####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS097_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 7 - 37 4.96 9.68 LCS_AVERAGE: 62.81 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 10 - 22 1.92 12.07 LCS_AVERAGE: 20.04 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 11 - 19 0.56 13.32 LCS_AVERAGE: 13.69 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 7 11 4 4 5 6 6 7 8 8 9 9 9 9 11 14 15 17 18 19 20 20 LCS_GDT V 3 V 3 4 7 11 4 4 5 6 6 7 8 8 9 9 9 9 9 14 15 15 18 19 20 25 LCS_GDT Q 4 Q 4 5 7 28 4 4 5 6 6 7 8 8 11 15 19 21 23 26 29 32 34 36 36 36 LCS_GDT G 5 G 5 5 7 28 4 4 5 6 6 7 10 11 14 18 21 24 26 28 31 34 35 36 36 36 LCS_GDT P 6 P 6 5 7 28 3 4 5 6 6 7 8 8 9 9 11 13 19 27 31 34 35 36 36 36 LCS_GDT W 7 W 7 5 7 31 4 4 5 6 6 7 8 8 15 18 21 24 27 29 31 34 35 36 36 36 LCS_GDT V 8 V 8 5 7 31 4 4 5 6 8 8 9 11 12 16 20 24 25 28 31 34 35 36 36 36 LCS_GDT G 9 G 9 4 4 31 4 4 4 4 6 9 11 13 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT S 10 S 10 4 13 31 4 4 4 4 7 11 12 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT S 11 S 11 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT Y 12 Y 12 9 13 31 5 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT V 13 V 13 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT A 14 A 14 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT E 15 E 15 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT T 16 T 16 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT G 17 G 17 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT Q 18 Q 18 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT N 19 N 19 9 13 31 6 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT W 20 W 20 8 13 31 7 8 8 9 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT A 21 A 21 8 13 31 7 8 8 9 11 12 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT S 22 S 22 8 13 31 7 8 8 10 11 12 14 16 17 20 23 25 27 29 31 34 35 36 36 36 LCS_GDT L 23 L 23 8 11 31 7 8 8 9 10 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT A 24 A 24 8 11 31 7 8 8 9 10 11 13 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT A 25 A 25 8 11 31 7 8 8 9 10 11 13 15 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT N 26 N 26 8 11 31 7 8 8 9 10 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT E 27 E 27 8 11 31 4 8 8 9 10 11 13 15 17 20 23 25 27 29 31 34 35 36 36 36 LCS_GDT L 28 L 28 8 11 31 3 5 8 9 10 11 13 15 17 20 21 24 27 29 31 34 35 36 36 36 LCS_GDT R 29 R 29 5 11 31 3 5 5 9 10 11 13 15 17 20 21 25 27 29 31 34 35 36 36 36 LCS_GDT V 30 V 30 4 7 31 3 4 4 4 6 9 13 15 17 20 21 25 27 29 31 34 35 36 36 36 LCS_GDT T 31 T 31 4 6 31 3 4 4 5 8 9 11 14 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT E 32 E 32 3 5 31 3 3 3 4 8 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT R 33 R 33 5 5 31 3 3 5 5 8 9 11 12 14 20 23 23 25 28 30 34 35 36 36 36 LCS_GDT P 34 P 34 5 5 31 3 4 5 5 8 9 11 11 12 20 23 24 26 28 30 34 35 36 36 36 LCS_GDT F 35 F 35 5 5 31 3 4 5 5 8 9 13 16 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT W 36 W 36 5 5 31 3 4 5 5 7 9 11 14 18 21 23 25 27 29 31 34 35 36 36 36 LCS_GDT I 37 I 37 5 5 31 3 4 5 5 6 8 11 14 18 20 23 25 27 29 31 34 35 36 36 36 LCS_GDT S 38 S 38 3 5 30 1 4 4 5 8 9 12 15 17 20 21 24 27 29 31 34 35 36 36 36 LCS_GDT S 39 S 39 4 5 17 3 4 4 5 8 11 13 15 17 20 21 24 26 29 31 33 35 36 36 36 LCS_GDT F 40 F 40 4 6 17 3 4 4 9 10 11 12 13 15 15 17 18 19 19 23 24 27 29 30 33 LCS_GDT I 41 I 41 4 6 17 3 4 5 5 6 6 8 10 12 13 14 15 16 18 21 22 27 28 29 30 LCS_GDT G 42 G 42 4 6 17 3 4 5 5 6 6 8 10 11 13 13 14 14 15 17 18 18 19 20 30 LCS_GDT R 43 R 43 4 6 17 3 4 5 5 6 6 8 10 12 13 14 15 16 16 17 18 21 28 29 30 LCS_GDT S 44 S 44 4 6 17 3 4 5 5 6 6 8 10 11 13 14 15 16 16 22 23 27 28 34 34 LCS_GDT K 45 K 45 3 6 17 0 3 4 5 6 6 8 10 11 13 13 14 16 19 22 24 27 31 34 35 LCS_AVERAGE LCS_A: 32.18 ( 13.69 20.04 62.81 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 9 10 11 13 14 16 18 21 23 25 27 29 31 34 35 36 36 36 GDT PERCENT_AT 15.91 20.45 20.45 22.73 25.00 29.55 31.82 36.36 40.91 47.73 52.27 56.82 61.36 65.91 70.45 77.27 79.55 81.82 81.82 81.82 GDT RMS_LOCAL 0.25 0.56 0.56 1.05 1.41 2.25 2.29 2.67 3.00 3.50 3.64 4.14 4.34 4.70 5.09 5.45 5.59 5.78 5.78 5.78 GDT RMS_ALL_AT 15.25 13.32 13.32 12.23 12.23 10.51 10.48 10.52 10.39 10.00 10.40 9.61 9.60 9.33 9.27 9.32 9.23 9.19 9.19 9.19 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 32 E 32 # possible swapping detected: F 35 F 35 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 23.347 0 0.364 0.407 24.863 0.000 0.000 - LGA V 3 V 3 19.789 0 0.023 0.998 21.589 0.000 0.000 20.602 LGA Q 4 Q 4 15.055 0 0.126 1.342 17.349 0.000 0.000 13.583 LGA G 5 G 5 12.320 0 0.048 0.048 13.004 0.000 0.000 - LGA P 6 P 6 10.714 0 0.062 0.378 13.526 0.000 0.000 13.336 LGA W 7 W 7 8.414 0 0.341 0.946 13.210 0.000 0.000 12.752 LGA V 8 V 8 8.735 0 0.023 1.131 13.444 0.000 0.000 13.444 LGA G 9 G 9 4.913 0 0.563 0.563 5.400 5.909 5.909 - LGA S 10 S 10 4.183 0 0.497 0.845 5.502 8.636 5.758 5.443 LGA S 11 S 11 2.006 0 0.583 0.570 5.559 66.818 46.364 5.559 LGA Y 12 Y 12 1.514 0 0.035 1.157 12.282 61.818 23.030 12.282 LGA V 13 V 13 0.852 0 0.036 0.046 2.238 73.636 60.260 2.027 LGA A 14 A 14 1.698 0 0.090 0.087 2.820 49.545 49.818 - LGA E 15 E 15 2.573 0 0.046 1.103 5.527 30.909 20.606 5.527 LGA T 16 T 16 2.231 0 0.059 0.115 2.620 35.455 38.442 1.745 LGA G 17 G 17 1.818 0 0.055 0.055 1.818 58.182 58.182 - LGA Q 18 Q 18 1.204 0 0.059 0.707 2.932 65.455 53.333 2.932 LGA N 19 N 19 2.016 0 0.645 1.260 5.599 37.727 21.818 5.599 LGA W 20 W 20 2.125 0 0.632 1.267 12.255 59.091 17.013 12.255 LGA A 21 A 21 3.432 0 0.036 0.042 5.560 24.545 19.636 - LGA S 22 S 22 3.584 0 0.045 0.590 5.506 32.727 22.121 4.972 LGA L 23 L 23 3.216 0 0.089 0.197 8.153 20.455 10.227 8.153 LGA A 24 A 24 5.634 0 0.027 0.031 7.411 2.727 2.182 - LGA A 25 A 25 5.252 0 0.124 0.121 6.173 0.909 0.727 - LGA N 26 N 26 4.034 0 0.016 0.484 7.198 5.909 18.864 1.962 LGA E 27 E 27 8.852 0 0.076 0.154 11.714 0.000 0.000 9.757 LGA L 28 L 28 10.865 0 0.095 0.149 12.742 0.000 0.000 9.784 LGA R 29 R 29 11.021 0 0.338 1.021 14.656 0.000 0.000 14.656 LGA V 30 V 30 10.784 0 0.652 0.977 13.313 0.000 0.000 9.873 LGA T 31 T 31 8.893 0 0.048 0.101 11.894 0.000 0.000 8.273 LGA E 32 E 32 3.170 0 0.613 1.348 6.959 5.455 10.101 4.651 LGA R 33 R 33 6.858 0 0.072 1.037 10.170 0.455 0.165 9.409 LGA P 34 P 34 6.649 0 0.076 0.382 8.836 0.000 0.000 8.836 LGA F 35 F 35 5.523 0 0.082 1.245 6.611 0.000 0.000 6.611 LGA W 36 W 36 6.788 0 0.654 0.403 10.180 0.000 0.390 6.651 LGA I 37 I 37 7.637 0 0.642 1.376 9.762 0.000 0.000 5.948 LGA S 38 S 38 11.274 0 0.571 0.805 13.136 0.000 0.000 13.136 LGA S 39 S 39 12.307 0 0.698 0.804 15.563 0.000 0.000 9.392 LGA F 40 F 40 16.373 0 0.269 1.466 19.424 0.000 0.000 13.796 LGA I 41 I 41 18.065 0 0.052 0.661 19.049 0.000 0.000 17.934 LGA G 42 G 42 22.311 0 0.031 0.031 22.499 0.000 0.000 - LGA R 43 R 43 19.778 0 0.045 1.103 22.345 0.000 0.000 22.345 LGA S 44 S 44 17.687 0 0.708 0.593 20.654 0.000 0.000 20.654 LGA K 45 K 45 16.654 0 0.051 0.591 20.893 0.000 0.000 17.572 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.858 8.796 9.544 14.690 11.021 4.883 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.67 39.205 33.699 0.579 LGA_LOCAL RMSD: 2.665 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.516 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.858 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.544917 * X + 0.837020 * Y + 0.049624 * Z + -8.590411 Y_new = -0.356805 * X + 0.285031 * Y + -0.889634 * Z + 35.237366 Z_new = -0.758786 * X + 0.467070 * Y + 0.453971 * Z + 0.791955 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.579733 0.861447 0.799619 [DEG: -33.2163 49.3573 45.8148 ] ZXZ: 0.055723 1.099579 -1.019022 [DEG: 3.1927 63.0013 -58.3856 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS097_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.67 33.699 8.86 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS097_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 7.326 26.575 -9.190 1.00 3.91 ATOM 22 CA ALA 2 7.291 27.213 -7.868 1.00 3.91 ATOM 24 CB ALA 2 7.924 28.595 -7.984 1.00 3.91 ATOM 28 C ALA 2 5.861 27.229 -7.307 1.00 3.91 ATOM 29 O ALA 2 5.188 28.268 -7.291 1.00 3.91 ATOM 30 N VAL 3 5.380 26.082 -6.837 1.00 2.76 ATOM 32 CA VAL 3 4.213 26.054 -5.949 1.00 2.76 ATOM 34 CB VAL 3 3.589 24.658 -5.819 1.00 2.76 ATOM 36 CG1 VAL 3 2.864 24.298 -7.106 1.00 2.76 ATOM 40 CG2 VAL 3 4.561 23.534 -5.462 1.00 2.76 ATOM 44 C VAL 3 4.630 26.594 -4.585 1.00 2.76 ATOM 45 O VAL 3 5.645 26.180 -4.031 1.00 2.76 ATOM 46 N GLN 4 3.863 27.545 -4.068 1.00 1.88 ATOM 48 CA GLN 4 4.189 28.146 -2.772 1.00 1.88 ATOM 50 CB GLN 4 5.300 29.208 -2.948 1.00 1.88 ATOM 53 CG GLN 4 5.048 30.392 -3.883 1.00 1.88 ATOM 56 CD GLN 4 4.581 31.573 -3.060 1.00 1.88 ATOM 57 OE1 GLN 4 5.343 32.247 -2.395 1.00 1.88 ATOM 58 NE2 GLN 4 3.284 31.786 -2.985 1.00 1.88 ATOM 61 C GLN 4 2.941 28.540 -1.995 1.00 1.88 ATOM 62 O GLN 4 1.825 28.340 -2.465 1.00 1.88 ATOM 63 N GLY 5 3.138 28.990 -0.761 1.00 1.64 ATOM 65 CA GLY 5 2.102 29.069 0.277 1.00 1.64 ATOM 68 C GLY 5 2.755 29.212 1.654 1.00 1.64 ATOM 69 O GLY 5 3.979 29.216 1.727 1.00 1.64 ATOM 70 N PRO 6 1.986 29.314 2.754 1.00 1.96 ATOM 71 CD PRO 6 0.532 29.173 2.791 1.00 1.96 ATOM 74 CG PRO 6 0.068 30.059 3.939 1.00 1.96 ATOM 77 CB PRO 6 1.233 29.974 4.921 1.00 1.96 ATOM 80 CA PRO 6 2.478 29.856 4.026 1.00 1.96 ATOM 82 C PRO 6 3.598 29.088 4.756 1.00 1.96 ATOM 83 O PRO 6 4.122 29.586 5.741 1.00 1.96 ATOM 84 N TRP 7 3.967 27.884 4.295 1.00 2.07 ATOM 86 CA TRP 7 5.066 27.090 4.865 1.00 2.07 ATOM 88 CB TRP 7 4.537 25.737 5.333 1.00 2.07 ATOM 91 CG TRP 7 3.590 25.054 4.407 1.00 2.07 ATOM 92 CD1 TRP 7 3.914 24.149 3.457 1.00 2.07 ATOM 94 NE1 TRP 7 2.766 23.725 2.819 1.00 2.07 ATOM 96 CE2 TRP 7 1.639 24.348 3.324 1.00 2.07 ATOM 97 CZ2 TRP 7 0.275 24.244 3.027 1.00 2.07 ATOM 99 CH2 TRP 7 -0.633 25.040 3.740 1.00 2.07 ATOM 101 CZ3 TRP 7 -0.169 25.927 4.723 1.00 2.07 ATOM 103 CE3 TRP 7 1.206 26.007 5.014 1.00 2.07 ATOM 105 CD2 TRP 7 2.148 25.213 4.325 1.00 2.07 ATOM 106 C TRP 7 6.322 26.990 3.982 1.00 2.07 ATOM 107 O TRP 7 7.319 26.428 4.422 1.00 2.07 ATOM 108 N VAL 8 6.301 27.579 2.781 1.00 2.21 ATOM 110 CA VAL 8 7.533 27.810 1.975 1.00 2.21 ATOM 112 CB VAL 8 7.565 26.994 0.682 1.00 2.21 ATOM 114 CG1 VAL 8 7.696 25.498 0.952 1.00 2.21 ATOM 118 CG2 VAL 8 6.329 27.202 -0.185 1.00 2.21 ATOM 122 C VAL 8 7.788 29.285 1.689 1.00 2.21 ATOM 123 O VAL 8 8.945 29.702 1.652 1.00 2.21 ATOM 124 N GLY 9 6.735 30.111 1.572 1.00 2.40 ATOM 126 CA GLY 9 6.865 31.536 1.839 1.00 2.40 ATOM 129 C GLY 9 7.095 31.723 3.326 1.00 2.40 ATOM 130 O GLY 9 6.384 31.110 4.119 1.00 2.40 ATOM 131 N SER 10 8.106 32.488 3.745 1.00 1.15 ATOM 133 CA SER 10 8.562 32.499 5.148 1.00 1.15 ATOM 135 CB SER 10 9.984 33.035 5.206 1.00 1.15 ATOM 138 OG SER 10 10.507 32.891 6.519 1.00 1.15 ATOM 140 C SER 10 7.593 33.240 6.068 1.00 1.15 ATOM 141 O SER 10 7.815 34.399 6.420 1.00 1.15 ATOM 142 N SER 11 6.477 32.605 6.422 1.00 1.12 ATOM 144 CA SER 11 5.445 33.116 7.338 1.00 1.12 ATOM 146 CB SER 11 4.063 32.918 6.703 1.00 1.12 ATOM 149 OG SER 11 3.111 33.607 7.474 1.00 1.12 ATOM 151 C SER 11 5.508 32.429 8.694 1.00 1.12 ATOM 152 O SER 11 6.077 31.348 8.847 1.00 1.12 ATOM 153 N TYR 12 4.862 33.022 9.705 1.00 1.33 ATOM 155 CA TYR 12 4.780 32.474 11.063 1.00 1.33 ATOM 157 CB TYR 12 3.999 33.438 11.960 1.00 1.33 ATOM 160 CG TYR 12 4.764 34.701 12.258 1.00 1.33 ATOM 161 CD1 TYR 12 4.384 35.917 11.664 1.00 1.33 ATOM 163 CE1 TYR 12 5.078 37.090 11.993 1.00 1.33 ATOM 165 CZ TYR 12 6.145 37.054 12.908 1.00 1.33 ATOM 166 OH TYR 12 6.803 38.193 13.240 1.00 1.33 ATOM 168 CE2 TYR 12 6.534 35.826 13.475 1.00 1.33 ATOM 170 CD2 TYR 12 5.848 34.655 13.150 1.00 1.33 ATOM 172 C TYR 12 4.108 31.110 11.130 1.00 1.33 ATOM 173 O TYR 12 4.404 30.331 12.038 1.00 1.33 ATOM 174 N VAL 13 3.282 30.755 10.150 1.00 1.40 ATOM 176 CA VAL 13 2.697 29.412 10.006 1.00 1.40 ATOM 178 CB VAL 13 1.915 29.355 8.680 1.00 1.40 ATOM 180 CG1 VAL 13 1.368 27.955 8.353 1.00 1.40 ATOM 184 CG2 VAL 13 0.734 30.326 8.706 1.00 1.40 ATOM 188 C VAL 13 3.774 28.324 10.025 1.00 1.40 ATOM 189 O VAL 13 3.599 27.277 10.656 1.00 1.40 ATOM 190 N ALA 14 4.921 28.584 9.395 1.00 1.52 ATOM 192 CA ALA 14 6.052 27.657 9.326 1.00 1.52 ATOM 194 CB ALA 14 7.038 28.190 8.281 1.00 1.52 ATOM 198 C ALA 14 6.769 27.467 10.682 1.00 1.52 ATOM 199 O ALA 14 7.385 26.413 10.907 1.00 1.52 ATOM 200 N GLU 15 6.712 28.457 11.572 1.00 1.68 ATOM 202 CA GLU 15 7.480 28.482 12.836 1.00 1.68 ATOM 204 CB GLU 15 8.225 29.820 12.953 1.00 1.68 ATOM 207 CG GLU 15 9.187 30.014 11.774 1.00 1.68 ATOM 210 CD GLU 15 10.466 30.752 12.201 1.00 1.68 ATOM 211 OE1 GLU 15 10.611 31.953 11.872 1.00 1.68 ATOM 212 OE2 GLU 15 11.356 30.123 12.832 1.00 1.68 ATOM 213 C GLU 15 6.637 28.207 14.087 1.00 1.68 ATOM 214 O GLU 15 7.134 27.659 15.071 1.00 1.68 ATOM 215 N THR 16 5.346 28.554 14.025 1.00 1.69 ATOM 217 CA THR 16 4.336 28.275 15.065 1.00 1.69 ATOM 219 CB THR 16 3.235 29.336 15.040 1.00 1.69 ATOM 221 CG2 THR 16 3.753 30.748 15.328 1.00 1.69 ATOM 225 OG1 THR 16 2.638 29.333 13.756 1.00 1.69 ATOM 227 C THR 16 3.675 26.906 14.878 1.00 1.69 ATOM 228 O THR 16 3.205 26.308 15.850 1.00 1.69 ATOM 229 N GLY 17 3.618 26.413 13.632 1.00 1.68 ATOM 231 CA GLY 17 2.847 25.232 13.252 1.00 1.68 ATOM 234 C GLY 17 1.330 25.457 13.242 1.00 1.68 ATOM 235 O GLY 17 0.581 24.470 13.195 1.00 1.68 ATOM 236 N GLN 18 0.851 26.705 13.339 1.00 1.30 ATOM 238 CA GLN 18 -0.584 27.028 13.423 1.00 1.30 ATOM 240 CB GLN 18 -0.822 28.138 14.456 1.00 1.30 ATOM 243 CG GLN 18 -0.485 27.649 15.864 1.00 1.30 ATOM 246 CD GLN 18 -1.113 28.492 16.967 1.00 1.30 ATOM 247 OE1 GLN 18 -2.046 29.256 16.781 1.00 1.30 ATOM 248 NE2 GLN 18 -0.651 28.347 18.197 1.00 1.30 ATOM 251 C GLN 18 -1.196 27.427 12.070 1.00 1.30 ATOM 252 O GLN 18 -0.523 27.948 11.189 1.00 1.30 ATOM 253 N ASN 19 -2.508 27.210 11.942 1.00 1.10 ATOM 255 CA ASN 19 -3.280 27.664 10.779 1.00 1.10 ATOM 257 CB ASN 19 -4.711 27.072 10.899 1.00 1.10 ATOM 260 CG ASN 19 -5.534 27.289 9.652 1.00 1.10 ATOM 261 OD1 ASN 19 -5.835 28.414 9.290 1.00 1.10 ATOM 262 ND2 ASN 19 -5.905 26.252 8.938 1.00 1.10 ATOM 265 C ASN 19 -3.285 29.201 10.685 1.00 1.10 ATOM 266 O ASN 19 -3.382 29.893 11.700 1.00 1.10 ATOM 267 N TRP 20 -3.205 29.748 9.458 1.00 0.82 ATOM 269 CA TRP 20 -3.118 31.191 9.236 1.00 0.82 ATOM 271 CB TRP 20 -2.942 31.481 7.737 1.00 0.82 ATOM 274 CG TRP 20 -2.855 32.950 7.412 1.00 0.82 ATOM 275 CD1 TRP 20 -3.729 33.630 6.637 1.00 0.82 ATOM 277 NE1 TRP 20 -3.379 34.970 6.626 1.00 0.82 ATOM 279 CE2 TRP 20 -2.254 35.212 7.374 1.00 0.82 ATOM 280 CZ2 TRP 20 -1.511 36.371 7.626 1.00 0.82 ATOM 282 CH2 TRP 20 -0.354 36.285 8.431 1.00 0.82 ATOM 284 CZ3 TRP 20 0.032 35.033 8.954 1.00 0.82 ATOM 286 CE3 TRP 20 -0.728 33.877 8.688 1.00 0.82 ATOM 288 CD2 TRP 20 -1.887 33.930 7.884 1.00 0.82 ATOM 289 C TRP 20 -4.306 31.972 9.796 1.00 0.82 ATOM 290 O TRP 20 -4.118 33.066 10.312 1.00 0.82 ATOM 291 N ALA 21 -5.515 31.403 9.827 1.00 0.80 ATOM 293 CA ALA 21 -6.684 32.078 10.396 1.00 0.80 ATOM 295 CB ALA 21 -7.897 31.174 10.188 1.00 0.80 ATOM 299 C ALA 21 -6.517 32.435 11.891 1.00 0.80 ATOM 300 O ALA 21 -6.956 33.507 12.323 1.00 0.80 ATOM 301 N SER 22 -5.834 31.585 12.663 1.00 0.89 ATOM 303 CA SER 22 -5.528 31.833 14.084 1.00 0.89 ATOM 305 CB SER 22 -4.949 30.569 14.738 1.00 0.89 ATOM 308 OG SER 22 -5.785 29.447 14.481 1.00 0.89 ATOM 310 C SER 22 -4.536 32.979 14.283 1.00 0.89 ATOM 311 O SER 22 -4.623 33.733 15.263 1.00 0.89 ATOM 312 N LEU 23 -3.596 33.159 13.345 1.00 0.82 ATOM 314 CA LEU 23 -2.637 34.262 13.330 1.00 0.82 ATOM 316 CB LEU 23 -1.431 33.872 12.456 1.00 0.82 ATOM 319 CG LEU 23 -0.592 32.715 13.049 1.00 0.82 ATOM 321 CD1 LEU 23 0.348 32.157 11.984 1.00 0.82 ATOM 325 CD2 LEU 23 0.253 33.174 14.231 1.00 0.82 ATOM 329 C LEU 23 -3.304 35.557 12.835 1.00 0.82 ATOM 330 O LEU 23 -3.212 36.586 13.498 1.00 0.82 ATOM 331 N ALA 24 -4.067 35.485 11.742 1.00 0.69 ATOM 333 CA ALA 24 -4.821 36.609 11.186 1.00 0.69 ATOM 335 CB ALA 24 -5.566 36.110 9.936 1.00 0.69 ATOM 339 C ALA 24 -5.804 37.240 12.199 1.00 0.69 ATOM 340 O ALA 24 -5.949 38.452 12.211 1.00 0.69 ATOM 341 N ALA 25 -6.394 36.442 13.100 1.00 0.73 ATOM 343 CA ALA 25 -7.234 36.917 14.210 1.00 0.73 ATOM 345 CB ALA 25 -7.748 35.686 14.961 1.00 0.73 ATOM 349 C ALA 25 -6.531 37.898 15.177 1.00 0.73 ATOM 350 O ALA 25 -7.196 38.695 15.840 1.00 0.73 ATOM 351 N ASN 26 -5.195 37.879 15.235 1.00 0.91 ATOM 353 CA ASN 26 -4.378 38.830 15.995 1.00 0.91 ATOM 355 CB ASN 26 -3.332 38.051 16.822 1.00 0.91 ATOM 358 CG ASN 26 -3.978 37.246 17.936 1.00 0.91 ATOM 359 OD1 ASN 26 -4.379 37.767 18.958 1.00 0.91 ATOM 360 ND2 ASN 26 -4.101 35.943 17.775 1.00 0.91 ATOM 363 C ASN 26 -3.693 39.871 15.075 1.00 0.91 ATOM 364 O ASN 26 -3.599 41.038 15.436 1.00 0.91 ATOM 365 N GLU 27 -3.217 39.454 13.899 1.00 0.93 ATOM 367 CA GLU 27 -2.350 40.279 13.040 1.00 0.93 ATOM 369 CB GLU 27 -1.316 39.389 12.329 1.00 0.93 ATOM 372 CG GLU 27 -0.341 38.682 13.283 1.00 0.93 ATOM 375 CD GLU 27 0.397 39.642 14.245 1.00 0.93 ATOM 376 OE1 GLU 27 0.871 40.724 13.826 1.00 0.93 ATOM 377 OE2 GLU 27 0.513 39.312 15.458 1.00 0.93 ATOM 378 C GLU 27 -3.098 41.157 12.024 1.00 0.93 ATOM 379 O GLU 27 -2.710 42.305 11.829 1.00 0.93 ATOM 380 N LEU 28 -4.170 40.649 11.387 1.00 0.67 ATOM 382 CA LEU 28 -4.896 41.318 10.288 1.00 0.67 ATOM 384 CB LEU 28 -5.220 40.313 9.170 1.00 0.67 ATOM 387 CG LEU 28 -4.021 39.714 8.415 1.00 0.67 ATOM 389 CD1 LEU 28 -4.532 38.843 7.272 1.00 0.67 ATOM 393 CD2 LEU 28 -3.129 40.791 7.785 1.00 0.67 ATOM 397 C LEU 28 -6.154 42.062 10.761 1.00 0.67 ATOM 398 O LEU 28 -7.082 42.276 9.981 1.00 0.67 ATOM 399 N ARG 29 -6.234 42.399 12.048 1.00 0.72 ATOM 401 CA ARG 29 -7.464 42.919 12.672 1.00 0.72 ATOM 403 CB ARG 29 -7.422 42.644 14.177 1.00 0.72 ATOM 406 CG ARG 29 -8.829 42.772 14.779 1.00 0.72 ATOM 409 CD ARG 29 -8.933 42.179 16.183 1.00 0.72 ATOM 412 NE ARG 29 -8.671 43.175 17.247 1.00 0.72 ATOM 414 CZ ARG 29 -8.510 42.882 18.529 1.00 0.72 ATOM 415 NH1 ARG 29 -8.359 41.661 18.961 1.00 0.72 ATOM 418 NH2 ARG 29 -8.482 43.833 19.419 1.00 0.72 ATOM 421 C ARG 29 -7.718 44.379 12.278 1.00 0.72 ATOM 422 O ARG 29 -7.141 45.297 12.868 1.00 0.72 ATOM 423 N VAL 30 -8.605 44.601 11.313 1.00 0.78 ATOM 425 CA VAL 30 -8.854 45.925 10.696 1.00 0.78 ATOM 427 CB VAL 30 -9.727 45.826 9.430 1.00 0.78 ATOM 429 CG1 VAL 30 -8.999 45.043 8.345 1.00 0.78 ATOM 433 CG2 VAL 30 -11.097 45.175 9.648 1.00 0.78 ATOM 437 C VAL 30 -9.436 46.959 11.663 1.00 0.78 ATOM 438 O VAL 30 -9.195 48.162 11.482 1.00 0.78 ATOM 439 N THR 31 -10.126 46.516 12.720 1.00 1.03 ATOM 441 CA THR 31 -10.611 47.382 13.810 1.00 1.03 ATOM 443 CB THR 31 -11.591 46.625 14.701 1.00 1.03 ATOM 445 CG2 THR 31 -12.895 46.289 13.988 1.00 1.03 ATOM 449 OG1 THR 31 -11.006 45.394 15.067 1.00 1.03 ATOM 451 C THR 31 -9.470 47.919 14.693 1.00 1.03 ATOM 452 O THR 31 -9.631 48.947 15.359 1.00 1.03 ATOM 453 N GLU 32 -8.306 47.258 14.680 1.00 1.08 ATOM 455 CA GLU 32 -7.131 47.611 15.463 1.00 1.08 ATOM 457 CB GLU 32 -6.464 46.316 15.958 1.00 1.08 ATOM 460 CG GLU 32 -5.785 46.484 17.315 1.00 1.08 ATOM 463 CD GLU 32 -6.784 46.919 18.410 1.00 1.08 ATOM 464 OE1 GLU 32 -6.466 47.864 19.169 1.00 1.08 ATOM 465 OE2 GLU 32 -7.884 46.328 18.517 1.00 1.08 ATOM 466 C GLU 32 -6.155 48.506 14.689 1.00 1.08 ATOM 467 O GLU 32 -5.658 49.503 15.223 1.00 1.08 ATOM 468 N ARG 33 -5.922 48.169 13.407 1.00 0.99 ATOM 470 CA ARG 33 -5.204 49.000 12.425 1.00 0.99 ATOM 472 CB ARG 33 -3.685 48.908 12.650 1.00 0.99 ATOM 475 CG ARG 33 -3.106 47.489 12.692 1.00 0.99 ATOM 478 CD ARG 33 -1.692 47.548 13.270 1.00 0.99 ATOM 481 NE ARG 33 -1.206 46.197 13.609 1.00 0.99 ATOM 483 CZ ARG 33 -0.460 45.881 14.649 1.00 0.99 ATOM 484 NH1 ARG 33 0.015 46.771 15.481 1.00 0.99 ATOM 487 NH2 ARG 33 -0.162 44.640 14.893 1.00 0.99 ATOM 490 C ARG 33 -5.605 48.639 10.989 1.00 0.99 ATOM 491 O ARG 33 -5.859 47.467 10.725 1.00 0.99 ATOM 492 N PRO 34 -5.684 49.613 10.065 1.00 0.90 ATOM 493 CD PRO 34 -5.328 51.015 10.241 1.00 0.90 ATOM 496 CG PRO 34 -5.348 51.623 8.835 1.00 0.90 ATOM 499 CB PRO 34 -6.404 50.781 8.116 1.00 0.90 ATOM 502 CA PRO 34 -6.219 49.390 8.718 1.00 0.90 ATOM 504 C PRO 34 -5.301 48.512 7.866 1.00 0.90 ATOM 505 O PRO 34 -4.080 48.552 7.987 1.00 0.90 ATOM 506 N PHE 35 -5.912 47.749 6.943 1.00 0.73 ATOM 508 CA PHE 35 -5.201 46.934 5.952 1.00 0.73 ATOM 510 CB PHE 35 -5.283 45.436 6.307 1.00 0.73 ATOM 513 CG PHE 35 -4.286 45.019 7.365 1.00 0.73 ATOM 514 CD1 PHE 35 -4.599 45.137 8.732 1.00 0.73 ATOM 516 CE1 PHE 35 -3.665 44.781 9.715 1.00 0.73 ATOM 518 CZ PHE 35 -2.397 44.293 9.326 1.00 0.73 ATOM 520 CE2 PHE 35 -2.091 44.146 7.968 1.00 0.73 ATOM 522 CD2 PHE 35 -3.031 44.515 6.987 1.00 0.73 ATOM 524 C PHE 35 -5.724 47.198 4.544 1.00 0.73 ATOM 525 O PHE 35 -6.929 47.276 4.300 1.00 0.73 ATOM 526 N TRP 36 -4.778 47.315 3.612 1.00 0.63 ATOM 528 CA TRP 36 -4.987 47.564 2.186 1.00 0.63 ATOM 530 CB TRP 36 -3.965 48.613 1.728 1.00 0.63 ATOM 533 CG TRP 36 -3.899 49.836 2.597 1.00 0.63 ATOM 534 CD1 TRP 36 -2.824 50.265 3.299 1.00 0.63 ATOM 536 NE1 TRP 36 -3.147 51.393 4.025 1.00 0.63 ATOM 538 CE2 TRP 36 -4.473 51.748 3.829 1.00 0.63 ATOM 539 CZ2 TRP 36 -5.271 52.770 4.357 1.00 0.63 ATOM 541 CH2 TRP 36 -6.618 52.861 3.954 1.00 0.63 ATOM 543 CZ3 TRP 36 -7.146 51.922 3.053 1.00 0.63 ATOM 545 CE3 TRP 36 -6.330 50.887 2.544 1.00 0.63 ATOM 547 CD2 TRP 36 -4.969 50.771 2.917 1.00 0.63 ATOM 548 C TRP 36 -4.919 46.286 1.346 1.00 0.63 ATOM 549 O TRP 36 -5.302 46.300 0.182 1.00 0.63 ATOM 550 N ILE 37 -4.486 45.171 1.957 1.00 0.67 ATOM 552 CA ILE 37 -4.759 43.801 1.483 1.00 0.67 ATOM 554 CB ILE 37 -3.480 42.927 1.481 1.00 0.67 ATOM 556 CG2 ILE 37 -2.518 43.529 0.439 1.00 0.67 ATOM 560 CG1 ILE 37 -2.718 42.802 2.825 1.00 0.67 ATOM 563 CD1 ILE 37 -3.307 41.764 3.786 1.00 0.67 ATOM 567 C ILE 37 -5.946 43.176 2.216 1.00 0.67 ATOM 568 O ILE 37 -6.405 43.676 3.246 1.00 0.67 ATOM 569 N SER 38 -6.501 42.116 1.630 1.00 0.69 ATOM 571 CA SER 38 -7.815 41.562 1.989 1.00 0.69 ATOM 573 CB SER 38 -8.204 40.506 0.954 1.00 0.69 ATOM 576 OG SER 38 -9.591 40.243 1.030 1.00 0.69 ATOM 578 C SER 38 -7.905 41.002 3.413 1.00 0.69 ATOM 579 O SER 38 -7.389 39.930 3.721 1.00 0.69 ATOM 580 N SER 39 -8.612 41.757 4.263 1.00 0.65 ATOM 582 CA SER 39 -9.058 41.393 5.604 1.00 0.65 ATOM 584 CB SER 39 -8.076 41.881 6.673 1.00 0.65 ATOM 587 OG SER 39 -8.636 41.637 7.953 1.00 0.65 ATOM 589 C SER 39 -10.429 42.003 5.848 1.00 0.65 ATOM 590 O SER 39 -10.752 43.051 5.294 1.00 0.65 ATOM 591 N PHE 40 -11.232 41.366 6.691 1.00 0.70 ATOM 593 CA PHE 40 -12.467 41.915 7.285 1.00 0.70 ATOM 595 CB PHE 40 -13.679 41.365 6.516 1.00 0.70 ATOM 598 CG PHE 40 -13.820 39.850 6.559 1.00 0.70 ATOM 599 CD1 PHE 40 -14.606 39.242 7.546 1.00 0.70 ATOM 601 CE1 PHE 40 -14.676 37.841 7.628 1.00 0.70 ATOM 603 CZ PHE 40 -13.977 37.042 6.713 1.00 0.70 ATOM 605 CE2 PHE 40 -13.209 37.653 5.712 1.00 0.70 ATOM 607 CD2 PHE 40 -13.130 39.057 5.635 1.00 0.70 ATOM 609 C PHE 40 -12.501 41.631 8.804 1.00 0.70 ATOM 610 O PHE 40 -13.563 41.587 9.406 1.00 0.70 ATOM 611 N ILE 41 -11.333 41.369 9.397 1.00 0.62 ATOM 613 CA ILE 41 -11.220 40.776 10.733 1.00 0.62 ATOM 615 CB ILE 41 -9.852 40.070 10.874 1.00 0.62 ATOM 617 CG2 ILE 41 -9.687 39.425 12.258 1.00 0.62 ATOM 621 CG1 ILE 41 -9.590 39.005 9.771 1.00 0.62 ATOM 624 CD1 ILE 41 -10.743 38.035 9.517 1.00 0.62 ATOM 628 C ILE 41 -11.443 41.833 11.815 1.00 0.62 ATOM 629 O ILE 41 -10.659 42.762 11.942 1.00 0.62 ATOM 630 N GLY 42 -12.487 41.664 12.634 1.00 0.77 ATOM 632 CA GLY 42 -12.769 42.504 13.803 1.00 0.77 ATOM 635 C GLY 42 -12.674 41.770 15.152 1.00 0.77 ATOM 636 O GLY 42 -12.745 42.402 16.200 1.00 0.77 ATOM 637 N ARG 43 -12.480 40.431 15.129 1.00 0.76 ATOM 639 CA ARG 43 -12.504 39.532 16.299 1.00 0.76 ATOM 641 CB ARG 43 -13.514 38.407 16.011 1.00 0.76 ATOM 644 CG ARG 43 -14.960 38.759 16.375 1.00 0.76 ATOM 647 CD ARG 43 -15.262 38.486 17.855 1.00 0.76 ATOM 650 NE ARG 43 -16.693 38.226 18.030 1.00 0.76 ATOM 652 CZ ARG 43 -17.276 37.651 19.082 1.00 0.76 ATOM 653 NH1 ARG 43 -16.628 37.409 20.188 1.00 0.76 ATOM 656 NH2 ARG 43 -18.531 37.310 19.013 1.00 0.76 ATOM 659 C ARG 43 -11.148 38.900 16.609 1.00 0.76 ATOM 660 O ARG 43 -10.387 38.579 15.698 1.00 0.76 ATOM 661 N SER 44 -10.898 38.625 17.893 1.00 0.88 ATOM 663 CA SER 44 -9.665 37.980 18.410 1.00 0.88 ATOM 665 CB SER 44 -9.544 38.206 19.919 1.00 0.88 ATOM 668 OG SER 44 -9.839 39.549 20.248 1.00 0.88 ATOM 670 C SER 44 -9.569 36.471 18.173 1.00 0.88 ATOM 671 O SER 44 -8.485 35.912 18.371 1.00 0.88 ATOM 672 N LYS 45 -10.668 35.790 17.797 1.00 0.89 ATOM 674 CA LYS 45 -10.646 34.348 17.502 1.00 0.89 ATOM 676 CB LYS 45 -10.975 33.517 18.750 1.00 0.89 ATOM 679 CG LYS 45 -12.443 33.483 19.175 1.00 0.89 ATOM 682 CD LYS 45 -12.578 32.513 20.351 1.00 0.89 ATOM 685 CE LYS 45 -14.040 32.331 20.770 1.00 0.89 ATOM 688 NZ LYS 45 -14.165 31.321 21.867 1.00 0.89 ATOM 692 C LYS 45 -11.466 33.950 16.283 1.00 0.89 ATOM 693 O LYS 45 -12.406 34.635 15.879 1.00 0.89 TER END