####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS097_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 2 - 25 4.87 9.87 LCS_AVERAGE: 50.41 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 9 19 - 27 1.98 12.75 LONGEST_CONTINUOUS_SEGMENT: 9 20 - 28 1.34 13.54 LONGEST_CONTINUOUS_SEGMENT: 9 35 - 43 1.95 18.36 LONGEST_CONTINUOUS_SEGMENT: 9 36 - 44 1.67 18.33 LCS_AVERAGE: 17.10 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.44 14.04 LCS_AVERAGE: 12.35 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 5 24 3 3 4 7 7 9 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT V 3 V 3 4 6 24 3 4 4 5 6 8 11 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT Q 4 Q 4 5 6 24 3 4 5 7 7 9 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT G 5 G 5 5 6 24 3 4 5 5 6 7 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT P 6 P 6 5 6 24 3 4 5 5 6 7 8 12 14 19 21 26 28 29 31 34 35 35 36 37 LCS_GDT W 7 W 7 5 6 24 3 4 5 7 7 9 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT V 8 V 8 5 6 24 3 4 5 5 7 7 11 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT G 9 G 9 3 4 24 3 3 3 5 7 7 11 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT S 10 S 10 3 4 24 3 3 3 4 7 7 11 12 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT S 11 S 11 3 8 24 3 3 4 5 5 7 11 12 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT Y 12 Y 12 7 8 24 5 5 7 7 7 8 9 10 13 16 18 23 28 29 31 34 35 35 36 37 LCS_GDT V 13 V 13 7 8 24 5 5 7 7 7 9 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT A 14 A 14 7 8 24 5 5 7 7 7 9 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT E 15 E 15 7 8 24 5 5 7 7 7 9 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT T 16 T 16 7 8 24 5 5 7 7 7 8 8 10 11 16 20 22 28 29 31 34 35 35 36 37 LCS_GDT G 17 G 17 7 8 24 4 5 7 7 7 8 9 10 12 13 16 19 23 28 31 34 35 35 36 37 LCS_GDT Q 18 Q 18 7 8 24 4 4 7 7 7 8 9 10 15 18 22 26 28 29 31 34 35 35 36 37 LCS_GDT N 19 N 19 5 9 24 3 4 5 5 8 10 11 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT W 20 W 20 8 9 24 7 9 9 9 10 10 11 11 16 18 20 23 28 29 31 34 35 35 36 37 LCS_GDT A 21 A 21 8 9 24 7 9 9 9 10 10 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT S 22 S 22 8 9 24 7 9 9 9 10 10 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT L 23 L 23 8 9 24 7 9 9 9 10 10 12 13 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT A 24 A 24 8 9 24 7 9 9 9 10 10 11 12 15 19 22 26 27 29 31 34 35 35 36 37 LCS_GDT A 25 A 25 8 9 24 7 9 9 9 10 10 11 12 14 19 20 24 27 29 31 34 35 35 36 37 LCS_GDT N 26 N 26 8 9 20 7 9 9 9 10 10 11 11 14 19 20 23 27 29 31 34 35 35 36 37 LCS_GDT E 27 E 27 8 9 20 3 9 9 9 10 10 11 12 13 15 19 21 24 27 31 34 35 35 36 37 LCS_GDT L 28 L 28 5 9 20 3 4 5 9 10 10 12 14 15 16 16 20 23 27 29 31 35 35 36 37 LCS_GDT R 29 R 29 5 5 20 3 4 5 6 8 10 12 14 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT V 30 V 30 5 6 20 3 4 5 6 10 10 12 14 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT T 31 T 31 5 6 20 3 4 5 7 10 10 12 14 16 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT E 32 E 32 5 6 20 2 4 5 6 7 10 11 14 16 18 22 26 28 29 31 34 35 35 36 37 LCS_GDT R 33 R 33 3 6 20 2 3 4 7 10 10 12 14 15 16 18 22 24 26 31 32 35 35 36 37 LCS_GDT P 34 P 34 3 6 20 2 3 4 6 7 10 11 14 15 16 16 22 24 28 31 34 35 35 36 37 LCS_GDT F 35 F 35 3 9 20 3 3 4 6 7 10 12 14 15 20 22 26 28 29 31 34 35 35 36 37 LCS_GDT W 36 W 36 5 9 20 4 4 5 6 8 9 11 12 16 19 22 26 28 29 31 34 35 35 36 37 LCS_GDT I 37 I 37 5 9 20 4 5 7 9 10 10 12 14 16 19 22 26 28 29 31 34 35 35 36 37 LCS_GDT S 38 S 38 5 9 20 4 5 7 7 10 10 12 14 15 19 20 24 27 29 31 33 35 35 36 37 LCS_GDT S 39 S 39 5 9 20 4 5 7 7 10 10 12 14 15 16 16 19 22 27 29 33 35 35 36 36 LCS_GDT F 40 F 40 5 9 20 3 9 9 9 10 10 12 14 15 16 16 17 18 22 27 29 33 35 36 36 LCS_GDT I 41 I 41 5 9 20 3 5 7 7 10 10 12 14 15 16 16 17 18 18 20 21 21 23 26 27 LCS_GDT G 42 G 42 5 9 20 3 4 7 7 10 10 12 14 15 16 16 17 18 18 20 21 21 23 23 25 LCS_GDT R 43 R 43 5 9 20 3 4 7 7 10 10 12 14 15 16 16 17 18 18 20 21 21 22 22 23 LCS_GDT S 44 S 44 3 9 20 0 3 4 6 8 9 12 14 14 15 16 17 18 18 19 21 21 22 22 23 LCS_GDT K 45 K 45 3 3 20 0 3 3 3 3 3 6 6 8 10 10 14 14 16 19 20 20 22 22 23 LCS_AVERAGE LCS_A: 26.62 ( 12.35 17.10 50.41 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 9 9 10 10 12 14 16 20 22 26 28 29 31 34 35 35 36 37 GDT PERCENT_AT 15.91 20.45 20.45 20.45 22.73 22.73 27.27 31.82 36.36 45.45 50.00 59.09 63.64 65.91 70.45 77.27 79.55 79.55 81.82 84.09 GDT RMS_LOCAL 0.14 0.52 0.52 0.52 1.35 1.35 2.19 2.62 3.21 3.73 3.97 4.38 4.61 4.69 4.98 5.42 5.58 5.53 5.75 5.91 GDT RMS_ALL_AT 13.97 13.99 13.99 13.99 13.52 13.52 18.24 18.45 9.65 9.93 9.87 9.89 10.11 10.04 10.15 9.75 9.90 9.66 9.37 9.68 # Checking swapping # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 27.480 0 0.152 0.199 28.923 0.000 0.000 - LGA V 3 V 3 27.532 0 0.639 0.494 28.638 0.000 0.000 27.904 LGA Q 4 Q 4 25.773 0 0.060 0.927 33.236 0.000 0.000 33.236 LGA G 5 G 5 20.482 0 0.051 0.051 22.710 0.000 0.000 - LGA P 6 P 6 17.975 0 0.035 0.387 20.069 0.000 0.000 18.730 LGA W 7 W 7 20.289 0 0.475 1.169 26.645 0.000 0.000 26.645 LGA V 8 V 8 22.190 0 0.031 1.005 24.403 0.000 0.000 21.265 LGA G 9 G 9 23.566 0 0.273 0.273 27.472 0.000 0.000 - LGA S 10 S 10 30.776 0 0.225 0.560 33.802 0.000 0.000 30.695 LGA S 11 S 11 30.391 0 0.540 0.579 30.559 0.000 0.000 30.559 LGA Y 12 Y 12 28.301 0 0.626 1.024 30.305 0.000 0.000 30.305 LGA V 13 V 13 28.310 0 0.099 1.104 30.395 0.000 0.000 30.395 LGA A 14 A 14 30.461 0 0.101 0.095 31.530 0.000 0.000 - LGA E 15 E 15 30.187 0 0.086 0.718 33.555 0.000 0.000 31.825 LGA T 16 T 16 27.253 0 0.119 0.161 28.117 0.000 0.000 26.256 LGA G 17 G 17 26.934 0 0.085 0.085 27.226 0.000 0.000 - LGA Q 18 Q 18 24.364 0 0.668 0.868 29.929 0.000 0.000 28.260 LGA N 19 N 19 26.234 0 0.054 1.089 32.115 0.000 0.000 32.115 LGA W 20 W 20 21.807 0 0.598 1.252 26.672 0.000 0.000 26.672 LGA A 21 A 21 15.414 0 0.054 0.064 17.806 0.000 0.000 - LGA S 22 S 22 18.513 0 0.052 0.059 22.653 0.000 0.000 22.653 LGA L 23 L 23 19.819 0 0.086 0.176 25.867 0.000 0.000 25.867 LGA A 24 A 24 14.045 0 0.093 0.095 16.285 0.000 0.000 - LGA A 25 A 25 11.672 0 0.157 0.153 12.791 0.000 0.000 - LGA N 26 N 26 15.264 0 0.089 0.508 21.076 0.000 0.000 19.621 LGA E 27 E 27 13.423 0 0.656 1.433 20.298 0.000 0.000 20.298 LGA L 28 L 28 7.777 0 0.245 0.255 10.938 0.000 0.000 10.938 LGA R 29 R 29 6.905 0 0.108 1.713 15.381 1.818 0.661 13.242 LGA V 30 V 30 3.167 0 0.082 1.016 7.285 10.909 6.234 7.285 LGA T 31 T 31 1.631 0 0.697 1.333 5.755 48.636 30.649 4.509 LGA E 32 E 32 4.215 0 0.680 1.192 9.790 22.273 9.899 8.663 LGA R 33 R 33 1.808 0 0.094 0.973 11.376 31.818 12.727 11.376 LGA P 34 P 34 3.863 0 0.675 0.616 4.992 8.636 9.610 3.840 LGA F 35 F 35 3.466 0 0.602 1.421 11.071 10.455 3.967 11.071 LGA W 36 W 36 5.795 0 0.615 1.229 17.328 4.545 1.299 17.328 LGA I 37 I 37 3.164 0 0.072 0.946 5.195 28.182 15.909 4.933 LGA S 38 S 38 2.498 0 0.073 0.632 3.474 49.091 38.788 3.474 LGA S 39 S 39 0.923 0 0.028 0.153 1.976 74.091 66.364 1.976 LGA F 40 F 40 0.891 0 0.077 1.073 5.567 81.818 45.950 5.090 LGA I 41 I 41 1.649 0 0.621 1.518 4.268 44.545 35.909 4.268 LGA G 42 G 42 1.709 0 0.141 0.141 1.709 61.818 61.818 - LGA R 43 R 43 0.697 0 0.607 1.442 4.968 66.818 52.562 4.968 LGA S 44 S 44 3.425 0 0.654 0.763 6.906 11.364 7.576 6.114 LGA K 45 K 45 10.079 0 0.517 0.714 18.344 0.000 0.000 18.344 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 9.055 9.182 10.206 12.655 9.089 2.597 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 14 2.62 37.500 31.457 0.514 LGA_LOCAL RMSD: 2.624 Number of atoms: 14 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 18.449 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 9.055 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.252986 * X + 0.040004 * Y + 0.966642 * Z + 0.984959 Y_new = 0.207889 * X + 0.978053 * Y + 0.013931 * Z + 43.620499 Z_new = -0.944870 * X + 0.204479 * Y + -0.255750 * Z + -1.353138 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 2.453735 1.237199 2.467141 [DEG: 140.5887 70.8863 141.3568 ] ZXZ: 1.585207 1.829420 -1.357674 [DEG: 90.8257 104.8181 -77.7890 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS097_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS097_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 14 2.62 31.457 9.06 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS097_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 20 N ALA 2 -8.822 55.704 11.763 1.00 2.90 ATOM 22 CA ALA 2 -8.840 55.496 10.315 1.00 2.90 ATOM 24 CB ALA 2 -7.626 54.648 9.930 1.00 2.90 ATOM 28 C ALA 2 -10.141 54.807 9.855 1.00 2.90 ATOM 29 O ALA 2 -10.465 53.707 10.292 1.00 2.90 ATOM 30 N VAL 3 -10.875 55.464 8.958 1.00 1.71 ATOM 32 CA VAL 3 -12.101 54.904 8.358 1.00 1.71 ATOM 34 CB VAL 3 -13.114 56.026 8.030 1.00 1.71 ATOM 36 CG1 VAL 3 -14.540 55.478 8.048 1.00 1.71 ATOM 40 CG2 VAL 3 -13.082 57.184 9.038 1.00 1.71 ATOM 44 C VAL 3 -11.789 54.069 7.107 1.00 1.71 ATOM 45 O VAL 3 -12.643 53.366 6.578 1.00 1.71 ATOM 46 N GLN 4 -10.540 54.148 6.631 1.00 0.87 ATOM 48 CA GLN 4 -10.054 53.560 5.387 1.00 0.87 ATOM 50 CB GLN 4 -10.002 54.671 4.316 1.00 0.87 ATOM 53 CG GLN 4 -9.078 55.857 4.626 1.00 0.87 ATOM 56 CD GLN 4 -9.455 57.072 3.777 1.00 0.87 ATOM 57 OE1 GLN 4 -10.385 57.801 4.092 1.00 0.87 ATOM 58 NE2 GLN 4 -8.776 57.345 2.682 1.00 0.87 ATOM 61 C GLN 4 -8.714 52.857 5.604 1.00 0.87 ATOM 62 O GLN 4 -8.021 53.102 6.594 1.00 0.87 ATOM 63 N GLY 5 -8.356 51.972 4.679 1.00 0.57 ATOM 65 CA GLY 5 -7.102 51.215 4.727 1.00 0.57 ATOM 68 C GLY 5 -6.294 51.318 3.443 1.00 0.57 ATOM 69 O GLY 5 -6.734 51.936 2.480 1.00 0.57 ATOM 70 N PRO 6 -5.127 50.633 3.361 1.00 0.49 ATOM 71 CD PRO 6 -4.502 49.862 4.431 1.00 0.49 ATOM 74 CG PRO 6 -3.002 49.980 4.162 1.00 0.49 ATOM 77 CB PRO 6 -2.962 49.951 2.631 1.00 0.49 ATOM 80 CA PRO 6 -4.210 50.742 2.219 1.00 0.49 ATOM 82 C PRO 6 -4.766 50.259 0.875 1.00 0.49 ATOM 83 O PRO 6 -4.227 50.586 -0.161 1.00 0.49 ATOM 84 N TRP 7 -5.881 49.506 0.880 1.00 0.56 ATOM 86 CA TRP 7 -6.638 49.083 -0.322 1.00 0.56 ATOM 88 CB TRP 7 -7.713 48.070 0.134 1.00 0.56 ATOM 91 CG TRP 7 -8.397 48.388 1.435 1.00 0.56 ATOM 92 CD1 TRP 7 -8.008 47.925 2.647 1.00 0.56 ATOM 94 NE1 TRP 7 -8.822 48.458 3.628 1.00 0.56 ATOM 96 CE2 TRP 7 -9.800 49.262 3.104 1.00 0.56 ATOM 97 CZ2 TRP 7 -10.837 49.992 3.680 1.00 0.56 ATOM 99 CH2 TRP 7 -11.706 50.731 2.858 1.00 0.56 ATOM 101 CZ3 TRP 7 -11.518 50.709 1.459 1.00 0.56 ATOM 103 CE3 TRP 7 -10.469 49.958 0.885 1.00 0.56 ATOM 105 CD2 TRP 7 -9.573 49.222 1.690 1.00 0.56 ATOM 106 C TRP 7 -7.239 50.236 -1.125 1.00 0.56 ATOM 107 O TRP 7 -7.243 50.176 -2.354 1.00 0.56 ATOM 108 N VAL 8 -7.667 51.310 -0.456 1.00 0.54 ATOM 110 CA VAL 8 -8.071 52.594 -1.092 1.00 0.54 ATOM 112 CB VAL 8 -9.463 53.035 -0.580 1.00 0.54 ATOM 114 CG1 VAL 8 -9.502 53.304 0.929 1.00 0.54 ATOM 118 CG2 VAL 8 -10.027 54.255 -1.315 1.00 0.54 ATOM 122 C VAL 8 -6.999 53.672 -0.930 1.00 0.54 ATOM 123 O VAL 8 -6.793 54.465 -1.827 1.00 0.54 ATOM 124 N GLY 9 -6.260 53.655 0.180 1.00 0.58 ATOM 126 CA GLY 9 -5.116 54.552 0.410 1.00 0.58 ATOM 129 C GLY 9 -5.520 56.016 0.332 1.00 0.58 ATOM 130 O GLY 9 -6.350 56.466 1.130 1.00 0.58 ATOM 131 N SER 10 -4.983 56.731 -0.649 1.00 0.78 ATOM 133 CA SER 10 -5.417 58.077 -1.083 1.00 0.78 ATOM 135 CB SER 10 -6.766 57.946 -1.809 1.00 0.78 ATOM 138 OG SER 10 -6.669 56.958 -2.825 1.00 0.78 ATOM 140 C SER 10 -5.400 59.164 0.019 1.00 0.78 ATOM 141 O SER 10 -6.031 60.211 -0.121 1.00 0.78 ATOM 142 N SER 11 -4.670 58.904 1.121 1.00 0.78 ATOM 144 CA SER 11 -4.533 59.764 2.311 1.00 0.78 ATOM 146 CB SER 11 -5.794 59.626 3.168 1.00 0.78 ATOM 149 OG SER 11 -5.846 60.704 4.086 1.00 0.78 ATOM 151 C SER 11 -3.254 59.415 3.098 1.00 0.78 ATOM 152 O SER 11 -2.413 58.638 2.638 1.00 0.78 ATOM 153 N TYR 12 -3.086 60.020 4.276 1.00 0.80 ATOM 155 CA TYR 12 -1.867 59.985 5.085 1.00 0.80 ATOM 157 CB TYR 12 -1.904 61.200 6.029 1.00 0.80 ATOM 160 CG TYR 12 -0.660 61.393 6.871 1.00 0.80 ATOM 161 CD1 TYR 12 -0.722 61.226 8.269 1.00 0.80 ATOM 163 CE1 TYR 12 0.433 61.404 9.047 1.00 0.80 ATOM 165 CZ TYR 12 1.655 61.756 8.448 1.00 0.80 ATOM 166 OH TYR 12 2.764 61.940 9.207 1.00 0.80 ATOM 168 CE2 TYR 12 1.717 61.913 7.048 1.00 0.80 ATOM 170 CD2 TYR 12 0.560 61.736 6.260 1.00 0.80 ATOM 172 C TYR 12 -1.659 58.664 5.840 1.00 0.80 ATOM 173 O TYR 12 -2.617 57.947 6.129 1.00 0.80 ATOM 174 N VAL 13 -0.423 58.337 6.231 1.00 0.73 ATOM 176 CA VAL 13 -0.061 57.010 6.784 1.00 0.73 ATOM 178 CB VAL 13 1.470 56.855 6.932 1.00 0.73 ATOM 180 CG1 VAL 13 2.163 56.877 5.566 1.00 0.73 ATOM 184 CG2 VAL 13 2.121 57.943 7.812 1.00 0.73 ATOM 188 C VAL 13 -0.764 56.632 8.095 1.00 0.73 ATOM 189 O VAL 13 -1.031 55.463 8.312 1.00 0.73 ATOM 190 N ALA 14 -1.105 57.616 8.932 1.00 0.86 ATOM 192 CA ALA 14 -1.921 57.397 10.140 1.00 0.86 ATOM 194 CB ALA 14 -1.507 58.463 11.173 1.00 0.86 ATOM 198 C ALA 14 -3.442 57.425 9.865 1.00 0.86 ATOM 199 O ALA 14 -4.228 56.850 10.616 1.00 0.86 ATOM 200 N GLU 15 -3.851 58.044 8.745 1.00 0.84 ATOM 202 CA GLU 15 -5.247 58.075 8.279 1.00 0.84 ATOM 204 CB GLU 15 -5.403 59.306 7.364 1.00 0.84 ATOM 207 CG GLU 15 -6.819 59.885 7.363 1.00 0.84 ATOM 210 CD GLU 15 -7.127 60.669 8.665 1.00 0.84 ATOM 211 OE1 GLU 15 -6.838 61.881 8.728 1.00 0.84 ATOM 212 OE2 GLU 15 -7.662 60.072 9.619 1.00 0.84 ATOM 213 C GLU 15 -5.643 56.796 7.533 1.00 0.84 ATOM 214 O GLU 15 -6.818 56.460 7.413 1.00 0.84 ATOM 215 N THR 16 -4.626 56.061 7.035 1.00 0.71 ATOM 217 CA THR 16 -4.747 54.832 6.236 1.00 0.71 ATOM 219 CB THR 16 -3.895 54.980 4.971 1.00 0.71 ATOM 221 CG2 THR 16 -4.439 56.038 4.027 1.00 0.71 ATOM 225 OG1 THR 16 -2.611 55.421 5.349 1.00 0.71 ATOM 227 C THR 16 -4.330 53.571 7.001 1.00 0.71 ATOM 228 O THR 16 -4.272 52.494 6.420 1.00 0.71 ATOM 229 N GLY 17 -3.982 53.677 8.285 1.00 0.71 ATOM 231 CA GLY 17 -3.615 52.532 9.142 1.00 0.71 ATOM 234 C GLY 17 -2.207 51.970 8.916 1.00 0.71 ATOM 235 O GLY 17 -1.736 51.170 9.715 1.00 0.71 ATOM 236 N GLN 18 -1.468 52.407 7.904 1.00 0.62 ATOM 238 CA GLN 18 -0.119 51.842 7.652 1.00 0.62 ATOM 240 CB GLN 18 0.262 52.013 6.169 1.00 0.62 ATOM 243 CG GLN 18 0.262 53.459 5.662 1.00 0.62 ATOM 246 CD GLN 18 0.312 53.561 4.136 1.00 0.62 ATOM 247 OE1 GLN 18 1.136 52.962 3.466 1.00 0.62 ATOM 248 NE2 GLN 18 -0.571 54.336 3.538 1.00 0.62 ATOM 251 C GLN 18 0.929 52.302 8.668 1.00 0.62 ATOM 252 O GLN 18 1.900 51.591 8.897 1.00 0.62 ATOM 253 N ASN 19 0.710 53.419 9.385 1.00 0.69 ATOM 255 CA ASN 19 1.492 53.736 10.600 1.00 0.69 ATOM 257 CB ASN 19 1.340 55.246 10.889 1.00 0.69 ATOM 260 CG ASN 19 2.050 55.699 12.153 1.00 0.69 ATOM 261 OD1 ASN 19 1.462 56.272 13.050 1.00 0.69 ATOM 262 ND2 ASN 19 3.345 55.470 12.264 1.00 0.69 ATOM 265 C ASN 19 1.093 52.874 11.819 1.00 0.69 ATOM 266 O ASN 19 1.868 52.679 12.744 1.00 0.69 ATOM 267 N TRP 20 -0.107 52.295 11.791 1.00 0.75 ATOM 269 CA TRP 20 -0.557 51.333 12.811 1.00 0.75 ATOM 271 CB TRP 20 -2.064 51.152 12.699 1.00 0.75 ATOM 274 CG TRP 20 -2.706 50.721 13.961 1.00 0.75 ATOM 275 CD1 TRP 20 -2.736 49.465 14.444 1.00 0.75 ATOM 277 NE1 TRP 20 -3.411 49.446 15.647 1.00 0.75 ATOM 279 CE2 TRP 20 -3.844 50.699 15.997 1.00 0.75 ATOM 280 CZ2 TRP 20 -4.550 51.181 17.107 1.00 0.75 ATOM 282 CH2 TRP 20 -4.821 52.558 17.175 1.00 0.75 ATOM 284 CZ3 TRP 20 -4.379 53.418 16.156 1.00 0.75 ATOM 286 CE3 TRP 20 -3.670 52.914 15.051 1.00 0.75 ATOM 288 CD2 TRP 20 -3.388 51.544 14.949 1.00 0.75 ATOM 289 C TRP 20 0.167 49.995 12.662 1.00 0.75 ATOM 290 O TRP 20 0.650 49.425 13.634 1.00 0.75 ATOM 291 N ALA 21 0.319 49.555 11.413 1.00 0.63 ATOM 293 CA ALA 21 1.081 48.350 11.060 1.00 0.63 ATOM 295 CB ALA 21 0.838 48.056 9.579 1.00 0.63 ATOM 299 C ALA 21 2.578 48.482 11.408 1.00 0.63 ATOM 300 O ALA 21 3.158 47.538 11.945 1.00 0.63 ATOM 301 N SER 22 3.202 49.643 11.211 1.00 0.69 ATOM 303 CA SER 22 4.629 49.837 11.570 1.00 0.69 ATOM 305 CB SER 22 5.209 51.056 10.857 1.00 0.69 ATOM 308 OG SER 22 4.416 52.169 11.166 1.00 0.69 ATOM 310 C SER 22 4.857 49.896 13.099 1.00 0.69 ATOM 311 O SER 22 5.897 49.439 13.566 1.00 0.69 ATOM 312 N LEU 23 3.881 50.333 13.890 1.00 0.78 ATOM 314 CA LEU 23 3.886 50.131 15.347 1.00 0.78 ATOM 316 CB LEU 23 2.809 50.996 16.016 1.00 0.78 ATOM 319 CG LEU 23 3.113 52.503 16.034 1.00 0.78 ATOM 321 CD1 LEU 23 1.916 53.263 16.595 1.00 0.78 ATOM 325 CD2 LEU 23 4.325 52.851 16.918 1.00 0.78 ATOM 329 C LEU 23 3.705 48.650 15.715 1.00 0.78 ATOM 330 O LEU 23 4.508 48.117 16.494 1.00 0.78 ATOM 331 N ALA 24 2.731 47.964 15.127 1.00 0.72 ATOM 333 CA ALA 24 2.482 46.536 15.356 1.00 0.72 ATOM 335 CB ALA 24 1.189 46.147 14.632 1.00 0.72 ATOM 339 C ALA 24 3.654 45.627 14.926 1.00 0.72 ATOM 340 O ALA 24 3.789 44.517 15.418 1.00 0.72 ATOM 341 N ALA 25 4.528 46.105 14.035 1.00 0.74 ATOM 343 CA ALA 25 5.762 45.398 13.655 1.00 0.74 ATOM 345 CB ALA 25 6.240 46.003 12.327 1.00 0.74 ATOM 349 C ALA 25 6.862 45.455 14.728 1.00 0.74 ATOM 350 O ALA 25 7.803 44.660 14.682 1.00 0.74 ATOM 351 N ASN 26 6.771 46.383 15.687 1.00 0.95 ATOM 353 CA ASN 26 7.754 46.611 16.754 1.00 0.95 ATOM 355 CB ASN 26 8.199 48.083 16.716 1.00 0.95 ATOM 358 CG ASN 26 9.068 48.379 15.522 1.00 0.95 ATOM 359 OD1 ASN 26 10.251 48.076 15.519 1.00 0.95 ATOM 360 ND2 ASN 26 8.543 48.958 14.467 1.00 0.95 ATOM 363 C ASN 26 7.210 46.278 18.160 1.00 0.95 ATOM 364 O ASN 26 8.003 45.994 19.071 1.00 0.95 ATOM 365 N GLU 27 5.895 46.332 18.355 1.00 0.95 ATOM 367 CA GLU 27 5.248 46.331 19.660 1.00 0.95 ATOM 369 CB GLU 27 4.962 47.799 20.028 1.00 0.95 ATOM 372 CG GLU 27 4.557 48.002 21.483 1.00 0.95 ATOM 375 CD GLU 27 4.598 49.502 21.834 1.00 0.95 ATOM 376 OE1 GLU 27 5.561 49.949 22.489 1.00 0.95 ATOM 377 OE2 GLU 27 3.646 50.226 21.444 1.00 0.95 ATOM 378 C GLU 27 3.975 45.464 19.652 1.00 0.95 ATOM 379 O GLU 27 3.340 45.309 18.613 1.00 0.95 ATOM 380 N LEU 28 3.595 44.901 20.804 1.00 1.17 ATOM 382 CA LEU 28 2.490 43.921 20.916 1.00 1.17 ATOM 384 CB LEU 28 2.719 42.995 22.122 1.00 1.17 ATOM 387 CG LEU 28 4.036 42.182 22.088 1.00 1.17 ATOM 389 CD1 LEU 28 4.119 41.285 23.329 1.00 1.17 ATOM 393 CD2 LEU 28 4.140 41.277 20.867 1.00 1.17 ATOM 397 C LEU 28 1.087 44.578 20.886 1.00 1.17 ATOM 398 O LEU 28 0.262 44.403 21.788 1.00 1.17 ATOM 399 N ARG 29 0.822 45.315 19.807 1.00 1.17 ATOM 401 CA ARG 29 -0.462 45.974 19.449 1.00 1.17 ATOM 403 CB ARG 29 -0.174 47.080 18.409 1.00 1.17 ATOM 406 CG ARG 29 0.763 48.201 18.881 1.00 1.17 ATOM 409 CD ARG 29 0.085 49.094 19.925 1.00 1.17 ATOM 412 NE ARG 29 1.004 50.160 20.369 1.00 1.17 ATOM 414 CZ ARG 29 0.737 51.439 20.563 1.00 1.17 ATOM 415 NH1 ARG 29 -0.422 51.987 20.317 1.00 1.17 ATOM 418 NH2 ARG 29 1.690 52.169 21.040 1.00 1.17 ATOM 421 C ARG 29 -1.502 44.957 18.943 1.00 1.17 ATOM 422 O ARG 29 -2.079 45.134 17.866 1.00 1.17 ATOM 423 N VAL 30 -1.712 43.879 19.693 1.00 1.22 ATOM 425 CA VAL 30 -2.560 42.752 19.281 1.00 1.22 ATOM 427 CB VAL 30 -2.413 41.564 20.239 1.00 1.22 ATOM 429 CG1 VAL 30 -2.920 41.829 21.661 1.00 1.22 ATOM 433 CG2 VAL 30 -3.125 40.323 19.712 1.00 1.22 ATOM 437 C VAL 30 -4.021 43.195 19.060 1.00 1.22 ATOM 438 O VAL 30 -4.631 43.877 19.882 1.00 1.22 ATOM 439 N THR 31 -4.572 42.817 17.897 1.00 1.17 ATOM 441 CA THR 31 -5.930 43.163 17.437 1.00 1.17 ATOM 443 CB THR 31 -5.968 44.593 16.862 1.00 1.17 ATOM 445 CG2 THR 31 -5.029 44.841 15.692 1.00 1.17 ATOM 449 OG1 THR 31 -7.260 44.882 16.372 1.00 1.17 ATOM 451 C THR 31 -6.426 42.142 16.403 1.00 1.17 ATOM 452 O THR 31 -5.629 41.470 15.746 1.00 1.17 ATOM 453 N GLU 32 -7.749 42.044 16.249 1.00 1.30 ATOM 455 CA GLU 32 -8.412 41.261 15.185 1.00 1.30 ATOM 457 CB GLU 32 -9.943 41.163 15.415 1.00 1.30 ATOM 460 CG GLU 32 -10.539 41.872 16.641 1.00 1.30 ATOM 463 CD GLU 32 -10.138 41.210 17.965 1.00 1.30 ATOM 464 OE1 GLU 32 -10.528 40.047 18.226 1.00 1.30 ATOM 465 OE2 GLU 32 -9.438 41.872 18.770 1.00 1.30 ATOM 466 C GLU 32 -8.163 41.822 13.771 1.00 1.30 ATOM 467 O GLU 32 -8.423 41.128 12.789 1.00 1.30 ATOM 468 N ARG 33 -7.738 43.088 13.650 1.00 1.04 ATOM 470 CA ARG 33 -7.693 43.824 12.371 1.00 1.04 ATOM 472 CB ARG 33 -7.854 45.331 12.629 1.00 1.04 ATOM 475 CG ARG 33 -9.233 45.611 13.219 1.00 1.04 ATOM 478 CD ARG 33 -9.488 47.107 13.352 1.00 1.04 ATOM 481 NE ARG 33 -10.827 47.314 13.894 1.00 1.04 ATOM 483 CZ ARG 33 -11.212 47.884 15.011 1.00 1.04 ATOM 484 NH1 ARG 33 -10.402 48.486 15.837 1.00 1.04 ATOM 487 NH2 ARG 33 -12.472 47.806 15.289 1.00 1.04 ATOM 490 C ARG 33 -6.454 43.500 11.524 1.00 1.04 ATOM 491 O ARG 33 -5.410 43.155 12.089 1.00 1.04 ATOM 492 N PRO 34 -6.490 43.679 10.186 1.00 0.82 ATOM 493 CD PRO 34 -7.652 44.060 9.375 1.00 0.82 ATOM 496 CG PRO 34 -7.465 43.349 8.046 1.00 0.82 ATOM 499 CB PRO 34 -5.952 43.397 7.863 1.00 0.82 ATOM 502 CA PRO 34 -5.417 43.220 9.290 1.00 0.82 ATOM 504 C PRO 34 -4.059 43.896 9.456 1.00 0.82 ATOM 505 O PRO 34 -3.086 43.329 8.997 1.00 0.82 ATOM 506 N PHE 35 -3.916 45.018 10.173 1.00 0.74 ATOM 508 CA PHE 35 -2.588 45.582 10.492 1.00 0.74 ATOM 510 CB PHE 35 -2.656 46.855 11.361 1.00 0.74 ATOM 513 CG PHE 35 -3.955 47.630 11.382 1.00 0.74 ATOM 514 CD1 PHE 35 -4.281 48.480 10.313 1.00 0.74 ATOM 516 CE1 PHE 35 -5.442 49.270 10.384 1.00 0.74 ATOM 518 CZ PHE 35 -6.270 49.210 11.514 1.00 0.74 ATOM 520 CE2 PHE 35 -5.946 48.362 12.574 1.00 0.74 ATOM 522 CD2 PHE 35 -4.795 47.563 12.503 1.00 0.74 ATOM 524 C PHE 35 -1.720 44.580 11.256 1.00 0.74 ATOM 525 O PHE 35 -0.544 44.439 10.963 1.00 0.74 ATOM 526 N TRP 36 -2.307 43.801 12.162 1.00 0.77 ATOM 528 CA TRP 36 -1.596 42.788 12.956 1.00 0.77 ATOM 530 CB TRP 36 -2.568 42.287 14.026 1.00 0.77 ATOM 533 CG TRP 36 -2.002 41.310 15.015 1.00 0.77 ATOM 534 CD1 TRP 36 -2.364 40.010 15.143 1.00 0.77 ATOM 536 NE1 TRP 36 -1.633 39.422 16.151 1.00 0.77 ATOM 538 CE2 TRP 36 -0.766 40.326 16.742 1.00 0.77 ATOM 539 CZ2 TRP 36 0.153 40.224 17.786 1.00 0.77 ATOM 541 CH2 TRP 36 0.906 41.354 18.151 1.00 0.77 ATOM 543 CZ3 TRP 36 0.717 42.569 17.463 1.00 0.77 ATOM 545 CE3 TRP 36 -0.231 42.671 16.427 1.00 0.77 ATOM 547 CD2 TRP 36 -0.991 41.547 16.034 1.00 0.77 ATOM 548 C TRP 36 -1.055 41.649 12.084 1.00 0.77 ATOM 549 O TRP 36 0.084 41.239 12.260 1.00 0.77 ATOM 550 N ILE 37 -1.823 41.227 11.075 1.00 0.79 ATOM 552 CA ILE 37 -1.428 40.201 10.087 1.00 0.79 ATOM 554 CB ILE 37 -2.695 39.655 9.375 1.00 0.79 ATOM 556 CG2 ILE 37 -2.333 38.502 8.411 1.00 0.79 ATOM 560 CG1 ILE 37 -3.807 39.201 10.345 1.00 0.79 ATOM 563 CD1 ILE 37 -3.442 38.074 11.312 1.00 0.79 ATOM 567 C ILE 37 -0.434 40.762 9.066 1.00 0.79 ATOM 568 O ILE 37 0.504 40.082 8.665 1.00 0.79 ATOM 569 N SER 38 -0.600 42.031 8.702 1.00 0.62 ATOM 571 CA SER 38 0.302 42.784 7.811 1.00 0.62 ATOM 573 CB SER 38 -0.322 44.136 7.482 1.00 0.62 ATOM 576 OG SER 38 -1.604 43.905 6.927 1.00 0.62 ATOM 578 C SER 38 1.683 42.996 8.430 1.00 0.62 ATOM 579 O SER 38 2.687 43.000 7.728 1.00 0.62 ATOM 580 N SER 39 1.731 43.157 9.754 1.00 0.59 ATOM 582 CA SER 39 2.937 43.466 10.536 1.00 0.59 ATOM 584 CB SER 39 2.547 44.452 11.620 1.00 0.59 ATOM 587 OG SER 39 1.504 43.876 12.376 1.00 0.59 ATOM 589 C SER 39 3.615 42.245 11.155 1.00 0.59 ATOM 590 O SER 39 4.759 42.325 11.576 1.00 0.59 ATOM 591 N PHE 40 2.946 41.081 11.184 1.00 0.64 ATOM 593 CA PHE 40 3.472 39.832 11.774 1.00 0.64 ATOM 595 CB PHE 40 2.421 38.718 11.535 1.00 0.64 ATOM 598 CG PHE 40 2.646 37.365 12.193 1.00 0.64 ATOM 599 CD1 PHE 40 3.594 37.141 13.223 1.00 0.64 ATOM 601 CE1 PHE 40 3.768 35.854 13.772 1.00 0.64 ATOM 603 CZ PHE 40 2.992 34.784 13.321 1.00 0.64 ATOM 605 CE2 PHE 40 2.013 35.000 12.329 1.00 0.64 ATOM 607 CD2 PHE 40 1.841 36.286 11.790 1.00 0.64 ATOM 609 C PHE 40 4.846 39.448 11.237 1.00 0.64 ATOM 610 O PHE 40 5.709 39.076 12.014 1.00 0.64 ATOM 611 N ILE 41 5.124 39.694 9.957 1.00 0.70 ATOM 613 CA ILE 41 6.439 39.457 9.320 1.00 0.70 ATOM 615 CB ILE 41 6.306 39.796 7.821 1.00 0.70 ATOM 617 CG2 ILE 41 6.172 41.299 7.553 1.00 0.70 ATOM 621 CG1 ILE 41 7.441 39.224 6.958 1.00 0.70 ATOM 624 CD1 ILE 41 7.282 37.721 6.744 1.00 0.70 ATOM 628 C ILE 41 7.594 40.215 10.014 1.00 0.70 ATOM 629 O ILE 41 8.711 39.711 10.101 1.00 0.70 ATOM 630 N GLY 42 7.321 41.408 10.571 1.00 0.75 ATOM 632 CA GLY 42 8.280 42.199 11.346 1.00 0.75 ATOM 635 C GLY 42 8.482 41.685 12.787 1.00 0.75 ATOM 636 O GLY 42 9.585 41.823 13.327 1.00 0.75 ATOM 637 N ARG 43 7.467 41.032 13.371 1.00 0.80 ATOM 639 CA ARG 43 7.549 40.402 14.702 1.00 0.80 ATOM 641 CB ARG 43 6.149 40.294 15.350 1.00 0.80 ATOM 644 CG ARG 43 5.526 41.649 15.688 1.00 0.80 ATOM 647 CD ARG 43 4.272 41.495 16.572 1.00 0.80 ATOM 650 NE ARG 43 3.215 40.670 15.932 1.00 0.80 ATOM 652 CZ ARG 43 2.405 41.049 14.963 1.00 0.80 ATOM 653 NH1 ARG 43 2.458 42.238 14.448 1.00 0.80 ATOM 656 NH2 ARG 43 1.539 40.208 14.459 1.00 0.80 ATOM 659 C ARG 43 8.198 39.015 14.657 1.00 0.80 ATOM 660 O ARG 43 8.984 38.676 15.536 1.00 0.80 ATOM 661 N SER 44 7.877 38.209 13.635 1.00 0.80 ATOM 663 CA SER 44 8.343 36.822 13.480 1.00 0.80 ATOM 665 CB SER 44 7.361 36.068 12.582 1.00 0.80 ATOM 668 OG SER 44 7.344 36.674 11.302 1.00 0.80 ATOM 670 C SER 44 9.748 36.726 12.881 1.00 0.80 ATOM 671 O SER 44 10.518 35.832 13.241 1.00 0.80 ATOM 672 N LYS 45 10.086 37.667 11.982 1.00 0.81 ATOM 674 CA LYS 45 11.356 37.741 11.235 1.00 0.81 ATOM 676 CB LYS 45 12.507 38.263 12.132 1.00 0.81 ATOM 679 CG LYS 45 12.258 39.690 12.639 1.00 0.81 ATOM 682 CD LYS 45 13.507 40.204 13.360 1.00 0.81 ATOM 685 CE LYS 45 13.309 41.665 13.745 1.00 0.81 ATOM 688 NZ LYS 45 14.532 42.233 14.410 1.00 0.81 ATOM 692 C LYS 45 11.737 36.459 10.491 1.00 0.81 ATOM 693 O LYS 45 12.899 36.065 10.485 1.00 0.81 TER END