####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS089_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS089_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 36 8 - 43 4.93 6.89 LCS_AVERAGE: 76.29 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 20 - 35 1.94 8.53 LCS_AVERAGE: 25.72 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 20 - 31 0.55 7.63 LCS_AVERAGE: 16.37 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 4 8 13 3 3 5 6 13 14 16 22 26 27 29 30 32 33 34 36 39 39 40 41 LCS_GDT V 3 V 3 4 8 24 3 5 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT Q 4 Q 4 4 8 24 3 11 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT G 5 G 5 4 8 24 0 4 5 7 9 13 14 17 25 27 29 30 34 35 35 36 39 39 40 41 LCS_GDT P 6 P 6 3 8 24 3 3 5 8 9 11 14 23 25 27 29 30 34 35 35 36 39 39 40 41 LCS_GDT W 7 W 7 3 8 24 3 3 6 7 9 11 13 14 25 26 29 30 31 33 34 36 39 39 40 41 LCS_GDT V 8 V 8 3 11 36 3 3 6 7 9 16 21 23 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT G 9 G 9 9 11 36 8 9 11 12 14 16 21 23 26 26 29 31 34 35 35 36 39 39 40 41 LCS_GDT S 10 S 10 9 11 36 8 9 9 10 11 11 14 16 21 24 27 31 34 35 35 36 39 39 40 41 LCS_GDT S 11 S 11 9 11 36 8 9 9 10 11 12 16 19 23 25 27 31 34 35 35 36 39 39 40 41 LCS_GDT Y 12 Y 12 9 11 36 8 9 9 10 11 11 16 19 23 26 28 31 34 35 35 36 39 39 40 41 LCS_GDT V 13 V 13 9 11 36 8 9 9 10 11 12 16 19 23 26 28 31 34 35 35 36 39 39 40 41 LCS_GDT A 14 A 14 9 11 36 8 9 9 10 11 11 14 19 21 23 26 28 32 33 35 36 38 39 40 41 LCS_GDT E 15 E 15 9 11 36 8 9 9 10 11 11 14 19 21 22 23 28 31 33 34 36 38 39 40 41 LCS_GDT T 16 T 16 9 11 36 8 9 9 10 11 11 14 19 21 22 26 29 34 35 35 36 39 39 40 41 LCS_GDT G 17 G 17 9 11 36 3 9 9 10 11 11 14 19 21 23 27 30 34 35 35 36 39 39 40 41 LCS_GDT Q 18 Q 18 4 11 36 3 4 5 9 11 11 14 19 21 24 28 31 34 35 35 36 39 39 40 41 LCS_GDT N 19 N 19 3 13 36 3 4 4 4 6 11 17 19 24 26 29 31 34 35 35 36 39 39 40 41 LCS_GDT W 20 W 20 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 33 35 35 36 39 39 40 41 LCS_GDT A 21 A 21 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT S 22 S 22 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT L 23 L 23 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT A 24 A 24 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT A 25 A 25 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT N 26 N 26 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT E 27 E 27 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT L 28 L 28 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT R 29 R 29 12 16 36 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT V 30 V 30 12 16 36 6 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT T 31 T 31 12 16 36 5 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT E 32 E 32 3 16 36 3 3 3 6 7 17 20 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT R 33 R 33 3 16 36 3 3 3 12 16 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT P 34 P 34 3 16 36 3 3 3 6 11 13 20 24 24 27 29 30 31 33 34 36 39 39 40 41 LCS_GDT F 35 F 35 3 16 36 3 4 4 13 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT W 36 W 36 6 7 36 4 4 6 7 8 15 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT I 37 I 37 6 7 36 4 5 6 8 9 18 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT S 38 S 38 6 7 36 4 5 10 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT S 39 S 39 6 7 36 4 5 6 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT F 40 F 40 6 7 36 4 5 6 13 16 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT I 41 I 41 6 7 36 4 7 13 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 LCS_GDT G 42 G 42 3 7 36 3 4 5 6 8 11 17 19 23 25 27 29 32 34 35 36 39 39 40 41 LCS_GDT R 43 R 43 3 4 36 3 3 4 6 7 8 11 16 20 21 25 28 32 33 34 35 38 38 39 41 LCS_GDT S 44 S 44 3 4 34 3 3 3 6 7 8 9 11 12 13 14 17 22 24 27 31 32 36 38 38 LCS_GDT K 45 K 45 3 3 14 3 3 3 6 7 8 9 11 12 13 14 15 15 16 17 17 17 17 19 19 LCS_AVERAGE LCS_A: 39.46 ( 16.37 25.72 76.29 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 10 12 14 14 18 20 22 24 26 27 29 31 34 35 35 36 39 39 40 41 GDT PERCENT_AT 22.73 27.27 31.82 31.82 40.91 45.45 50.00 54.55 59.09 61.36 65.91 70.45 77.27 79.55 79.55 81.82 88.64 88.64 90.91 93.18 GDT RMS_LOCAL 0.34 0.55 0.84 0.84 1.45 1.65 1.96 2.32 2.55 2.73 3.03 3.94 4.61 4.64 4.64 4.61 5.10 5.10 5.33 5.54 GDT RMS_ALL_AT 7.67 7.63 8.09 8.09 8.01 8.06 8.05 8.26 8.05 8.45 8.34 6.92 7.07 7.06 7.06 7.12 7.04 7.04 6.97 6.94 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 15 E 15 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.370 0 0.608 0.597 7.782 1.818 1.455 - LGA V 3 V 3 1.865 0 0.117 0.186 2.995 45.455 44.675 2.626 LGA Q 4 Q 4 1.198 0 0.681 0.761 2.100 55.000 59.192 1.456 LGA G 5 G 5 5.921 0 0.080 0.080 6.992 0.455 0.455 - LGA P 6 P 6 6.024 0 0.021 0.072 7.827 0.000 0.000 7.827 LGA W 7 W 7 6.840 0 0.436 0.391 12.891 0.000 0.000 12.643 LGA V 8 V 8 4.771 0 0.209 0.941 6.078 1.818 1.039 5.121 LGA G 9 G 9 5.047 0 0.534 0.534 7.060 2.727 2.727 - LGA S 10 S 10 11.590 0 0.033 0.588 14.206 0.000 0.000 14.206 LGA S 11 S 11 11.835 0 0.167 0.186 13.310 0.000 0.000 12.557 LGA Y 12 Y 12 8.777 0 0.031 1.217 10.177 0.000 0.000 9.564 LGA V 13 V 13 10.280 0 0.028 0.080 13.472 0.000 0.000 12.904 LGA A 14 A 14 16.957 0 0.014 0.028 18.919 0.000 0.000 - LGA E 15 E 15 17.390 0 0.046 1.242 19.748 0.000 0.000 19.308 LGA T 16 T 16 13.849 0 0.058 1.159 14.594 0.000 0.000 9.380 LGA G 17 G 17 14.991 0 0.682 0.682 14.991 0.000 0.000 - LGA Q 18 Q 18 11.631 0 0.642 1.439 14.233 0.000 0.000 14.132 LGA N 19 N 19 8.087 0 0.086 1.089 11.785 0.000 0.000 11.619 LGA W 20 W 20 1.045 0 0.615 1.267 9.862 51.818 17.143 9.862 LGA A 21 A 21 1.919 0 0.067 0.064 2.593 58.182 52.000 - LGA S 22 S 22 1.095 0 0.021 0.621 2.368 73.636 66.364 2.368 LGA L 23 L 23 0.382 0 0.055 1.479 5.364 100.000 61.818 3.515 LGA A 24 A 24 1.126 0 0.023 0.037 1.549 73.636 69.091 - LGA A 25 A 25 0.909 0 0.029 0.031 1.124 81.818 78.545 - LGA N 26 N 26 0.165 0 0.020 0.991 3.756 100.000 70.909 3.472 LGA E 27 E 27 0.616 0 0.067 1.097 6.643 86.364 51.313 6.643 LGA L 28 L 28 0.809 0 0.128 1.410 4.926 90.909 62.045 2.146 LGA R 29 R 29 0.345 0 0.068 1.012 2.321 90.909 72.727 2.321 LGA V 30 V 30 0.891 0 0.153 0.212 1.884 81.818 72.727 1.884 LGA T 31 T 31 0.231 0 0.457 0.443 2.027 86.818 69.870 2.027 LGA E 32 E 32 4.336 0 0.413 1.311 10.363 25.000 11.111 10.363 LGA R 33 R 33 2.851 0 0.044 1.269 12.850 11.364 4.628 12.850 LGA P 34 P 34 4.602 0 0.648 0.644 5.896 2.273 1.558 5.629 LGA F 35 F 35 2.560 0 0.580 0.855 11.480 27.273 10.413 11.480 LGA W 36 W 36 4.042 0 0.584 0.519 12.111 25.000 7.143 12.111 LGA I 37 I 37 3.340 0 0.102 0.898 6.385 33.182 17.273 6.385 LGA S 38 S 38 2.736 0 0.150 0.632 3.947 32.727 25.455 3.739 LGA S 39 S 39 2.783 0 0.183 0.707 4.829 28.182 22.121 4.829 LGA F 40 F 40 2.687 0 0.029 0.801 9.715 32.727 13.719 9.129 LGA I 41 I 41 3.041 0 0.587 1.014 5.773 17.727 10.227 5.372 LGA G 42 G 42 8.643 0 0.174 0.174 12.104 0.000 0.000 - LGA R 43 R 43 12.807 0 0.377 0.992 21.263 0.000 0.000 21.263 LGA S 44 S 44 17.025 0 0.342 0.639 19.028 0.000 0.000 18.975 LGA K 45 K 45 22.023 0 0.571 1.130 29.072 0.000 0.000 29.072 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 6.730 6.657 8.302 29.969 22.221 9.662 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 2.32 48.864 44.997 0.992 LGA_LOCAL RMSD: 2.319 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 8.260 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 6.730 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.216060 * X + 0.249074 * Y + -0.944076 * Z + 19.738077 Y_new = 0.750063 * X + -0.661360 * Y + -0.002827 * Z + 32.535240 Z_new = -0.625079 * X + -0.707506 * Y + -0.329715 * Z + 92.733894 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: 1.290333 0.675233 -2.006896 [DEG: 73.9306 38.6880 -114.9867 ] ZXZ: -1.567802 1.906798 -2.417971 [DEG: -89.8284 109.2515 -138.5395 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS089_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS089_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 2.32 44.997 6.73 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS089_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 9 N ALA 2 7.541 41.822 12.555 1.00 9.91 ATOM 10 CA ALA 2 7.856 40.907 13.608 1.00 9.91 ATOM 11 CB ALA 2 6.720 40.776 14.636 1.00 9.91 ATOM 12 C ALA 2 8.112 39.541 13.050 1.00 9.91 ATOM 13 O ALA 2 9.030 38.861 13.506 1.00 9.91 ATOM 14 N VAL 3 7.319 39.076 12.062 1.00 9.88 ATOM 15 CA VAL 3 7.581 37.743 11.593 1.00 9.88 ATOM 16 CB VAL 3 6.387 36.843 11.721 1.00 9.88 ATOM 17 CG1 VAL 3 6.757 35.448 11.195 1.00 9.88 ATOM 18 CG2 VAL 3 5.928 36.851 13.186 1.00 9.88 ATOM 19 C VAL 3 7.947 37.784 10.140 1.00 9.88 ATOM 20 O VAL 3 7.106 37.999 9.277 1.00 9.88 ATOM 21 N GLN 4 9.227 37.529 9.839 1.00 9.23 ATOM 22 CA GLN 4 9.822 37.516 8.529 1.00 9.23 ATOM 23 CB GLN 4 11.355 37.483 8.593 1.00 9.23 ATOM 24 CG GLN 4 11.909 36.209 9.226 1.00 9.23 ATOM 25 CD GLN 4 13.399 36.417 9.420 1.00 9.23 ATOM 26 OE1 GLN 4 14.216 35.592 9.013 1.00 9.23 ATOM 27 NE2 GLN 4 13.761 37.557 10.068 1.00 9.23 ATOM 28 C GLN 4 9.370 36.322 7.734 1.00 9.23 ATOM 29 O GLN 4 9.553 36.288 6.518 1.00 9.23 ATOM 30 N GLY 5 8.885 35.253 8.395 1.00 8.97 ATOM 31 CA GLY 5 8.468 34.096 7.643 1.00 8.97 ATOM 32 C GLY 5 7.234 34.455 6.866 1.00 8.97 ATOM 33 O GLY 5 6.408 35.239 7.319 1.00 8.97 ATOM 34 N PRO 6 7.075 33.844 5.720 1.00 8.68 ATOM 35 CA PRO 6 6.022 34.115 4.767 1.00 8.68 ATOM 36 CD PRO 6 7.866 32.681 5.357 1.00 8.68 ATOM 37 CB PRO 6 6.350 33.246 3.554 1.00 8.68 ATOM 38 CG PRO 6 7.134 32.068 4.153 1.00 8.68 ATOM 39 C PRO 6 4.636 33.815 5.271 1.00 8.68 ATOM 40 O PRO 6 3.675 34.217 4.617 1.00 8.68 ATOM 41 N TRP 7 4.506 33.180 6.447 1.00 8.15 ATOM 42 CA TRP 7 3.286 32.579 6.923 1.00 8.15 ATOM 43 CB TRP 7 3.444 31.991 8.332 1.00 8.15 ATOM 44 CG TRP 7 4.364 30.798 8.381 1.00 8.15 ATOM 45 CD2 TRP 7 3.968 29.477 7.985 1.00 8.15 ATOM 46 CD1 TRP 7 5.670 30.714 8.762 1.00 8.15 ATOM 47 NE1 TRP 7 6.114 29.419 8.631 1.00 8.15 ATOM 48 CE2 TRP 7 5.076 28.647 8.153 1.00 8.15 ATOM 49 CE3 TRP 7 2.779 28.997 7.519 1.00 8.15 ATOM 50 CZ2 TRP 7 5.010 27.317 7.854 1.00 8.15 ATOM 51 CZ3 TRP 7 2.716 27.654 7.218 1.00 8.15 ATOM 52 CH2 TRP 7 3.810 26.831 7.384 1.00 8.15 ATOM 53 C TRP 7 2.105 33.509 6.965 1.00 8.15 ATOM 54 O TRP 7 0.976 33.044 6.838 1.00 8.15 ATOM 55 N VAL 8 2.294 34.783 7.338 1.00 8.48 ATOM 56 CA VAL 8 1.258 35.785 7.382 1.00 8.48 ATOM 57 CB VAL 8 1.058 36.424 8.709 1.00 8.48 ATOM 58 CG1 VAL 8 0.043 35.523 9.397 1.00 8.48 ATOM 59 CG2 VAL 8 2.332 36.407 9.560 1.00 8.48 ATOM 60 C VAL 8 1.029 36.734 6.222 1.00 8.48 ATOM 61 O VAL 8 0.219 37.651 6.367 1.00 8.48 ATOM 62 N GLY 9 1.786 36.665 5.108 1.00 8.67 ATOM 63 CA GLY 9 1.581 37.619 4.035 1.00 8.67 ATOM 64 C GLY 9 0.156 37.553 3.551 1.00 8.67 ATOM 65 O GLY 9 -0.478 36.503 3.598 1.00 8.67 ATOM 66 N SER 10 -0.366 38.676 2.997 1.00 7.71 ATOM 67 CA SER 10 -1.765 38.756 2.650 1.00 7.71 ATOM 68 CB SER 10 -2.178 40.098 2.030 1.00 7.71 ATOM 69 OG SER 10 -2.042 41.148 2.973 1.00 7.71 ATOM 70 C SER 10 -2.107 37.643 1.712 1.00 7.71 ATOM 71 O SER 10 -3.245 37.176 1.700 1.00 7.71 ATOM 72 N SER 11 -1.119 37.202 0.910 1.00 8.44 ATOM 73 CA SER 11 -1.210 36.048 0.069 1.00 8.44 ATOM 74 CB SER 11 0.177 35.634 -0.434 1.00 8.44 ATOM 75 OG SER 11 0.107 34.385 -1.102 1.00 8.44 ATOM 76 C SER 11 -1.651 34.887 0.909 1.00 8.44 ATOM 77 O SER 11 -2.792 34.441 0.849 1.00 8.44 ATOM 78 N TYR 12 -0.754 34.440 1.800 1.00 8.27 ATOM 79 CA TYR 12 -0.921 33.256 2.595 1.00 8.27 ATOM 80 CB TYR 12 0.258 33.022 3.557 1.00 8.27 ATOM 81 CG TYR 12 1.472 32.761 2.727 1.00 8.27 ATOM 82 CD1 TYR 12 2.230 33.800 2.234 1.00 8.27 ATOM 83 CD2 TYR 12 1.853 31.471 2.439 1.00 8.27 ATOM 84 CE1 TYR 12 3.347 33.556 1.467 1.00 8.27 ATOM 85 CE2 TYR 12 2.968 31.220 1.673 1.00 8.27 ATOM 86 CZ TYR 12 3.717 32.264 1.185 1.00 8.27 ATOM 87 OH TYR 12 4.861 32.007 0.399 1.00 8.27 ATOM 88 C TYR 12 -2.179 33.360 3.403 1.00 8.27 ATOM 89 O TYR 12 -2.859 32.359 3.624 1.00 8.27 ATOM 90 N VAL 13 -2.514 34.570 3.888 1.00 8.35 ATOM 91 CA VAL 13 -3.670 34.762 4.719 1.00 8.35 ATOM 92 CB VAL 13 -3.858 36.200 5.115 1.00 8.35 ATOM 93 CG1 VAL 13 -5.175 36.332 5.900 1.00 8.35 ATOM 94 CG2 VAL 13 -2.611 36.660 5.891 1.00 8.35 ATOM 95 C VAL 13 -4.915 34.339 3.994 1.00 8.35 ATOM 96 O VAL 13 -5.731 33.616 4.559 1.00 8.35 ATOM 97 N ALA 14 -5.124 34.807 2.744 1.00 7.96 ATOM 98 CA ALA 14 -6.295 34.432 1.996 1.00 7.96 ATOM 99 CB ALA 14 -6.480 35.262 0.715 1.00 7.96 ATOM 100 C ALA 14 -6.235 32.981 1.599 1.00 7.96 ATOM 101 O ALA 14 -7.232 32.263 1.673 1.00 7.96 ATOM 102 N GLU 15 -5.046 32.508 1.183 1.00 8.96 ATOM 103 CA GLU 15 -4.882 31.176 0.669 1.00 8.96 ATOM 104 CB GLU 15 -3.419 30.902 0.279 1.00 8.96 ATOM 105 CG GLU 15 -3.199 29.623 -0.529 1.00 8.96 ATOM 106 CD GLU 15 -1.724 29.571 -0.904 1.00 8.96 ATOM 107 OE1 GLU 15 -0.958 30.434 -0.399 1.00 8.96 ATOM 108 OE2 GLU 15 -1.343 28.672 -1.701 1.00 8.96 ATOM 109 C GLU 15 -5.297 30.187 1.714 1.00 8.96 ATOM 110 O GLU 15 -5.924 29.173 1.409 1.00 8.96 ATOM 111 N THR 16 -4.879 30.448 2.964 1.00 8.27 ATOM 112 CA THR 16 -5.154 29.692 4.155 1.00 8.27 ATOM 113 CB THR 16 -4.160 29.987 5.227 1.00 8.27 ATOM 114 OG1 THR 16 -4.302 29.050 6.280 1.00 8.27 ATOM 115 CG2 THR 16 -4.402 31.419 5.736 1.00 8.27 ATOM 116 C THR 16 -6.530 29.959 4.713 1.00 8.27 ATOM 117 O THR 16 -7.097 29.104 5.390 1.00 8.27 ATOM 118 N GLY 17 -7.089 31.173 4.519 1.00 6.95 ATOM 119 CA GLY 17 -8.397 31.440 5.056 1.00 6.95 ATOM 120 C GLY 17 -8.284 32.276 6.303 1.00 6.95 ATOM 121 O GLY 17 -7.227 32.376 6.926 1.00 6.95 ATOM 122 N GLN 18 -9.426 32.876 6.703 1.00 7.44 ATOM 123 CA GLN 18 -9.546 33.790 7.806 1.00 7.44 ATOM 124 CB GLN 18 -10.952 34.412 7.912 1.00 7.44 ATOM 125 CG GLN 18 -11.067 35.476 9.005 1.00 7.44 ATOM 126 CD GLN 18 -10.252 36.686 8.572 1.00 7.44 ATOM 127 OE1 GLN 18 -10.351 37.144 7.434 1.00 7.44 ATOM 128 NE2 GLN 18 -9.415 37.216 9.502 1.00 7.44 ATOM 129 C GLN 18 -9.238 33.099 9.097 1.00 7.44 ATOM 130 O GLN 18 -8.742 33.726 10.032 1.00 7.44 ATOM 131 N ASN 19 -9.553 31.796 9.205 1.00 7.02 ATOM 132 CA ASN 19 -9.293 31.099 10.431 1.00 7.02 ATOM 133 CB ASN 19 -9.685 29.613 10.367 1.00 7.02 ATOM 134 CG ASN 19 -11.204 29.537 10.305 1.00 7.02 ATOM 135 OD1 ASN 19 -11.901 30.192 11.077 1.00 7.02 ATOM 136 ND2 ASN 19 -11.734 28.724 9.352 1.00 7.02 ATOM 137 C ASN 19 -7.822 31.169 10.698 1.00 7.02 ATOM 138 O ASN 19 -7.402 31.419 11.827 1.00 7.02 ATOM 139 N TRP 20 -6.997 30.952 9.655 1.00 6.88 ATOM 140 CA TRP 20 -5.570 31.009 9.802 1.00 6.88 ATOM 141 CB TRP 20 -4.798 30.567 8.554 1.00 6.88 ATOM 142 CG TRP 20 -3.298 30.632 8.721 1.00 6.88 ATOM 143 CD2 TRP 20 -2.518 29.634 9.396 1.00 6.88 ATOM 144 CD1 TRP 20 -2.424 31.596 8.313 1.00 6.88 ATOM 145 NE1 TRP 20 -1.145 31.258 8.683 1.00 6.88 ATOM 146 CE2 TRP 20 -1.187 30.054 9.354 1.00 6.88 ATOM 147 CE3 TRP 20 -2.878 28.465 10.003 1.00 6.88 ATOM 148 CZ2 TRP 20 -0.194 29.307 9.919 1.00 6.88 ATOM 149 CZ3 TRP 20 -1.875 27.714 10.571 1.00 6.88 ATOM 150 CH2 TRP 20 -0.558 28.127 10.529 1.00 6.88 ATOM 151 C TRP 20 -5.164 32.415 10.107 1.00 6.88 ATOM 152 O TRP 20 -4.227 32.648 10.869 1.00 6.88 ATOM 153 N ALA 21 -5.856 33.401 9.508 1.00 6.87 ATOM 154 CA ALA 21 -5.481 34.768 9.727 1.00 6.87 ATOM 155 CB ALA 21 -6.407 35.757 9.000 1.00 6.87 ATOM 156 C ALA 21 -5.568 35.066 11.198 1.00 6.87 ATOM 157 O ALA 21 -4.669 35.691 11.759 1.00 6.87 ATOM 158 N SER 22 -6.648 34.614 11.865 1.00 6.86 ATOM 159 CA SER 22 -6.841 34.881 13.265 1.00 6.86 ATOM 160 CB SER 22 -8.234 34.457 13.761 1.00 6.86 ATOM 161 OG SER 22 -9.233 35.222 13.100 1.00 6.86 ATOM 162 C SER 22 -5.816 34.150 14.080 1.00 6.86 ATOM 163 O SER 22 -5.288 34.701 15.046 1.00 6.86 ATOM 164 N LEU 23 -5.489 32.896 13.709 1.00 7.21 ATOM 165 CA LEU 23 -4.558 32.124 14.486 1.00 7.21 ATOM 166 CB LEU 23 -4.317 30.715 13.918 1.00 7.21 ATOM 167 CG LEU 23 -3.258 29.918 14.705 1.00 7.21 ATOM 168 CD1 LEU 23 -3.694 29.687 16.161 1.00 7.21 ATOM 169 CD2 LEU 23 -2.884 28.615 13.981 1.00 7.21 ATOM 170 C LEU 23 -3.237 32.822 14.488 1.00 7.21 ATOM 171 O LEU 23 -2.556 32.898 15.509 1.00 7.21 ATOM 172 N ALA 24 -2.836 33.337 13.318 1.00 7.86 ATOM 173 CA ALA 24 -1.584 34.009 13.154 1.00 7.86 ATOM 174 CB ALA 24 -1.341 34.376 11.696 1.00 7.86 ATOM 175 C ALA 24 -1.544 35.278 13.952 1.00 7.86 ATOM 176 O ALA 24 -0.504 35.635 14.501 1.00 7.86 ATOM 177 N ALA 25 -2.663 36.023 14.000 1.00 7.62 ATOM 178 CA ALA 25 -2.683 37.262 14.725 1.00 7.62 ATOM 179 CB ALA 25 -4.034 37.992 14.612 1.00 7.62 ATOM 180 C ALA 25 -2.440 37.001 16.180 1.00 7.62 ATOM 181 O ALA 25 -1.625 37.676 16.807 1.00 7.62 ATOM 182 N ASN 26 -3.117 35.991 16.761 1.00 8.01 ATOM 183 CA ASN 26 -2.953 35.762 18.168 1.00 8.01 ATOM 184 CB ASN 26 -3.977 34.787 18.792 1.00 8.01 ATOM 185 CG ASN 26 -3.958 33.444 18.087 1.00 8.01 ATOM 186 OD1 ASN 26 -4.553 33.285 17.022 1.00 8.01 ATOM 187 ND2 ASN 26 -3.279 32.441 18.705 1.00 8.01 ATOM 188 C ASN 26 -1.550 35.324 18.471 1.00 8.01 ATOM 189 O ASN 26 -0.978 35.733 19.480 1.00 8.01 ATOM 190 N GLU 27 -0.947 34.491 17.603 1.00 8.15 ATOM 191 CA GLU 27 0.391 34.026 17.838 1.00 8.15 ATOM 192 CB GLU 27 0.807 32.916 16.851 1.00 8.15 ATOM 193 CG GLU 27 0.618 33.260 15.373 1.00 8.15 ATOM 194 CD GLU 27 0.686 31.951 14.594 1.00 8.15 ATOM 195 OE1 GLU 27 0.703 30.874 15.248 1.00 8.15 ATOM 196 OE2 GLU 27 0.715 32.012 13.337 1.00 8.15 ATOM 197 C GLU 27 1.341 35.185 17.775 1.00 8.15 ATOM 198 O GLU 27 2.311 35.256 18.527 1.00 8.15 ATOM 199 N LEU 28 1.064 36.128 16.864 1.00 8.24 ATOM 200 CA LEU 28 1.823 37.320 16.651 1.00 8.24 ATOM 201 CB LEU 28 1.341 38.041 15.383 1.00 8.24 ATOM 202 CG LEU 28 2.323 39.096 14.869 1.00 8.24 ATOM 203 CD1 LEU 28 3.659 38.433 14.512 1.00 8.24 ATOM 204 CD2 LEU 28 1.735 39.870 13.681 1.00 8.24 ATOM 205 C LEU 28 1.639 38.212 17.848 1.00 8.24 ATOM 206 O LEU 28 2.423 39.132 18.072 1.00 8.24 ATOM 207 N ARG 29 0.553 37.978 18.617 1.00 8.20 ATOM 208 CA ARG 29 0.150 38.760 19.759 1.00 8.20 ATOM 209 CB ARG 29 1.080 38.700 20.995 1.00 8.20 ATOM 210 CG ARG 29 2.541 39.105 20.809 1.00 8.20 ATOM 211 CD ARG 29 3.327 39.070 22.123 1.00 8.20 ATOM 212 NE ARG 29 4.768 39.274 21.811 1.00 8.20 ATOM 213 CZ ARG 29 5.666 38.280 22.073 1.00 8.20 ATOM 214 NH1 ARG 29 5.243 37.108 22.630 1.00 8.20 ATOM 215 NH2 ARG 29 6.988 38.460 21.787 1.00 8.20 ATOM 216 C ARG 29 -0.114 40.164 19.321 1.00 8.20 ATOM 217 O ARG 29 0.221 41.128 20.007 1.00 8.20 ATOM 218 N VAL 30 -0.752 40.287 18.137 1.00 7.30 ATOM 219 CA VAL 30 -1.199 41.535 17.581 1.00 7.30 ATOM 220 CB VAL 30 -0.726 41.757 16.172 1.00 7.30 ATOM 221 CG1 VAL 30 -1.267 43.103 15.664 1.00 7.30 ATOM 222 CG2 VAL 30 0.809 41.670 16.167 1.00 7.30 ATOM 223 C VAL 30 -2.700 41.435 17.584 1.00 7.30 ATOM 224 O VAL 30 -3.246 40.349 17.390 1.00 7.30 ATOM 225 N THR 31 -3.409 42.573 17.748 1.00 7.36 ATOM 226 CA THR 31 -4.810 42.522 18.082 1.00 7.36 ATOM 227 CB THR 31 -5.283 43.762 18.783 1.00 7.36 ATOM 228 OG1 THR 31 -5.138 44.890 17.932 1.00 7.36 ATOM 229 CG2 THR 31 -4.449 43.950 20.061 1.00 7.36 ATOM 230 C THR 31 -5.755 42.280 16.940 1.00 7.36 ATOM 231 O THR 31 -6.369 43.205 16.411 1.00 7.36 ATOM 232 N GLU 32 -5.894 40.992 16.569 1.00 7.92 ATOM 233 CA GLU 32 -6.883 40.445 15.679 1.00 7.92 ATOM 234 CB GLU 32 -8.190 40.052 16.388 1.00 7.92 ATOM 235 CG GLU 32 -7.995 38.917 17.399 1.00 7.92 ATOM 236 CD GLU 32 -7.419 37.714 16.664 1.00 7.92 ATOM 237 OE1 GLU 32 -8.005 37.316 15.622 1.00 7.92 ATOM 238 OE2 GLU 32 -6.381 37.178 17.136 1.00 7.92 ATOM 239 C GLU 32 -7.198 41.344 14.523 1.00 7.92 ATOM 240 O GLU 32 -8.365 41.658 14.292 1.00 7.92 ATOM 241 N ARG 33 -6.181 41.770 13.749 1.00 8.46 ATOM 242 CA ARG 33 -6.464 42.589 12.603 1.00 8.46 ATOM 243 CB ARG 33 -6.129 44.067 12.851 1.00 8.46 ATOM 244 CG ARG 33 -6.416 44.981 11.664 1.00 8.46 ATOM 245 CD ARG 33 -6.124 46.450 11.962 1.00 8.46 ATOM 246 NE ARG 33 -6.429 47.218 10.726 1.00 8.46 ATOM 247 CZ ARG 33 -7.182 48.351 10.805 1.00 8.46 ATOM 248 NH1 ARG 33 -7.684 48.745 12.012 1.00 8.46 ATOM 249 NH2 ARG 33 -7.435 49.081 9.681 1.00 8.46 ATOM 250 C ARG 33 -5.590 42.098 11.478 1.00 8.46 ATOM 251 O ARG 33 -4.366 42.134 11.582 1.00 8.46 ATOM 252 N PRO 34 -6.174 41.674 10.385 1.00 7.95 ATOM 253 CA PRO 34 -5.400 41.150 9.287 1.00 7.95 ATOM 254 CD PRO 34 -7.507 41.097 10.429 1.00 7.95 ATOM 255 CB PRO 34 -6.414 40.539 8.322 1.00 7.95 ATOM 256 CG PRO 34 -7.566 40.108 9.249 1.00 7.95 ATOM 257 C PRO 34 -4.477 42.156 8.672 1.00 7.95 ATOM 258 O PRO 34 -3.496 41.757 8.045 1.00 7.95 ATOM 259 N PHE 35 -4.785 43.456 8.809 1.00 8.16 ATOM 260 CA PHE 35 -3.951 44.509 8.301 1.00 8.16 ATOM 261 CB PHE 35 -4.612 45.884 8.512 1.00 8.16 ATOM 262 CG PHE 35 -3.625 46.971 8.269 1.00 8.16 ATOM 263 CD1 PHE 35 -3.300 47.374 6.995 1.00 8.16 ATOM 264 CD2 PHE 35 -3.040 47.602 9.342 1.00 8.16 ATOM 265 CE1 PHE 35 -2.390 48.387 6.799 1.00 8.16 ATOM 266 CE2 PHE 35 -2.131 48.614 9.151 1.00 8.16 ATOM 267 CZ PHE 35 -1.803 49.007 7.878 1.00 8.16 ATOM 268 C PHE 35 -2.644 44.485 9.039 1.00 8.16 ATOM 269 O PHE 35 -1.574 44.586 8.439 1.00 8.16 ATOM 270 N TRP 36 -2.698 44.335 10.376 1.00 7.52 ATOM 271 CA TRP 36 -1.503 44.361 11.168 1.00 7.52 ATOM 272 CB TRP 36 -1.786 44.287 12.678 1.00 7.52 ATOM 273 CG TRP 36 -2.440 45.543 13.200 1.00 7.52 ATOM 274 CD2 TRP 36 -1.745 46.791 13.333 1.00 7.52 ATOM 275 CD1 TRP 36 -3.731 45.776 13.580 1.00 7.52 ATOM 276 NE1 TRP 36 -3.882 47.093 13.942 1.00 7.52 ATOM 277 CE2 TRP 36 -2.668 47.731 13.793 1.00 7.52 ATOM 278 CE3 TRP 36 -0.443 47.124 13.085 1.00 7.52 ATOM 279 CZ2 TRP 36 -2.300 49.026 14.013 1.00 7.52 ATOM 280 CZ3 TRP 36 -0.073 48.430 13.312 1.00 7.52 ATOM 281 CH2 TRP 36 -0.985 49.361 13.766 1.00 7.52 ATOM 282 C TRP 36 -0.624 43.215 10.780 1.00 7.52 ATOM 283 O TRP 36 0.563 43.392 10.521 1.00 7.52 ATOM 284 N ILE 37 -1.202 42.009 10.676 1.00 7.33 ATOM 285 CA ILE 37 -0.450 40.822 10.407 1.00 7.33 ATOM 286 CB ILE 37 -1.359 39.633 10.442 1.00 7.33 ATOM 287 CG1 ILE 37 -2.053 39.534 11.810 1.00 7.33 ATOM 288 CG2 ILE 37 -0.520 38.400 10.156 1.00 7.33 ATOM 289 CD1 ILE 37 -1.074 39.317 12.965 1.00 7.33 ATOM 290 C ILE 37 0.221 40.926 9.064 1.00 7.33 ATOM 291 O ILE 37 1.395 40.581 8.920 1.00 7.33 ATOM 292 N SER 38 -0.496 41.422 8.039 1.00 8.42 ATOM 293 CA SER 38 0.091 41.521 6.730 1.00 8.42 ATOM 294 CB SER 38 -0.833 42.134 5.678 1.00 8.42 ATOM 295 OG SER 38 -0.134 42.171 4.444 1.00 8.42 ATOM 296 C SER 38 1.303 42.402 6.798 1.00 8.42 ATOM 297 O SER 38 2.361 42.041 6.282 1.00 8.42 ATOM 298 N SER 39 1.188 43.570 7.462 1.00 7.42 ATOM 299 CA SER 39 2.273 44.513 7.532 1.00 7.42 ATOM 300 CB SER 39 1.925 45.762 8.362 1.00 7.42 ATOM 301 OG SER 39 0.885 46.498 7.738 1.00 7.42 ATOM 302 C SER 39 3.458 43.868 8.194 1.00 7.42 ATOM 303 O SER 39 4.589 44.011 7.729 1.00 7.42 ATOM 304 N PHE 40 3.225 43.101 9.277 1.00 7.51 ATOM 305 CA PHE 40 4.306 42.504 10.015 1.00 7.51 ATOM 306 CB PHE 40 3.893 41.787 11.318 1.00 7.51 ATOM 307 CG PHE 40 3.585 42.831 12.344 1.00 7.51 ATOM 308 CD1 PHE 40 4.603 43.463 13.023 1.00 7.51 ATOM 309 CD2 PHE 40 2.289 43.193 12.627 1.00 7.51 ATOM 310 CE1 PHE 40 4.329 44.428 13.966 1.00 7.51 ATOM 311 CE2 PHE 40 2.006 44.156 13.568 1.00 7.51 ATOM 312 CZ PHE 40 3.029 44.775 14.243 1.00 7.51 ATOM 313 C PHE 40 5.072 41.539 9.153 1.00 7.51 ATOM 314 O PHE 40 6.246 41.292 9.429 1.00 7.51 ATOM 315 N ILE 41 4.402 40.848 8.203 1.00 7.93 ATOM 316 CA ILE 41 5.091 39.993 7.262 1.00 7.93 ATOM 317 CB ILE 41 4.168 39.075 6.525 1.00 7.93 ATOM 318 CG1 ILE 41 3.611 38.061 7.506 1.00 7.93 ATOM 319 CG2 ILE 41 4.950 38.411 5.382 1.00 7.93 ATOM 320 CD1 ILE 41 4.739 37.252 8.133 1.00 7.93 ATOM 321 C ILE 41 5.824 40.774 6.198 1.00 7.93 ATOM 322 O ILE 41 6.982 40.485 5.902 1.00 7.93 ATOM 323 N GLY 42 5.139 41.748 5.553 1.00 8.21 ATOM 324 CA GLY 42 5.737 42.585 4.530 1.00 8.21 ATOM 325 C GLY 42 6.322 41.765 3.395 1.00 8.21 ATOM 326 O GLY 42 7.283 42.208 2.768 1.00 8.21 ATOM 327 N ARG 43 5.683 40.625 3.041 1.00 8.37 ATOM 328 CA ARG 43 6.156 39.550 2.183 1.00 8.37 ATOM 329 CB ARG 43 4.996 38.696 1.630 1.00 8.37 ATOM 330 CG ARG 43 5.430 37.539 0.722 1.00 8.37 ATOM 331 CD ARG 43 6.238 36.455 1.436 1.00 8.37 ATOM 332 NE ARG 43 6.557 35.406 0.427 1.00 8.37 ATOM 333 CZ ARG 43 7.551 34.501 0.663 1.00 8.37 ATOM 334 NH1 ARG 43 8.299 34.587 1.802 1.00 8.37 ATOM 335 NH2 ARG 43 7.806 33.518 -0.249 1.00 8.37 ATOM 336 C ARG 43 7.009 39.951 1.015 1.00 8.37 ATOM 337 O ARG 43 6.578 39.874 -0.134 1.00 8.37 ATOM 338 N SER 44 8.285 40.297 1.300 1.00 7.21 ATOM 339 CA SER 44 9.336 40.658 0.389 1.00 7.21 ATOM 340 CB SER 44 9.148 40.275 -1.102 1.00 7.21 ATOM 341 OG SER 44 8.178 41.063 -1.767 1.00 7.21 ATOM 342 C SER 44 9.634 42.119 0.607 1.00 7.21 ATOM 343 O SER 44 10.073 42.520 1.679 1.00 7.21 ATOM 344 N LYS 45 9.486 42.980 -0.404 1.00 6.20 ATOM 345 CA LYS 45 9.821 44.367 -0.177 1.00 6.20 ATOM 346 CB LYS 45 9.836 45.200 -1.470 1.00 6.20 ATOM 347 CG LYS 45 11.096 45.042 -2.319 1.00 6.20 ATOM 348 CD LYS 45 11.267 43.658 -2.942 1.00 6.20 ATOM 349 CE LYS 45 12.461 43.581 -3.894 1.00 6.20 ATOM 350 NZ LYS 45 13.676 44.081 -3.213 1.00 6.20 ATOM 351 C LYS 45 8.885 45.085 0.760 1.00 6.20 ATOM 352 O LYS 45 9.327 45.658 1.755 1.00 6.20 TER END