00 C ATOM 435 CD LYS 45 6.057 36.505 0.584 1.00 0.00 C ATOM 436 CE LYS 45 7.390 36.334 -0.127 1.00 0.00 C ATOM 437 CG LYS 45 6.253 36.839 2.053 1.00 0.00 C ATOM 441 NZ LYS 45 7.213 36.030 -1.573 1.00 0.00 N TER END