####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS089_2-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS089_2-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 31 6 - 36 4.96 14.23 LCS_AVERAGE: 62.24 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 14 19 - 32 1.79 16.69 LCS_AVERAGE: 22.26 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 13 20 - 32 0.86 16.90 LCS_AVERAGE: 17.46 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 8 29 3 3 6 6 9 10 12 16 17 20 23 25 27 29 32 33 34 35 36 36 LCS_GDT V 3 V 3 4 8 30 3 3 7 8 9 10 12 16 18 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT Q 4 Q 4 4 8 30 3 3 6 8 9 10 11 16 16 20 23 23 27 30 32 33 34 35 36 36 LCS_GDT G 5 G 5 5 8 30 3 4 7 8 9 10 12 17 18 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT P 6 P 6 5 8 31 3 4 7 8 9 10 13 17 18 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT W 7 W 7 5 8 31 3 4 7 8 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT V 8 V 8 5 8 31 3 4 7 8 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT G 9 G 9 9 10 31 5 8 8 9 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT S 10 S 10 9 10 31 5 8 8 9 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT S 11 S 11 9 10 31 5 8 8 9 9 11 13 14 16 19 23 26 30 31 32 33 34 35 36 36 LCS_GDT Y 12 Y 12 9 10 31 5 8 8 9 9 11 13 14 16 18 21 26 30 31 32 33 34 35 36 36 LCS_GDT V 13 V 13 9 10 31 5 8 8 9 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT A 14 A 14 9 10 31 5 8 8 9 9 11 13 14 16 20 24 26 30 31 32 33 34 35 36 36 LCS_GDT E 15 E 15 9 10 31 5 8 8 9 9 11 13 14 16 18 19 21 22 28 30 32 34 35 36 36 LCS_GDT T 16 T 16 9 10 31 5 8 8 9 9 11 13 14 16 18 21 26 30 31 32 33 34 35 36 36 LCS_GDT G 17 G 17 9 10 31 3 4 7 9 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT Q 18 Q 18 4 10 31 3 4 5 7 9 11 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT N 19 N 19 4 14 31 3 3 4 4 7 11 13 15 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT W 20 W 20 13 14 31 7 11 13 13 13 13 13 16 18 20 23 24 25 28 31 33 34 35 36 36 LCS_GDT A 21 A 21 13 14 31 7 11 13 13 13 13 13 16 18 20 23 26 30 31 32 33 34 35 36 36 LCS_GDT S 22 S 22 13 14 31 7 11 13 13 13 13 13 16 18 21 24 26 30 31 32 33 34 35 36 36 LCS_GDT L 23 L 23 13 14 31 7 11 13 13 13 13 13 16 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT A 24 A 24 13 14 31 7 11 13 13 13 13 13 16 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT A 25 A 25 13 14 31 7 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT N 26 N 26 13 14 31 7 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT E 27 E 27 13 14 31 5 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT L 28 L 28 13 14 31 7 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT R 29 R 29 13 14 31 7 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT V 30 V 30 13 14 31 3 9 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT T 31 T 31 13 14 31 4 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT E 32 E 32 13 14 31 1 9 13 13 13 13 13 15 18 21 24 26 30 31 32 33 34 35 36 36 LCS_GDT R 33 R 33 4 10 31 0 4 4 4 6 10 12 16 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT P 34 P 34 4 6 31 2 4 4 5 6 7 7 12 15 17 20 26 29 31 32 33 34 35 36 36 LCS_GDT F 35 F 35 4 6 31 3 4 4 5 7 10 11 14 17 21 24 26 30 31 32 33 34 35 36 36 LCS_GDT W 36 W 36 4 6 31 3 3 4 5 6 7 11 17 19 22 24 26 30 31 32 33 34 35 36 36 LCS_GDT I 37 I 37 4 6 21 3 3 4 5 6 7 7 9 9 10 10 15 19 23 25 29 33 35 36 36 LCS_GDT S 38 S 38 4 5 13 0 3 4 5 5 7 8 9 9 10 10 11 12 17 22 24 26 31 36 36 LCS_GDT S 39 S 39 3 4 13 0 3 3 4 5 7 8 9 9 10 10 11 12 13 13 13 13 13 22 24 LCS_GDT F 40 F 40 3 6 13 3 3 3 4 5 7 8 9 9 10 10 11 12 13 13 13 13 13 14 14 LCS_GDT I 41 I 41 3 6 13 3 3 3 5 5 7 8 9 9 10 10 11 12 13 13 13 13 13 14 14 LCS_GDT G 42 G 42 4 6 13 4 4 4 5 5 7 8 9 9 10 10 11 12 13 13 13 13 13 14 14 LCS_GDT R 43 R 43 4 6 13 4 4 4 5 5 7 8 9 9 10 10 11 12 13 13 13 13 13 14 14 LCS_GDT S 44 S 44 4 6 13 4 4 4 5 5 7 8 9 9 10 10 11 12 13 13 13 13 13 14 14 LCS_GDT K 45 K 45 4 6 13 4 4 4 5 5 7 8 9 9 10 10 11 12 13 13 13 13 13 14 14 LCS_AVERAGE LCS_A: 33.99 ( 17.46 22.26 62.24 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 11 13 13 13 13 13 17 19 22 24 26 30 31 32 33 34 35 36 36 GDT PERCENT_AT 15.91 25.00 29.55 29.55 29.55 29.55 29.55 38.64 43.18 50.00 54.55 59.09 68.18 70.45 72.73 75.00 77.27 79.55 81.82 81.82 GDT RMS_LOCAL 0.26 0.61 0.86 0.86 0.86 0.86 0.86 2.98 3.39 3.59 3.80 4.07 4.62 4.71 4.85 4.96 5.12 5.28 5.47 5.47 GDT RMS_ALL_AT 15.39 16.42 16.90 16.90 16.90 16.90 16.90 13.74 13.79 13.83 13.80 13.91 13.98 14.15 13.80 13.96 13.92 13.98 13.88 13.88 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 5.760 0 0.098 0.158 6.371 0.909 0.727 - LGA V 3 V 3 4.391 0 0.605 0.965 6.070 1.818 2.078 6.070 LGA Q 4 Q 4 6.836 0 0.080 0.973 15.639 0.000 0.000 15.639 LGA G 5 G 5 4.149 0 0.103 0.103 6.387 2.273 2.273 - LGA P 6 P 6 3.398 0 0.081 0.438 6.605 21.364 12.987 6.605 LGA W 7 W 7 2.104 0 0.430 1.152 10.426 45.455 16.104 10.426 LGA V 8 V 8 2.166 0 0.666 0.668 4.778 33.182 24.935 4.369 LGA G 9 G 9 3.787 0 0.563 0.563 3.787 23.182 23.182 - LGA S 10 S 10 3.905 0 0.115 0.594 6.664 9.545 6.364 6.664 LGA S 11 S 11 9.011 0 0.063 0.064 12.815 0.000 0.000 12.815 LGA Y 12 Y 12 8.376 0 0.082 1.240 16.059 0.000 0.000 16.059 LGA V 13 V 13 2.274 0 0.017 0.082 4.173 27.273 33.766 2.555 LGA A 14 A 14 6.594 0 0.028 0.028 8.697 0.455 0.364 - LGA E 15 E 15 10.612 0 0.054 0.523 17.891 0.000 0.000 17.891 LGA T 16 T 16 7.789 0 0.081 1.133 8.343 0.000 0.000 8.189 LGA G 17 G 17 3.196 0 0.436 0.436 4.814 30.455 30.455 - LGA Q 18 Q 18 1.908 0 0.624 1.473 6.741 35.909 17.374 6.583 LGA N 19 N 19 6.071 0 0.065 0.951 9.779 2.727 1.364 6.068 LGA W 20 W 20 9.829 0 0.587 0.439 20.115 0.000 0.000 20.115 LGA A 21 A 21 7.842 0 0.048 0.045 8.810 0.000 0.000 - LGA S 22 S 22 6.578 0 0.035 0.599 7.323 0.455 0.303 6.286 LGA L 23 L 23 6.117 0 0.094 1.447 10.854 0.455 0.227 9.878 LGA A 24 A 24 5.409 0 0.054 0.049 6.064 4.091 3.273 - LGA A 25 A 25 2.718 0 0.049 0.051 3.799 42.727 37.818 - LGA N 26 N 26 1.191 0 0.053 0.305 2.168 51.364 53.182 1.247 LGA E 27 E 27 3.987 0 0.080 0.992 5.725 10.455 4.646 5.268 LGA L 28 L 28 2.634 0 0.219 1.237 5.638 30.455 30.455 5.638 LGA R 29 R 29 2.064 0 0.027 1.005 8.558 44.545 20.331 6.176 LGA V 30 V 30 1.812 0 0.603 1.017 3.851 37.727 37.662 3.743 LGA T 31 T 31 3.553 0 0.171 0.246 4.752 11.364 11.429 4.077 LGA E 32 E 32 5.748 0 0.604 1.260 11.139 0.909 0.404 11.139 LGA R 33 R 33 5.578 0 0.605 0.958 8.374 0.455 0.331 7.519 LGA P 34 P 34 8.829 0 0.110 0.174 11.638 0.000 0.000 11.638 LGA F 35 F 35 6.327 0 0.349 1.157 10.124 3.182 1.157 10.124 LGA W 36 W 36 3.611 0 0.056 1.126 6.884 5.455 9.870 5.881 LGA I 37 I 37 8.952 0 0.660 1.401 11.852 0.000 0.000 8.937 LGA S 38 S 38 12.230 0 0.670 0.842 14.446 0.000 0.000 12.035 LGA S 39 S 39 16.946 0 0.702 0.587 20.497 0.000 0.000 17.231 LGA F 40 F 40 23.481 0 0.665 0.942 26.424 0.000 0.000 22.496 LGA I 41 I 41 26.645 0 0.070 0.201 29.243 0.000 0.000 22.061 LGA G 42 G 42 33.418 0 0.214 0.214 36.863 0.000 0.000 - LGA R 43 R 43 35.894 0 0.060 1.525 36.408 0.000 0.000 36.262 LGA S 44 S 44 37.306 0 0.000 0.752 39.855 0.000 0.000 38.068 LGA K 45 K 45 40.263 0 0.049 0.977 46.560 0.000 0.000 46.497 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 11.938 11.894 13.023 10.868 8.706 3.273 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 17 2.98 42.045 36.726 0.551 LGA_LOCAL RMSD: 2.984 Number of atoms: 17 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 13.736 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 11.938 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.958885 * X + -0.262814 * Y + -0.107090 * Z + 212.011215 Y_new = -0.094661 * X + 0.651935 * Y + -0.752343 * Z + 84.553284 Z_new = 0.267542 * X + -0.711273 * Y + -0.650009 * Z + 285.810181 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -3.043191 -0.270841 -2.311220 [DEG: -174.3620 -15.5180 -132.4232 ] ZXZ: -0.141392 2.278393 2.781818 [DEG: -8.1012 130.5423 159.3865 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS089_2-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS089_2-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 17 2.98 36.726 11.94 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS089_2-D1 PFRMAT TS TARGET T0953s2 MODEL 2 PARENT N/A ATOM 9 N ALA 2 6.495 38.558 14.389 1.00 10.88 ATOM 10 CA ALA 2 5.302 38.652 13.608 1.00 10.88 ATOM 11 CB ALA 2 5.240 39.911 12.726 1.00 10.88 ATOM 12 C ALA 2 5.322 37.471 12.698 1.00 10.88 ATOM 13 O ALA 2 6.317 37.214 12.022 1.00 10.88 ATOM 14 N VAL 3 4.214 36.711 12.672 1.00 10.03 ATOM 15 CA VAL 3 4.126 35.555 11.833 1.00 10.03 ATOM 16 CB VAL 3 2.874 34.757 12.050 1.00 10.03 ATOM 17 CG1 VAL 3 2.893 34.202 13.483 1.00 10.03 ATOM 18 CG2 VAL 3 1.661 35.650 11.739 1.00 10.03 ATOM 19 C VAL 3 4.128 36.016 10.414 1.00 10.03 ATOM 20 O VAL 3 4.721 35.372 9.550 1.00 10.03 ATOM 21 N GLN 4 3.448 37.147 10.138 1.00 9.84 ATOM 22 CA GLN 4 3.397 37.647 8.794 1.00 9.84 ATOM 23 CB GLN 4 2.227 38.594 8.460 1.00 9.84 ATOM 24 CG GLN 4 0.854 37.960 8.265 1.00 9.84 ATOM 25 CD GLN 4 -0.041 39.071 7.727 1.00 9.84 ATOM 26 OE1 GLN 4 -1.265 38.959 7.718 1.00 9.84 ATOM 27 NE2 GLN 4 0.592 40.181 7.260 1.00 9.84 ATOM 28 C GLN 4 4.596 38.496 8.561 1.00 9.84 ATOM 29 O GLN 4 4.902 39.394 9.344 1.00 9.84 ATOM 30 N GLY 5 5.284 38.246 7.434 1.00 10.07 ATOM 31 CA GLY 5 6.444 39.004 7.083 1.00 10.07 ATOM 32 C GLY 5 6.318 39.310 5.630 1.00 10.07 ATOM 33 O GLY 5 5.252 39.157 5.036 1.00 10.07 ATOM 34 N PRO 6 7.398 39.740 5.048 1.00 9.43 ATOM 35 CA PRO 6 7.391 40.081 3.656 1.00 9.43 ATOM 36 CD PRO 6 8.434 40.446 5.784 1.00 9.43 ATOM 37 CB PRO 6 8.763 40.691 3.381 1.00 9.43 ATOM 38 CG PRO 6 9.155 41.312 4.736 1.00 9.43 ATOM 39 C PRO 6 7.066 38.884 2.838 1.00 9.43 ATOM 40 O PRO 6 6.538 39.041 1.739 1.00 9.43 ATOM 41 N TRP 7 7.376 37.679 3.338 1.00 9.50 ATOM 42 CA TRP 7 7.067 36.541 2.541 1.00 9.50 ATOM 43 CB TRP 7 8.332 35.898 1.979 1.00 9.50 ATOM 44 CG TRP 7 9.044 36.944 1.170 1.00 9.50 ATOM 45 CD2 TRP 7 10.127 37.753 1.643 1.00 9.50 ATOM 46 CD1 TRP 7 8.793 37.347 -0.098 1.00 9.50 ATOM 47 NE1 TRP 7 9.655 38.347 -0.465 1.00 9.50 ATOM 48 CE2 TRP 7 10.481 38.612 0.601 1.00 9.50 ATOM 49 CE3 TRP 7 10.769 37.780 2.846 1.00 9.50 ATOM 50 CZ2 TRP 7 11.490 39.517 0.746 1.00 9.50 ATOM 51 CZ3 TRP 7 11.788 38.693 2.991 1.00 9.50 ATOM 52 CH2 TRP 7 12.136 39.541 1.959 1.00 9.50 ATOM 53 C TRP 7 6.363 35.587 3.434 1.00 9.50 ATOM 54 O TRP 7 6.623 35.546 4.627 1.00 9.50 ATOM 55 N VAL 8 5.392 34.831 2.899 1.00 9.08 ATOM 56 CA VAL 8 4.758 33.877 3.753 1.00 9.08 ATOM 57 CB VAL 8 3.319 34.200 4.048 1.00 9.08 ATOM 58 CG1 VAL 8 2.714 33.061 4.887 1.00 9.08 ATOM 59 CG2 VAL 8 3.255 35.577 4.731 1.00 9.08 ATOM 60 C VAL 8 4.788 32.584 3.015 1.00 9.08 ATOM 61 O VAL 8 4.393 32.523 1.853 1.00 9.08 ATOM 62 N GLY 9 5.265 31.510 3.672 1.00 8.19 ATOM 63 CA GLY 9 5.314 30.242 3.006 1.00 8.19 ATOM 64 C GLY 9 4.314 29.372 3.685 1.00 8.19 ATOM 65 O GLY 9 4.381 29.143 4.892 1.00 8.19 ATOM 66 N SER 10 3.349 28.864 2.902 1.00 7.27 ATOM 67 CA SER 10 2.293 28.049 3.418 1.00 7.27 ATOM 68 CB SER 10 1.211 27.762 2.363 1.00 7.27 ATOM 69 OG SER 10 0.569 28.970 1.984 1.00 7.27 ATOM 70 C SER 10 2.832 26.730 3.868 1.00 7.27 ATOM 71 O SER 10 2.505 26.253 4.952 1.00 7.27 ATOM 72 N SER 11 3.695 26.110 3.043 1.00 8.29 ATOM 73 CA SER 11 4.159 24.790 3.344 1.00 8.29 ATOM 74 CB SER 11 5.114 24.239 2.272 1.00 8.29 ATOM 75 OG SER 11 5.543 22.931 2.623 1.00 8.29 ATOM 76 C SER 11 4.896 24.782 4.645 1.00 8.29 ATOM 77 O SER 11 4.574 23.999 5.538 1.00 8.29 ATOM 78 N TYR 12 5.909 25.658 4.782 1.00 8.30 ATOM 79 CA TYR 12 6.739 25.657 5.952 1.00 8.30 ATOM 80 CB TYR 12 7.968 26.571 5.804 1.00 8.30 ATOM 81 CG TYR 12 8.784 26.005 4.689 1.00 8.30 ATOM 82 CD1 TYR 12 8.534 26.374 3.386 1.00 8.30 ATOM 83 CD2 TYR 12 9.787 25.096 4.941 1.00 8.30 ATOM 84 CE1 TYR 12 9.279 25.854 2.354 1.00 8.30 ATOM 85 CE2 TYR 12 10.536 24.571 3.913 1.00 8.30 ATOM 86 CZ TYR 12 10.282 24.953 2.617 1.00 8.30 ATOM 87 OH TYR 12 11.045 24.420 1.558 1.00 8.30 ATOM 88 C TYR 12 5.971 26.083 7.166 1.00 8.30 ATOM 89 O TYR 12 6.067 25.452 8.217 1.00 8.30 ATOM 90 N VAL 13 5.172 27.160 7.063 1.00 7.50 ATOM 91 CA VAL 13 4.483 27.625 8.231 1.00 7.50 ATOM 92 CB VAL 13 3.649 28.846 7.972 1.00 7.50 ATOM 93 CG1 VAL 13 2.854 29.181 9.246 1.00 7.50 ATOM 94 CG2 VAL 13 4.580 29.979 7.507 1.00 7.50 ATOM 95 C VAL 13 3.560 26.547 8.708 1.00 7.50 ATOM 96 O VAL 13 3.522 26.234 9.897 1.00 7.50 ATOM 97 N ALA 14 2.790 25.958 7.772 1.00 8.27 ATOM 98 CA ALA 14 1.814 24.946 8.064 1.00 8.27 ATOM 99 CB ALA 14 0.979 24.564 6.829 1.00 8.27 ATOM 100 C ALA 14 2.466 23.694 8.568 1.00 8.27 ATOM 101 O ALA 14 1.992 23.084 9.525 1.00 8.27 ATOM 102 N GLU 15 3.586 23.281 7.947 1.00 8.85 ATOM 103 CA GLU 15 4.225 22.047 8.312 1.00 8.85 ATOM 104 CB GLU 15 5.456 21.741 7.443 1.00 8.85 ATOM 105 CG GLU 15 5.924 20.288 7.530 1.00 8.85 ATOM 106 CD GLU 15 5.004 19.460 6.643 1.00 8.85 ATOM 107 OE1 GLU 15 4.952 19.746 5.417 1.00 8.85 ATOM 108 OE2 GLU 15 4.338 18.535 7.178 1.00 8.85 ATOM 109 C GLU 15 4.687 22.175 9.727 1.00 8.85 ATOM 110 O GLU 15 4.639 21.225 10.508 1.00 8.85 ATOM 111 N THR 16 5.137 23.390 10.079 1.00 8.74 ATOM 112 CA THR 16 5.659 23.736 11.366 1.00 8.74 ATOM 113 CB THR 16 6.202 25.135 11.427 1.00 8.74 ATOM 114 OG1 THR 16 7.263 25.293 10.498 1.00 8.74 ATOM 115 CG2 THR 16 6.704 25.424 12.851 1.00 8.74 ATOM 116 C THR 16 4.576 23.639 12.390 1.00 8.74 ATOM 117 O THR 16 4.864 23.405 13.563 1.00 8.74 ATOM 118 N GLY 17 3.294 23.754 11.985 1.00 8.50 ATOM 119 CA GLY 17 2.275 23.835 12.993 1.00 8.50 ATOM 120 C GLY 17 1.677 25.203 12.947 1.00 8.50 ATOM 121 O GLY 17 2.112 26.136 13.623 1.00 8.50 ATOM 122 N GLN 18 0.656 25.328 12.072 1.00 8.65 ATOM 123 CA GLN 18 -0.074 26.532 11.813 1.00 8.65 ATOM 124 CB GLN 18 -1.180 26.356 10.756 1.00 8.65 ATOM 125 CG GLN 18 -1.968 27.637 10.476 1.00 8.65 ATOM 126 CD GLN 18 -1.005 28.660 9.889 1.00 8.65 ATOM 127 OE1 GLN 18 -0.236 28.356 8.978 1.00 8.65 ATOM 128 NE2 GLN 18 -1.040 29.905 10.432 1.00 8.65 ATOM 129 C GLN 18 -0.727 26.985 13.075 1.00 8.65 ATOM 130 O GLN 18 -0.822 28.184 13.324 1.00 8.65 ATOM 131 N ASN 19 -1.214 26.050 13.909 1.00 8.75 ATOM 132 CA ASN 19 -1.831 26.470 15.132 1.00 8.75 ATOM 133 CB ASN 19 -2.383 25.313 15.981 1.00 8.75 ATOM 134 CG ASN 19 -1.217 24.453 16.427 1.00 8.75 ATOM 135 OD1 ASN 19 -0.373 24.065 15.622 1.00 8.75 ATOM 136 ND2 ASN 19 -1.161 24.155 17.754 1.00 8.75 ATOM 137 C ASN 19 -0.784 27.175 15.933 1.00 8.75 ATOM 138 O ASN 19 -1.068 28.145 16.632 1.00 8.75 ATOM 139 N TRP 20 0.473 26.708 15.836 1.00 8.48 ATOM 140 CA TRP 20 1.547 27.320 16.558 1.00 8.48 ATOM 141 CB TRP 20 2.909 26.691 16.218 1.00 8.48 ATOM 142 CG TRP 20 3.064 25.251 16.640 1.00 8.48 ATOM 143 CD2 TRP 20 3.622 24.844 17.898 1.00 8.48 ATOM 144 CD1 TRP 20 2.752 24.108 15.964 1.00 8.48 ATOM 145 NE1 TRP 20 3.082 23.010 16.723 1.00 8.48 ATOM 146 CE2 TRP 20 3.616 23.450 17.917 1.00 8.48 ATOM 147 CE3 TRP 20 4.098 25.573 18.948 1.00 8.48 ATOM 148 CZ2 TRP 20 4.096 22.760 18.994 1.00 8.48 ATOM 149 CZ3 TRP 20 4.577 24.874 20.034 1.00 8.48 ATOM 150 CH2 TRP 20 4.575 23.495 20.056 1.00 8.48 ATOM 151 C TRP 20 1.593 28.737 16.092 1.00 8.48 ATOM 152 O TRP 20 1.742 29.664 16.885 1.00 8.48 ATOM 153 N ALA 21 1.457 28.929 14.768 1.00 7.86 ATOM 154 CA ALA 21 1.455 30.237 14.194 1.00 7.86 ATOM 155 CB ALA 21 1.319 30.224 12.660 1.00 7.86 ATOM 156 C ALA 21 0.279 30.962 14.751 1.00 7.86 ATOM 157 O ALA 21 0.364 32.146 15.053 1.00 7.86 ATOM 158 N SER 22 -0.857 30.263 14.912 1.00 8.06 ATOM 159 CA SER 22 -2.031 30.895 15.433 1.00 8.06 ATOM 160 CB SER 22 -3.208 29.914 15.579 1.00 8.06 ATOM 161 OG SER 22 -3.564 29.394 14.308 1.00 8.06 ATOM 162 C SER 22 -1.684 31.386 16.798 1.00 8.06 ATOM 163 O SER 22 -2.133 32.447 17.224 1.00 8.06 ATOM 164 N LEU 23 -0.871 30.600 17.524 1.00 8.25 ATOM 165 CA LEU 23 -0.450 30.938 18.849 1.00 8.25 ATOM 166 CB LEU 23 0.395 29.811 19.468 1.00 8.25 ATOM 167 CG LEU 23 0.898 30.086 20.896 1.00 8.25 ATOM 168 CD1 LEU 23 -0.267 30.194 21.896 1.00 8.25 ATOM 169 CD2 LEU 23 1.945 29.042 21.310 1.00 8.25 ATOM 170 C LEU 23 0.411 32.160 18.788 1.00 8.25 ATOM 171 O LEU 23 0.204 33.114 19.536 1.00 8.25 ATOM 172 N ALA 24 1.396 32.161 17.870 1.00 8.55 ATOM 173 CA ALA 24 2.317 33.254 17.779 1.00 8.55 ATOM 174 CB ALA 24 3.417 33.029 16.730 1.00 8.55 ATOM 175 C ALA 24 1.569 34.478 17.383 1.00 8.55 ATOM 176 O ALA 24 1.778 35.557 17.929 1.00 8.55 ATOM 177 N ALA 25 0.637 34.339 16.433 1.00 8.20 ATOM 178 CA ALA 25 -0.051 35.493 15.948 1.00 8.20 ATOM 179 CB ALA 25 -1.090 35.156 14.863 1.00 8.20 ATOM 180 C ALA 25 -0.779 36.126 17.090 1.00 8.20 ATOM 181 O ALA 25 -0.777 37.348 17.231 1.00 8.20 ATOM 182 N ASN 26 -1.425 35.308 17.942 1.00 8.11 ATOM 183 CA ASN 26 -2.190 35.852 19.028 1.00 8.11 ATOM 184 CB ASN 26 -3.073 34.800 19.720 1.00 8.11 ATOM 185 CG ASN 26 -4.285 34.567 18.824 1.00 8.11 ATOM 186 OD1 ASN 26 -4.903 35.518 18.345 1.00 8.11 ATOM 187 ND2 ASN 26 -4.638 33.276 18.583 1.00 8.11 ATOM 188 C ASN 26 -1.317 36.506 20.062 1.00 8.11 ATOM 189 O ASN 26 -1.628 37.596 20.542 1.00 8.11 ATOM 190 N GLU 27 -0.195 35.865 20.437 1.00 9.71 ATOM 191 CA GLU 27 0.638 36.392 21.483 1.00 9.71 ATOM 192 CB GLU 27 1.781 35.434 21.864 1.00 9.71 ATOM 193 CG GLU 27 1.289 34.144 22.525 1.00 9.71 ATOM 194 CD GLU 27 2.506 33.291 22.855 1.00 9.71 ATOM 195 OE1 GLU 27 2.997 32.576 21.942 1.00 9.71 ATOM 196 OE2 GLU 27 2.970 33.353 24.024 1.00 9.71 ATOM 197 C GLU 27 1.251 37.692 21.062 1.00 9.71 ATOM 198 O GLU 27 1.307 38.647 21.837 1.00 9.71 ATOM 199 N LEU 28 1.703 37.750 19.800 1.00 8.26 ATOM 200 CA LEU 28 2.365 38.868 19.193 1.00 8.26 ATOM 201 CB LEU 28 2.807 38.472 17.776 1.00 8.26 ATOM 202 CG LEU 28 4.081 37.591 17.783 1.00 8.26 ATOM 203 CD1 LEU 28 4.110 36.554 18.920 1.00 8.26 ATOM 204 CD2 LEU 28 4.258 36.907 16.415 1.00 8.26 ATOM 205 C LEU 28 1.426 40.037 19.194 1.00 8.26 ATOM 206 O LEU 28 1.853 41.178 19.371 1.00 8.26 ATOM 207 N ARG 29 0.114 39.771 19.040 1.00 8.13 ATOM 208 CA ARG 29 -0.898 40.791 19.079 1.00 8.13 ATOM 209 CB ARG 29 -0.774 41.697 20.318 1.00 8.13 ATOM 210 CG ARG 29 -1.022 40.956 21.632 1.00 8.13 ATOM 211 CD ARG 29 -0.861 41.834 22.876 1.00 8.13 ATOM 212 NE ARG 29 0.585 42.184 22.983 1.00 8.13 ATOM 213 CZ ARG 29 1.029 43.024 23.964 1.00 8.13 ATOM 214 NH1 ARG 29 0.150 43.551 24.865 1.00 8.13 ATOM 215 NH2 ARG 29 2.355 43.340 24.041 1.00 8.13 ATOM 216 C ARG 29 -0.841 41.657 17.864 1.00 8.13 ATOM 217 O ARG 29 -1.195 42.835 17.920 1.00 8.13 ATOM 218 N VAL 30 -0.384 41.106 16.724 1.00 9.53 ATOM 219 CA VAL 30 -0.434 41.869 15.517 1.00 9.53 ATOM 220 CB VAL 30 0.228 41.192 14.352 1.00 9.53 ATOM 221 CG1 VAL 30 1.731 41.082 14.653 1.00 9.53 ATOM 222 CG2 VAL 30 -0.454 39.835 14.096 1.00 9.53 ATOM 223 C VAL 30 -1.880 42.076 15.185 1.00 9.53 ATOM 224 O VAL 30 -2.275 43.172 14.820 1.00 9.53 ATOM 225 N THR 31 -2.716 41.025 15.298 1.00 8.79 ATOM 226 CA THR 31 -4.127 41.060 14.992 1.00 8.79 ATOM 227 CB THR 31 -4.969 41.945 15.875 1.00 8.79 ATOM 228 OG1 THR 31 -4.678 43.319 15.679 1.00 8.79 ATOM 229 CG2 THR 31 -4.697 41.550 17.335 1.00 8.79 ATOM 230 C THR 31 -4.296 41.473 13.567 1.00 8.79 ATOM 231 O THR 31 -5.372 41.881 13.131 1.00 8.79 ATOM 232 N GLU 32 -3.198 41.369 12.803 1.00 9.79 ATOM 233 CA GLU 32 -3.174 41.630 11.401 1.00 9.79 ATOM 234 CB GLU 32 -4.078 40.660 10.615 1.00 9.79 ATOM 235 CG GLU 32 -3.584 39.211 10.667 1.00 9.79 ATOM 236 CD GLU 32 -4.558 38.331 9.893 1.00 9.79 ATOM 237 OE1 GLU 32 -5.792 38.502 10.083 1.00 9.79 ATOM 238 OE2 GLU 32 -4.078 37.478 9.098 1.00 9.79 ATOM 239 C GLU 32 -3.594 43.043 11.135 1.00 9.79 ATOM 240 O GLU 32 -3.768 43.419 9.977 1.00 9.79 ATOM 241 N ARG 33 -3.745 43.879 12.185 1.00 10.80 ATOM 242 CA ARG 33 -4.016 45.267 11.930 1.00 10.80 ATOM 243 CB ARG 33 -4.404 46.121 13.152 1.00 10.80 ATOM 244 CG ARG 33 -5.907 46.127 13.436 1.00 10.80 ATOM 245 CD ARG 33 -6.435 44.925 14.211 1.00 10.80 ATOM 246 NE ARG 33 -6.478 45.329 15.646 1.00 10.80 ATOM 247 CZ ARG 33 -7.553 45.009 16.425 1.00 10.80 ATOM 248 NH1 ARG 33 -8.624 44.356 15.884 1.00 10.80 ATOM 249 NH2 ARG 33 -7.553 45.340 17.749 1.00 10.80 ATOM 250 C ARG 33 -2.779 45.816 11.318 1.00 10.80 ATOM 251 O ARG 33 -2.813 46.610 10.380 1.00 10.80 ATOM 252 N PRO 34 -1.673 45.359 11.827 1.00 10.02 ATOM 253 CA PRO 34 -0.454 45.714 11.195 1.00 10.02 ATOM 254 CD PRO 34 -1.486 45.336 13.262 1.00 10.02 ATOM 255 CB PRO 34 0.648 45.191 12.107 1.00 10.02 ATOM 256 CG PRO 34 0.030 45.396 13.501 1.00 10.02 ATOM 257 C PRO 34 -0.522 45.132 9.834 1.00 10.02 ATOM 258 O PRO 34 -1.342 44.243 9.602 1.00 10.02 ATOM 259 N PHE 35 0.354 45.577 8.925 1.00 10.18 ATOM 260 CA PHE 35 0.218 45.145 7.570 1.00 10.18 ATOM 261 CB PHE 35 0.497 43.640 7.387 1.00 10.18 ATOM 262 CG PHE 35 0.455 43.343 5.927 1.00 10.18 ATOM 263 CD1 PHE 35 1.530 43.652 5.125 1.00 10.18 ATOM 264 CD2 PHE 35 -0.649 42.750 5.355 1.00 10.18 ATOM 265 CE1 PHE 35 1.503 43.381 3.776 1.00 10.18 ATOM 266 CE2 PHE 35 -0.682 42.476 4.007 1.00 10.18 ATOM 267 CZ PHE 35 0.396 42.793 3.215 1.00 10.18 ATOM 268 C PHE 35 -1.155 45.450 7.047 1.00 10.18 ATOM 269 O PHE 35 -2.002 44.569 6.905 1.00 10.18 ATOM 270 N TRP 36 -1.419 46.759 6.829 1.00 9.04 ATOM 271 CA TRP 36 -2.665 47.236 6.293 1.00 9.04 ATOM 272 CB TRP 36 -3.254 48.371 7.150 1.00 9.04 ATOM 273 CG TRP 36 -4.593 48.913 6.714 1.00 9.04 ATOM 274 CD2 TRP 36 -5.846 48.308 7.060 1.00 9.04 ATOM 275 CD1 TRP 36 -4.887 50.012 5.961 1.00 9.04 ATOM 276 NE1 TRP 36 -6.249 50.132 5.818 1.00 9.04 ATOM 277 CE2 TRP 36 -6.852 49.088 6.490 1.00 9.04 ATOM 278 CE3 TRP 36 -6.135 47.191 7.792 1.00 9.04 ATOM 279 CZ2 TRP 36 -8.169 48.758 6.644 1.00 9.04 ATOM 280 CZ3 TRP 36 -7.463 46.866 7.951 1.00 9.04 ATOM 281 CH2 TRP 36 -8.460 47.635 7.388 1.00 9.04 ATOM 282 C TRP 36 -2.411 47.757 4.907 1.00 9.04 ATOM 283 O TRP 36 -1.359 48.330 4.626 1.00 9.04 ATOM 284 N ILE 37 -3.374 47.538 3.986 1.00 8.95 ATOM 285 CA ILE 37 -3.221 47.997 2.633 1.00 8.95 ATOM 286 CB ILE 37 -3.151 46.881 1.624 1.00 8.95 ATOM 287 CG1 ILE 37 -1.896 46.019 1.840 1.00 8.95 ATOM 288 CG2 ILE 37 -3.238 47.504 0.220 1.00 8.95 ATOM 289 CD1 ILE 37 -1.938 45.198 3.125 1.00 8.95 ATOM 290 C ILE 37 -4.424 48.812 2.280 1.00 8.95 ATOM 291 O ILE 37 -5.551 48.447 2.614 1.00 8.95 ATOM 292 N SER 38 -4.219 49.960 1.602 1.00 8.22 ATOM 293 CA SER 38 -5.347 50.754 1.218 1.00 8.22 ATOM 294 CB SER 38 -5.560 51.990 2.113 1.00 8.22 ATOM 295 OG SER 38 -6.682 52.742 1.669 1.00 8.22 ATOM 296 C SER 38 -5.111 51.265 -0.162 1.00 8.22 ATOM 297 O SER 38 -4.030 51.759 -0.475 1.00 8.22 ATOM 298 N SER 39 -6.134 51.143 -1.027 1.00 9.63 ATOM 299 CA SER 39 -6.045 51.649 -2.362 1.00 9.63 ATOM 300 CB SER 39 -5.592 50.588 -3.383 1.00 9.63 ATOM 301 OG SER 39 -6.531 49.523 -3.438 1.00 9.63 ATOM 302 C SER 39 -7.423 52.103 -2.722 1.00 9.63 ATOM 303 O SER 39 -8.409 51.482 -2.329 1.00 9.63 ATOM 304 N PHE 40 -7.532 53.221 -3.462 1.00 9.39 ATOM 305 CA PHE 40 -8.834 53.682 -3.847 1.00 9.39 ATOM 306 CB PHE 40 -9.127 55.138 -3.444 1.00 9.39 ATOM 307 CG PHE 40 -9.259 55.175 -1.959 1.00 9.39 ATOM 308 CD1 PHE 40 -8.143 55.243 -1.158 1.00 9.39 ATOM 309 CD2 PHE 40 -10.501 55.145 -1.369 1.00 9.39 ATOM 310 CE1 PHE 40 -8.267 55.279 0.210 1.00 9.39 ATOM 311 CE2 PHE 40 -10.631 55.181 -0.001 1.00 9.39 ATOM 312 CZ PHE 40 -9.512 55.247 0.792 1.00 9.39 ATOM 313 C PHE 40 -8.897 53.596 -5.333 1.00 9.39 ATOM 314 O PHE 40 -7.947 53.961 -6.025 1.00 9.39 ATOM 315 N ILE 41 -10.023 53.092 -5.871 1.00 9.74 ATOM 316 CA ILE 41 -10.084 52.935 -7.294 1.00 9.74 ATOM 317 CB ILE 41 -10.440 51.536 -7.697 1.00 9.74 ATOM 318 CG1 ILE 41 -9.416 50.533 -7.142 1.00 9.74 ATOM 319 CG2 ILE 41 -10.575 51.501 -9.228 1.00 9.74 ATOM 320 CD1 ILE 41 -9.897 49.084 -7.216 1.00 9.74 ATOM 321 C ILE 41 -11.169 53.811 -7.834 1.00 9.74 ATOM 322 O ILE 41 -12.349 53.565 -7.592 1.00 9.74 ATOM 323 N GLY 42 -10.793 54.885 -8.558 1.00 10.29 ATOM 324 CA GLY 42 -11.782 55.703 -9.197 1.00 10.29 ATOM 325 C GLY 42 -12.381 54.898 -10.307 1.00 10.29 ATOM 326 O GLY 42 -13.595 54.882 -10.499 1.00 10.29 ATOM 327 N ARG 43 -11.522 54.214 -11.086 1.00 8.16 ATOM 328 CA ARG 43 -11.993 53.401 -12.168 1.00 8.16 ATOM 329 CB ARG 43 -11.883 54.074 -13.546 1.00 8.16 ATOM 330 CG ARG 43 -10.458 54.484 -13.914 1.00 8.16 ATOM 331 CD ARG 43 -10.223 55.994 -13.871 1.00 8.16 ATOM 332 NE ARG 43 -10.381 56.435 -12.459 1.00 8.16 ATOM 333 CZ ARG 43 -9.914 57.656 -12.072 1.00 8.16 ATOM 334 NH1 ARG 43 -9.256 58.451 -12.965 1.00 8.16 ATOM 335 NH2 ARG 43 -10.105 58.080 -10.788 1.00 8.16 ATOM 336 C ARG 43 -11.132 52.191 -12.201 1.00 8.16 ATOM 337 O ARG 43 -9.929 52.269 -11.952 1.00 8.16 ATOM 338 N SER 44 -11.722 51.022 -12.512 1.00 7.33 ATOM 339 CA SER 44 -10.872 49.876 -12.523 1.00 7.33 ATOM 340 CB SER 44 -11.203 48.822 -11.453 1.00 7.33 ATOM 341 OG SER 44 -12.379 48.112 -11.810 1.00 7.33 ATOM 342 C SER 44 -10.980 49.193 -13.844 1.00 7.33 ATOM 343 O SER 44 -12.035 49.177 -14.476 1.00 7.33 ATOM 344 N LYS 45 -9.842 48.633 -14.294 1.00 6.19 ATOM 345 CA LYS 45 -9.756 47.868 -15.501 1.00 6.19 ATOM 346 CB LYS 45 -9.074 48.612 -16.665 1.00 6.19 ATOM 347 CG LYS 45 -9.998 49.607 -17.362 1.00 6.19 ATOM 348 CD LYS 45 -11.170 48.920 -18.067 1.00 6.19 ATOM 349 CE LYS 45 -12.134 49.881 -18.765 1.00 6.19 ATOM 350 NZ LYS 45 -13.164 49.111 -19.497 1.00 6.19 ATOM 351 C LYS 45 -8.904 46.689 -15.162 1.00 6.19 ATOM 352 O LYS 45 -7.972 46.801 -14.366 1.00 6.19 TER END