####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS097_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 27 18 - 44 4.67 10.69 LCS_AVERAGE: 53.77 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 6 - 18 1.71 21.29 LONGEST_CONTINUOUS_SEGMENT: 13 7 - 19 1.93 21.53 LONGEST_CONTINUOUS_SEGMENT: 13 19 - 31 1.99 10.39 LCS_AVERAGE: 22.26 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 7 - 17 0.92 21.58 LCS_AVERAGE: 15.75 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 13 3 3 3 4 5 6 7 8 10 13 15 17 23 24 26 29 32 33 36 37 LCS_GDT V 3 V 3 3 5 13 3 3 3 4 6 6 7 8 10 12 14 17 20 22 23 23 26 31 34 37 LCS_GDT Q 4 Q 4 4 5 18 3 3 4 4 6 6 7 8 10 13 15 19 21 27 30 32 35 36 38 39 LCS_GDT G 5 G 5 4 5 19 2 3 4 4 6 7 9 13 15 19 20 23 27 28 30 33 35 36 38 39 LCS_GDT P 6 P 6 4 13 19 2 4 6 8 12 13 14 16 18 19 20 23 27 28 30 33 35 36 38 39 LCS_GDT W 7 W 7 11 13 19 4 7 11 12 12 13 14 16 18 19 20 23 27 28 30 33 35 36 38 39 LCS_GDT V 8 V 8 11 13 19 4 8 11 12 12 12 12 13 14 19 20 23 25 28 30 33 35 36 38 39 LCS_GDT G 9 G 9 11 13 19 4 8 11 12 12 12 12 16 18 19 20 23 27 28 30 33 35 36 38 39 LCS_GDT S 10 S 10 11 13 19 4 7 11 12 12 12 12 16 18 19 20 23 27 28 30 33 35 36 38 39 LCS_GDT S 11 S 11 11 13 19 5 8 11 12 12 12 12 13 14 17 20 23 25 28 30 33 35 36 38 39 LCS_GDT Y 12 Y 12 11 13 19 4 8 11 12 12 12 12 13 14 15 19 23 25 28 30 32 35 36 38 39 LCS_GDT V 13 V 13 11 13 19 5 8 11 12 12 12 12 13 15 19 20 23 25 28 30 33 35 36 38 39 LCS_GDT A 14 A 14 11 13 19 5 8 11 12 12 12 12 13 14 15 15 21 24 28 30 32 35 36 38 39 LCS_GDT E 15 E 15 11 13 19 5 8 11 12 12 12 12 13 14 15 15 16 18 19 20 21 32 32 35 36 LCS_GDT T 16 T 16 11 13 19 5 8 11 12 12 12 12 13 14 15 15 20 22 25 28 29 32 34 36 38 LCS_GDT G 17 G 17 11 13 26 3 5 11 12 12 12 12 13 15 19 20 23 25 28 30 33 35 36 38 39 LCS_GDT Q 18 Q 18 8 13 27 3 5 9 12 12 12 12 13 16 19 20 23 27 28 30 33 35 36 38 39 LCS_GDT N 19 N 19 4 13 27 3 4 5 6 9 11 15 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT W 20 W 20 9 13 27 7 8 9 11 13 15 17 18 19 20 21 23 27 27 29 32 34 36 38 39 LCS_GDT A 21 A 21 9 13 27 7 8 9 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT S 22 S 22 9 13 27 7 8 9 11 12 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT L 23 L 23 9 13 27 7 8 9 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT A 24 A 24 9 13 27 7 8 9 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT A 25 A 25 9 13 27 7 8 9 10 12 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT N 26 N 26 9 13 27 7 8 9 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT E 27 E 27 9 13 27 4 8 9 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT L 28 L 28 9 13 27 4 6 9 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT R 29 R 29 6 13 27 4 6 8 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT V 30 V 30 6 13 27 4 6 7 11 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT T 31 T 31 6 13 27 4 6 7 11 13 15 17 18 19 20 21 23 25 27 29 33 35 36 38 39 LCS_GDT E 32 E 32 3 5 27 3 3 4 7 9 13 16 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT R 33 R 33 3 5 27 3 4 4 7 8 10 11 13 16 19 21 23 27 28 30 33 35 36 38 39 LCS_GDT P 34 P 34 3 5 27 4 4 4 7 8 10 11 13 16 19 21 23 25 28 30 33 35 36 38 39 LCS_GDT F 35 F 35 3 5 27 4 4 4 7 8 10 11 14 17 19 21 23 27 28 30 33 35 36 38 39 LCS_GDT W 36 W 36 5 5 27 4 4 5 5 6 8 10 12 16 18 21 23 25 28 30 33 35 36 38 39 LCS_GDT I 37 I 37 5 5 27 4 4 5 5 5 7 9 12 13 16 19 23 24 26 26 31 34 36 37 39 LCS_GDT S 38 S 38 5 5 27 4 4 5 5 5 5 6 7 9 13 15 23 25 27 30 33 35 36 38 39 LCS_GDT S 39 S 39 5 6 27 4 4 5 5 7 11 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT F 40 F 40 5 6 27 3 4 5 8 10 11 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT I 41 I 41 4 6 27 3 4 5 10 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 LCS_GDT G 42 G 42 4 6 27 3 4 7 10 13 15 17 18 19 20 21 22 27 28 30 33 35 36 38 39 LCS_GDT R 43 R 43 4 6 27 3 4 5 10 13 15 17 18 19 20 21 22 27 28 30 33 35 36 38 39 LCS_GDT S 44 S 44 3 6 27 0 3 3 3 6 8 11 16 19 20 21 22 27 27 29 32 33 35 38 39 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 3 3 4 6 9 9 11 12 13 13 14 14 18 18 28 31 LCS_AVERAGE LCS_A: 30.60 ( 15.75 22.26 53.77 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 8 11 12 13 15 17 18 19 20 21 23 27 28 30 33 35 36 38 39 GDT PERCENT_AT 15.91 18.18 25.00 27.27 29.55 34.09 38.64 40.91 43.18 45.45 47.73 52.27 61.36 63.64 68.18 75.00 79.55 81.82 86.36 88.64 GDT RMS_LOCAL 0.12 0.40 0.92 1.19 1.73 1.94 2.20 2.46 2.65 2.87 3.52 4.24 4.80 4.90 5.18 5.56 5.78 5.89 6.16 6.29 GDT RMS_ALL_AT 11.84 11.68 21.58 21.58 11.99 11.93 12.40 11.80 11.41 11.22 10.78 7.74 8.23 7.67 7.65 7.57 7.51 7.47 7.49 7.50 # Checking swapping # possible swapping detected: Y 12 Y 12 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 24.063 0 0.038 0.062 25.648 0.000 0.000 - LGA V 3 V 3 20.906 0 0.021 0.047 22.406 0.000 0.000 19.911 LGA Q 4 Q 4 17.449 0 0.396 0.327 20.977 0.000 0.000 20.977 LGA G 5 G 5 14.033 0 0.073 0.073 15.872 0.000 0.000 - LGA P 6 P 6 14.158 0 0.670 0.582 16.092 0.000 0.000 15.879 LGA W 7 W 7 16.885 0 0.372 1.077 20.809 0.000 0.000 20.435 LGA V 8 V 8 17.124 0 0.030 1.003 18.659 0.000 0.000 17.943 LGA G 9 G 9 14.148 0 0.123 0.123 15.225 0.000 0.000 - LGA S 10 S 10 14.818 0 0.164 0.576 16.101 0.000 0.000 14.407 LGA S 11 S 11 18.087 0 0.019 0.113 19.905 0.000 0.000 19.905 LGA Y 12 Y 12 17.878 0 0.058 0.998 17.878 0.000 0.000 16.621 LGA V 13 V 13 14.998 0 0.074 1.107 16.195 0.000 0.000 14.529 LGA A 14 A 14 18.775 0 0.028 0.035 20.928 0.000 0.000 - LGA E 15 E 15 22.080 0 0.016 1.158 28.020 0.000 0.000 26.663 LGA T 16 T 16 19.854 0 0.047 0.104 20.309 0.000 0.000 16.939 LGA G 17 G 17 16.523 0 0.223 0.223 17.721 0.000 0.000 - LGA Q 18 Q 18 10.623 0 0.082 0.174 15.971 0.000 0.000 12.269 LGA N 19 N 19 5.507 0 0.060 0.997 8.299 5.909 3.864 4.471 LGA W 20 W 20 1.213 0 0.615 1.008 9.002 65.909 19.610 9.002 LGA A 21 A 21 2.410 0 0.060 0.067 3.429 45.000 39.636 - LGA S 22 S 22 2.821 0 0.034 0.627 3.694 35.455 31.818 2.304 LGA L 23 L 23 1.666 0 0.074 0.210 5.260 70.000 40.000 4.680 LGA A 24 A 24 2.145 0 0.019 0.032 2.987 42.273 39.273 - LGA A 25 A 25 2.891 0 0.053 0.053 3.515 30.455 26.545 - LGA N 26 N 26 1.357 0 0.030 0.597 4.419 73.636 53.636 4.419 LGA E 27 E 27 0.991 0 0.078 0.439 3.116 74.545 55.960 3.116 LGA L 28 L 28 1.825 0 0.122 0.161 2.241 48.182 47.955 1.676 LGA R 29 R 29 2.492 0 0.013 1.777 8.315 32.727 18.017 8.315 LGA V 30 V 30 2.471 0 0.642 1.354 4.604 28.636 23.117 3.046 LGA T 31 T 31 2.056 0 0.024 0.118 5.955 55.909 33.766 4.525 LGA E 32 E 32 4.370 0 0.672 1.470 8.550 10.909 4.848 8.147 LGA R 33 R 33 9.798 0 0.076 1.063 12.654 0.000 0.000 12.654 LGA P 34 P 34 11.355 0 0.036 0.371 15.347 0.000 0.000 15.347 LGA F 35 F 35 7.715 0 0.698 1.358 9.814 0.000 0.000 9.030 LGA W 36 W 36 10.206 0 0.667 0.885 14.847 0.000 0.000 14.642 LGA I 37 I 37 10.948 0 0.036 0.382 16.277 0.000 0.000 16.277 LGA S 38 S 38 8.092 0 0.175 0.161 9.567 0.000 0.000 8.402 LGA S 39 S 39 3.126 0 0.668 0.812 5.090 15.000 11.818 5.090 LGA F 40 F 40 3.511 0 0.076 1.068 10.953 16.364 6.942 10.953 LGA I 41 I 41 2.347 0 0.640 0.566 3.755 28.636 42.273 0.915 LGA G 42 G 42 2.160 0 0.227 0.227 2.281 44.545 44.545 - LGA R 43 R 43 1.984 0 0.613 0.843 4.404 31.364 23.471 3.466 LGA S 44 S 44 5.828 0 0.697 0.799 9.950 1.364 0.909 6.038 LGA K 45 K 45 12.941 0 0.563 0.732 20.952 0.000 0.000 20.952 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 7.404 7.323 8.671 17.200 12.909 6.857 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 18 2.46 40.341 35.480 0.703 LGA_LOCAL RMSD: 2.461 Number of atoms: 18 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 11.796 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 7.404 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.183875 * X + -0.975045 * Y + -0.124408 * Z + 1.127332 Y_new = 0.450304 * X + -0.028946 * Y + 0.892406 * Z + 47.413769 Z_new = -0.873737 * X + -0.220112 * Y + 0.433744 * Z + 5.310095 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.183126 1.062833 -0.469606 [DEG: 67.7881 60.8959 -26.9064 ] ZXZ: -3.003078 1.122152 -1.817582 [DEG: -172.0637 64.2946 -104.1398 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS097_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 18 2.46 35.480 7.40 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS097_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 20 N ALA 2 -2.324 35.007 -7.855 1.00 1.14 ATOM 22 CA ALA 2 -2.285 36.165 -6.952 1.00 1.14 ATOM 24 CB ALA 2 -1.500 35.752 -5.695 1.00 1.14 ATOM 28 C ALA 2 -1.745 37.431 -7.651 1.00 1.14 ATOM 29 O ALA 2 -1.097 37.366 -8.692 1.00 1.14 ATOM 30 N VAL 3 -2.047 38.578 -7.054 1.00 0.78 ATOM 32 CA VAL 3 -1.838 39.943 -7.566 1.00 0.78 ATOM 34 CB VAL 3 -3.114 40.788 -7.342 1.00 0.78 ATOM 36 CG1 VAL 3 -2.982 42.227 -7.843 1.00 0.78 ATOM 40 CG2 VAL 3 -4.317 40.165 -8.065 1.00 0.78 ATOM 44 C VAL 3 -0.641 40.575 -6.863 1.00 0.78 ATOM 45 O VAL 3 -0.482 40.453 -5.644 1.00 0.78 ATOM 46 N GLN 4 0.171 41.330 -7.607 1.00 0.72 ATOM 48 CA GLN 4 1.327 42.063 -7.055 1.00 0.72 ATOM 50 CB GLN 4 2.444 42.160 -8.109 1.00 0.72 ATOM 53 CG GLN 4 2.956 40.747 -8.421 1.00 0.72 ATOM 56 CD GLN 4 4.187 40.731 -9.326 1.00 0.72 ATOM 57 OE1 GLN 4 4.479 41.668 -10.063 1.00 0.72 ATOM 58 NE2 GLN 4 4.955 39.670 -9.276 1.00 0.72 ATOM 61 C GLN 4 0.887 43.408 -6.466 1.00 0.72 ATOM 62 O GLN 4 1.269 44.473 -6.935 1.00 0.72 ATOM 63 N GLY 5 0.052 43.328 -5.435 1.00 0.73 ATOM 65 CA GLY 5 -0.474 44.460 -4.665 1.00 0.73 ATOM 68 C GLY 5 -1.701 44.029 -3.852 1.00 0.73 ATOM 69 O GLY 5 -2.019 42.843 -3.832 1.00 0.73 ATOM 70 N PRO 6 -2.378 44.951 -3.153 1.00 0.68 ATOM 71 CD PRO 6 -2.015 46.357 -3.039 1.00 0.68 ATOM 74 CG PRO 6 -2.649 46.839 -1.745 1.00 0.68 ATOM 77 CB PRO 6 -3.917 45.988 -1.649 1.00 0.68 ATOM 80 CA PRO 6 -3.526 44.656 -2.299 1.00 0.68 ATOM 82 C PRO 6 -4.718 44.060 -3.075 1.00 0.68 ATOM 83 O PRO 6 -5.011 44.495 -4.194 1.00 0.68 ATOM 84 N TRP 7 -5.417 43.092 -2.484 1.00 0.63 ATOM 86 CA TRP 7 -6.678 42.567 -3.009 1.00 0.63 ATOM 88 CB TRP 7 -6.421 41.506 -4.097 1.00 0.63 ATOM 91 CG TRP 7 -7.647 40.994 -4.779 1.00 0.63 ATOM 92 CD1 TRP 7 -8.115 39.724 -4.720 1.00 0.63 ATOM 94 NE1 TRP 7 -9.276 39.612 -5.468 1.00 0.63 ATOM 96 CE2 TRP 7 -9.611 40.813 -6.052 1.00 0.63 ATOM 97 CZ2 TRP 7 -10.662 41.201 -6.898 1.00 0.63 ATOM 99 CH2 TRP 7 -10.723 42.531 -7.347 1.00 0.63 ATOM 101 CZ3 TRP 7 -9.732 43.451 -6.950 1.00 0.63 ATOM 103 CE3 TRP 7 -8.680 43.041 -6.105 1.00 0.63 ATOM 105 CD2 TRP 7 -8.583 41.717 -5.634 1.00 0.63 ATOM 106 C TRP 7 -7.527 41.963 -1.896 1.00 0.63 ATOM 107 O TRP 7 -7.006 41.323 -0.984 1.00 0.63 ATOM 108 N VAL 8 -8.850 42.113 -2.006 1.00 0.65 ATOM 110 CA VAL 8 -9.818 41.774 -0.942 1.00 0.65 ATOM 112 CB VAL 8 -11.234 42.157 -1.398 1.00 0.65 ATOM 114 CG1 VAL 8 -11.751 41.342 -2.591 1.00 0.65 ATOM 118 CG2 VAL 8 -12.260 42.050 -0.250 1.00 0.65 ATOM 122 C VAL 8 -9.727 40.329 -0.432 1.00 0.65 ATOM 123 O VAL 8 -9.929 40.112 0.764 1.00 0.65 ATOM 124 N GLY 9 -9.327 39.349 -1.253 1.00 0.72 ATOM 126 CA GLY 9 -9.150 37.960 -0.811 1.00 0.72 ATOM 129 C GLY 9 -8.121 37.796 0.329 1.00 0.72 ATOM 130 O GLY 9 -8.358 37.022 1.253 1.00 0.72 ATOM 131 N SER 10 -7.061 38.610 0.342 1.00 0.68 ATOM 133 CA SER 10 -6.073 38.677 1.454 1.00 0.68 ATOM 135 CB SER 10 -4.786 39.344 0.982 1.00 0.68 ATOM 138 OG SER 10 -4.223 38.566 -0.045 1.00 0.68 ATOM 140 C SER 10 -6.594 39.368 2.719 1.00 0.68 ATOM 141 O SER 10 -5.840 39.572 3.669 1.00 0.68 ATOM 142 N SER 11 -7.867 39.739 2.768 1.00 0.65 ATOM 144 CA SER 11 -8.549 40.330 3.937 1.00 0.65 ATOM 146 CB SER 11 -8.890 41.769 3.577 1.00 0.65 ATOM 149 OG SER 11 -9.093 42.532 4.739 1.00 0.65 ATOM 151 C SER 11 -9.802 39.530 4.325 1.00 0.65 ATOM 152 O SER 11 -10.049 39.262 5.497 1.00 0.65 ATOM 153 N TYR 12 -10.516 39.005 3.332 1.00 0.72 ATOM 155 CA TYR 12 -11.647 38.078 3.463 1.00 0.72 ATOM 157 CB TYR 12 -12.061 37.695 2.034 1.00 0.72 ATOM 160 CG TYR 12 -13.428 37.065 1.948 1.00 0.72 ATOM 161 CD1 TYR 12 -14.558 37.887 1.985 1.00 0.72 ATOM 163 CE1 TYR 12 -15.841 37.321 1.881 1.00 0.72 ATOM 165 CZ TYR 12 -15.992 35.938 1.732 1.00 0.72 ATOM 166 OH TYR 12 -17.246 35.409 1.631 1.00 0.72 ATOM 168 CE2 TYR 12 -14.851 35.108 1.693 1.00 0.72 ATOM 170 CD2 TYR 12 -13.572 35.664 1.814 1.00 0.72 ATOM 172 C TYR 12 -11.300 36.824 4.275 1.00 0.72 ATOM 173 O TYR 12 -12.083 36.383 5.119 1.00 0.72 ATOM 174 N VAL 13 -10.088 36.291 4.106 1.00 0.82 ATOM 176 CA VAL 13 -9.501 35.214 4.922 1.00 0.82 ATOM 178 CB VAL 13 -8.049 34.973 4.428 1.00 0.82 ATOM 180 CG1 VAL 13 -7.168 36.229 4.448 1.00 0.82 ATOM 184 CG2 VAL 13 -7.294 33.910 5.218 1.00 0.82 ATOM 188 C VAL 13 -9.544 35.503 6.436 1.00 0.82 ATOM 189 O VAL 13 -9.737 34.587 7.228 1.00 0.82 ATOM 190 N ALA 14 -9.397 36.771 6.845 1.00 0.91 ATOM 192 CA ALA 14 -9.448 37.171 8.243 1.00 0.91 ATOM 194 CB ALA 14 -8.412 38.285 8.462 1.00 0.91 ATOM 198 C ALA 14 -10.864 37.583 8.695 1.00 0.91 ATOM 199 O ALA 14 -11.262 37.262 9.819 1.00 0.91 ATOM 200 N GLU 15 -11.649 38.202 7.819 1.00 1.05 ATOM 202 CA GLU 15 -13.048 38.538 8.109 1.00 1.05 ATOM 204 CB GLU 15 -13.551 39.496 7.032 1.00 1.05 ATOM 207 CG GLU 15 -14.941 40.034 7.394 1.00 1.05 ATOM 210 CD GLU 15 -15.273 41.310 6.609 1.00 1.05 ATOM 211 OE1 GLU 15 -15.876 41.218 5.519 1.00 1.05 ATOM 212 OE2 GLU 15 -14.933 42.422 7.093 1.00 1.05 ATOM 213 C GLU 15 -13.945 37.291 8.251 1.00 1.05 ATOM 214 O GLU 15 -14.860 37.276 9.080 1.00 1.05 ATOM 215 N THR 16 -13.661 36.219 7.495 1.00 1.14 ATOM 217 CA THR 16 -14.338 34.907 7.626 1.00 1.14 ATOM 219 CB THR 16 -14.384 34.172 6.288 1.00 1.14 ATOM 221 CG2 THR 16 -15.190 34.915 5.219 1.00 1.14 ATOM 225 OG1 THR 16 -13.085 33.994 5.782 1.00 1.14 ATOM 227 C THR 16 -13.722 34.001 8.697 1.00 1.14 ATOM 228 O THR 16 -14.294 32.943 9.004 1.00 1.14 ATOM 229 N GLY 17 -12.602 34.407 9.313 1.00 1.16 ATOM 231 CA GLY 17 -11.957 33.682 10.414 1.00 1.16 ATOM 234 C GLY 17 -11.361 32.333 9.993 1.00 1.16 ATOM 235 O GLY 17 -11.583 31.317 10.659 1.00 1.16 ATOM 236 N GLN 18 -10.625 32.307 8.875 1.00 1.13 ATOM 238 CA GLN 18 -9.928 31.100 8.400 1.00 1.13 ATOM 240 CB GLN 18 -9.480 31.256 6.939 1.00 1.13 ATOM 243 CG GLN 18 -10.615 31.614 5.969 1.00 1.13 ATOM 246 CD GLN 18 -11.755 30.601 5.928 1.00 1.13 ATOM 247 OE1 GLN 18 -11.586 29.394 6.062 1.00 1.13 ATOM 248 NE2 GLN 18 -12.973 31.071 5.719 1.00 1.13 ATOM 251 C GLN 18 -8.735 30.743 9.292 1.00 1.13 ATOM 252 O GLN 18 -8.208 31.579 10.028 1.00 1.13 ATOM 253 N ASN 19 -8.254 29.504 9.189 1.00 1.60 ATOM 255 CA ASN 19 -7.328 28.903 10.161 1.00 1.60 ATOM 257 CB ASN 19 -7.107 27.436 9.738 1.00 1.60 ATOM 260 CG ASN 19 -6.890 26.533 10.944 1.00 1.60 ATOM 261 OD1 ASN 19 -5.810 26.033 11.176 1.00 1.60 ATOM 262 ND2 ASN 19 -7.913 26.309 11.734 1.00 1.60 ATOM 265 C ASN 19 -6.014 29.689 10.328 1.00 1.60 ATOM 266 O ASN 19 -5.567 29.911 11.452 1.00 1.60 ATOM 267 N TRP 20 -5.424 30.213 9.234 1.00 1.58 ATOM 269 CA TRP 20 -4.258 31.110 9.313 1.00 1.58 ATOM 271 CB TRP 20 -3.870 31.632 7.935 1.00 1.58 ATOM 274 CG TRP 20 -3.264 30.712 6.959 1.00 1.58 ATOM 275 CD1 TRP 20 -2.962 29.402 7.114 1.00 1.58 ATOM 277 NE1 TRP 20 -2.395 28.945 5.934 1.00 1.58 ATOM 279 CE2 TRP 20 -2.369 29.914 4.962 1.00 1.58 ATOM 280 CZ2 TRP 20 -1.974 29.926 3.621 1.00 1.58 ATOM 282 CH2 TRP 20 -1.957 31.151 2.928 1.00 1.58 ATOM 284 CZ3 TRP 20 -2.365 32.322 3.583 1.00 1.58 ATOM 286 CE3 TRP 20 -2.827 32.285 4.909 1.00 1.58 ATOM 288 CD2 TRP 20 -2.839 31.074 5.621 1.00 1.58 ATOM 289 C TRP 20 -4.538 32.375 10.112 1.00 1.58 ATOM 290 O TRP 20 -3.708 32.791 10.924 1.00 1.58 ATOM 291 N ALA 21 -5.683 33.012 9.879 1.00 1.14 ATOM 293 CA ALA 21 -6.016 34.289 10.501 1.00 1.14 ATOM 295 CB ALA 21 -7.215 34.896 9.783 1.00 1.14 ATOM 299 C ALA 21 -6.257 34.107 12.004 1.00 1.14 ATOM 300 O ALA 21 -5.763 34.897 12.802 1.00 1.14 ATOM 301 N SER 22 -6.890 32.993 12.408 1.00 1.22 ATOM 303 CA SER 22 -7.011 32.596 13.814 1.00 1.22 ATOM 305 CB SER 22 -7.840 31.315 13.929 1.00 1.22 ATOM 308 OG SER 22 -9.122 31.526 13.356 1.00 1.22 ATOM 310 C SER 22 -5.657 32.382 14.480 1.00 1.22 ATOM 311 O SER 22 -5.429 32.875 15.584 1.00 1.22 ATOM 312 N LEU 23 -4.705 31.736 13.799 1.00 1.35 ATOM 314 CA LEU 23 -3.344 31.554 14.335 1.00 1.35 ATOM 316 CB LEU 23 -2.590 30.508 13.497 1.00 1.35 ATOM 319 CG LEU 23 -3.100 29.076 13.716 1.00 1.35 ATOM 321 CD1 LEU 23 -2.496 28.160 12.661 1.00 1.35 ATOM 325 CD2 LEU 23 -2.706 28.532 15.086 1.00 1.35 ATOM 329 C LEU 23 -2.589 32.878 14.409 1.00 1.35 ATOM 330 O LEU 23 -2.012 33.184 15.444 1.00 1.35 ATOM 331 N ALA 24 -2.648 33.719 13.377 1.00 1.28 ATOM 333 CA ALA 24 -2.024 35.043 13.389 1.00 1.28 ATOM 335 CB ALA 24 -2.176 35.648 11.986 1.00 1.28 ATOM 339 C ALA 24 -2.613 35.960 14.470 1.00 1.28 ATOM 340 O ALA 24 -1.862 36.668 15.142 1.00 1.28 ATOM 341 N ALA 25 -3.918 35.905 14.717 1.00 1.37 ATOM 343 CA ALA 25 -4.567 36.650 15.811 1.00 1.37 ATOM 345 CB ALA 25 -6.077 36.453 15.712 1.00 1.37 ATOM 349 C ALA 25 -4.027 36.253 17.197 1.00 1.37 ATOM 350 O ALA 25 -3.888 37.119 18.061 1.00 1.37 ATOM 351 N ASN 26 -3.645 34.985 17.402 1.00 1.25 ATOM 353 CA ASN 26 -3.053 34.514 18.657 1.00 1.25 ATOM 355 CB ASN 26 -3.432 33.036 18.845 1.00 1.25 ATOM 358 CG ASN 26 -4.889 32.878 19.281 1.00 1.25 ATOM 359 OD1 ASN 26 -5.210 32.966 20.461 1.00 1.25 ATOM 360 ND2 ASN 26 -5.806 32.666 18.372 1.00 1.25 ATOM 363 C ASN 26 -1.525 34.719 18.718 1.00 1.25 ATOM 364 O ASN 26 -1.009 35.171 19.735 1.00 1.25 ATOM 365 N GLU 27 -0.801 34.388 17.647 1.00 1.05 ATOM 367 CA GLU 27 0.663 34.386 17.610 1.00 1.05 ATOM 369 CB GLU 27 1.139 33.439 16.490 1.00 1.05 ATOM 372 CG GLU 27 0.946 31.954 16.817 1.00 1.05 ATOM 375 CD GLU 27 1.989 31.463 17.848 1.00 1.05 ATOM 376 OE1 GLU 27 3.101 31.061 17.428 1.00 1.05 ATOM 377 OE2 GLU 27 1.703 31.481 19.067 1.00 1.05 ATOM 378 C GLU 27 1.273 35.768 17.364 1.00 1.05 ATOM 379 O GLU 27 2.258 36.125 17.995 1.00 1.05 ATOM 380 N LEU 28 0.689 36.549 16.441 1.00 0.80 ATOM 382 CA LEU 28 1.162 37.891 16.077 1.00 0.80 ATOM 384 CB LEU 28 1.084 38.067 14.537 1.00 0.80 ATOM 387 CG LEU 28 2.062 37.199 13.723 1.00 0.80 ATOM 389 CD1 LEU 28 1.768 37.365 12.236 1.00 0.80 ATOM 393 CD2 LEU 28 3.510 37.613 13.978 1.00 0.80 ATOM 397 C LEU 28 0.404 39.007 16.790 1.00 0.80 ATOM 398 O LEU 28 0.894 40.131 16.831 1.00 0.80 ATOM 399 N ARG 29 -0.771 38.728 17.395 1.00 0.72 ATOM 401 CA ARG 29 -1.646 39.720 18.054 1.00 0.72 ATOM 403 CB ARG 29 -1.037 40.203 19.381 1.00 0.72 ATOM 406 CG ARG 29 -0.999 39.070 20.407 1.00 0.72 ATOM 409 CD ARG 29 -0.521 39.611 21.760 1.00 0.72 ATOM 412 NE ARG 29 -0.566 38.548 22.781 1.00 0.72 ATOM 414 CZ ARG 29 -1.400 38.460 23.808 1.00 0.72 ATOM 415 NH1 ARG 29 -2.292 39.361 24.096 1.00 0.72 ATOM 418 NH2 ARG 29 -1.360 37.416 24.583 1.00 0.72 ATOM 421 C ARG 29 -2.090 40.864 17.142 1.00 0.72 ATOM 422 O ARG 29 -2.296 41.995 17.590 1.00 0.72 ATOM 423 N VAL 30 -2.315 40.581 15.861 1.00 0.75 ATOM 425 CA VAL 30 -2.811 41.534 14.841 1.00 0.75 ATOM 427 CB VAL 30 -2.846 40.836 13.455 1.00 0.75 ATOM 429 CG1 VAL 30 -3.707 39.572 13.435 1.00 0.75 ATOM 433 CG2 VAL 30 -3.323 41.727 12.315 1.00 0.75 ATOM 437 C VAL 30 -4.132 42.231 15.196 1.00 0.75 ATOM 438 O VAL 30 -4.433 43.263 14.623 1.00 0.75 ATOM 439 N THR 31 -4.891 41.742 16.169 1.00 0.88 ATOM 441 CA THR 31 -6.116 42.392 16.693 1.00 0.88 ATOM 443 CB THR 31 -7.037 41.329 17.325 1.00 0.88 ATOM 445 CG2 THR 31 -7.641 40.418 16.259 1.00 0.88 ATOM 449 OG1 THR 31 -6.262 40.517 18.180 1.00 0.88 ATOM 451 C THR 31 -5.851 43.476 17.743 1.00 0.88 ATOM 452 O THR 31 -6.733 44.306 17.996 1.00 0.88 ATOM 453 N GLU 32 -4.658 43.513 18.356 1.00 0.80 ATOM 455 CA GLU 32 -4.354 44.433 19.478 1.00 0.80 ATOM 457 CB GLU 32 -4.674 43.743 20.806 1.00 0.80 ATOM 460 CG GLU 32 -3.923 42.423 21.016 1.00 0.80 ATOM 463 CD GLU 32 -4.097 41.894 22.447 1.00 0.80 ATOM 464 OE1 GLU 32 -5.221 41.500 22.843 1.00 0.80 ATOM 465 OE2 GLU 32 -3.083 41.832 23.189 1.00 0.80 ATOM 466 C GLU 32 -2.923 45.029 19.468 1.00 0.80 ATOM 467 O GLU 32 -2.620 45.850 20.333 1.00 0.80 ATOM 468 N ARG 33 -2.068 44.667 18.500 1.00 0.63 ATOM 470 CA ARG 33 -0.707 45.234 18.346 1.00 0.63 ATOM 472 CB ARG 33 0.341 44.151 18.707 1.00 0.63 ATOM 475 CG ARG 33 0.245 43.647 20.155 1.00 0.63 ATOM 478 CD ARG 33 0.502 44.762 21.185 1.00 0.63 ATOM 481 NE ARG 33 0.025 44.390 22.529 1.00 0.63 ATOM 483 CZ ARG 33 0.758 44.231 23.620 1.00 0.63 ATOM 484 NH1 ARG 33 2.052 44.080 23.586 1.00 0.63 ATOM 487 NH2 ARG 33 0.208 44.213 24.788 1.00 0.63 ATOM 490 C ARG 33 -0.490 45.809 16.948 1.00 0.63 ATOM 491 O ARG 33 -1.039 45.253 15.997 1.00 0.63 ATOM 492 N PRO 34 0.285 46.896 16.779 1.00 0.58 ATOM 493 CD PRO 34 0.981 47.653 17.819 1.00 0.58 ATOM 496 CG PRO 34 1.786 48.748 17.111 1.00 0.58 ATOM 499 CB PRO 34 0.980 48.976 15.834 1.00 0.58 ATOM 502 CA PRO 34 0.452 47.577 15.494 1.00 0.58 ATOM 504 C PRO 34 1.385 46.810 14.551 1.00 0.58 ATOM 505 O PRO 34 2.216 46.003 14.974 1.00 0.58 ATOM 506 N PHE 35 1.261 47.053 13.254 1.00 0.72 ATOM 508 CA PHE 35 1.677 46.091 12.217 1.00 0.72 ATOM 510 CB PHE 35 0.846 46.363 10.957 1.00 0.72 ATOM 513 CG PHE 35 -0.636 46.576 11.270 1.00 0.72 ATOM 514 CD1 PHE 35 -1.241 47.815 11.015 1.00 0.72 ATOM 516 CE1 PHE 35 -2.561 48.060 11.424 1.00 0.72 ATOM 518 CZ PHE 35 -3.290 47.056 12.104 1.00 0.72 ATOM 520 CE2 PHE 35 -2.675 45.817 12.361 1.00 0.72 ATOM 522 CD2 PHE 35 -1.354 45.577 11.944 1.00 0.72 ATOM 524 C PHE 35 3.190 45.991 11.980 1.00 0.72 ATOM 525 O PHE 35 3.643 45.063 11.322 1.00 0.72 ATOM 526 N TRP 36 3.997 46.853 12.606 1.00 0.81 ATOM 528 CA TRP 36 5.461 46.681 12.688 1.00 0.81 ATOM 530 CB TRP 36 6.146 48.026 12.930 1.00 0.81 ATOM 533 CG TRP 36 5.522 48.928 13.938 1.00 0.81 ATOM 534 CD1 TRP 36 5.839 49.008 15.248 1.00 0.81 ATOM 536 NE1 TRP 36 5.102 50.008 15.837 1.00 0.81 ATOM 538 CE2 TRP 36 4.262 50.621 14.935 1.00 0.81 ATOM 539 CZ2 TRP 36 3.350 51.673 15.022 1.00 0.81 ATOM 541 CH2 TRP 36 2.620 52.056 13.887 1.00 0.81 ATOM 543 CZ3 TRP 36 2.824 51.378 12.665 1.00 0.81 ATOM 545 CE3 TRP 36 3.744 50.322 12.589 1.00 0.81 ATOM 547 CD2 TRP 36 4.498 49.927 13.711 1.00 0.81 ATOM 548 C TRP 36 5.902 45.641 13.732 1.00 0.81 ATOM 549 O TRP 36 7.021 45.150 13.657 1.00 0.81 ATOM 550 N ILE 37 5.015 45.264 14.668 1.00 0.74 ATOM 552 CA ILE 37 5.271 44.183 15.629 1.00 0.74 ATOM 554 CB ILE 37 5.343 44.779 17.050 1.00 0.74 ATOM 556 CG2 ILE 37 4.008 45.409 17.471 1.00 0.74 ATOM 560 CG1 ILE 37 5.848 43.755 18.082 1.00 0.74 ATOM 563 CD1 ILE 37 6.302 44.402 19.393 1.00 0.74 ATOM 567 C ILE 37 4.309 43.000 15.458 1.00 0.74 ATOM 568 O ILE 37 4.681 41.866 15.730 1.00 0.74 ATOM 569 N SER 38 3.100 43.214 14.925 1.00 0.75 ATOM 571 CA SER 38 2.139 42.152 14.552 1.00 0.75 ATOM 573 CB SER 38 0.723 42.577 14.908 1.00 0.75 ATOM 576 OG SER 38 0.411 43.787 14.265 1.00 0.75 ATOM 578 C SER 38 2.266 41.655 13.099 1.00 0.75 ATOM 579 O SER 38 1.384 40.956 12.599 1.00 0.75 ATOM 580 N SER 39 3.394 41.936 12.428 1.00 0.63 ATOM 582 CA SER 39 3.807 41.287 11.184 1.00 0.63 ATOM 584 CB SER 39 3.911 42.293 10.043 1.00 0.63 ATOM 587 OG SER 39 4.187 41.627 8.819 1.00 0.63 ATOM 589 C SER 39 5.155 40.602 11.390 1.00 0.63 ATOM 590 O SER 39 6.059 41.189 11.986 1.00 0.63 ATOM 591 N PHE 40 5.324 39.366 10.892 1.00 0.76 ATOM 593 CA PHE 40 6.513 38.560 11.184 1.00 0.76 ATOM 595 CB PHE 40 6.352 37.171 10.538 1.00 0.76 ATOM 598 CG PHE 40 7.524 36.253 10.826 1.00 0.76 ATOM 599 CD1 PHE 40 7.665 35.679 12.094 1.00 0.76 ATOM 601 CE1 PHE 40 8.801 34.899 12.388 1.00 0.76 ATOM 603 CZ PHE 40 9.788 34.697 11.404 1.00 0.76 ATOM 605 CE2 PHE 40 9.630 35.252 10.124 1.00 0.76 ATOM 607 CD2 PHE 40 8.504 36.033 9.831 1.00 0.76 ATOM 609 C PHE 40 7.820 39.241 10.757 1.00 0.76 ATOM 610 O PHE 40 8.777 39.231 11.514 1.00 0.76 ATOM 611 N ILE 41 7.852 39.924 9.616 1.00 0.83 ATOM 613 CA ILE 41 9.054 40.583 9.065 1.00 0.83 ATOM 615 CB ILE 41 8.848 41.065 7.599 1.00 0.83 ATOM 617 CG2 ILE 41 9.948 40.473 6.713 1.00 0.83 ATOM 621 CG1 ILE 41 7.449 40.759 7.021 1.00 0.83 ATOM 624 CD1 ILE 41 7.191 41.352 5.635 1.00 0.83 ATOM 628 C ILE 41 9.544 41.772 9.918 1.00 0.83 ATOM 629 O ILE 41 10.732 42.124 9.880 1.00 0.83 ATOM 630 N GLY 42 8.652 42.388 10.700 1.00 0.75 ATOM 632 CA GLY 42 9.020 43.382 11.713 1.00 0.75 ATOM 635 C GLY 42 9.396 42.734 13.038 1.00 0.75 ATOM 636 O GLY 42 10.424 43.065 13.620 1.00 0.75 ATOM 637 N ARG 43 8.619 41.728 13.478 1.00 0.88 ATOM 639 CA ARG 43 8.828 40.986 14.742 1.00 0.88 ATOM 641 CB ARG 43 7.650 40.026 14.903 1.00 0.88 ATOM 644 CG ARG 43 7.375 39.629 16.357 1.00 0.88 ATOM 647 CD ARG 43 6.210 38.638 16.379 1.00 0.88 ATOM 650 NE ARG 43 5.643 38.473 17.732 1.00 0.88 ATOM 652 CZ ARG 43 4.491 38.969 18.180 1.00 0.88 ATOM 653 NH1 ARG 43 3.826 39.873 17.510 1.00 0.88 ATOM 656 NH2 ARG 43 3.992 38.563 19.308 1.00 0.88 ATOM 659 C ARG 43 10.173 40.234 14.786 1.00 0.88 ATOM 660 O ARG 43 10.835 40.184 15.815 1.00 0.88 ATOM 661 N SER 44 10.583 39.697 13.634 1.00 0.91 ATOM 663 CA SER 44 11.891 39.054 13.372 1.00 0.91 ATOM 665 CB SER 44 11.765 38.214 12.088 1.00 0.91 ATOM 668 OG SER 44 11.322 39.093 11.075 1.00 0.91 ATOM 670 C SER 44 13.055 40.040 13.175 1.00 0.91 ATOM 671 O SER 44 14.218 39.622 13.124 1.00 0.91 ATOM 672 N LYS 45 12.755 41.342 13.062 1.00 0.98 ATOM 674 CA LYS 45 13.673 42.446 12.714 1.00 0.98 ATOM 676 CB LYS 45 14.582 42.798 13.910 1.00 0.98 ATOM 679 CG LYS 45 13.738 43.166 15.147 1.00 0.98 ATOM 682 CD LYS 45 14.564 43.444 16.403 1.00 0.98 ATOM 685 CE LYS 45 15.370 44.751 16.296 1.00 0.98 ATOM 688 NZ LYS 45 16.042 45.078 17.590 1.00 0.98 ATOM 692 C LYS 45 14.401 42.222 11.378 1.00 0.98 ATOM 693 O LYS 45 15.534 42.674 11.163 1.00 0.98 TER END