####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS086_4-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_4-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 35 3 - 37 4.73 9.39 LONGEST_CONTINUOUS_SEGMENT: 35 4 - 38 4.93 9.23 LCS_AVERAGE: 76.34 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 16 22 - 37 1.96 10.49 LCS_AVERAGE: 30.22 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 12 7 - 18 0.67 11.93 LONGEST_CONTINUOUS_SEGMENT: 12 19 - 30 0.72 8.98 LCS_AVERAGE: 20.09 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 3 4 34 2 3 3 5 5 6 9 9 11 14 14 15 16 20 23 25 30 31 35 37 LCS_GDT V 3 V 3 3 7 35 2 4 4 5 7 7 9 12 14 20 26 28 31 34 35 35 35 36 36 37 LCS_GDT Q 4 Q 4 5 7 35 2 4 5 5 8 9 11 16 18 24 26 28 31 33 35 35 35 36 36 37 LCS_GDT G 5 G 5 5 7 35 2 4 5 6 10 16 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT P 6 P 6 5 13 35 3 4 5 5 12 16 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT W 7 W 7 12 15 35 6 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT V 8 V 8 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT G 9 G 9 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT S 10 S 10 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT S 11 S 11 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT Y 12 Y 12 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT V 13 V 13 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT A 14 A 14 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT E 15 E 15 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT T 16 T 16 12 15 35 7 11 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT G 17 G 17 12 15 35 4 11 12 13 14 17 20 24 24 26 27 30 31 34 35 35 35 36 36 37 LCS_GDT Q 18 Q 18 12 15 35 3 3 12 13 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT N 19 N 19 12 15 35 9 11 12 12 14 16 19 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT W 20 W 20 12 15 35 9 11 12 12 16 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT A 21 A 21 12 15 35 9 11 12 12 14 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT S 22 S 22 12 16 35 9 11 12 13 16 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT L 23 L 23 12 16 35 9 11 12 12 16 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT A 24 A 24 12 16 35 9 11 12 12 16 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT A 25 A 25 12 16 35 9 11 12 12 16 16 20 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT N 26 N 26 12 16 35 9 11 12 12 16 16 19 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT E 27 E 27 12 16 35 9 11 12 12 16 16 19 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT L 28 L 28 12 16 35 8 11 12 12 16 16 19 24 24 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT R 29 R 29 12 16 35 6 11 12 12 16 16 17 20 23 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT V 30 V 30 12 16 35 6 10 12 12 16 16 17 20 23 26 27 30 32 34 35 35 35 36 36 37 LCS_GDT T 31 T 31 6 16 35 3 7 10 12 16 16 17 20 22 25 27 30 32 34 35 35 35 36 36 37 LCS_GDT E 32 E 32 6 16 35 3 6 6 6 11 12 15 17 22 25 27 30 32 34 35 35 35 36 36 37 LCS_GDT R 33 R 33 6 16 35 3 6 10 12 16 16 17 20 22 25 27 30 32 34 35 35 35 36 36 37 LCS_GDT P 34 P 34 6 16 35 3 6 7 9 16 16 17 20 21 25 27 30 32 34 35 35 35 36 36 37 LCS_GDT F 35 F 35 6 16 35 3 6 10 12 16 16 17 20 22 25 26 30 32 34 35 35 35 36 36 37 LCS_GDT W 36 W 36 6 16 35 4 7 10 12 16 16 17 20 21 25 26 27 32 34 35 35 35 36 36 37 LCS_GDT I 37 I 37 6 16 35 4 6 8 12 16 16 17 20 22 25 26 27 32 34 35 35 35 36 36 37 LCS_GDT S 38 S 38 6 9 35 4 5 6 7 10 13 15 19 21 24 25 27 29 30 32 35 35 36 36 37 LCS_GDT S 39 S 39 6 9 32 4 5 6 7 9 9 10 15 19 22 24 27 29 30 30 31 31 34 35 37 LCS_GDT F 40 F 40 6 9 32 4 5 6 7 9 9 10 14 18 21 24 27 29 30 30 31 31 33 35 37 LCS_GDT I 41 I 41 6 9 32 4 4 6 7 9 9 10 14 18 20 24 25 27 30 30 31 31 32 32 32 LCS_GDT G 42 G 42 4 9 31 3 4 4 7 9 9 9 13 13 15 18 21 24 26 30 31 31 32 32 32 LCS_GDT R 43 R 43 4 9 29 3 4 6 7 9 9 9 13 13 14 17 18 24 25 27 28 31 32 32 32 LCS_GDT S 44 S 44 3 9 14 0 3 4 5 9 9 9 10 10 12 13 18 20 23 24 26 28 30 31 32 LCS_GDT K 45 K 45 3 3 14 0 3 3 3 3 5 8 9 9 10 13 13 13 16 17 17 19 20 22 24 LCS_AVERAGE LCS_A: 42.22 ( 20.09 30.22 76.34 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 9 11 12 13 16 17 20 24 24 26 27 30 32 34 35 35 35 36 36 37 GDT PERCENT_AT 20.45 25.00 27.27 29.55 36.36 38.64 45.45 54.55 54.55 59.09 61.36 68.18 72.73 77.27 79.55 79.55 79.55 81.82 81.82 84.09 GDT RMS_LOCAL 0.39 0.53 0.67 0.97 1.67 1.97 2.62 3.00 3.00 3.28 3.52 4.04 4.41 4.62 4.73 4.73 4.73 5.01 5.01 5.52 GDT RMS_ALL_AT 9.27 9.11 11.93 11.86 10.53 11.83 10.95 10.56 10.56 10.18 9.97 9.64 9.38 9.33 9.39 9.39 9.39 9.23 9.23 8.91 # Checking swapping # possible swapping detected: E 15 E 15 # possible swapping detected: E 32 E 32 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 15.520 0 0.677 0.629 16.955 0.000 0.000 - LGA V 3 V 3 8.631 0 0.113 1.040 10.989 0.000 0.260 4.803 LGA Q 4 Q 4 7.667 0 0.687 0.947 12.141 0.000 0.000 11.601 LGA G 5 G 5 3.583 0 0.045 0.045 5.620 4.545 4.545 - LGA P 6 P 6 3.058 0 0.097 0.423 4.681 21.364 16.623 3.882 LGA W 7 W 7 3.461 0 0.425 1.206 14.594 22.727 6.494 14.594 LGA V 8 V 8 3.343 0 0.107 0.167 3.522 20.455 18.442 3.522 LGA G 9 G 9 2.717 0 0.018 0.018 3.060 33.636 33.636 - LGA S 10 S 10 2.435 0 0.089 0.603 3.125 41.818 39.394 1.693 LGA S 11 S 11 2.092 0 0.022 0.053 2.928 38.182 34.545 2.928 LGA Y 12 Y 12 2.106 0 0.115 1.111 7.560 41.364 19.394 7.560 LGA V 13 V 13 1.305 0 0.055 1.133 3.171 55.000 45.974 3.038 LGA A 14 A 14 2.228 0 0.030 0.031 3.676 31.818 35.636 - LGA E 15 E 15 3.858 0 0.039 1.120 5.309 11.364 10.909 3.220 LGA T 16 T 16 3.843 0 0.018 0.048 4.373 9.545 13.506 2.567 LGA G 17 G 17 3.791 0 0.715 0.715 3.791 18.636 18.636 - LGA Q 18 Q 18 3.619 0 0.029 1.291 9.536 15.000 6.667 8.727 LGA N 19 N 19 3.614 0 0.628 1.293 8.512 24.545 12.273 7.196 LGA W 20 W 20 3.378 0 0.033 0.885 11.017 28.636 9.870 11.017 LGA A 21 A 21 2.737 0 0.031 0.036 3.604 39.091 33.455 - LGA S 22 S 22 1.400 0 0.109 0.142 2.608 61.818 54.242 2.608 LGA L 23 L 23 1.830 0 0.082 0.089 3.563 47.727 35.682 3.563 LGA A 24 A 24 0.965 0 0.030 0.045 1.965 65.909 65.818 - LGA A 25 A 25 2.304 0 0.016 0.028 3.581 31.818 33.091 - LGA N 26 N 26 3.576 0 0.031 0.070 4.813 12.727 11.818 3.542 LGA E 27 E 27 3.593 0 0.076 0.913 4.293 11.364 17.576 2.388 LGA L 28 L 28 3.892 0 0.058 0.109 5.516 7.727 16.364 2.708 LGA R 29 R 29 6.575 0 0.092 1.563 8.786 0.000 0.000 5.167 LGA V 30 V 30 6.525 0 0.252 1.164 7.007 0.000 0.000 5.794 LGA T 31 T 31 9.574 0 0.710 0.676 13.746 0.000 0.000 13.746 LGA E 32 E 32 9.742 0 0.635 0.943 11.969 0.000 0.000 11.830 LGA R 33 R 33 10.656 0 0.089 1.511 13.793 0.000 0.000 13.793 LGA P 34 P 34 11.532 0 0.104 0.120 12.592 0.000 0.000 12.592 LGA F 35 F 35 11.210 0 0.190 0.902 11.700 0.000 0.000 7.855 LGA W 36 W 36 11.767 0 0.667 1.048 16.062 0.000 0.000 13.505 LGA I 37 I 37 11.598 0 0.027 0.305 14.048 0.000 0.000 9.973 LGA S 38 S 38 15.783 0 0.106 0.598 18.783 0.000 0.000 17.917 LGA S 39 S 39 18.096 0 0.109 0.129 19.758 0.000 0.000 16.598 LGA F 40 F 40 15.636 0 0.122 1.656 18.193 0.000 0.000 14.434 LGA I 41 I 41 19.665 0 0.567 0.582 23.752 0.000 0.000 19.569 LGA G 42 G 42 23.775 0 0.177 0.177 26.413 0.000 0.000 - LGA R 43 R 43 23.217 0 0.664 1.228 23.217 0.000 0.000 21.663 LGA S 44 S 44 22.234 0 0.678 0.624 25.188 0.000 0.000 20.419 LGA K 45 K 45 24.283 0 0.063 0.699 26.342 0.000 0.000 16.090 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.501 8.653 9.295 15.837 13.519 8.000 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 24 3.00 47.159 43.429 0.775 LGA_LOCAL RMSD: 2.997 Number of atoms: 24 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.557 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.501 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = 0.938725 * X + -0.127084 * Y + 0.320382 * Z + 17.991550 Y_new = -0.069106 * X + -0.980064 * Y + -0.186276 * Z + 12.281159 Z_new = 0.337668 * X + 0.152721 * Y + -0.928793 * Z + -2.348663 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -0.073484 -0.344438 2.978621 [DEG: -4.2103 -19.7349 170.6624 ] ZXZ: 1.044153 2.761939 1.146046 [DEG: 59.8256 158.2475 65.6636 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS086_4-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_4-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 24 3.00 43.429 8.50 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS086_4-D1 PFRMAT TS TARGET T0953s2 MODEL 4 PARENT N/A ATOM 20 N ALA 2 -1.691 38.757 3.708 1.00 7.00 N ATOM 21 CA ALA 2 -2.051 39.493 4.927 1.00 7.00 C ATOM 22 C ALA 2 -0.857 40.136 5.625 1.00 7.00 C ATOM 23 O ALA 2 -0.995 41.105 6.390 1.00 7.00 O ATOM 24 CB ALA 2 -2.653 38.544 5.915 1.00 7.00 C ATOM 30 N VAL 3 0.296 39.492 5.449 1.00 7.00 N ATOM 31 CA VAL 3 1.549 39.830 6.111 1.00 7.00 C ATOM 32 C VAL 3 2.380 40.906 5.426 1.00 7.00 C ATOM 33 O VAL 3 2.154 41.259 4.272 1.00 7.00 O ATOM 34 CB VAL 3 2.431 38.563 6.273 1.00 7.00 C ATOM 35 CG1 VAL 3 1.759 37.505 7.112 1.00 7.00 C ATOM 36 CG2 VAL 3 2.721 37.959 4.928 1.00 7.00 C ATOM 46 N GLN 4 3.405 41.378 6.149 1.00 7.00 N ATOM 47 CA GLN 4 4.351 42.411 5.709 1.00 7.00 C ATOM 48 C GLN 4 5.149 41.979 4.465 1.00 7.00 C ATOM 49 O GLN 4 5.744 42.806 3.773 1.00 7.00 O ATOM 50 CB GLN 4 5.320 42.780 6.849 1.00 7.00 C ATOM 51 CG GLN 4 4.646 43.344 8.143 1.00 7.00 C ATOM 52 CD GLN 4 4.173 42.231 9.143 1.00 7.00 C ATOM 53 OE1 GLN 4 3.903 41.107 8.701 1.00 7.00 O ATOM 54 NE2 GLN 4 4.049 42.560 10.438 1.00 7.00 N ATOM 63 N GLY 5 5.189 40.677 4.222 1.00 7.00 N ATOM 64 CA GLY 5 5.855 40.097 3.073 1.00 7.00 C ATOM 65 C GLY 5 5.902 38.570 3.189 1.00 7.00 C ATOM 66 O GLY 5 5.808 38.042 4.302 1.00 7.00 O ATOM 70 N PRO 6 6.151 37.841 2.076 1.00 7.00 N ATOM 71 CA PRO 6 6.250 36.385 1.977 1.00 7.00 C ATOM 72 C PRO 6 7.178 35.769 3.005 1.00 7.00 C ATOM 73 O PRO 6 6.942 34.652 3.462 1.00 7.00 O ATOM 74 CB PRO 6 6.800 36.187 0.564 1.00 7.00 C ATOM 75 CG PRO 6 6.294 37.370 -0.206 1.00 7.00 C ATOM 76 CD PRO 6 6.348 38.527 0.769 1.00 7.00 C ATOM 84 N TRP 7 8.225 36.517 3.379 1.00 7.00 N ATOM 85 CA TRP 7 9.212 36.097 4.361 1.00 7.00 C ATOM 86 C TRP 7 8.655 36.017 5.785 1.00 7.00 C ATOM 87 O TRP 7 9.161 35.254 6.614 1.00 7.00 O ATOM 88 CB TRP 7 10.391 37.068 4.292 1.00 7.00 C ATOM 89 CG TRP 7 10.016 38.496 4.608 1.00 7.00 C ATOM 90 CD1 TRP 7 9.627 39.447 3.708 1.00 7.00 C ATOM 91 CD2 TRP 7 10.025 39.151 5.895 1.00 7.00 C ATOM 92 NE1 TRP 7 9.377 40.626 4.345 1.00 7.00 N ATOM 93 CE2 TRP 7 9.613 40.470 5.680 1.00 7.00 C ATOM 94 CE3 TRP 7 10.345 38.736 7.194 1.00 7.00 C ATOM 95 CZ2 TRP 7 9.504 41.380 6.712 1.00 7.00 C ATOM 96 CZ3 TRP 7 10.241 39.649 8.229 1.00 7.00 C ATOM 97 CH2 TRP 7 9.828 40.938 7.994 1.00 7.00 C ATOM 108 N VAL 8 7.585 36.761 6.066 1.00 7.00 N ATOM 109 CA VAL 8 6.957 36.729 7.372 1.00 7.00 C ATOM 110 C VAL 8 6.105 35.512 7.362 1.00 7.00 C ATOM 111 O VAL 8 6.053 34.736 8.321 1.00 7.00 O ATOM 112 CB VAL 8 6.015 37.912 7.612 1.00 7.00 C ATOM 113 CG1 VAL 8 5.292 37.754 8.947 1.00 7.00 C ATOM 114 CG2 VAL 8 6.735 39.158 7.582 1.00 7.00 C ATOM 124 N GLY 9 5.364 35.400 6.269 1.00 7.00 N ATOM 125 CA GLY 9 4.420 34.325 6.103 1.00 7.00 C ATOM 126 C GLY 9 5.142 33.000 6.261 1.00 7.00 C ATOM 127 O GLY 9 4.793 32.199 7.135 1.00 7.00 O ATOM 131 N SER 10 6.187 32.813 5.443 1.00 7.00 N ATOM 132 CA SER 10 6.997 31.606 5.401 1.00 7.00 C ATOM 133 C SER 10 7.697 31.306 6.719 1.00 7.00 C ATOM 134 O SER 10 7.716 30.148 7.146 1.00 7.00 O ATOM 135 CB SER 10 8.031 31.718 4.298 1.00 7.00 C ATOM 136 OG SER 10 7.416 31.763 3.029 1.00 7.00 O ATOM 142 N SER 11 8.255 32.321 7.389 1.00 7.00 N ATOM 143 CA SER 11 8.915 32.074 8.660 1.00 7.00 C ATOM 144 C SER 11 7.928 31.549 9.700 1.00 7.00 C ATOM 145 O SER 11 8.201 30.553 10.381 1.00 7.00 O ATOM 146 CB SER 11 9.575 33.340 9.158 1.00 7.00 C ATOM 147 OG SER 11 10.212 33.129 10.388 1.00 7.00 O ATOM 153 N TYR 12 6.766 32.209 9.811 1.00 7.00 N ATOM 154 CA TYR 12 5.771 31.812 10.790 1.00 7.00 C ATOM 155 C TYR 12 5.365 30.368 10.599 1.00 7.00 C ATOM 156 O TYR 12 5.429 29.562 11.532 1.00 7.00 O ATOM 157 CB TYR 12 4.530 32.700 10.671 1.00 7.00 C ATOM 158 CG TYR 12 3.409 32.328 11.627 1.00 7.00 C ATOM 159 CD1 TYR 12 3.453 32.763 12.933 1.00 7.00 C ATOM 160 CD2 TYR 12 2.349 31.546 11.200 1.00 7.00 C ATOM 161 CE1 TYR 12 2.458 32.430 13.804 1.00 7.00 C ATOM 162 CE2 TYR 12 1.354 31.202 12.077 1.00 7.00 C ATOM 163 CZ TYR 12 1.409 31.642 13.382 1.00 7.00 C ATOM 164 OH TYR 12 0.430 31.279 14.280 1.00 7.00 O ATOM 174 N VAL 13 4.979 30.019 9.381 1.00 7.00 N ATOM 175 CA VAL 13 4.506 28.664 9.132 1.00 7.00 C ATOM 176 C VAL 13 5.611 27.626 9.298 1.00 7.00 C ATOM 177 O VAL 13 5.367 26.535 9.815 1.00 7.00 O ATOM 178 CB VAL 13 3.851 28.572 7.754 1.00 7.00 C ATOM 179 CG1 VAL 13 2.683 29.489 7.703 1.00 7.00 C ATOM 180 CG2 VAL 13 4.836 28.959 6.693 1.00 7.00 C ATOM 190 N ALA 14 6.858 27.970 8.957 1.00 7.00 N ATOM 191 CA ALA 14 7.944 27.030 9.141 1.00 7.00 C ATOM 192 C ALA 14 8.059 26.612 10.606 1.00 7.00 C ATOM 193 O ALA 14 8.382 25.456 10.897 1.00 7.00 O ATOM 194 CB ALA 14 9.250 27.646 8.678 1.00 7.00 C ATOM 200 N GLU 15 7.800 27.544 11.534 1.00 7.00 N ATOM 201 CA GLU 15 7.871 27.220 12.953 1.00 7.00 C ATOM 202 C GLU 15 6.563 26.680 13.566 1.00 7.00 C ATOM 203 O GLU 15 6.618 25.840 14.469 1.00 7.00 O ATOM 204 CB GLU 15 8.331 28.431 13.773 1.00 7.00 C ATOM 205 CG GLU 15 9.776 28.867 13.519 1.00 7.00 C ATOM 206 CD GLU 15 10.219 30.010 14.417 1.00 7.00 C ATOM 207 OE1 GLU 15 9.393 30.537 15.127 1.00 7.00 O ATOM 208 OE2 GLU 15 11.386 30.331 14.410 1.00 7.00 O ATOM 215 N THR 16 5.390 27.139 13.095 1.00 7.00 N ATOM 216 CA THR 16 4.130 26.739 13.736 1.00 7.00 C ATOM 217 C THR 16 3.239 25.782 12.963 1.00 7.00 C ATOM 218 O THR 16 2.360 25.151 13.557 1.00 7.00 O ATOM 219 CB THR 16 3.217 27.952 13.942 1.00 7.00 C ATOM 220 OG1 THR 16 2.821 28.471 12.644 1.00 7.00 O ATOM 221 CG2 THR 16 3.974 29.038 14.693 1.00 7.00 C ATOM 229 N GLY 17 3.411 25.698 11.656 1.00 7.00 N ATOM 230 CA GLY 17 2.505 24.941 10.831 1.00 7.00 C ATOM 231 C GLY 17 1.179 25.689 10.776 1.00 7.00 C ATOM 232 O GLY 17 1.098 26.872 11.142 1.00 7.00 O ATOM 236 N GLN 18 0.144 24.993 10.323 1.00 7.00 N ATOM 237 CA GLN 18 -1.194 25.552 10.183 1.00 7.00 C ATOM 238 C GLN 18 -1.803 25.977 11.509 1.00 7.00 C ATOM 239 O GLN 18 -1.640 25.306 12.526 1.00 7.00 O ATOM 240 CB GLN 18 -2.044 24.546 9.401 1.00 7.00 C ATOM 241 CG GLN 18 -2.309 23.225 10.109 1.00 7.00 C ATOM 242 CD GLN 18 -2.891 22.184 9.141 1.00 7.00 C ATOM 243 OE1 GLN 18 -2.245 21.902 8.105 1.00 7.00 O ATOM 244 NE2 GLN 18 -4.058 21.621 9.437 1.00 7.00 N ATOM 253 N ASN 19 -2.553 27.079 11.462 1.00 7.00 N ATOM 254 CA ASN 19 -3.223 27.670 12.614 1.00 7.00 C ATOM 255 C ASN 19 -4.477 28.392 12.143 1.00 7.00 C ATOM 256 O ASN 19 -4.777 28.406 10.951 1.00 7.00 O ATOM 257 CB ASN 19 -2.275 28.651 13.311 1.00 7.00 C ATOM 258 CG ASN 19 -2.531 28.857 14.807 1.00 7.00 C ATOM 259 OD1 ASN 19 -3.677 28.751 15.267 1.00 7.00 O ATOM 260 ND2 ASN 19 -1.490 29.158 15.546 1.00 7.00 N ATOM 267 N TRP 20 -5.209 28.982 13.068 1.00 7.00 N ATOM 268 CA TRP 20 -6.401 29.748 12.744 1.00 7.00 C ATOM 269 C TRP 20 -5.963 31.071 12.163 1.00 7.00 C ATOM 270 O TRP 20 -5.089 31.734 12.724 1.00 7.00 O ATOM 271 CB TRP 20 -7.213 29.989 14.003 1.00 7.00 C ATOM 272 CG TRP 20 -7.818 28.767 14.556 1.00 7.00 C ATOM 273 CD1 TRP 20 -7.661 27.507 14.096 1.00 7.00 C ATOM 274 CD2 TRP 20 -8.684 28.661 15.693 1.00 7.00 C ATOM 275 NE1 TRP 20 -8.376 26.637 14.847 1.00 7.00 N ATOM 276 CE2 TRP 20 -8.995 27.315 15.837 1.00 7.00 C ATOM 277 CE3 TRP 20 -9.213 29.583 16.590 1.00 7.00 C ATOM 278 CZ2 TRP 20 -9.798 26.862 16.837 1.00 7.00 C ATOM 279 CZ3 TRP 20 -10.021 29.122 17.604 1.00 7.00 C ATOM 280 CH2 TRP 20 -10.305 27.798 17.727 1.00 7.00 C ATOM 291 N ALA 21 -6.635 31.546 11.122 1.00 7.00 N ATOM 292 CA ALA 21 -6.210 32.799 10.503 1.00 7.00 C ATOM 293 C ALA 21 -6.173 33.954 11.475 1.00 7.00 C ATOM 294 O ALA 21 -5.263 34.779 11.409 1.00 7.00 O ATOM 295 CB ALA 21 -7.137 33.161 9.363 1.00 7.00 C ATOM 301 N SER 22 -7.141 34.018 12.389 1.00 7.00 N ATOM 302 CA SER 22 -7.212 35.116 13.335 1.00 7.00 C ATOM 303 C SER 22 -6.225 35.016 14.493 1.00 7.00 C ATOM 304 O SER 22 -5.899 36.029 15.119 1.00 7.00 O ATOM 305 CB SER 22 -8.615 35.198 13.895 1.00 7.00 C ATOM 306 OG SER 22 -8.906 34.072 14.684 1.00 7.00 O ATOM 312 N LEU 23 -5.693 33.828 14.774 1.00 7.00 N ATOM 313 CA LEU 23 -4.770 33.742 15.884 1.00 7.00 C ATOM 314 C LEU 23 -3.418 34.069 15.327 1.00 7.00 C ATOM 315 O LEU 23 -2.653 34.830 15.924 1.00 7.00 O ATOM 316 CB LEU 23 -4.765 32.346 16.525 1.00 7.00 C ATOM 317 CG LEU 23 -6.097 31.868 17.198 1.00 7.00 C ATOM 318 CD1 LEU 23 -5.917 30.418 17.670 1.00 7.00 C ATOM 319 CD2 LEU 23 -6.465 32.764 18.372 1.00 7.00 C ATOM 331 N ALA 24 -3.144 33.517 14.147 1.00 7.00 N ATOM 332 CA ALA 24 -1.879 33.744 13.504 1.00 7.00 C ATOM 333 C ALA 24 -1.737 35.232 13.198 1.00 7.00 C ATOM 334 O ALA 24 -0.671 35.824 13.415 1.00 7.00 O ATOM 335 CB ALA 24 -1.815 32.898 12.252 1.00 7.00 C ATOM 341 N ALA 25 -2.844 35.846 12.751 1.00 7.00 N ATOM 342 CA ALA 25 -2.883 37.254 12.438 1.00 7.00 C ATOM 343 C ALA 25 -2.603 38.117 13.639 1.00 7.00 C ATOM 344 O ALA 25 -1.836 39.085 13.562 1.00 7.00 O ATOM 345 CB ALA 25 -4.229 37.614 11.880 1.00 7.00 C ATOM 351 N ASN 26 -3.162 37.768 14.795 1.00 7.00 N ATOM 352 CA ASN 26 -2.878 38.598 15.940 1.00 7.00 C ATOM 353 C ASN 26 -1.414 38.487 16.355 1.00 7.00 C ATOM 354 O ASN 26 -0.761 39.500 16.616 1.00 7.00 O ATOM 355 CB ASN 26 -3.789 38.227 17.086 1.00 7.00 C ATOM 356 CG ASN 26 -5.203 38.682 16.860 1.00 7.00 C ATOM 357 OD1 ASN 26 -5.477 39.574 16.047 1.00 7.00 O ATOM 358 ND2 ASN 26 -6.117 38.084 17.574 1.00 7.00 N ATOM 365 N GLU 27 -0.864 37.272 16.333 1.00 7.00 N ATOM 366 CA GLU 27 0.512 37.037 16.773 1.00 7.00 C ATOM 367 C GLU 27 1.544 37.816 15.958 1.00 7.00 C ATOM 368 O GLU 27 2.499 38.369 16.506 1.00 7.00 O ATOM 369 CB GLU 27 0.810 35.535 16.697 1.00 7.00 C ATOM 370 CG GLU 27 0.074 34.686 17.751 1.00 7.00 C ATOM 371 CD GLU 27 0.149 33.201 17.475 1.00 7.00 C ATOM 372 OE1 GLU 27 0.669 32.846 16.441 1.00 7.00 O ATOM 373 OE2 GLU 27 -0.319 32.434 18.286 1.00 7.00 O ATOM 380 N LEU 28 1.324 37.890 14.650 1.00 7.00 N ATOM 381 CA LEU 28 2.216 38.587 13.730 1.00 7.00 C ATOM 382 C LEU 28 1.894 40.059 13.466 1.00 7.00 C ATOM 383 O LEU 28 2.620 40.708 12.698 1.00 7.00 O ATOM 384 CB LEU 28 2.172 37.873 12.384 1.00 7.00 C ATOM 385 CG LEU 28 2.678 36.453 12.292 1.00 7.00 C ATOM 386 CD1 LEU 28 2.338 35.968 10.905 1.00 7.00 C ATOM 387 CD2 LEU 28 4.191 36.413 12.540 1.00 7.00 C ATOM 399 N ARG 29 0.818 40.583 14.075 1.00 7.00 N ATOM 400 CA ARG 29 0.325 41.940 13.814 1.00 7.00 C ATOM 401 C ARG 29 -0.011 42.151 12.324 1.00 7.00 C ATOM 402 O ARG 29 0.414 43.141 11.719 1.00 7.00 O ATOM 403 CB ARG 29 1.357 42.978 14.251 1.00 7.00 C ATOM 404 CG ARG 29 1.719 42.917 15.721 1.00 7.00 C ATOM 405 CD ARG 29 2.674 43.968 16.110 1.00 7.00 C ATOM 406 NE ARG 29 3.038 43.853 17.518 1.00 7.00 N ATOM 407 CZ ARG 29 3.939 44.629 18.160 1.00 7.00 C ATOM 408 NH1 ARG 29 4.572 45.590 17.517 1.00 7.00 N ATOM 409 NH2 ARG 29 4.185 44.419 19.444 1.00 7.00 N ATOM 423 N VAL 30 -0.764 41.206 11.739 1.00 7.00 N ATOM 424 CA VAL 30 -1.146 41.219 10.314 1.00 7.00 C ATOM 425 C VAL 30 -2.657 41.026 10.155 1.00 7.00 C ATOM 426 O VAL 30 -3.356 40.869 11.154 1.00 7.00 O ATOM 427 CB VAL 30 -0.360 40.138 9.557 1.00 7.00 C ATOM 428 CG1 VAL 30 1.102 40.425 9.711 1.00 7.00 C ATOM 429 CG2 VAL 30 -0.694 38.824 10.044 1.00 7.00 C ATOM 439 N THR 31 -3.185 41.098 8.927 1.00 7.00 N ATOM 440 CA THR 31 -4.632 40.871 8.781 1.00 7.00 C ATOM 441 C THR 31 -4.866 39.363 8.810 1.00 7.00 C ATOM 442 O THR 31 -3.920 38.574 8.839 1.00 7.00 O ATOM 443 CB THR 31 -5.242 41.385 7.453 1.00 7.00 C ATOM 444 OG1 THR 31 -4.798 40.553 6.392 1.00 7.00 O ATOM 445 CG2 THR 31 -4.761 42.799 7.192 1.00 7.00 C ATOM 453 N GLU 32 -6.128 38.952 8.851 1.00 7.00 N ATOM 454 CA GLU 32 -6.490 37.534 8.808 1.00 7.00 C ATOM 455 C GLU 32 -6.512 37.017 7.368 1.00 7.00 C ATOM 456 O GLU 32 -6.804 35.844 7.119 1.00 7.00 O ATOM 457 CB GLU 32 -7.857 37.297 9.476 1.00 7.00 C ATOM 458 CG GLU 32 -9.101 37.745 8.651 1.00 7.00 C ATOM 459 CD GLU 32 -9.408 39.218 8.753 1.00 7.00 C ATOM 460 OE1 GLU 32 -8.535 39.962 9.165 1.00 7.00 O ATOM 461 OE2 GLU 32 -10.512 39.608 8.424 1.00 7.00 O ATOM 468 N ARG 33 -6.327 37.923 6.404 1.00 7.00 N ATOM 469 CA ARG 33 -6.438 37.535 5.017 1.00 7.00 C ATOM 470 C ARG 33 -5.713 38.446 3.999 1.00 7.00 C ATOM 471 O ARG 33 -5.597 39.663 4.205 1.00 7.00 O ATOM 472 CB ARG 33 -7.908 37.466 4.658 1.00 7.00 C ATOM 473 CG ARG 33 -8.655 38.779 4.759 1.00 7.00 C ATOM 474 CD ARG 33 -10.054 38.571 4.447 1.00 7.00 C ATOM 475 NE ARG 33 -10.879 39.773 4.610 1.00 7.00 N ATOM 476 CZ ARG 33 -11.089 40.731 3.676 1.00 7.00 C ATOM 477 NH1 ARG 33 -10.517 40.661 2.489 1.00 7.00 N ATOM 478 NH2 ARG 33 -11.887 41.749 3.960 1.00 7.00 N ATOM 492 N PRO 34 -5.241 37.866 2.873 1.00 7.00 N ATOM 493 CA PRO 34 -5.135 36.447 2.495 1.00 7.00 C ATOM 494 C PRO 34 -4.280 35.661 3.491 1.00 7.00 C ATOM 495 O PRO 34 -3.239 36.148 3.949 1.00 7.00 O ATOM 496 CB PRO 34 -4.468 36.521 1.118 1.00 7.00 C ATOM 497 CG PRO 34 -4.841 37.896 0.595 1.00 7.00 C ATOM 498 CD PRO 34 -4.850 38.787 1.816 1.00 7.00 C ATOM 506 N PHE 35 -4.714 34.447 3.817 1.00 7.00 N ATOM 507 CA PHE 35 -3.988 33.662 4.798 1.00 7.00 C ATOM 508 C PHE 35 -2.893 32.858 4.108 1.00 7.00 C ATOM 509 O PHE 35 -3.152 31.902 3.369 1.00 7.00 O ATOM 510 CB PHE 35 -4.978 32.800 5.608 1.00 7.00 C ATOM 511 CG PHE 35 -4.424 32.038 6.836 1.00 7.00 C ATOM 512 CD1 PHE 35 -3.287 32.444 7.531 1.00 7.00 C ATOM 513 CD2 PHE 35 -5.100 30.932 7.319 1.00 7.00 C ATOM 514 CE1 PHE 35 -2.841 31.765 8.636 1.00 7.00 C ATOM 515 CE2 PHE 35 -4.649 30.261 8.431 1.00 7.00 C ATOM 516 CZ PHE 35 -3.515 30.680 9.086 1.00 7.00 C ATOM 526 N TRP 36 -1.666 33.259 4.405 1.00 7.00 N ATOM 527 CA TRP 36 -0.389 32.812 3.851 1.00 7.00 C ATOM 528 C TRP 36 -0.105 31.323 4.019 1.00 7.00 C ATOM 529 O TRP 36 0.748 30.747 3.324 1.00 7.00 O ATOM 530 CB TRP 36 0.684 33.672 4.509 1.00 7.00 C ATOM 531 CG TRP 36 0.720 33.561 5.996 1.00 7.00 C ATOM 532 CD1 TRP 36 1.459 32.706 6.721 1.00 7.00 C ATOM 533 CD2 TRP 36 -0.061 34.312 6.965 1.00 7.00 C ATOM 534 NE1 TRP 36 1.225 32.901 8.053 1.00 7.00 N ATOM 535 CE2 TRP 36 0.307 33.859 8.210 1.00 7.00 C ATOM 536 CE3 TRP 36 -1.030 35.319 6.873 1.00 7.00 C ATOM 537 CZ2 TRP 36 -0.227 34.360 9.341 1.00 7.00 C ATOM 538 CZ3 TRP 36 -1.589 35.811 8.052 1.00 7.00 C ATOM 539 CH2 TRP 36 -1.189 35.340 9.244 1.00 7.00 C ATOM 550 N ILE 37 -0.885 30.680 4.877 1.00 7.00 N ATOM 551 CA ILE 37 -0.777 29.254 5.095 1.00 7.00 C ATOM 552 C ILE 37 -1.082 28.531 3.787 1.00 7.00 C ATOM 553 O ILE 37 -0.717 27.370 3.618 1.00 7.00 O ATOM 554 CB ILE 37 -1.724 28.758 6.207 1.00 7.00 C ATOM 555 CG1 ILE 37 -1.306 27.354 6.720 1.00 7.00 C ATOM 556 CG2 ILE 37 -3.160 28.666 5.677 1.00 7.00 C ATOM 557 CD1 ILE 37 0.040 27.281 7.414 1.00 7.00 C ATOM 569 N SER 38 -1.803 29.197 2.883 1.00 7.00 N ATOM 570 CA SER 38 -2.144 28.641 1.599 1.00 7.00 C ATOM 571 C SER 38 -0.902 28.258 0.799 1.00 7.00 C ATOM 572 O SER 38 -0.897 27.200 0.154 1.00 7.00 O ATOM 573 CB SER 38 -2.967 29.638 0.816 1.00 7.00 C ATOM 574 OG SER 38 -3.317 29.129 -0.441 1.00 7.00 O ATOM 580 N SER 39 0.153 29.106 0.808 1.00 7.00 N ATOM 581 CA SER 39 1.341 28.781 0.024 1.00 7.00 C ATOM 582 C SER 39 2.180 27.758 0.775 1.00 7.00 C ATOM 583 O SER 39 2.879 26.938 0.167 1.00 7.00 O ATOM 584 CB SER 39 2.159 30.026 -0.263 1.00 7.00 C ATOM 585 OG SER 39 2.709 30.554 0.907 1.00 7.00 O ATOM 591 N PHE 40 2.068 27.752 2.103 1.00 7.00 N ATOM 592 CA PHE 40 2.761 26.757 2.912 1.00 7.00 C ATOM 593 C PHE 40 2.263 25.376 2.536 1.00 7.00 C ATOM 594 O PHE 40 3.049 24.464 2.236 1.00 7.00 O ATOM 595 CB PHE 40 2.510 26.991 4.385 1.00 7.00 C ATOM 596 CG PHE 40 3.112 25.989 5.321 1.00 7.00 C ATOM 597 CD1 PHE 40 4.474 25.945 5.549 1.00 7.00 C ATOM 598 CD2 PHE 40 2.301 25.124 6.029 1.00 7.00 C ATOM 599 CE1 PHE 40 5.006 25.070 6.459 1.00 7.00 C ATOM 600 CE2 PHE 40 2.826 24.249 6.935 1.00 7.00 C ATOM 601 CZ PHE 40 4.185 24.224 7.154 1.00 7.00 C ATOM 611 N ILE 41 0.938 25.234 2.565 1.00 7.00 N ATOM 612 CA ILE 41 0.295 23.983 2.256 1.00 7.00 C ATOM 613 C ILE 41 0.481 23.627 0.800 1.00 7.00 C ATOM 614 O ILE 41 0.929 22.525 0.497 1.00 7.00 O ATOM 615 CB ILE 41 -1.200 24.022 2.621 1.00 7.00 C ATOM 616 CG1 ILE 41 -1.316 24.124 4.167 1.00 7.00 C ATOM 617 CG2 ILE 41 -1.927 22.755 2.066 1.00 7.00 C ATOM 618 CD1 ILE 41 -2.691 24.471 4.689 1.00 7.00 C ATOM 630 N GLY 42 0.223 24.556 -0.127 1.00 7.00 N ATOM 631 CA GLY 42 0.364 24.211 -1.534 1.00 7.00 C ATOM 632 C GLY 42 1.749 23.657 -1.866 1.00 7.00 C ATOM 633 O GLY 42 1.874 22.725 -2.664 1.00 7.00 O ATOM 637 N ARG 43 2.794 24.191 -1.227 1.00 7.00 N ATOM 638 CA ARG 43 4.138 23.705 -1.469 1.00 7.00 C ATOM 639 C ARG 43 4.509 22.459 -0.645 1.00 7.00 C ATOM 640 O ARG 43 5.393 21.698 -1.051 1.00 7.00 O ATOM 641 CB ARG 43 5.133 24.813 -1.162 1.00 7.00 C ATOM 642 CG ARG 43 5.052 26.017 -2.103 1.00 7.00 C ATOM 643 CD ARG 43 5.966 27.126 -1.699 1.00 7.00 C ATOM 644 NE ARG 43 5.559 27.771 -0.429 1.00 7.00 N ATOM 645 CZ ARG 43 6.286 28.733 0.214 1.00 7.00 C ATOM 646 NH1 ARG 43 7.431 29.142 -0.309 1.00 7.00 N ATOM 647 NH2 ARG 43 5.861 29.270 1.361 1.00 7.00 N ATOM 661 N SER 44 3.847 22.236 0.500 1.00 7.00 N ATOM 662 CA SER 44 4.195 21.126 1.384 1.00 7.00 C ATOM 663 C SER 44 3.384 19.834 1.214 1.00 7.00 C ATOM 664 O SER 44 3.916 18.744 1.447 1.00 7.00 O ATOM 665 CB SER 44 4.027 21.573 2.825 1.00 7.00 C ATOM 666 OG SER 44 4.892 22.628 3.129 1.00 7.00 O ATOM 672 N LYS 45 2.107 19.928 0.834 1.00 7.00 N ATOM 673 CA LYS 45 1.269 18.732 0.760 1.00 7.00 C ATOM 674 C LYS 45 0.032 18.850 -0.129 1.00 7.00 C ATOM 675 O LYS 45 -0.539 19.922 -0.307 1.00 7.00 O ATOM 676 CB LYS 45 0.843 18.335 2.178 1.00 7.00 C ATOM 677 CG LYS 45 0.027 19.404 2.905 1.00 7.00 C ATOM 678 CD LYS 45 -0.311 18.982 4.338 1.00 7.00 C ATOM 679 CE LYS 45 -1.036 20.100 5.102 1.00 7.00 C ATOM 680 NZ LYS 45 -1.383 19.693 6.503 1.00 7.00 N TER 3519 END