####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS086_5-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_5-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 21 12 - 32 4.89 12.94 LCS_AVERAGE: 44.58 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 19 - 29 1.67 10.72 LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.95 11.38 LCS_AVERAGE: 16.94 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 10 20 - 29 0.62 11.33 LCS_AVERAGE: 12.65 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 12 3 3 3 3 4 4 6 9 9 9 20 20 21 24 27 28 30 32 34 36 LCS_GDT V 3 V 3 3 4 16 3 3 3 4 4 5 10 10 13 14 20 20 21 26 27 29 30 32 34 36 LCS_GDT Q 4 Q 4 4 4 19 3 3 4 4 5 5 10 10 13 14 20 20 21 23 25 28 30 32 34 36 LCS_GDT G 5 G 5 4 4 20 0 3 4 4 5 5 10 12 13 14 20 20 21 22 25 26 28 32 33 35 LCS_GDT P 6 P 6 4 7 20 3 3 4 8 8 8 10 12 13 14 20 20 21 23 26 28 30 32 34 36 LCS_GDT W 7 W 7 6 7 20 3 4 6 8 9 13 14 15 17 18 20 23 26 26 29 30 30 32 34 36 LCS_GDT V 8 V 8 6 7 20 3 5 6 8 11 13 14 15 17 19 23 24 27 28 29 30 30 33 34 36 LCS_GDT G 9 G 9 6 7 20 3 5 7 8 11 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT S 10 S 10 6 7 20 3 5 6 8 11 13 15 16 17 21 22 24 27 28 29 30 30 33 34 36 LCS_GDT S 11 S 11 6 7 20 5 6 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT Y 12 Y 12 6 7 21 1 5 6 8 10 13 14 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT V 13 V 13 5 6 21 4 4 4 5 6 7 10 12 14 18 20 22 24 25 27 29 30 33 34 36 LCS_GDT A 14 A 14 5 6 21 4 4 4 5 7 7 10 11 13 15 17 22 23 25 27 29 30 33 33 33 LCS_GDT E 15 E 15 5 6 21 4 4 4 5 7 8 10 12 13 15 17 20 22 25 27 29 30 33 33 33 LCS_GDT T 16 T 16 5 6 21 4 4 4 5 7 8 10 12 13 15 16 19 22 25 27 29 30 33 33 35 LCS_GDT G 17 G 17 5 6 21 0 3 4 5 7 8 10 11 13 15 18 22 24 25 27 29 30 33 34 36 LCS_GDT Q 18 Q 18 3 6 21 3 3 4 5 7 9 10 12 15 19 21 22 26 26 29 30 30 33 34 36 LCS_GDT N 19 N 19 3 11 21 3 4 6 7 11 13 14 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT W 20 W 20 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT A 21 A 21 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT S 22 S 22 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT L 23 L 23 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT A 24 A 24 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT A 25 A 25 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT N 26 N 26 10 11 21 5 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT E 27 E 27 10 11 21 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT L 28 L 28 10 11 21 5 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT R 29 R 29 10 11 21 5 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT V 30 V 30 3 11 21 3 3 3 5 7 9 10 14 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT T 31 T 31 4 5 21 3 4 4 5 9 11 12 13 16 19 23 24 27 28 29 30 30 33 34 36 LCS_GDT E 32 E 32 4 5 21 3 4 6 6 9 11 12 13 16 19 23 24 27 28 29 30 30 33 34 36 LCS_GDT R 33 R 33 4 7 20 2 4 4 5 6 9 10 12 14 18 20 20 23 26 28 29 30 33 34 36 LCS_GDT P 34 P 34 4 7 20 2 4 4 5 9 9 11 13 15 18 20 21 25 26 28 29 30 33 34 36 LCS_GDT F 35 F 35 3 7 20 2 3 5 7 8 11 12 15 16 19 23 24 27 28 29 30 30 33 34 36 LCS_GDT W 36 W 36 4 7 20 3 4 4 4 6 9 10 10 16 19 23 24 27 28 29 30 30 33 34 36 LCS_GDT I 37 I 37 4 7 20 3 4 4 5 7 9 11 14 17 18 21 23 26 28 29 30 30 33 34 36 LCS_GDT S 38 S 38 4 7 20 3 4 4 5 7 9 14 16 17 21 22 23 27 28 29 30 30 33 34 35 LCS_GDT S 39 S 39 4 7 20 3 4 4 5 7 8 10 10 17 18 22 23 27 28 29 30 30 33 34 36 LCS_GDT F 40 F 40 4 6 20 5 6 9 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT I 41 I 41 4 6 20 3 3 5 5 6 6 8 15 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT G 42 G 42 4 6 20 3 3 5 8 11 13 14 16 17 21 23 24 27 28 29 30 30 33 34 36 LCS_GDT R 43 R 43 4 6 13 3 3 4 5 7 9 15 16 17 21 22 23 27 28 29 30 30 33 34 35 LCS_GDT S 44 S 44 3 6 11 3 3 5 5 6 6 7 9 12 15 17 22 23 25 27 29 30 33 33 33 LCS_GDT K 45 K 45 3 6 11 3 3 5 5 6 8 9 9 10 10 14 14 18 22 23 27 28 29 29 31 LCS_AVERAGE LCS_A: 24.72 ( 12.65 16.94 44.58 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 7 9 10 12 12 13 15 16 17 21 23 24 27 28 29 30 30 33 34 36 GDT PERCENT_AT 15.91 20.45 22.73 27.27 27.27 29.55 34.09 36.36 38.64 47.73 52.27 54.55 61.36 63.64 65.91 68.18 68.18 75.00 77.27 81.82 GDT RMS_LOCAL 0.17 0.46 0.62 1.18 1.18 1.47 2.03 2.23 2.53 3.34 4.09 4.15 4.47 4.55 4.75 4.97 4.97 5.85 6.10 6.42 GDT RMS_ALL_AT 12.14 11.64 11.33 10.59 10.59 10.61 10.36 10.21 10.01 9.90 9.16 9.30 9.37 9.39 9.39 9.25 9.25 8.99 9.01 8.90 # Checking swapping # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 19.765 0 0.096 0.138 22.143 0.000 0.000 - LGA V 3 V 3 14.681 0 0.654 0.947 16.649 0.000 0.000 11.979 LGA Q 4 Q 4 17.675 0 0.676 1.086 24.335 0.000 0.000 21.657 LGA G 5 G 5 16.686 0 0.429 0.429 17.411 0.000 0.000 - LGA P 6 P 6 12.816 0 0.390 0.355 16.100 0.000 0.000 15.464 LGA W 7 W 7 7.333 0 0.419 1.271 9.352 0.455 4.156 5.039 LGA V 8 V 8 5.179 0 0.048 1.199 8.643 9.545 5.455 7.770 LGA G 9 G 9 3.167 0 0.200 0.200 3.911 29.545 29.545 - LGA S 10 S 10 2.922 0 0.143 0.575 4.835 25.909 19.394 4.835 LGA S 11 S 11 3.106 0 0.328 0.633 6.609 14.545 16.364 4.733 LGA Y 12 Y 12 5.331 0 0.620 1.392 7.596 2.727 7.727 3.929 LGA V 13 V 13 11.595 0 0.530 1.418 14.225 0.000 0.000 14.019 LGA A 14 A 14 16.855 0 0.073 0.076 19.246 0.000 0.000 - LGA E 15 E 15 17.851 0 0.208 1.237 21.190 0.000 0.000 20.642 LGA T 16 T 16 15.942 0 0.659 1.309 16.393 0.000 0.000 13.107 LGA G 17 G 17 15.400 0 0.706 0.706 16.311 0.000 0.000 - LGA Q 18 Q 18 11.270 0 0.634 0.613 15.877 0.000 0.000 12.461 LGA N 19 N 19 6.073 0 0.046 0.956 10.136 14.091 7.045 10.136 LGA W 20 W 20 3.178 0 0.642 0.486 10.142 26.364 7.532 10.142 LGA A 21 A 21 1.841 0 0.035 0.029 2.273 59.091 57.455 - LGA S 22 S 22 0.814 0 0.150 0.174 2.083 70.000 61.515 2.083 LGA L 23 L 23 1.625 0 0.085 0.107 4.626 70.000 40.682 4.626 LGA A 24 A 24 1.084 0 0.000 0.030 1.751 73.636 69.091 - LGA A 25 A 25 1.361 0 0.050 0.055 1.878 65.909 62.909 - LGA N 26 N 26 1.247 0 0.033 0.138 2.082 69.545 60.455 2.082 LGA E 27 E 27 0.419 0 0.090 1.070 5.645 86.364 53.333 5.645 LGA L 28 L 28 0.866 0 0.242 0.248 1.896 70.000 65.909 1.896 LGA R 29 R 29 0.972 0 0.390 1.237 11.506 46.818 19.174 11.506 LGA V 30 V 30 8.146 0 0.633 0.619 12.918 0.000 0.000 12.918 LGA T 31 T 31 11.431 0 0.119 0.142 14.303 0.000 0.000 12.278 LGA E 32 E 32 12.258 0 0.443 0.926 13.857 0.000 0.000 10.640 LGA R 33 R 33 16.130 0 0.087 1.200 16.720 0.000 0.000 13.626 LGA P 34 P 34 16.827 0 0.116 0.132 21.385 0.000 0.000 21.385 LGA F 35 F 35 9.986 0 0.574 1.315 15.040 0.000 0.000 15.040 LGA W 36 W 36 9.980 0 0.638 1.284 18.115 0.000 0.000 18.115 LGA I 37 I 37 9.389 0 0.050 1.417 14.087 0.000 0.000 13.454 LGA S 38 S 38 6.814 0 0.199 0.198 7.434 0.000 0.000 5.275 LGA S 39 S 39 5.660 0 0.266 0.642 6.262 1.364 0.909 5.555 LGA F 40 F 40 0.990 0 0.627 1.437 8.851 46.364 19.835 8.851 LGA I 41 I 41 5.403 0 0.626 0.642 9.852 2.727 1.364 9.852 LGA G 42 G 42 3.900 0 0.667 0.667 3.900 19.545 19.545 - LGA R 43 R 43 3.413 0 0.650 1.236 14.152 14.091 5.124 14.152 LGA S 44 S 44 10.014 0 0.044 0.699 11.885 0.000 0.000 11.381 LGA K 45 K 45 16.147 0 0.677 0.808 26.848 0.000 0.000 26.848 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.621 8.584 9.763 18.605 14.421 4.104 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 16 2.23 38.068 32.954 0.688 LGA_LOCAL RMSD: 2.226 Number of atoms: 16 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.212 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.621 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.526562 * X + -0.796941 * Y + -0.296003 * Z + 219.567032 Y_new = -0.025352 * X + -0.362748 * Y + 0.931542 * Z + -133.887833 Z_new = -0.849759 * X + -0.483010 * Y + -0.211214 * Z + 260.432220 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.048110 1.015527 -1.983027 [DEG: -2.7565 58.1854 -113.6191 ] ZXZ: -2.833927 1.783613 -2.087663 [DEG: -162.3721 102.1935 -119.6143 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS086_5-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_5-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 16 2.23 32.954 8.62 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS086_5-D1 PFRMAT TS TARGET T0953s2 MODEL 5 PARENT N/A ATOM 20 N ALA 2 -0.782 22.156 3.704 1.00 7.00 N ATOM 21 CA ALA 2 0.591 21.912 4.141 1.00 7.00 C ATOM 22 C ALA 2 1.550 22.834 3.409 1.00 7.00 C ATOM 23 O ALA 2 1.472 22.956 2.184 1.00 7.00 O ATOM 24 CB ALA 2 0.987 20.467 3.888 1.00 7.00 C ATOM 30 N VAL 3 2.549 23.320 4.145 1.00 7.00 N ATOM 31 CA VAL 3 3.585 24.239 3.656 1.00 7.00 C ATOM 32 C VAL 3 4.427 23.732 2.482 1.00 7.00 C ATOM 33 O VAL 3 5.202 24.482 1.901 1.00 7.00 O ATOM 34 CB VAL 3 4.500 24.655 4.827 1.00 7.00 C ATOM 35 CG1 VAL 3 3.668 25.426 5.876 1.00 7.00 C ATOM 36 CG2 VAL 3 5.153 23.409 5.438 1.00 7.00 C ATOM 46 N GLN 4 4.299 22.459 2.133 1.00 7.00 N ATOM 47 CA GLN 4 5.015 21.904 0.991 1.00 7.00 C ATOM 48 C GLN 4 4.643 22.647 -0.314 1.00 7.00 C ATOM 49 O GLN 4 5.412 22.655 -1.278 1.00 7.00 O ATOM 50 CB GLN 4 4.657 20.423 0.843 1.00 7.00 C ATOM 51 CG GLN 4 3.212 20.191 0.388 1.00 7.00 C ATOM 52 CD GLN 4 2.803 18.765 0.427 1.00 7.00 C ATOM 53 OE1 GLN 4 3.634 17.857 0.379 1.00 7.00 O ATOM 54 NE2 GLN 4 1.498 18.547 0.508 1.00 7.00 N ATOM 63 N GLY 5 3.455 23.264 -0.322 1.00 7.00 N ATOM 64 CA GLY 5 2.906 24.021 -1.447 1.00 7.00 C ATOM 65 C GLY 5 2.935 25.501 -1.064 1.00 7.00 C ATOM 66 O GLY 5 3.849 26.251 -1.454 1.00 7.00 O ATOM 70 N PRO 6 1.928 25.977 -0.320 1.00 7.00 N ATOM 71 CA PRO 6 1.834 27.307 0.231 1.00 7.00 C ATOM 72 C PRO 6 2.753 27.490 1.438 1.00 7.00 C ATOM 73 O PRO 6 2.294 27.714 2.562 1.00 7.00 O ATOM 74 CB PRO 6 0.349 27.403 0.611 1.00 7.00 C ATOM 75 CG PRO 6 -0.036 25.992 0.949 1.00 7.00 C ATOM 76 CD PRO 6 0.719 25.156 -0.081 1.00 7.00 C ATOM 84 N TRP 7 4.060 27.424 1.162 1.00 7.00 N ATOM 85 CA TRP 7 5.183 27.598 2.100 1.00 7.00 C ATOM 86 C TRP 7 5.035 28.885 2.919 1.00 7.00 C ATOM 87 O TRP 7 5.540 29.018 4.044 1.00 7.00 O ATOM 88 CB TRP 7 6.478 27.655 1.293 1.00 7.00 C ATOM 89 CG TRP 7 6.574 28.909 0.527 1.00 7.00 C ATOM 90 CD1 TRP 7 6.104 29.167 -0.723 1.00 7.00 C ATOM 91 CD2 TRP 7 7.205 30.121 0.976 1.00 7.00 C ATOM 92 NE1 TRP 7 6.373 30.454 -1.054 1.00 7.00 N ATOM 93 CE2 TRP 7 7.046 31.051 -0.028 1.00 7.00 C ATOM 94 CE3 TRP 7 7.867 30.484 2.154 1.00 7.00 C ATOM 95 CZ2 TRP 7 7.515 32.333 0.098 1.00 7.00 C ATOM 96 CZ3 TRP 7 8.331 31.755 2.283 1.00 7.00 C ATOM 97 CH2 TRP 7 8.160 32.655 1.296 1.00 7.00 C ATOM 108 N VAL 8 4.279 29.801 2.323 1.00 7.00 N ATOM 109 CA VAL 8 3.957 31.141 2.748 1.00 7.00 C ATOM 110 C VAL 8 3.354 31.204 4.130 1.00 7.00 C ATOM 111 O VAL 8 3.354 32.250 4.764 1.00 7.00 O ATOM 112 CB VAL 8 2.945 31.765 1.771 1.00 7.00 C ATOM 113 CG1 VAL 8 3.537 31.846 0.377 1.00 7.00 C ATOM 114 CG2 VAL 8 1.675 30.952 1.694 1.00 7.00 C ATOM 124 N GLY 9 2.858 30.083 4.632 1.00 7.00 N ATOM 125 CA GLY 9 2.260 30.045 5.954 1.00 7.00 C ATOM 126 C GLY 9 3.176 30.574 7.056 1.00 7.00 C ATOM 127 O GLY 9 2.703 31.011 8.104 1.00 7.00 O ATOM 131 N SER 10 4.487 30.554 6.820 1.00 7.00 N ATOM 132 CA SER 10 5.461 31.051 7.789 1.00 7.00 C ATOM 133 C SER 10 5.807 32.551 7.660 1.00 7.00 C ATOM 134 O SER 10 6.623 33.051 8.440 1.00 7.00 O ATOM 135 CB SER 10 6.744 30.246 7.682 1.00 7.00 C ATOM 136 OG SER 10 6.548 28.902 8.048 1.00 7.00 O ATOM 142 N SER 11 5.242 33.271 6.677 1.00 7.00 N ATOM 143 CA SER 11 5.603 34.684 6.481 1.00 7.00 C ATOM 144 C SER 11 4.468 35.705 6.235 1.00 7.00 C ATOM 145 O SER 11 4.744 36.795 5.732 1.00 7.00 O ATOM 146 CB SER 11 6.610 34.804 5.342 1.00 7.00 C ATOM 147 OG SER 11 6.095 34.323 4.131 1.00 7.00 O ATOM 153 N TYR 12 3.221 35.411 6.625 1.00 7.00 N ATOM 154 CA TYR 12 2.095 36.344 6.389 1.00 7.00 C ATOM 155 C TYR 12 2.307 37.738 6.956 1.00 7.00 C ATOM 156 O TYR 12 2.850 37.937 8.052 1.00 7.00 O ATOM 157 CB TYR 12 0.734 35.808 6.901 1.00 7.00 C ATOM 158 CG TYR 12 0.034 34.853 5.948 1.00 7.00 C ATOM 159 CD1 TYR 12 0.716 33.862 5.335 1.00 7.00 C ATOM 160 CD2 TYR 12 -1.317 35.019 5.663 1.00 7.00 C ATOM 161 CE1 TYR 12 0.097 33.055 4.453 1.00 7.00 C ATOM 162 CE2 TYR 12 -1.947 34.199 4.759 1.00 7.00 C ATOM 163 CZ TYR 12 -1.236 33.222 4.151 1.00 7.00 C ATOM 164 OH TYR 12 -1.840 32.396 3.226 1.00 7.00 O ATOM 174 N VAL 13 1.833 38.711 6.180 1.00 7.00 N ATOM 175 CA VAL 13 1.965 40.128 6.471 1.00 7.00 C ATOM 176 C VAL 13 0.630 40.879 6.649 1.00 7.00 C ATOM 177 O VAL 13 -0.447 40.332 6.455 1.00 7.00 O ATOM 178 CB VAL 13 2.739 40.809 5.328 1.00 7.00 C ATOM 179 CG1 VAL 13 4.110 40.148 5.178 1.00 7.00 C ATOM 180 CG2 VAL 13 1.982 40.785 4.000 1.00 7.00 C ATOM 190 N ALA 14 0.702 42.161 6.992 1.00 7.00 N ATOM 191 CA ALA 14 -0.484 42.994 7.200 1.00 7.00 C ATOM 192 C ALA 14 -1.421 43.071 5.992 1.00 7.00 C ATOM 193 O ALA 14 -2.635 43.199 6.137 1.00 7.00 O ATOM 194 CB ALA 14 -0.053 44.409 7.523 1.00 7.00 C ATOM 200 N GLU 15 -0.848 43.005 4.796 1.00 7.00 N ATOM 201 CA GLU 15 -1.572 43.152 3.536 1.00 7.00 C ATOM 202 C GLU 15 -2.179 41.848 2.976 1.00 7.00 C ATOM 203 O GLU 15 -2.763 41.855 1.889 1.00 7.00 O ATOM 204 CB GLU 15 -0.606 43.726 2.500 1.00 7.00 C ATOM 205 CG GLU 15 0.007 45.099 2.840 1.00 7.00 C ATOM 206 CD GLU 15 -0.973 46.240 2.929 1.00 7.00 C ATOM 207 OE1 GLU 15 -1.893 46.279 2.156 1.00 7.00 O ATOM 208 OE2 GLU 15 -0.782 47.091 3.773 1.00 7.00 O ATOM 215 N THR 16 -2.025 40.735 3.694 1.00 7.00 N ATOM 216 CA THR 16 -2.511 39.417 3.260 1.00 7.00 C ATOM 217 C THR 16 -3.447 38.788 4.275 1.00 7.00 C ATOM 218 O THR 16 -3.874 39.434 5.233 1.00 7.00 O ATOM 219 CB THR 16 -1.352 38.439 3.007 1.00 7.00 C ATOM 220 OG1 THR 16 -1.819 37.235 2.395 1.00 7.00 O ATOM 221 CG2 THR 16 -0.711 38.120 4.281 1.00 7.00 C ATOM 229 N GLY 17 -3.789 37.526 4.040 1.00 7.00 N ATOM 230 CA GLY 17 -4.665 36.805 4.945 1.00 7.00 C ATOM 231 C GLY 17 -5.806 36.131 4.205 1.00 7.00 C ATOM 232 O GLY 17 -5.895 36.243 2.985 1.00 7.00 O ATOM 236 N GLN 18 -6.691 35.423 4.931 1.00 7.00 N ATOM 237 CA GLN 18 -6.639 35.205 6.387 1.00 7.00 C ATOM 238 C GLN 18 -6.265 33.780 6.791 1.00 7.00 C ATOM 239 O GLN 18 -6.259 33.457 7.984 1.00 7.00 O ATOM 240 CB GLN 18 -7.979 35.585 7.018 1.00 7.00 C ATOM 241 CG GLN 18 -8.336 37.054 6.886 1.00 7.00 C ATOM 242 CD GLN 18 -7.338 37.942 7.612 1.00 7.00 C ATOM 243 OE1 GLN 18 -6.972 37.658 8.756 1.00 7.00 O ATOM 244 NE2 GLN 18 -6.897 39.006 6.958 1.00 7.00 N ATOM 253 N ASN 19 -5.890 32.946 5.812 1.00 7.00 N ATOM 254 CA ASN 19 -5.625 31.521 6.065 1.00 7.00 C ATOM 255 C ASN 19 -4.641 31.256 7.193 1.00 7.00 C ATOM 256 O ASN 19 -4.864 30.366 8.009 1.00 7.00 O ATOM 257 CB ASN 19 -5.106 30.865 4.803 1.00 7.00 C ATOM 258 CG ASN 19 -6.164 30.709 3.754 1.00 7.00 C ATOM 259 OD1 ASN 19 -7.367 30.793 4.028 1.00 7.00 O ATOM 260 ND2 ASN 19 -5.740 30.483 2.541 1.00 7.00 N ATOM 267 N TRP 20 -3.566 32.025 7.257 1.00 7.00 N ATOM 268 CA TRP 20 -2.614 31.867 8.342 1.00 7.00 C ATOM 269 C TRP 20 -2.628 33.073 9.273 1.00 7.00 C ATOM 270 O TRP 20 -2.245 32.972 10.440 1.00 7.00 O ATOM 271 CB TRP 20 -1.235 31.629 7.785 1.00 7.00 C ATOM 272 CG TRP 20 -1.096 30.315 7.111 1.00 7.00 C ATOM 273 CD1 TRP 20 -1.312 30.053 5.803 1.00 7.00 C ATOM 274 CD2 TRP 20 -0.641 29.082 7.687 1.00 7.00 C ATOM 275 NE1 TRP 20 -1.022 28.764 5.528 1.00 7.00 N ATOM 276 CE2 TRP 20 -0.608 28.148 6.658 1.00 7.00 C ATOM 277 CE3 TRP 20 -0.250 28.704 8.964 1.00 7.00 C ATOM 278 CZ2 TRP 20 -0.195 26.850 6.857 1.00 7.00 C ATOM 279 CZ3 TRP 20 0.160 27.399 9.169 1.00 7.00 C ATOM 280 CH2 TRP 20 0.186 26.496 8.139 1.00 7.00 C ATOM 291 N ALA 21 -3.057 34.234 8.762 1.00 7.00 N ATOM 292 CA ALA 21 -3.033 35.469 9.550 1.00 7.00 C ATOM 293 C ALA 21 -3.923 35.342 10.776 1.00 7.00 C ATOM 294 O ALA 21 -3.578 35.819 11.864 1.00 7.00 O ATOM 295 CB ALA 21 -3.497 36.647 8.712 1.00 7.00 C ATOM 301 N SER 22 -5.046 34.645 10.621 1.00 7.00 N ATOM 302 CA SER 22 -6.006 34.458 11.691 1.00 7.00 C ATOM 303 C SER 22 -5.513 33.501 12.777 1.00 7.00 C ATOM 304 O SER 22 -6.112 33.409 13.848 1.00 7.00 O ATOM 305 CB SER 22 -7.327 33.987 11.114 1.00 7.00 C ATOM 306 OG SER 22 -7.208 32.715 10.533 1.00 7.00 O ATOM 312 N LEU 23 -4.428 32.776 12.504 1.00 7.00 N ATOM 313 CA LEU 23 -3.869 31.852 13.471 1.00 7.00 C ATOM 314 C LEU 23 -2.746 32.594 14.177 1.00 7.00 C ATOM 315 O LEU 23 -2.626 32.566 15.419 1.00 7.00 O ATOM 316 CB LEU 23 -3.311 30.624 12.735 1.00 7.00 C ATOM 317 CG LEU 23 -4.337 29.800 11.893 1.00 7.00 C ATOM 318 CD1 LEU 23 -3.587 28.708 11.117 1.00 7.00 C ATOM 319 CD2 LEU 23 -5.408 29.187 12.808 1.00 7.00 C ATOM 331 N ALA 24 -1.962 33.313 13.354 1.00 7.00 N ATOM 332 CA ALA 24 -0.827 34.101 13.776 1.00 7.00 C ATOM 333 C ALA 24 -1.282 35.153 14.750 1.00 7.00 C ATOM 334 O ALA 24 -0.633 35.425 15.747 1.00 7.00 O ATOM 335 CB ALA 24 -0.176 34.752 12.576 1.00 7.00 C ATOM 341 N ALA 25 -2.477 35.670 14.550 1.00 7.00 N ATOM 342 CA ALA 25 -2.997 36.701 15.414 1.00 7.00 C ATOM 343 C ALA 25 -2.962 36.297 16.883 1.00 7.00 C ATOM 344 O ALA 25 -2.717 37.138 17.755 1.00 7.00 O ATOM 345 CB ALA 25 -4.432 36.992 15.029 1.00 7.00 C ATOM 351 N ASN 26 -3.190 35.020 17.194 1.00 7.00 N ATOM 352 CA ASN 26 -3.196 34.640 18.589 1.00 7.00 C ATOM 353 C ASN 26 -1.771 34.429 19.066 1.00 7.00 C ATOM 354 O ASN 26 -1.391 34.879 20.150 1.00 7.00 O ATOM 355 CB ASN 26 -4.022 33.397 18.762 1.00 7.00 C ATOM 356 CG ASN 26 -5.478 33.661 18.551 1.00 7.00 C ATOM 357 OD1 ASN 26 -6.001 34.757 18.794 1.00 7.00 O ATOM 358 ND2 ASN 26 -6.145 32.658 18.069 1.00 7.00 N ATOM 365 N GLU 27 -0.956 33.769 18.248 1.00 7.00 N ATOM 366 CA GLU 27 0.424 33.502 18.655 1.00 7.00 C ATOM 367 C GLU 27 1.175 34.801 18.933 1.00 7.00 C ATOM 368 O GLU 27 1.898 34.936 19.932 1.00 7.00 O ATOM 369 CB GLU 27 1.174 32.750 17.547 1.00 7.00 C ATOM 370 CG GLU 27 2.629 32.384 17.889 1.00 7.00 C ATOM 371 CD GLU 27 3.356 31.714 16.745 1.00 7.00 C ATOM 372 OE1 GLU 27 2.777 31.582 15.696 1.00 7.00 O ATOM 373 OE2 GLU 27 4.498 31.337 16.923 1.00 7.00 O ATOM 380 N LEU 28 1.014 35.727 17.997 1.00 7.00 N ATOM 381 CA LEU 28 1.688 36.997 17.986 1.00 7.00 C ATOM 382 C LEU 28 1.247 37.913 19.094 1.00 7.00 C ATOM 383 O LEU 28 2.084 38.580 19.709 1.00 7.00 O ATOM 384 CB LEU 28 1.376 37.660 16.660 1.00 7.00 C ATOM 385 CG LEU 28 1.909 36.991 15.433 1.00 7.00 C ATOM 386 CD1 LEU 28 1.298 37.640 14.282 1.00 7.00 C ATOM 387 CD2 LEU 28 3.325 37.115 15.368 1.00 7.00 C ATOM 399 N ARG 29 -0.064 37.979 19.372 1.00 7.00 N ATOM 400 CA ARG 29 -0.519 38.829 20.454 1.00 7.00 C ATOM 401 C ARG 29 0.038 38.356 21.780 1.00 7.00 C ATOM 402 O ARG 29 0.531 39.154 22.569 1.00 7.00 O ATOM 403 CB ARG 29 -2.031 38.879 20.547 1.00 7.00 C ATOM 404 CG ARG 29 -2.552 39.783 21.682 1.00 7.00 C ATOM 405 CD ARG 29 -4.040 39.820 21.746 1.00 7.00 C ATOM 406 NE ARG 29 -4.613 38.515 22.109 1.00 7.00 N ATOM 407 CZ ARG 29 -4.691 38.003 23.367 1.00 7.00 C ATOM 408 NH1 ARG 29 -4.237 38.681 24.405 1.00 7.00 N ATOM 409 NH2 ARG 29 -5.232 36.809 23.552 1.00 7.00 N ATOM 423 N VAL 30 -0.006 37.047 22.025 1.00 7.00 N ATOM 424 CA VAL 30 0.403 36.520 23.319 1.00 7.00 C ATOM 425 C VAL 30 1.844 36.843 23.673 1.00 7.00 C ATOM 426 O VAL 30 2.124 37.193 24.822 1.00 7.00 O ATOM 427 CB VAL 30 0.152 35.002 23.374 1.00 7.00 C ATOM 428 CG1 VAL 30 0.792 34.378 24.637 1.00 7.00 C ATOM 429 CG2 VAL 30 -1.367 34.768 23.394 1.00 7.00 C ATOM 439 N THR 31 2.762 36.731 22.722 1.00 7.00 N ATOM 440 CA THR 31 4.157 37.033 23.012 1.00 7.00 C ATOM 441 C THR 31 4.556 38.457 22.604 1.00 7.00 C ATOM 442 O THR 31 5.741 38.800 22.630 1.00 7.00 O ATOM 443 CB THR 31 5.099 36.046 22.309 1.00 7.00 C ATOM 444 OG1 THR 31 4.948 36.166 20.894 1.00 7.00 O ATOM 445 CG2 THR 31 4.735 34.625 22.723 1.00 7.00 C ATOM 453 N GLU 32 3.576 39.263 22.170 1.00 7.00 N ATOM 454 CA GLU 32 3.783 40.629 21.682 1.00 7.00 C ATOM 455 C GLU 32 4.891 40.735 20.632 1.00 7.00 C ATOM 456 O GLU 32 5.775 41.594 20.730 1.00 7.00 O ATOM 457 CB GLU 32 4.043 41.617 22.827 1.00 7.00 C ATOM 458 CG GLU 32 2.878 41.755 23.809 1.00 7.00 C ATOM 459 CD GLU 32 3.061 42.874 24.828 1.00 7.00 C ATOM 460 OE1 GLU 32 4.119 43.456 24.871 1.00 7.00 O ATOM 461 OE2 GLU 32 2.131 43.148 25.550 1.00 7.00 O ATOM 468 N ARG 33 4.852 39.864 19.631 1.00 7.00 N ATOM 469 CA ARG 33 5.865 39.885 18.583 1.00 7.00 C ATOM 470 C ARG 33 5.716 41.227 17.851 1.00 7.00 C ATOM 471 O ARG 33 4.592 41.742 17.767 1.00 7.00 O ATOM 472 CB ARG 33 5.694 38.709 17.617 1.00 7.00 C ATOM 473 CG ARG 33 6.921 38.413 16.672 1.00 7.00 C ATOM 474 CD ARG 33 6.776 37.187 15.827 1.00 7.00 C ATOM 475 NE ARG 33 6.659 35.950 16.637 1.00 7.00 N ATOM 476 CZ ARG 33 6.243 34.733 16.192 1.00 7.00 C ATOM 477 NH1 ARG 33 5.910 34.545 14.931 1.00 7.00 N ATOM 478 NH2 ARG 33 6.174 33.732 17.056 1.00 7.00 N ATOM 492 N PRO 34 6.795 41.870 17.351 1.00 7.00 N ATOM 493 CA PRO 34 6.690 43.101 16.605 1.00 7.00 C ATOM 494 C PRO 34 5.671 42.934 15.500 1.00 7.00 C ATOM 495 O PRO 34 5.637 41.929 14.799 1.00 7.00 O ATOM 496 CB PRO 34 8.117 43.300 16.089 1.00 7.00 C ATOM 497 CG PRO 34 8.978 42.661 17.173 1.00 7.00 C ATOM 498 CD PRO 34 8.196 41.440 17.620 1.00 7.00 C ATOM 506 N PHE 35 4.850 43.966 15.395 1.00 7.00 N ATOM 507 CA PHE 35 3.715 44.116 14.502 1.00 7.00 C ATOM 508 C PHE 35 2.667 42.993 14.674 1.00 7.00 C ATOM 509 O PHE 35 1.957 42.634 13.719 1.00 7.00 O ATOM 510 CB PHE 35 4.226 44.114 13.060 1.00 7.00 C ATOM 511 CG PHE 35 5.355 45.051 12.824 1.00 7.00 C ATOM 512 CD1 PHE 35 6.642 44.540 12.639 1.00 7.00 C ATOM 513 CD2 PHE 35 5.176 46.420 12.806 1.00 7.00 C ATOM 514 CE1 PHE 35 7.704 45.374 12.451 1.00 7.00 C ATOM 515 CE2 PHE 35 6.253 47.259 12.612 1.00 7.00 C ATOM 516 CZ PHE 35 7.516 46.730 12.438 1.00 7.00 C ATOM 526 N TRP 36 2.409 42.586 15.932 1.00 7.00 N ATOM 527 CA TRP 36 1.356 41.600 16.194 1.00 7.00 C ATOM 528 C TRP 36 -0.010 42.178 15.863 1.00 7.00 C ATOM 529 O TRP 36 -0.959 41.469 15.516 1.00 7.00 O ATOM 530 CB TRP 36 1.351 41.134 17.656 1.00 7.00 C ATOM 531 CG TRP 36 1.029 42.167 18.694 1.00 7.00 C ATOM 532 CD1 TRP 36 1.908 42.928 19.404 1.00 7.00 C ATOM 533 CD2 TRP 36 -0.290 42.544 19.156 1.00 7.00 C ATOM 534 NE1 TRP 36 1.226 43.746 20.276 1.00 7.00 N ATOM 535 CE2 TRP 36 -0.117 43.519 20.134 1.00 7.00 C ATOM 536 CE3 TRP 36 -1.588 42.133 18.823 1.00 7.00 C ATOM 537 CZ2 TRP 36 -1.188 44.094 20.783 1.00 7.00 C ATOM 538 CZ3 TRP 36 -2.655 42.716 19.464 1.00 7.00 C ATOM 539 CH2 TRP 36 -2.462 43.669 20.422 1.00 7.00 C ATOM 550 N ILE 37 -0.080 43.495 15.916 1.00 7.00 N ATOM 551 CA ILE 37 -1.270 44.301 15.710 1.00 7.00 C ATOM 552 C ILE 37 -1.878 44.162 14.320 1.00 7.00 C ATOM 553 O ILE 37 -3.029 44.537 14.106 1.00 7.00 O ATOM 554 CB ILE 37 -0.938 45.775 16.006 1.00 7.00 C ATOM 555 CG1 ILE 37 0.165 46.288 15.001 1.00 7.00 C ATOM 556 CG2 ILE 37 -0.481 45.888 17.464 1.00 7.00 C ATOM 557 CD1 ILE 37 0.441 47.769 15.040 1.00 7.00 C ATOM 569 N SER 38 -1.095 43.642 13.376 1.00 7.00 N ATOM 570 CA SER 38 -1.548 43.437 12.016 1.00 7.00 C ATOM 571 C SER 38 -1.383 41.971 11.620 1.00 7.00 C ATOM 572 O SER 38 -1.370 41.633 10.433 1.00 7.00 O ATOM 573 CB SER 38 -0.791 44.351 11.081 1.00 7.00 C ATOM 574 OG SER 38 0.592 44.117 11.138 1.00 7.00 O ATOM 580 N SER 39 -1.265 41.101 12.637 1.00 7.00 N ATOM 581 CA SER 39 -1.082 39.657 12.485 1.00 7.00 C ATOM 582 C SER 39 0.115 39.318 11.604 1.00 7.00 C ATOM 583 O SER 39 0.055 38.417 10.766 1.00 7.00 O ATOM 584 CB SER 39 -2.335 39.017 11.921 1.00 7.00 C ATOM 585 OG SER 39 -3.434 39.203 12.775 1.00 7.00 O ATOM 591 N PHE 40 1.221 40.028 11.826 1.00 7.00 N ATOM 592 CA PHE 40 2.457 39.867 11.089 1.00 7.00 C ATOM 593 C PHE 40 3.325 38.744 11.668 1.00 7.00 C ATOM 594 O PHE 40 3.675 38.789 12.840 1.00 7.00 O ATOM 595 CB PHE 40 3.175 41.185 11.213 1.00 7.00 C ATOM 596 CG PHE 40 4.322 41.319 10.445 1.00 7.00 C ATOM 597 CD1 PHE 40 4.190 41.597 9.154 1.00 7.00 C ATOM 598 CD2 PHE 40 5.542 41.197 10.977 1.00 7.00 C ATOM 599 CE1 PHE 40 5.258 41.741 8.368 1.00 7.00 C ATOM 600 CE2 PHE 40 6.615 41.344 10.191 1.00 7.00 C ATOM 601 CZ PHE 40 6.474 41.610 8.874 1.00 7.00 C ATOM 611 N ILE 41 3.661 37.721 10.877 1.00 7.00 N ATOM 612 CA ILE 41 4.418 36.583 11.427 1.00 7.00 C ATOM 613 C ILE 41 5.888 36.863 11.804 1.00 7.00 C ATOM 614 O ILE 41 6.382 36.349 12.814 1.00 7.00 O ATOM 615 CB ILE 41 4.285 35.304 10.562 1.00 7.00 C ATOM 616 CG1 ILE 41 2.809 34.819 10.663 1.00 7.00 C ATOM 617 CG2 ILE 41 5.250 34.207 11.057 1.00 7.00 C ATOM 618 CD1 ILE 41 2.397 33.687 9.714 1.00 7.00 C ATOM 630 N GLY 42 6.627 37.567 10.958 1.00 7.00 N ATOM 631 CA GLY 42 8.044 37.836 11.228 1.00 7.00 C ATOM 632 C GLY 42 8.216 39.105 12.060 1.00 7.00 C ATOM 633 O GLY 42 7.321 39.488 12.802 1.00 7.00 O ATOM 637 N ARG 43 9.383 39.762 11.970 1.00 7.00 N ATOM 638 CA ARG 43 9.595 40.981 12.771 1.00 7.00 C ATOM 639 C ARG 43 10.039 42.216 11.958 1.00 7.00 C ATOM 640 O ARG 43 10.385 43.243 12.536 1.00 7.00 O ATOM 641 CB ARG 43 10.608 40.723 13.874 1.00 7.00 C ATOM 642 CG ARG 43 12.013 40.370 13.400 1.00 7.00 C ATOM 643 CD ARG 43 12.915 40.056 14.533 1.00 7.00 C ATOM 644 NE ARG 43 14.258 39.721 14.073 1.00 7.00 N ATOM 645 CZ ARG 43 15.287 39.340 14.865 1.00 7.00 C ATOM 646 NH1 ARG 43 15.128 39.242 16.171 1.00 7.00 N ATOM 647 NH2 ARG 43 16.460 39.062 14.318 1.00 7.00 N ATOM 661 N SER 44 10.048 42.097 10.631 1.00 7.00 N ATOM 662 CA SER 44 10.435 43.185 9.726 1.00 7.00 C ATOM 663 C SER 44 9.316 44.181 9.463 1.00 7.00 C ATOM 664 O SER 44 8.150 43.839 9.485 1.00 7.00 O ATOM 665 CB SER 44 10.887 42.646 8.399 1.00 7.00 C ATOM 666 OG SER 44 11.098 43.705 7.504 1.00 7.00 O ATOM 672 N LYS 45 9.672 45.431 9.205 1.00 7.00 N ATOM 673 CA LYS 45 8.676 46.453 8.857 1.00 7.00 C ATOM 674 C LYS 45 8.360 46.502 7.352 1.00 7.00 C ATOM 675 O LYS 45 7.516 47.293 6.916 1.00 7.00 O ATOM 676 CB LYS 45 9.158 47.840 9.297 1.00 7.00 C ATOM 677 CG LYS 45 10.329 48.412 8.471 1.00 7.00 C ATOM 678 CD LYS 45 10.781 49.774 9.002 1.00 7.00 C ATOM 679 CE LYS 45 11.931 50.349 8.169 1.00 7.00 C ATOM 680 NZ LYS 45 12.404 51.665 8.701 1.00 7.00 N TER 3519 END