####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS110_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS110_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 3 - 37 4.92 8.31 LCS_AVERAGE: 76.86 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 7 - 16 1.92 19.48 LONGEST_CONTINUOUS_SEGMENT: 10 8 - 17 1.78 18.88 LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.83 12.07 LCS_AVERAGE: 18.75 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.83 12.07 LCS_AVERAGE: 14.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 3 30 3 3 3 3 3 6 8 12 19 22 25 29 32 35 37 38 39 40 40 40 LCS_GDT V 3 V 3 3 3 35 3 3 3 3 5 6 11 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT Q 4 Q 4 3 5 35 3 3 7 11 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT G 5 G 5 4 5 35 0 4 6 8 10 12 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT P 6 P 6 4 5 35 3 4 6 11 13 14 16 17 21 25 29 31 33 34 37 38 39 40 40 40 LCS_GDT W 7 W 7 4 10 35 3 4 6 10 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT V 8 V 8 9 10 35 3 4 6 9 9 10 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT G 9 G 9 9 10 35 3 8 8 10 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT S 10 S 10 9 10 35 3 8 8 9 9 12 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT S 11 S 11 9 10 35 5 8 8 9 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT Y 12 Y 12 9 10 35 5 8 8 9 9 10 12 14 20 24 28 31 33 35 37 38 39 40 40 40 LCS_GDT V 13 V 13 9 10 35 5 8 8 9 9 10 12 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT A 14 A 14 9 10 35 5 8 8 9 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT E 15 E 15 9 10 35 5 8 8 9 9 10 12 13 16 19 22 27 29 31 36 38 39 40 40 40 LCS_GDT T 16 T 16 9 10 35 4 8 8 9 9 10 12 13 13 15 17 24 28 31 32 35 38 40 40 40 LCS_GDT G 17 G 17 6 10 35 3 5 5 7 7 9 12 13 17 22 26 30 31 33 37 38 39 40 40 40 LCS_GDT Q 18 Q 18 6 6 35 3 4 5 7 7 7 9 17 20 24 29 31 33 35 37 38 39 40 40 40 LCS_GDT N 19 N 19 6 6 35 3 5 7 8 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT W 20 W 20 10 10 35 3 5 10 11 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT A 21 A 21 10 10 35 4 9 10 11 13 14 15 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT S 22 S 22 10 10 35 3 9 10 11 13 14 16 17 19 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT L 23 L 23 10 10 35 3 9 10 11 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT A 24 A 24 10 10 35 6 9 10 11 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT A 25 A 25 10 10 35 6 9 10 11 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT N 26 N 26 10 10 35 6 9 10 11 13 14 16 17 20 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT E 27 E 27 10 10 35 6 9 10 11 13 14 16 17 19 22 29 31 33 35 37 38 39 40 40 40 LCS_GDT L 28 L 28 10 10 35 6 9 10 11 13 14 16 17 19 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT R 29 R 29 10 10 35 6 9 10 11 13 14 16 17 18 22 26 28 33 35 37 38 39 40 40 40 LCS_GDT V 30 V 30 4 9 35 3 3 5 5 7 9 14 17 20 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT T 31 T 31 4 7 35 3 4 7 7 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT E 32 E 32 4 7 35 3 3 6 8 9 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT R 33 R 33 4 8 35 3 3 6 6 10 12 13 15 21 25 29 31 32 35 37 38 39 40 40 40 LCS_GDT P 34 P 34 4 8 35 3 4 6 7 10 12 13 15 21 25 29 31 32 35 37 38 39 40 40 40 LCS_GDT F 35 F 35 4 8 35 3 5 7 8 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT W 36 W 36 4 8 35 3 5 7 8 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT I 37 I 37 4 8 35 3 5 7 8 10 12 13 17 21 25 29 31 33 35 37 38 39 40 40 40 LCS_GDT S 38 S 38 4 8 32 3 4 6 7 8 10 12 15 19 22 25 29 33 35 37 38 39 40 40 40 LCS_GDT S 39 S 39 4 8 32 3 4 5 7 8 10 12 15 18 22 25 28 33 35 37 38 39 40 40 40 LCS_GDT F 40 F 40 4 8 32 3 4 5 6 8 10 11 12 16 20 22 26 29 33 36 37 39 40 40 40 LCS_GDT I 41 I 41 4 8 32 3 4 5 5 8 10 13 15 19 22 25 29 33 35 37 38 39 40 40 40 LCS_GDT G 42 G 42 3 7 32 3 3 4 4 6 10 11 13 17 19 22 25 28 31 32 33 34 36 37 39 LCS_GDT R 43 R 43 3 7 28 3 3 6 7 8 10 11 12 12 17 19 22 24 26 30 31 32 34 36 37 LCS_GDT S 44 S 44 3 7 27 3 3 6 7 8 10 11 12 12 17 18 21 24 25 27 29 32 33 34 35 LCS_GDT K 45 K 45 3 4 18 3 3 3 3 4 5 7 9 11 13 13 13 16 16 23 24 28 28 29 32 LCS_AVERAGE LCS_A: 36.69 ( 14.46 18.75 76.86 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 6 9 10 11 13 14 16 17 21 25 29 31 33 35 37 38 39 40 40 40 GDT PERCENT_AT 13.64 20.45 22.73 25.00 29.55 31.82 36.36 38.64 47.73 56.82 65.91 70.45 75.00 79.55 84.09 86.36 88.64 90.91 90.91 90.91 GDT RMS_LOCAL 0.41 0.63 0.83 1.25 1.66 1.80 2.27 2.29 3.42 3.77 4.06 4.22 4.66 4.87 5.08 5.22 5.35 5.51 5.51 5.51 GDT RMS_ALL_AT 12.26 11.84 12.07 10.25 9.61 9.32 8.95 9.04 8.70 8.54 8.40 8.30 7.73 7.54 7.68 7.69 7.60 7.63 7.63 7.63 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 11.521 0 0.435 0.446 13.000 0.000 0.000 - LGA V 3 V 3 5.946 0 0.564 0.806 9.010 1.364 0.779 6.353 LGA Q 4 Q 4 1.608 0 0.507 1.212 4.305 45.000 44.040 3.045 LGA G 5 G 5 3.650 0 0.443 0.443 4.082 18.182 18.182 - LGA P 6 P 6 2.722 0 0.240 0.489 5.722 42.727 24.675 5.722 LGA W 7 W 7 1.750 0 0.732 0.819 5.665 49.545 21.169 5.481 LGA V 8 V 8 3.480 0 0.654 1.509 6.002 17.273 10.649 6.002 LGA G 9 G 9 2.083 0 0.533 0.533 2.744 38.636 38.636 - LGA S 10 S 10 3.680 0 0.148 0.678 6.906 10.000 6.667 6.906 LGA S 11 S 11 7.765 0 0.260 0.546 9.993 0.000 0.000 9.655 LGA Y 12 Y 12 8.721 0 0.079 1.051 10.684 0.000 0.000 9.896 LGA V 13 V 13 7.741 0 0.058 0.053 10.096 0.000 0.000 6.299 LGA A 14 A 14 10.112 0 0.074 0.071 13.425 0.000 0.000 - LGA E 15 E 15 14.635 0 0.352 1.113 20.421 0.000 0.000 18.236 LGA T 16 T 16 15.822 0 0.404 1.169 17.129 0.000 0.000 13.263 LGA G 17 G 17 15.318 0 0.516 0.516 15.567 0.000 0.000 - LGA Q 18 Q 18 10.223 0 0.518 1.148 12.633 0.000 0.000 7.184 LGA N 19 N 19 7.399 0 0.372 0.998 13.187 0.000 0.000 10.946 LGA W 20 W 20 2.283 0 0.610 1.094 8.271 41.818 18.442 8.185 LGA A 21 A 21 2.350 0 0.090 0.096 3.066 38.182 34.182 - LGA S 22 S 22 2.259 0 0.281 0.676 4.503 47.727 36.667 4.503 LGA L 23 L 23 1.164 0 0.138 1.465 4.507 73.636 48.864 3.753 LGA A 24 A 24 1.397 0 0.192 0.195 2.237 69.545 63.273 - LGA A 25 A 25 1.817 0 0.037 0.035 2.809 58.182 52.000 - LGA N 26 N 26 1.672 0 0.097 0.118 2.721 54.545 43.636 2.639 LGA E 27 E 27 1.704 0 0.058 0.858 2.723 58.182 50.101 1.505 LGA L 28 L 28 1.018 0 0.249 1.408 4.230 73.636 60.455 4.230 LGA R 29 R 29 1.840 0 0.420 1.520 10.100 65.909 24.463 8.471 LGA V 30 V 30 5.179 0 0.306 1.255 9.196 9.545 5.455 8.066 LGA T 31 T 31 9.786 0 1.065 1.059 10.771 0.000 0.000 10.771 LGA E 32 E 32 12.645 0 0.670 1.665 15.834 0.000 0.000 14.880 LGA R 33 R 33 15.312 0 0.622 1.585 18.950 0.000 0.000 18.849 LGA P 34 P 34 15.514 0 0.380 0.522 19.198 0.000 0.000 19.198 LGA F 35 F 35 10.675 0 0.377 1.105 12.558 0.000 0.000 9.932 LGA W 36 W 36 10.779 0 0.491 0.347 18.820 0.000 0.000 18.820 LGA I 37 I 37 8.056 0 0.272 0.457 11.802 0.000 0.000 7.904 LGA S 38 S 38 8.878 0 0.155 0.628 10.459 0.000 0.000 9.002 LGA S 39 S 39 6.001 0 0.446 0.747 7.464 0.000 0.000 7.311 LGA F 40 F 40 7.472 0 0.148 1.003 12.643 0.000 0.000 12.643 LGA I 41 I 41 5.659 0 0.566 1.441 7.961 0.000 2.045 3.947 LGA G 42 G 42 11.520 0 0.280 0.280 13.636 0.000 0.000 - LGA R 43 R 43 12.676 0 0.720 1.368 15.211 0.000 0.000 15.211 LGA S 44 S 44 15.183 0 0.407 0.647 18.191 0.000 0.000 13.860 LGA K 45 K 45 20.007 0 0.652 0.603 26.081 0.000 0.000 26.081 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.215 7.189 8.457 18.492 13.736 3.584 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.29 42.614 37.742 0.712 LGA_LOCAL RMSD: 2.287 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 9.037 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.215 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.950867 * X + -0.238000 * Y + -0.198009 * Z + -15.455097 Y_new = 0.288190 * X + -0.446718 * Y + -0.846989 * Z + 48.276836 Z_new = 0.113129 * X + -0.862438 * Y + 0.493359 * Z + 21.604649 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.847312 -0.113372 -1.051181 [DEG: 163.1390 -6.4957 -60.2282 ] ZXZ: -0.229655 1.054849 3.011163 [DEG: -13.1583 60.4384 172.5269 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS110_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS110_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.29 37.742 7.21 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS110_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 12 N ALA 2 8.106 31.530 2.292 1.00 0.00 N ATOM 13 CA ALA 2 7.507 32.712 2.875 1.00 0.00 C ATOM 14 C ALA 2 7.895 32.404 4.323 1.00 0.00 C ATOM 15 O ALA 2 7.048 32.426 5.216 1.00 0.00 O ATOM 17 CB ALA 2 6.024 32.773 2.543 1.00 0.00 C ATOM 18 N VAL 3 9.176 32.114 4.551 1.00 0.00 N ATOM 19 CA VAL 3 9.564 32.716 5.985 1.00 0.00 C ATOM 20 C VAL 3 9.420 33.839 7.014 1.00 0.00 C ATOM 21 O VAL 3 8.687 33.700 7.994 1.00 0.00 O ATOM 23 CB VAL 3 11.088 32.883 6.134 1.00 0.00 C ATOM 24 CG1 VAL 3 11.418 33.623 7.421 1.00 0.00 C ATOM 25 CG2 VAL 3 11.777 31.528 6.101 1.00 0.00 C ATOM 26 N GLN 4 10.120 34.951 6.790 1.00 0.00 N ATOM 27 CA GLN 4 10.175 36.036 7.750 1.00 0.00 C ATOM 28 C GLN 4 8.902 35.939 6.907 1.00 0.00 C ATOM 29 O GLN 4 8.503 34.847 6.499 1.00 0.00 O ATOM 31 CB GLN 4 11.396 36.921 7.489 1.00 0.00 C ATOM 32 CD GLN 4 11.883 37.529 9.892 1.00 0.00 C ATOM 33 CG GLN 4 11.576 38.043 8.499 1.00 0.00 C ATOM 34 OE1 GLN 4 12.818 36.753 10.086 1.00 0.00 O ATOM 37 NE2 GLN 4 11.093 37.962 10.868 1.00 0.00 N ATOM 38 N GLY 5 8.266 37.082 6.648 1.00 0.00 N ATOM 39 CA GLY 5 6.761 37.158 6.324 1.00 0.00 C ATOM 40 C GLY 5 7.599 37.470 5.083 1.00 0.00 C ATOM 41 O GLY 5 7.423 38.516 4.456 1.00 0.00 O ATOM 43 N PRO 6 8.509 36.562 4.730 1.00 0.00 N ATOM 44 CA PRO 6 9.123 36.661 3.321 1.00 0.00 C ATOM 45 C PRO 6 8.260 36.706 2.058 1.00 0.00 C ATOM 46 O PRO 6 8.290 37.687 1.315 1.00 0.00 O ATOM 47 CB PRO 6 9.993 35.408 3.207 1.00 0.00 C ATOM 48 CD PRO 6 9.222 35.410 5.472 1.00 0.00 C ATOM 49 CG PRO 6 10.416 35.119 4.607 1.00 0.00 C ATOM 50 N TRP 7 7.493 35.643 1.818 1.00 0.00 N ATOM 51 CA TRP 7 6.586 35.625 0.679 1.00 0.00 C ATOM 52 C TRP 7 5.790 36.238 1.834 1.00 0.00 C ATOM 53 O TRP 7 6.308 36.384 2.941 1.00 0.00 O ATOM 55 CB TRP 7 6.423 34.200 0.148 1.00 0.00 C ATOM 58 CG TRP 7 5.574 34.113 -1.084 1.00 0.00 C ATOM 59 CD1 TRP 7 5.994 34.231 -2.378 1.00 0.00 C ATOM 61 NE1 TRP 7 4.930 34.095 -3.237 1.00 0.00 N ATOM 62 CD2 TRP 7 4.159 33.890 -1.139 1.00 0.00 C ATOM 63 CE2 TRP 7 3.792 33.885 -2.497 1.00 0.00 C ATOM 64 CH2 TRP 7 1.528 33.502 -1.947 1.00 0.00 C ATOM 65 CZ2 TRP 7 2.476 33.692 -2.913 1.00 0.00 C ATOM 66 CE3 TRP 7 3.170 33.694 -0.172 1.00 0.00 C ATOM 67 CZ3 TRP 7 1.866 33.503 -0.589 1.00 0.00 C ATOM 68 N VAL 8 4.534 36.595 1.572 1.00 0.00 N ATOM 69 CA VAL 8 3.912 37.844 2.206 1.00 0.00 C ATOM 70 C VAL 8 3.480 36.379 2.108 1.00 0.00 C ATOM 71 O VAL 8 2.286 36.079 2.104 1.00 0.00 O ATOM 73 CB VAL 8 3.715 38.965 1.169 1.00 0.00 C ATOM 74 CG1 VAL 8 5.059 39.446 0.643 1.00 0.00 C ATOM 75 CG2 VAL 8 2.833 38.486 0.027 1.00 0.00 C ATOM 76 N GLY 9 4.453 35.472 2.029 1.00 0.00 N ATOM 77 CA GLY 9 3.855 34.258 3.370 1.00 0.00 C ATOM 78 C GLY 9 3.450 33.190 4.387 1.00 0.00 C ATOM 79 O GLY 9 2.857 32.173 4.025 1.00 0.00 O ATOM 81 N SER 10 3.772 33.422 5.660 1.00 0.00 N ATOM 82 CA SER 10 3.272 32.543 6.681 1.00 0.00 C ATOM 83 C SER 10 1.780 32.454 7.005 1.00 0.00 C ATOM 84 O SER 10 1.197 31.369 6.982 1.00 0.00 O ATOM 86 CB SER 10 3.929 32.856 8.027 1.00 0.00 C ATOM 88 OG SER 10 3.436 32.005 9.047 1.00 0.00 O ATOM 89 N SER 11 1.164 33.597 7.310 1.00 0.00 N ATOM 90 CA SER 11 -0.399 33.578 7.010 1.00 0.00 C ATOM 91 C SER 11 -1.420 33.321 5.900 1.00 0.00 C ATOM 92 O SER 11 -2.500 32.786 6.155 1.00 0.00 O ATOM 94 CB SER 11 -1.021 34.940 7.326 1.00 0.00 C ATOM 96 OG SER 11 -0.961 35.218 8.714 1.00 0.00 O ATOM 97 N TYR 12 -1.079 33.706 4.671 1.00 0.00 N ATOM 98 CA TYR 12 -1.955 33.514 3.587 1.00 0.00 C ATOM 99 C TYR 12 -2.135 32.004 3.418 1.00 0.00 C ATOM 100 O TYR 12 -3.250 31.527 3.203 1.00 0.00 O ATOM 102 CB TYR 12 -1.399 34.175 2.325 1.00 0.00 C ATOM 103 CG TYR 12 -2.286 34.018 1.110 1.00 0.00 C ATOM 105 OH TYR 12 -4.734 33.601 -2.225 1.00 0.00 O ATOM 106 CZ TYR 12 -3.923 33.737 -1.122 1.00 0.00 C ATOM 107 CD1 TYR 12 -3.414 34.812 0.946 1.00 0.00 C ATOM 108 CE1 TYR 12 -4.229 34.676 -0.162 1.00 0.00 C ATOM 109 CD2 TYR 12 -1.992 33.077 0.131 1.00 0.00 C ATOM 110 CE2 TYR 12 -2.797 32.927 -0.982 1.00 0.00 C ATOM 111 N VAL 13 -1.037 31.255 3.515 1.00 0.00 N ATOM 112 CA VAL 13 -1.082 29.883 3.301 1.00 0.00 C ATOM 113 C VAL 13 -1.915 29.318 4.453 1.00 0.00 C ATOM 114 O VAL 13 -2.709 28.397 4.257 1.00 0.00 O ATOM 116 CB VAL 13 0.332 29.276 3.232 1.00 0.00 C ATOM 117 CG1 VAL 13 0.258 27.758 3.175 1.00 0.00 C ATOM 118 CG2 VAL 13 1.087 29.822 2.029 1.00 0.00 C ATOM 119 N ALA 14 -1.732 29.871 5.652 1.00 0.00 N ATOM 120 CA ALA 14 -2.410 29.362 6.870 1.00 0.00 C ATOM 121 C ALA 14 -3.861 29.839 6.782 1.00 0.00 C ATOM 122 O ALA 14 -4.761 29.207 7.337 1.00 0.00 O ATOM 124 CB ALA 14 -1.702 29.862 8.120 1.00 0.00 C ATOM 125 N GLU 15 -4.086 30.953 6.086 1.00 0.00 N ATOM 126 CA GLU 15 -5.471 31.258 5.724 1.00 0.00 C ATOM 127 C GLU 15 -6.275 30.744 4.529 1.00 0.00 C ATOM 128 O GLU 15 -7.189 31.418 4.052 1.00 0.00 O ATOM 130 CB GLU 15 -5.658 32.766 5.549 1.00 0.00 C ATOM 131 CD GLU 15 -8.041 32.895 6.378 1.00 0.00 C ATOM 132 CG GLU 15 -7.086 33.182 5.235 1.00 0.00 C ATOM 133 OE1 GLU 15 -7.570 32.758 7.526 1.00 0.00 O ATOM 134 OE2 GLU 15 -9.261 32.808 6.124 1.00 0.00 O ATOM 135 N THR 16 -5.933 29.550 4.045 1.00 0.00 N ATOM 136 CA THR 16 -6.702 28.928 2.940 1.00 0.00 C ATOM 137 C THR 16 -8.161 28.761 3.367 1.00 0.00 C ATOM 138 O THR 16 -8.966 29.682 3.221 1.00 0.00 O ATOM 140 CB THR 16 -6.105 27.568 2.533 1.00 0.00 C ATOM 142 OG1 THR 16 -4.762 27.752 2.071 1.00 0.00 O ATOM 143 CG2 THR 16 -6.923 26.940 1.415 1.00 0.00 C ATOM 144 N GLY 17 -8.500 27.584 3.894 1.00 0.00 N ATOM 145 CA GLY 17 -9.683 27.795 5.031 1.00 0.00 C ATOM 146 C GLY 17 -10.477 28.464 6.155 1.00 0.00 C ATOM 147 O GLY 17 -11.029 29.550 5.971 1.00 0.00 O ATOM 149 N GLN 18 -10.533 27.815 7.318 1.00 0.00 N ATOM 150 CA GLN 18 -9.939 29.333 8.494 1.00 0.00 C ATOM 151 C GLN 18 -8.996 30.463 8.913 1.00 0.00 C ATOM 152 O GLN 18 -8.078 30.819 8.174 1.00 0.00 O ATOM 154 CB GLN 18 -9.773 28.858 9.938 1.00 0.00 C ATOM 155 CD GLN 18 -10.868 27.961 12.031 1.00 0.00 C ATOM 156 CG GLN 18 -11.073 28.439 10.608 1.00 0.00 C ATOM 157 OE1 GLN 18 -9.930 27.217 12.318 1.00 0.00 O ATOM 160 NE2 GLN 18 -11.746 28.390 12.930 1.00 0.00 N ATOM 161 N ASN 19 -9.226 31.024 10.101 1.00 0.00 N ATOM 162 CA ASN 19 -8.081 31.759 10.682 1.00 0.00 C ATOM 163 C ASN 19 -6.868 31.371 11.530 1.00 0.00 C ATOM 164 O ASN 19 -6.431 32.141 12.386 1.00 0.00 O ATOM 166 CB ASN 19 -8.574 32.893 11.583 1.00 0.00 C ATOM 167 CG ASN 19 -9.321 32.386 12.800 1.00 0.00 C ATOM 168 OD1 ASN 19 -9.888 31.294 12.782 1.00 0.00 O ATOM 171 ND2 ASN 19 -9.324 33.181 13.864 1.00 0.00 N ATOM 172 N TRP 20 -6.326 30.177 11.291 1.00 0.00 N ATOM 173 CA TRP 20 -5.126 29.778 11.976 1.00 0.00 C ATOM 174 C TRP 20 -3.919 30.667 11.670 1.00 0.00 C ATOM 175 O TRP 20 -3.182 31.055 12.577 1.00 0.00 O ATOM 177 CB TRP 20 -4.769 28.331 11.630 1.00 0.00 C ATOM 180 CG TRP 20 -5.663 27.321 12.281 1.00 0.00 C ATOM 181 CD1 TRP 20 -6.601 27.556 13.244 1.00 0.00 C ATOM 183 NE1 TRP 20 -7.224 26.383 13.596 1.00 0.00 N ATOM 184 CD2 TRP 20 -5.703 25.913 12.017 1.00 0.00 C ATOM 185 CE2 TRP 20 -6.688 25.359 12.855 1.00 0.00 C ATOM 186 CH2 TRP 20 -6.289 23.194 12.002 1.00 0.00 C ATOM 187 CZ2 TRP 20 -6.990 23.999 12.856 1.00 0.00 C ATOM 188 CE3 TRP 20 -5.001 25.066 11.153 1.00 0.00 C ATOM 189 CZ3 TRP 20 -5.303 23.718 11.157 1.00 0.00 C ATOM 190 N ALA 21 -3.721 30.988 10.392 1.00 0.00 N ATOM 191 CA ALA 21 -2.599 31.835 9.985 1.00 0.00 C ATOM 192 C ALA 21 -2.809 33.080 10.850 1.00 0.00 C ATOM 193 O ALA 21 -1.852 33.631 11.396 1.00 0.00 O ATOM 195 CB ALA 21 -2.640 32.086 8.486 1.00 0.00 C ATOM 196 N SER 22 -4.062 33.520 10.972 1.00 0.00 N ATOM 197 CA SER 22 -4.365 34.970 11.106 1.00 0.00 C ATOM 198 C SER 22 -4.228 34.479 12.549 1.00 0.00 C ATOM 199 O SER 22 -3.942 35.263 13.454 1.00 0.00 O ATOM 201 CB SER 22 -5.687 35.307 10.414 1.00 0.00 C ATOM 203 OG SER 22 -5.602 35.087 9.017 1.00 0.00 O ATOM 204 N LEU 23 -4.436 33.179 12.761 1.00 0.00 N ATOM 205 CA LEU 23 -3.848 32.592 14.088 1.00 0.00 C ATOM 206 C LEU 23 -2.431 32.842 14.607 1.00 0.00 C ATOM 207 O LEU 23 -2.250 33.310 15.732 1.00 0.00 O ATOM 209 CB LEU 23 -3.923 31.064 14.078 1.00 0.00 C ATOM 210 CG LEU 23 -3.358 30.349 15.307 1.00 0.00 C ATOM 211 CD1 LEU 23 -4.121 30.749 16.559 1.00 0.00 C ATOM 212 CD2 LEU 23 -3.402 28.840 15.118 1.00 0.00 C ATOM 213 N ALA 24 -1.429 32.529 13.788 1.00 0.00 N ATOM 214 CA ALA 24 -0.173 32.328 14.249 1.00 0.00 C ATOM 215 C ALA 24 -0.033 33.844 14.408 1.00 0.00 C ATOM 216 O ALA 24 0.663 34.317 15.307 1.00 0.00 O ATOM 218 CB ALA 24 0.655 31.572 13.222 1.00 0.00 C ATOM 219 N ALA 25 -0.696 34.601 13.534 1.00 0.00 N ATOM 220 CA ALA 25 -0.597 36.026 13.559 1.00 0.00 C ATOM 221 C ALA 25 -1.319 36.559 14.799 1.00 0.00 C ATOM 222 O ALA 25 -0.838 37.487 15.451 1.00 0.00 O ATOM 224 CB ALA 25 -1.180 36.621 12.286 1.00 0.00 C ATOM 225 N ASN 26 -2.471 35.972 15.120 1.00 0.00 N ATOM 226 CA ASN 26 -3.152 36.285 16.507 1.00 0.00 C ATOM 227 C ASN 26 -2.332 36.008 17.769 1.00 0.00 C ATOM 228 O ASN 26 -2.153 36.893 18.607 1.00 0.00 O ATOM 230 CB ASN 26 -4.467 35.515 16.644 1.00 0.00 C ATOM 231 CG ASN 26 -5.568 36.083 15.771 1.00 0.00 C ATOM 232 OD1 ASN 26 -5.488 37.225 15.317 1.00 0.00 O ATOM 235 ND2 ASN 26 -6.604 35.287 15.533 1.00 0.00 N ATOM 236 N GLU 27 -1.836 34.778 17.902 1.00 0.00 N ATOM 237 CA GLU 27 -0.995 34.450 19.021 1.00 0.00 C ATOM 238 C GLU 27 0.336 35.205 19.000 1.00 0.00 C ATOM 239 O GLU 27 0.839 35.615 20.048 1.00 0.00 O ATOM 241 CB GLU 27 -0.719 32.946 19.062 1.00 0.00 C ATOM 242 CD GLU 27 -1.639 30.615 19.382 1.00 0.00 C ATOM 243 CG GLU 27 -1.935 32.102 19.410 1.00 0.00 C ATOM 244 OE1 GLU 27 -0.547 30.235 18.908 1.00 0.00 O ATOM 245 OE2 GLU 27 -2.499 29.830 19.833 1.00 0.00 O ATOM 246 N LEU 28 0.904 35.386 17.808 1.00 0.00 N ATOM 247 CA LEU 28 2.062 36.122 17.713 1.00 0.00 C ATOM 248 C LEU 28 1.907 37.601 18.074 1.00 0.00 C ATOM 249 O LEU 28 2.743 38.163 18.783 1.00 0.00 O ATOM 251 CB LEU 28 2.638 36.034 16.298 1.00 0.00 C ATOM 252 CG LEU 28 3.953 36.776 16.053 1.00 0.00 C ATOM 253 CD1 LEU 28 5.045 36.255 16.975 1.00 0.00 C ATOM 254 CD2 LEU 28 4.382 36.648 14.600 1.00 0.00 C ATOM 255 N ARG 29 0.837 38.228 17.585 1.00 0.00 N ATOM 256 CA ARG 29 0.545 39.569 18.021 1.00 0.00 C ATOM 257 C ARG 29 0.074 39.925 19.433 1.00 0.00 C ATOM 258 O ARG 29 0.679 40.766 20.101 1.00 0.00 O ATOM 260 CB ARG 29 -0.531 40.199 17.136 1.00 0.00 C ATOM 261 CD ARG 29 0.667 39.878 14.954 1.00 0.00 C ATOM 263 NE ARG 29 1.029 40.480 13.672 1.00 0.00 N ATOM 264 CG ARG 29 0.010 40.880 15.889 1.00 0.00 C ATOM 265 CZ ARG 29 1.574 39.814 12.661 1.00 0.00 C ATOM 268 NH1 ARG 29 1.869 40.445 11.533 1.00 0.00 N ATOM 271 NH2 ARG 29 1.824 38.517 12.779 1.00 0.00 N ATOM 272 N VAL 30 -1.004 39.287 19.885 1.00 0.00 N ATOM 273 CA VAL 30 -0.897 39.057 21.564 1.00 0.00 C ATOM 274 C VAL 30 -0.632 37.907 22.537 1.00 0.00 C ATOM 275 O VAL 30 -1.267 36.856 22.452 1.00 0.00 O ATOM 277 CB VAL 30 -2.189 39.499 22.277 1.00 0.00 C ATOM 278 CG1 VAL 30 -3.384 38.722 21.744 1.00 0.00 C ATOM 279 CG2 VAL 30 -2.057 39.313 23.781 1.00 0.00 C ATOM 280 N THR 31 0.307 38.109 23.462 1.00 0.00 N ATOM 281 CA THR 31 1.230 37.011 23.832 1.00 0.00 C ATOM 282 C THR 31 -0.270 37.303 23.896 1.00 0.00 C ATOM 283 O THR 31 -0.805 38.021 23.050 1.00 0.00 O ATOM 285 CB THR 31 2.315 37.494 24.813 1.00 0.00 C ATOM 287 OG1 THR 31 1.702 37.934 26.030 1.00 0.00 O ATOM 288 CG2 THR 31 3.096 38.654 24.214 1.00 0.00 C ATOM 289 N GLU 32 -0.948 36.746 24.900 1.00 0.00 N ATOM 290 CA GLU 32 -2.095 38.107 25.515 1.00 0.00 C ATOM 291 C GLU 32 -2.773 39.434 25.864 1.00 0.00 C ATOM 292 O GLU 32 -3.828 39.760 25.318 1.00 0.00 O ATOM 294 CB GLU 32 -2.304 37.992 27.026 1.00 0.00 C ATOM 295 CD GLU 32 -3.500 38.829 29.086 1.00 0.00 C ATOM 296 CG GLU 32 -3.269 39.016 27.600 1.00 0.00 C ATOM 297 OE1 GLU 32 -2.885 37.914 29.673 1.00 0.00 O ATOM 298 OE2 GLU 32 -4.297 39.597 29.665 1.00 0.00 O ATOM 299 N ARG 33 -2.166 40.197 26.772 1.00 0.00 N ATOM 300 CA ARG 33 -2.792 41.395 27.348 1.00 0.00 C ATOM 301 C ARG 33 -2.376 42.551 26.436 1.00 0.00 C ATOM 302 O ARG 33 -3.164 43.462 26.180 1.00 0.00 O ATOM 304 CB ARG 33 -2.348 41.587 28.800 1.00 0.00 C ATOM 305 CD ARG 33 -2.620 42.825 30.966 1.00 0.00 C ATOM 307 NE ARG 33 -3.181 43.996 31.635 1.00 0.00 N ATOM 308 CG ARG 33 -2.986 42.780 29.492 1.00 0.00 C ATOM 309 CZ ARG 33 -2.991 44.287 32.918 1.00 0.00 C ATOM 312 NH1 ARG 33 -3.542 45.374 33.439 1.00 0.00 N ATOM 315 NH2 ARG 33 -2.250 43.490 33.675 1.00 0.00 N ATOM 316 N PRO 34 -1.136 42.513 25.949 1.00 0.00 N ATOM 317 CA PRO 34 -1.509 42.848 24.157 1.00 0.00 C ATOM 318 C PRO 34 -1.767 42.113 22.840 1.00 0.00 C ATOM 319 O PRO 34 -1.053 41.169 22.499 1.00 0.00 O ATOM 320 CB PRO 34 -0.309 43.666 23.676 1.00 0.00 C ATOM 321 CD PRO 34 0.220 42.885 25.875 1.00 0.00 C ATOM 322 CG PRO 34 0.821 43.214 24.538 1.00 0.00 C ATOM 323 N PHE 35 -2.788 42.547 22.101 1.00 0.00 N ATOM 324 CA PHE 35 -2.369 42.396 20.422 1.00 0.00 C ATOM 325 C PHE 35 -1.846 43.325 19.324 1.00 0.00 C ATOM 326 O PHE 35 -2.553 44.233 18.884 1.00 0.00 O ATOM 328 CB PHE 35 -3.561 41.877 19.616 1.00 0.00 C ATOM 329 CG PHE 35 -3.949 40.465 19.950 1.00 0.00 C ATOM 330 CZ PHE 35 -4.664 37.850 20.564 1.00 0.00 C ATOM 331 CD1 PHE 35 -4.818 40.200 20.995 1.00 0.00 C ATOM 332 CE1 PHE 35 -5.175 38.901 21.303 1.00 0.00 C ATOM 333 CD2 PHE 35 -3.447 39.402 19.221 1.00 0.00 C ATOM 334 CE2 PHE 35 -3.804 38.104 19.529 1.00 0.00 C ATOM 335 N TRP 36 -0.610 43.097 18.883 1.00 0.00 N ATOM 336 CA TRP 36 -0.027 43.905 17.794 1.00 0.00 C ATOM 337 C TRP 36 -0.264 43.167 16.475 1.00 0.00 C ATOM 338 O TRP 36 0.520 43.301 15.534 1.00 0.00 O ATOM 340 CB TRP 36 1.462 44.149 18.047 1.00 0.00 C ATOM 343 CG TRP 36 1.735 45.006 19.245 1.00 0.00 C ATOM 344 CD1 TRP 36 2.308 44.613 20.420 1.00 0.00 C ATOM 346 NE1 TRP 36 2.394 45.677 21.285 1.00 0.00 N ATOM 347 CD2 TRP 36 1.447 46.402 19.385 1.00 0.00 C ATOM 348 CE2 TRP 36 1.871 46.787 20.670 1.00 0.00 C ATOM 349 CH2 TRP 36 1.174 49.013 20.302 1.00 0.00 C ATOM 350 CZ2 TRP 36 1.739 48.093 21.140 1.00 0.00 C ATOM 351 CE3 TRP 36 0.872 47.364 18.549 1.00 0.00 C ATOM 352 CZ3 TRP 36 0.743 48.657 19.019 1.00 0.00 C ATOM 353 N ILE 37 -1.344 42.390 16.408 1.00 0.00 N ATOM 354 CA ILE 37 -1.914 42.126 14.887 1.00 0.00 C ATOM 355 C ILE 37 -2.233 43.030 13.694 1.00 0.00 C ATOM 356 O ILE 37 -1.522 43.014 12.689 1.00 0.00 O ATOM 358 CB ILE 37 -3.273 41.403 14.911 1.00 0.00 C ATOM 359 CD1 ILE 37 -4.775 39.884 13.518 1.00 0.00 C ATOM 360 CG1 ILE 37 -3.605 40.845 13.526 1.00 0.00 C ATOM 361 CG2 ILE 37 -4.363 42.332 15.424 1.00 0.00 C ATOM 362 N SER 38 -3.304 43.816 13.808 1.00 0.00 N ATOM 363 CA SER 38 -3.533 44.834 12.803 1.00 0.00 C ATOM 364 C SER 38 -2.830 46.179 12.613 1.00 0.00 C ATOM 365 O SER 38 -2.464 46.542 11.495 1.00 0.00 O ATOM 367 CB SER 38 -4.989 45.304 12.840 1.00 0.00 C ATOM 369 OG SER 38 -5.224 46.311 11.870 1.00 0.00 O ATOM 370 N SER 39 -2.642 46.916 13.707 1.00 0.00 N ATOM 371 CA SER 39 -0.965 47.634 13.549 1.00 0.00 C ATOM 372 C SER 39 0.518 47.830 13.226 1.00 0.00 C ATOM 373 O SER 39 0.871 48.656 12.384 1.00 0.00 O ATOM 375 CB SER 39 -0.424 48.040 14.922 1.00 0.00 C ATOM 377 OG SER 39 -1.186 49.098 15.477 1.00 0.00 O ATOM 378 N PHE 40 1.383 47.070 13.898 1.00 0.00 N ATOM 379 CA PHE 40 2.775 47.121 13.578 1.00 0.00 C ATOM 380 C PHE 40 2.962 46.794 12.096 1.00 0.00 C ATOM 381 O PHE 40 3.534 47.587 11.346 1.00 0.00 O ATOM 383 CB PHE 40 3.564 46.152 14.460 1.00 0.00 C ATOM 384 CG PHE 40 5.034 46.118 14.159 1.00 0.00 C ATOM 385 CZ PHE 40 7.756 46.050 13.598 1.00 0.00 C ATOM 386 CD1 PHE 40 5.876 47.110 14.632 1.00 0.00 C ATOM 387 CE1 PHE 40 7.229 47.079 14.355 1.00 0.00 C ATOM 388 CD2 PHE 40 5.577 45.094 13.404 1.00 0.00 C ATOM 389 CE2 PHE 40 6.931 45.064 13.126 1.00 0.00 C ATOM 390 N ILE 41 2.479 45.624 11.674 1.00 0.00 N ATOM 391 CA ILE 41 2.829 45.002 10.312 1.00 0.00 C ATOM 392 C ILE 41 1.890 45.926 9.534 1.00 0.00 C ATOM 393 O ILE 41 2.014 46.063 8.315 1.00 0.00 O ATOM 395 CB ILE 41 2.554 43.487 10.296 1.00 0.00 C ATOM 396 CD1 ILE 41 4.764 42.914 9.162 1.00 0.00 C ATOM 397 CG1 ILE 41 3.254 42.829 9.106 1.00 0.00 C ATOM 398 CG2 ILE 41 1.057 43.217 10.292 1.00 0.00 C ATOM 399 N GLY 42 0.954 46.561 10.239 1.00 0.00 N ATOM 400 CA GLY 42 0.026 47.406 9.610 1.00 0.00 C ATOM 401 C GLY 42 0.742 48.656 9.098 1.00 0.00 C ATOM 402 O GLY 42 0.702 48.956 7.903 1.00 0.00 O ATOM 404 N ARG 43 1.397 49.385 10.002 1.00 0.00 N ATOM 405 CA ARG 43 2.557 50.235 9.401 1.00 0.00 C ATOM 406 C ARG 43 4.037 50.197 9.017 1.00 0.00 C ATOM 407 O ARG 43 4.571 51.169 8.482 1.00 0.00 O ATOM 409 CB ARG 43 2.775 51.504 10.228 1.00 0.00 C ATOM 410 CD ARG 43 1.884 53.702 11.048 1.00 0.00 C ATOM 412 NE ARG 43 2.994 54.494 10.524 1.00 0.00 N ATOM 413 CG ARG 43 1.607 52.476 10.193 1.00 0.00 C ATOM 414 CZ ARG 43 3.608 55.460 11.202 1.00 0.00 C ATOM 417 NH1 ARG 43 4.609 56.127 10.644 1.00 0.00 N ATOM 420 NH2 ARG 43 3.220 55.754 12.434 1.00 0.00 N ATOM 421 N SER 44 4.698 49.072 9.291 1.00 0.00 N ATOM 422 CA SER 44 5.786 48.812 8.044 1.00 0.00 C ATOM 423 C SER 44 5.695 48.908 6.520 1.00 0.00 C ATOM 424 O SER 44 5.270 49.933 5.982 1.00 0.00 O ATOM 426 CB SER 44 6.339 47.387 8.104 1.00 0.00 C ATOM 428 OG SER 44 5.322 46.433 7.850 1.00 0.00 O ATOM 429 N LYS 45 6.094 47.843 5.826 1.00 0.00 N ATOM 430 CA LYS 45 6.048 47.819 4.339 1.00 0.00 C ATOM 431 C LYS 45 4.730 47.424 3.671 1.00 0.00 C ATOM 432 O LYS 45 4.360 47.982 2.637 1.00 0.00 O ATOM 434 CB LYS 45 7.113 46.870 3.786 1.00 0.00 C ATOM 435 CD LYS 45 8.331 45.959 1.789 1.00 0.00 C ATOM 436 CE LYS 45 8.396 45.917 0.272 1.00 0.00 C ATOM 437 CG LYS 45 7.179 46.828 2.268 1.00 0.00 C ATOM 441 NZ LYS 45 9.520 45.069 -0.213 1.00 0.00 N TER END