####################################################### # # # LGA # # --------------- # # # # Local-Global Alignment # # A Method for Finding 3-D Similarities # # in Protein Structures # # # # ------------ 09/2011 # # # # Adam Zemla (adamz@llnl.gov) # # Lawrence Livermore National Laboratory, CA # # # ####################################################### # Molecule1: number of CA atoms 44 ( 344), selected 44 , name T0953s2TS086_3-D1 # Molecule2: number of CA atoms 44 ( 344), selected 44 , name T0953s2-D1.pdb # PARAMETERS: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_3-D1.lga # FIXED Atom-Atom correspondence # GDT and LCS analysis LCS - RMSD CUTOFF 5.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 24 17 - 40 4.72 9.12 LONGEST_CONTINUOUS_SEGMENT: 24 18 - 41 4.82 8.98 LCS_AVERAGE: 49.07 LCS - RMSD CUTOFF 2.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 11 20 - 30 1.29 9.96 LCS_AVERAGE: 15.55 LCS - RMSD CUTOFF 1.00 length segment l_RMS g_RMS LONGEST_CONTINUOUS_SEGMENT: 8 20 - 27 0.30 10.19 LCS_AVERAGE: 10.64 LCS_GDT MOLECULE-1 MOLECULE-2 LCS_DETAILS GDT_DETAILS TOTAL NUMBER OF RESIDUE PAIRS: 44 LCS_GDT RESIDUE RESIDUE SEGMENT_SIZE GLOBAL DISTANCE TEST COLUMNS: number of residues under the threshold assigned to each residue pair LCS_GDT NAME NUMBER NAME NUMBER 1.0 2.0 5.0 0.5 1.0 1.5 2.0 2.5 3.0 3.5 4.0 4.5 5.0 5.5 6.0 6.5 7.0 7.5 8.0 8.5 9.0 9.5 10.0 LCS_GDT A 2 A 2 5 5 20 0 4 5 6 7 9 9 10 13 15 19 25 26 30 31 32 32 34 34 35 LCS_GDT V 3 V 3 5 5 20 3 4 5 6 7 10 12 14 18 21 24 26 28 30 31 32 32 34 34 35 LCS_GDT Q 4 Q 4 5 5 20 3 4 5 6 7 9 12 15 18 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT G 5 G 5 5 5 20 3 4 5 6 6 9 9 10 13 13 17 18 24 28 30 31 32 32 34 35 LCS_GDT P 6 P 6 5 5 20 3 4 5 6 7 9 9 10 13 14 16 19 23 28 29 30 31 32 34 35 LCS_GDT W 7 W 7 4 5 20 3 4 4 4 5 9 9 10 13 14 15 18 19 20 21 23 27 28 33 34 LCS_GDT V 8 V 8 4 5 20 3 4 4 4 5 5 7 10 10 14 15 22 23 26 29 30 31 32 33 35 LCS_GDT G 9 G 9 3 5 20 3 3 3 5 7 9 14 16 18 19 20 22 23 26 27 30 31 31 33 35 LCS_GDT S 10 S 10 3 4 20 3 3 3 5 7 9 9 15 18 19 21 22 24 26 28 30 31 32 34 35 LCS_GDT S 11 S 11 3 4 20 0 3 4 9 11 13 18 19 20 22 24 26 28 29 31 32 32 34 34 35 LCS_GDT Y 12 Y 12 4 4 20 3 3 4 4 9 13 16 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT V 13 V 13 4 5 20 3 3 4 4 5 7 9 17 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT A 14 A 14 4 5 20 3 4 4 4 7 8 12 14 18 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT E 15 E 15 4 5 20 3 4 4 5 5 7 9 11 15 17 18 25 26 30 31 32 32 34 34 35 LCS_GDT T 16 T 16 4 6 22 3 4 4 4 5 7 9 10 12 14 17 18 21 23 27 29 30 31 34 35 LCS_GDT G 17 G 17 4 6 24 3 4 4 5 5 8 9 11 15 17 23 26 27 30 31 32 32 34 34 35 LCS_GDT Q 18 Q 18 4 6 24 3 3 4 5 6 8 9 15 18 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT N 19 N 19 4 9 24 3 3 6 9 11 13 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT W 20 W 20 8 11 24 8 9 10 10 13 16 18 19 20 22 23 26 28 30 31 32 32 34 34 35 LCS_GDT A 21 A 21 8 11 24 8 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT S 22 S 22 8 11 24 8 9 10 10 11 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT L 23 L 23 8 11 24 8 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT A 24 A 24 8 11 24 8 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT A 25 A 25 8 11 24 8 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT N 26 N 26 8 11 24 8 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT E 27 E 27 8 11 24 8 9 10 10 12 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT L 28 L 28 3 11 24 3 4 5 8 13 16 17 19 20 22 23 24 26 29 30 31 32 34 34 35 LCS_GDT R 29 R 29 4 11 24 0 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT V 30 V 30 4 11 24 3 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT T 31 T 31 4 8 24 4 4 6 7 12 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT E 32 E 32 4 8 24 2 4 5 9 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT R 33 R 33 3 8 24 2 4 6 7 12 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT P 34 P 34 3 4 24 2 3 3 7 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT F 35 F 35 3 4 24 3 3 6 7 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT W 36 W 36 4 4 24 3 4 4 7 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT I 37 I 37 4 4 24 3 4 4 4 6 11 15 19 20 22 24 26 28 30 31 32 32 34 34 35 LCS_GDT S 38 S 38 4 5 24 3 4 4 6 6 6 7 11 14 20 23 24 28 29 31 32 32 34 34 35 LCS_GDT S 39 S 39 4 5 24 3 4 4 4 6 6 8 13 18 21 24 26 28 30 31 32 32 34 34 35 LCS_GDT F 40 F 40 4 6 24 3 3 4 5 7 8 11 14 17 18 21 25 28 30 31 32 32 34 34 35 LCS_GDT I 41 I 41 4 6 24 1 3 4 5 5 8 11 14 17 18 20 25 26 30 31 32 32 34 34 35 LCS_GDT G 42 G 42 4 6 13 4 4 4 5 6 7 9 10 12 13 16 18 22 23 27 29 32 34 34 35 LCS_GDT R 43 R 43 4 6 13 4 4 4 5 6 7 8 9 12 13 13 15 16 19 21 22 25 29 32 34 LCS_GDT S 44 S 44 4 6 11 4 4 4 5 6 7 8 9 12 13 13 15 16 17 21 21 23 24 24 25 LCS_GDT K 45 K 45 4 6 11 4 4 4 5 6 7 8 9 12 13 13 14 16 17 21 21 23 24 24 24 LCS_AVERAGE LCS_A: 25.09 ( 10.64 15.55 49.07 ) GLOBAL_DISTANCE_TEST (summary information about detected largest sets of residues (represented by selected AToms) that can fit under specified thresholds) GDT DIST_CUTOFF 0.50 1.00 1.50 2.00 2.50 3.00 3.50 4.00 4.50 5.00 5.50 6.00 6.50 7.00 7.50 8.00 8.50 9.00 9.50 10.00 GDT NUMBER_AT 8 9 10 10 13 16 18 19 20 22 24 26 28 30 31 32 32 34 34 35 GDT PERCENT_AT 18.18 20.45 22.73 22.73 29.55 36.36 40.91 43.18 45.45 50.00 54.55 59.09 63.64 68.18 70.45 72.73 72.73 77.27 77.27 79.55 GDT RMS_LOCAL 0.30 0.43 0.67 0.67 1.92 2.20 2.62 2.67 2.80 3.17 3.95 4.09 4.39 4.95 4.97 5.11 5.12 5.60 5.48 5.71 GDT RMS_ALL_AT 10.19 9.99 9.67 9.67 11.09 10.91 10.11 10.64 10.24 9.81 9.10 9.13 9.04 9.13 9.01 9.05 8.95 8.93 8.91 8.94 # Checking swapping # possible swapping detected: Y 12 Y 12 # possible swapping detected: E 27 E 27 # possible swapping detected: F 40 F 40 # Molecule1 Molecule2 DISTANCE Mis MC All Dist_max GDC_mc GDC_all Dist_at LGA A 2 A 2 18.851 0 0.000 0.000 20.707 0.000 0.000 - LGA V 3 V 3 13.138 0 0.135 1.093 15.103 0.000 0.000 13.022 LGA Q 4 Q 4 9.685 0 0.068 1.144 11.604 0.000 0.000 10.556 LGA G 5 G 5 9.367 0 0.228 0.228 10.139 0.000 0.000 - LGA P 6 P 6 10.019 0 0.048 0.396 13.296 0.000 0.000 13.290 LGA W 7 W 7 13.226 0 0.488 1.302 23.544 0.000 0.000 23.056 LGA V 8 V 8 8.233 0 0.079 0.081 9.906 0.000 0.000 6.052 LGA G 9 G 9 7.704 0 0.263 0.263 7.704 0.000 0.000 - LGA S 10 S 10 6.245 0 0.677 0.649 9.133 0.000 0.000 9.133 LGA S 11 S 11 5.246 0 0.577 0.781 5.970 2.727 1.818 5.809 LGA Y 12 Y 12 7.099 0 0.640 1.144 9.239 0.000 1.667 4.615 LGA V 13 V 13 7.716 0 0.077 0.968 12.086 0.000 0.000 7.051 LGA A 14 A 14 13.929 0 0.621 0.602 15.847 0.000 0.000 - LGA E 15 E 15 17.873 0 0.006 0.880 24.327 0.000 0.000 24.327 LGA T 16 T 16 17.896 0 0.075 0.076 19.645 0.000 0.000 16.746 LGA G 17 G 17 13.255 0 0.299 0.299 14.788 0.000 0.000 - LGA Q 18 Q 18 9.665 0 0.671 0.730 15.452 0.000 0.000 12.501 LGA N 19 N 19 4.109 0 0.051 0.954 6.575 18.636 11.591 6.575 LGA W 20 W 20 2.296 0 0.645 0.532 11.751 48.182 13.766 11.751 LGA A 21 A 21 1.020 0 0.058 0.054 2.235 74.091 66.909 - LGA S 22 S 22 3.133 0 0.049 0.621 4.324 25.455 22.424 2.615 LGA L 23 L 23 3.139 0 0.000 0.121 6.732 30.455 15.909 6.509 LGA A 24 A 24 1.800 0 0.006 0.031 2.320 54.545 51.273 - LGA A 25 A 25 1.703 0 0.192 0.201 2.827 59.091 52.727 - LGA N 26 N 26 1.985 0 0.239 0.237 4.445 51.364 31.364 3.825 LGA E 27 E 27 3.123 0 0.449 0.747 7.922 23.636 10.707 7.922 LGA L 28 L 28 2.963 0 0.185 0.196 7.686 32.727 16.591 7.686 LGA R 29 R 29 1.171 0 0.499 1.656 6.966 40.000 19.835 6.966 LGA V 30 V 30 2.106 0 0.109 1.055 6.118 45.455 26.753 5.765 LGA T 31 T 31 2.776 0 0.684 0.600 6.654 45.000 25.714 5.856 LGA E 32 E 32 2.112 0 0.664 0.577 4.433 30.455 18.990 3.958 LGA R 33 R 33 3.368 0 0.125 1.315 15.891 18.636 6.777 15.891 LGA P 34 P 34 2.174 0 0.637 0.637 4.215 30.000 27.532 3.422 LGA F 35 F 35 2.430 0 0.655 0.459 9.936 59.091 21.653 9.936 LGA W 36 W 36 2.415 0 0.660 0.524 8.777 52.273 15.584 8.777 LGA I 37 I 37 4.241 0 0.131 0.857 8.410 4.091 2.045 7.487 LGA S 38 S 38 9.001 0 0.079 0.621 11.844 0.000 0.000 11.844 LGA S 39 S 39 8.915 0 0.361 0.725 12.883 0.000 0.000 9.640 LGA F 40 F 40 12.395 0 0.641 1.192 14.248 0.000 0.000 9.595 LGA I 41 I 41 16.529 0 0.634 1.385 19.778 0.000 0.000 17.492 LGA G 42 G 42 19.857 0 0.720 0.720 20.856 0.000 0.000 - LGA R 43 R 43 19.207 0 0.083 0.847 22.352 0.000 0.000 17.031 LGA S 44 S 44 22.942 0 0.133 0.658 25.452 0.000 0.000 25.452 LGA K 45 K 45 23.943 0 0.662 0.749 30.362 0.000 0.000 30.362 # RMSD_GDC results: CA MC common percent ALL common percent GDC_mc GDC_all GDC_at NUMBER_OF_ATOMS_AA: 44 176 176 100.00 344 344 100.00 44 35 SUMMARY(RMSD_GDC): 8.592 8.608 10.001 16.952 10.492 1.974 #CA N1 N2 DIST N RMSD GDT_TS LGA_S3 LGA_Q SUMMARY(GDT) 44 44 4.0 19 2.67 39.773 34.728 0.686 LGA_LOCAL RMSD: 2.668 Number of atoms: 19 under DIST: 4.00 LGA_ASGN_ATOMS RMSD: 10.635 Number of assigned atoms: 44 Std_ASGN_ATOMS RMSD: 8.592 Standard rmsd on all 44 assigned CA atoms Unitary ROTATION matrix and the SHIFT vector superimpose molecules (1=>2) X_new = -0.642774 * X + 0.560972 * Y + 0.521682 * Z + -201.694092 Y_new = -0.574464 * X + 0.097543 * Y + -0.812697 * Z + 303.390747 Z_new = -0.506787 * X + -0.822068 * Y + 0.259560 * Z + 206.176361 Euler angles from the ROTATION matrix. Conventions XYZ and ZXZ: Phi Theta Psi [DEG: Phi Theta Psi ] XYZ: -2.412254 0.531453 -1.264962 [DEG: -138.2120 30.4500 -72.4770 ] ZXZ: 0.570671 1.308230 -2.589145 [DEG: 32.6970 74.9560 -148.3471 ] # END of job REMARK ---------------------------------------------------------- REMARK Citing LGA: REMARK Zemla A., LGA - a Method for Finding 3D Similarities in REMARK Protein Structures, Nucleic Acids Research, 2003, V. 31, REMARK No. 13, pp. 3370-3374. REMARK ---------------------------------------------------------- REMARK Superimposed MOLECULES (1=>2) Output: 1 molecule REMARK 1: T0953s2TS086_3-D1 REMARK 2: T0953s2-D1.pdb REMARK GDT and LCS analysis REMARK FIXED Atom-Atom correspondence REMARK LGA parameters: -3 -ie -o1 -sda -d:4 -gdc_sc -swap T0953s2TS086_3-D1.lga REMARK #CA N1 N2 DIST N RMSD LGA_S3 RMSD_global REMARK SUMMARY: 44 44 4.0 19 2.67 34.728 8.59 REMARK ---------------------------------------------------------- MOLECULE T0953s2TS086_3-D1 PFRMAT TS TARGET T0953s2 MODEL 3 PARENT N/A ATOM 20 N ALA 2 -0.624 32.520 -2.815 1.00 7.00 N ATOM 21 CA ALA 2 -0.590 32.592 -1.359 1.00 7.00 C ATOM 22 C ALA 2 -0.392 34.038 -0.962 1.00 7.00 C ATOM 23 O ALA 2 0.078 34.850 -1.761 1.00 7.00 O ATOM 24 CB ALA 2 0.501 31.709 -0.787 1.00 7.00 C ATOM 30 N VAL 3 -0.784 34.358 0.260 1.00 7.00 N ATOM 31 CA VAL 3 -0.703 35.707 0.794 1.00 7.00 C ATOM 32 C VAL 3 0.007 35.733 2.157 1.00 7.00 C ATOM 33 O VAL 3 0.203 34.680 2.771 1.00 7.00 O ATOM 34 CB VAL 3 -2.135 36.271 0.887 1.00 7.00 C ATOM 35 CG1 VAL 3 -2.790 36.286 -0.501 1.00 7.00 C ATOM 36 CG2 VAL 3 -2.955 35.436 1.846 1.00 7.00 C ATOM 46 N GLN 4 0.371 36.934 2.641 1.00 7.00 N ATOM 47 CA GLN 4 1.031 37.067 3.953 1.00 7.00 C ATOM 48 C GLN 4 0.507 38.231 4.800 1.00 7.00 C ATOM 49 O GLN 4 -0.055 39.191 4.266 1.00 7.00 O ATOM 50 CB GLN 4 2.534 37.256 3.764 1.00 7.00 C ATOM 51 CG GLN 4 2.926 38.557 3.089 1.00 7.00 C ATOM 52 CD GLN 4 4.409 38.648 2.889 1.00 7.00 C ATOM 53 OE1 GLN 4 5.039 37.693 2.429 1.00 7.00 O ATOM 54 NE2 GLN 4 4.987 39.793 3.228 1.00 7.00 N ATOM 63 N GLY 5 0.682 38.137 6.129 1.00 7.00 N ATOM 64 CA GLY 5 0.234 39.196 7.049 1.00 7.00 C ATOM 65 C GLY 5 1.277 40.332 7.180 1.00 7.00 C ATOM 66 O GLY 5 2.369 40.091 7.698 1.00 7.00 O ATOM 70 N PRO 6 0.943 41.607 6.854 1.00 7.00 N ATOM 71 CA PRO 6 1.833 42.777 6.907 1.00 7.00 C ATOM 72 C PRO 6 2.445 43.131 8.290 1.00 7.00 C ATOM 73 O PRO 6 3.480 43.798 8.336 1.00 7.00 O ATOM 74 CB PRO 6 0.897 43.903 6.424 1.00 7.00 C ATOM 75 CG PRO 6 -0.144 43.223 5.589 1.00 7.00 C ATOM 76 CD PRO 6 -0.369 41.896 6.252 1.00 7.00 C ATOM 84 N TRP 7 1.837 42.693 9.400 1.00 7.00 N ATOM 85 CA TRP 7 2.354 42.958 10.748 1.00 7.00 C ATOM 86 C TRP 7 3.017 41.711 11.290 1.00 7.00 C ATOM 87 O TRP 7 4.136 41.750 11.805 1.00 7.00 O ATOM 88 CB TRP 7 1.210 43.356 11.661 1.00 7.00 C ATOM 89 CG TRP 7 1.479 43.729 13.046 1.00 7.00 C ATOM 90 CD1 TRP 7 1.885 44.943 13.488 1.00 7.00 C ATOM 91 CD2 TRP 7 1.276 42.916 14.223 1.00 7.00 C ATOM 92 NE1 TRP 7 1.967 44.939 14.855 1.00 7.00 N ATOM 93 CE2 TRP 7 1.588 43.704 15.317 1.00 7.00 C ATOM 94 CE3 TRP 7 0.845 41.614 14.427 1.00 7.00 C ATOM 95 CZ2 TRP 7 1.486 43.226 16.611 1.00 7.00 C ATOM 96 CZ3 TRP 7 0.739 41.126 15.712 1.00 7.00 C ATOM 97 CH2 TRP 7 1.051 41.911 16.777 1.00 7.00 C ATOM 108 N VAL 8 2.301 40.596 11.177 1.00 7.00 N ATOM 109 CA VAL 8 2.771 39.324 11.714 1.00 7.00 C ATOM 110 C VAL 8 4.077 38.854 11.062 1.00 7.00 C ATOM 111 O VAL 8 4.988 38.395 11.751 1.00 7.00 O ATOM 112 CB VAL 8 1.690 38.249 11.517 1.00 7.00 C ATOM 113 CG1 VAL 8 2.206 36.895 11.896 1.00 7.00 C ATOM 114 CG2 VAL 8 0.520 38.587 12.355 1.00 7.00 C ATOM 124 N GLY 9 4.154 38.918 9.730 1.00 7.00 N ATOM 125 CA GLY 9 5.344 38.510 8.992 1.00 7.00 C ATOM 126 C GLY 9 5.294 37.057 8.523 1.00 7.00 C ATOM 127 O GLY 9 6.126 36.626 7.721 1.00 7.00 O ATOM 131 N SER 10 4.340 36.296 9.037 1.00 7.00 N ATOM 132 CA SER 10 4.166 34.911 8.658 1.00 7.00 C ATOM 133 C SER 10 3.363 34.903 7.387 1.00 7.00 C ATOM 134 O SER 10 2.749 35.923 7.022 1.00 7.00 O ATOM 135 CB SER 10 3.447 34.096 9.717 1.00 7.00 C ATOM 136 OG SER 10 2.104 34.471 9.827 1.00 7.00 O ATOM 142 N SER 11 3.295 33.747 6.748 1.00 7.00 N ATOM 143 CA SER 11 2.559 33.630 5.511 1.00 7.00 C ATOM 144 C SER 11 1.810 32.326 5.407 1.00 7.00 C ATOM 145 O SER 11 2.064 31.375 6.147 1.00 7.00 O ATOM 146 CB SER 11 3.514 33.764 4.343 1.00 7.00 C ATOM 147 OG SER 11 4.444 32.713 4.325 1.00 7.00 O ATOM 153 N TYR 12 0.863 32.322 4.485 1.00 7.00 N ATOM 154 CA TYR 12 0.012 31.198 4.183 1.00 7.00 C ATOM 155 C TYR 12 0.687 30.223 3.240 1.00 7.00 C ATOM 156 O TYR 12 1.460 30.628 2.372 1.00 7.00 O ATOM 157 CB TYR 12 -1.234 31.693 3.467 1.00 7.00 C ATOM 158 CG TYR 12 -2.289 32.512 4.213 1.00 7.00 C ATOM 159 CD1 TYR 12 -2.012 33.743 4.842 1.00 7.00 C ATOM 160 CD2 TYR 12 -3.584 32.066 4.153 1.00 7.00 C ATOM 161 CE1 TYR 12 -3.056 34.483 5.378 1.00 7.00 C ATOM 162 CE2 TYR 12 -4.591 32.789 4.677 1.00 7.00 C ATOM 163 CZ TYR 12 -4.356 33.995 5.271 1.00 7.00 C ATOM 164 OH TYR 12 -5.426 34.726 5.731 1.00 7.00 O ATOM 174 N VAL 13 0.338 28.942 3.359 1.00 7.00 N ATOM 175 CA VAL 13 0.799 27.951 2.394 1.00 7.00 C ATOM 176 C VAL 13 0.091 28.176 1.051 1.00 7.00 C ATOM 177 O VAL 13 0.650 27.927 -0.016 1.00 7.00 O ATOM 178 CB VAL 13 0.571 26.510 2.917 1.00 7.00 C ATOM 179 CG1 VAL 13 -0.922 26.104 2.882 1.00 7.00 C ATOM 180 CG2 VAL 13 1.394 25.541 2.084 1.00 7.00 C ATOM 190 N ALA 14 -1.162 28.617 1.132 1.00 7.00 N ATOM 191 CA ALA 14 -2.008 28.898 -0.015 1.00 7.00 C ATOM 192 C ALA 14 -2.997 29.984 0.375 1.00 7.00 C ATOM 193 O ALA 14 -3.391 30.079 1.531 1.00 7.00 O ATOM 194 CB ALA 14 -2.726 27.643 -0.467 1.00 7.00 C ATOM 200 N GLU 15 -3.477 30.744 -0.593 1.00 7.00 N ATOM 201 CA GLU 15 -4.422 31.845 -0.356 1.00 7.00 C ATOM 202 C GLU 15 -5.684 31.444 0.411 1.00 7.00 C ATOM 203 O GLU 15 -6.200 32.218 1.229 1.00 7.00 O ATOM 204 CB GLU 15 -4.813 32.481 -1.688 1.00 7.00 C ATOM 205 CG GLU 15 -5.697 33.710 -1.565 1.00 7.00 C ATOM 206 CD GLU 15 -5.974 34.354 -2.889 1.00 7.00 C ATOM 207 OE1 GLU 15 -5.665 33.759 -3.895 1.00 7.00 O ATOM 208 OE2 GLU 15 -6.486 35.447 -2.900 1.00 7.00 O ATOM 215 N THR 16 -6.180 30.241 0.146 1.00 7.00 N ATOM 216 CA THR 16 -7.392 29.733 0.757 1.00 7.00 C ATOM 217 C THR 16 -7.121 29.008 2.075 1.00 7.00 C ATOM 218 O THR 16 -8.044 28.547 2.758 1.00 7.00 O ATOM 219 CB THR 16 -8.112 28.794 -0.223 1.00 7.00 C ATOM 220 OG1 THR 16 -7.233 27.711 -0.570 1.00 7.00 O ATOM 221 CG2 THR 16 -8.491 29.565 -1.485 1.00 7.00 C ATOM 229 N GLY 17 -5.856 28.932 2.474 1.00 7.00 N ATOM 230 CA GLY 17 -5.435 28.255 3.689 1.00 7.00 C ATOM 231 C GLY 17 -5.668 29.158 4.889 1.00 7.00 C ATOM 232 O GLY 17 -4.734 29.531 5.591 1.00 7.00 O ATOM 236 N GLN 18 -6.934 29.456 5.152 1.00 7.00 N ATOM 237 CA GLN 18 -7.373 30.423 6.161 1.00 7.00 C ATOM 238 C GLN 18 -6.951 30.064 7.581 1.00 7.00 C ATOM 239 O GLN 18 -6.876 30.932 8.456 1.00 7.00 O ATOM 240 CB GLN 18 -8.872 30.644 6.020 1.00 7.00 C ATOM 241 CG GLN 18 -9.230 31.365 4.692 1.00 7.00 C ATOM 242 CD GLN 18 -8.694 32.805 4.647 1.00 7.00 C ATOM 243 OE1 GLN 18 -8.995 33.565 5.572 1.00 7.00 O ATOM 244 NE2 GLN 18 -7.910 33.194 3.620 1.00 7.00 N ATOM 253 N ASN 19 -6.578 28.807 7.791 1.00 7.00 N ATOM 254 CA ASN 19 -6.089 28.355 9.084 1.00 7.00 C ATOM 255 C ASN 19 -4.830 29.154 9.456 1.00 7.00 C ATOM 256 O ASN 19 -4.513 29.314 10.637 1.00 7.00 O ATOM 257 CB ASN 19 -5.780 26.876 9.048 1.00 7.00 C ATOM 258 CG ASN 19 -7.017 26.031 9.007 1.00 7.00 C ATOM 259 OD1 ASN 19 -8.118 26.470 9.357 1.00 7.00 O ATOM 260 ND2 ASN 19 -6.859 24.809 8.575 1.00 7.00 N ATOM 267 N TRP 20 -4.115 29.657 8.444 1.00 7.00 N ATOM 268 CA TRP 20 -2.912 30.426 8.659 1.00 7.00 C ATOM 269 C TRP 20 -3.223 31.782 9.261 1.00 7.00 C ATOM 270 O TRP 20 -2.358 32.374 9.906 1.00 7.00 O ATOM 271 CB TRP 20 -2.138 30.523 7.362 1.00 7.00 C ATOM 272 CG TRP 20 -1.493 29.220 7.072 1.00 7.00 C ATOM 273 CD1 TRP 20 -1.915 28.253 6.215 1.00 7.00 C ATOM 274 CD2 TRP 20 -0.282 28.726 7.663 1.00 7.00 C ATOM 275 NE1 TRP 20 -1.067 27.191 6.253 1.00 7.00 N ATOM 276 CE2 TRP 20 -0.059 27.461 7.129 1.00 7.00 C ATOM 277 CE3 TRP 20 0.616 29.247 8.597 1.00 7.00 C ATOM 278 CZ2 TRP 20 1.023 26.693 7.497 1.00 7.00 C ATOM 279 CZ3 TRP 20 1.705 28.478 8.968 1.00 7.00 C ATOM 280 CH2 TRP 20 1.902 27.231 8.432 1.00 7.00 C ATOM 291 N ALA 21 -4.435 32.310 9.040 1.00 7.00 N ATOM 292 CA ALA 21 -4.813 33.565 9.656 1.00 7.00 C ATOM 293 C ALA 21 -4.998 33.313 11.144 1.00 7.00 C ATOM 294 O ALA 21 -4.528 34.075 11.993 1.00 7.00 O ATOM 295 CB ALA 21 -6.089 34.090 9.058 1.00 7.00 C ATOM 301 N SER 22 -5.634 32.176 11.458 1.00 7.00 N ATOM 302 CA SER 22 -5.882 31.811 12.849 1.00 7.00 C ATOM 303 C SER 22 -4.565 31.648 13.600 1.00 7.00 C ATOM 304 O SER 22 -4.471 31.968 14.787 1.00 7.00 O ATOM 305 CB SER 22 -6.692 30.527 12.948 1.00 7.00 C ATOM 306 OG SER 22 -7.989 30.693 12.429 1.00 7.00 O ATOM 312 N LEU 23 -3.555 31.105 12.915 1.00 7.00 N ATOM 313 CA LEU 23 -2.231 30.943 13.504 1.00 7.00 C ATOM 314 C LEU 23 -1.495 32.291 13.589 1.00 7.00 C ATOM 315 O LEU 23 -0.830 32.596 14.581 1.00 7.00 O ATOM 316 CB LEU 23 -1.400 29.957 12.658 1.00 7.00 C ATOM 317 CG LEU 23 -1.869 28.459 12.628 1.00 7.00 C ATOM 318 CD1 LEU 23 -1.058 27.698 11.559 1.00 7.00 C ATOM 319 CD2 LEU 23 -1.669 27.811 13.999 1.00 7.00 C ATOM 331 N ALA 24 -1.610 33.120 12.546 1.00 7.00 N ATOM 332 CA ALA 24 -0.962 34.429 12.491 1.00 7.00 C ATOM 333 C ALA 24 -1.449 35.329 13.631 1.00 7.00 C ATOM 334 O ALA 24 -0.659 36.018 14.281 1.00 7.00 O ATOM 335 CB ALA 24 -1.240 35.059 11.133 1.00 7.00 C ATOM 341 N ALA 25 -2.726 35.185 13.979 1.00 7.00 N ATOM 342 CA ALA 25 -3.406 35.934 15.037 1.00 7.00 C ATOM 343 C ALA 25 -2.779 35.729 16.410 1.00 7.00 C ATOM 344 O ALA 25 -3.153 36.412 17.360 1.00 7.00 O ATOM 345 CB ALA 25 -4.878 35.543 15.098 1.00 7.00 C ATOM 351 N ASN 26 -1.950 34.698 16.576 1.00 7.00 N ATOM 352 CA ASN 26 -1.342 34.435 17.865 1.00 7.00 C ATOM 353 C ASN 26 0.131 34.910 17.942 1.00 7.00 C ATOM 354 O ASN 26 0.836 34.629 18.925 1.00 7.00 O ATOM 355 CB ASN 26 -1.464 32.953 18.147 1.00 7.00 C ATOM 356 CG ASN 26 -2.931 32.526 18.270 1.00 7.00 C ATOM 357 OD1 ASN 26 -3.785 33.225 18.829 1.00 7.00 O ATOM 358 ND2 ASN 26 -3.238 31.372 17.736 1.00 7.00 N ATOM 365 N GLU 27 0.618 35.650 16.928 1.00 7.00 N ATOM 366 CA GLU 27 2.031 36.083 16.893 1.00 7.00 C ATOM 367 C GLU 27 2.287 37.367 17.682 1.00 7.00 C ATOM 368 O GLU 27 2.615 38.419 17.132 1.00 7.00 O ATOM 369 CB GLU 27 2.506 36.290 15.464 1.00 7.00 C ATOM 370 CG GLU 27 4.054 36.527 15.294 1.00 7.00 C ATOM 371 CD GLU 27 4.864 35.292 15.609 1.00 7.00 C ATOM 372 OE1 GLU 27 4.404 34.216 15.307 1.00 7.00 O ATOM 373 OE2 GLU 27 5.940 35.422 16.146 1.00 7.00 O ATOM 380 N LEU 28 2.154 37.227 18.981 1.00 7.00 N ATOM 381 CA LEU 28 2.308 38.285 19.989 1.00 7.00 C ATOM 382 C LEU 28 1.454 39.595 19.905 1.00 7.00 C ATOM 383 O LEU 28 2.009 40.659 20.181 1.00 7.00 O ATOM 384 CB LEU 28 3.785 38.709 20.013 1.00 7.00 C ATOM 385 CG LEU 28 4.837 37.588 20.279 1.00 7.00 C ATOM 386 CD1 LEU 28 6.222 38.193 20.172 1.00 7.00 C ATOM 387 CD2 LEU 28 4.627 36.961 21.668 1.00 7.00 C ATOM 399 N ARG 29 0.126 39.597 19.587 1.00 7.00 N ATOM 400 CA ARG 29 -0.747 38.497 19.169 1.00 7.00 C ATOM 401 C ARG 29 -1.548 38.955 17.947 1.00 7.00 C ATOM 402 O ARG 29 -1.295 38.547 16.815 1.00 7.00 O ATOM 403 CB ARG 29 -1.713 38.113 20.300 1.00 7.00 C ATOM 404 CG ARG 29 -1.055 37.663 21.613 1.00 7.00 C ATOM 405 CD ARG 29 -0.365 36.362 21.516 1.00 7.00 C ATOM 406 NE ARG 29 0.359 36.040 22.739 1.00 7.00 N ATOM 407 CZ ARG 29 1.260 35.042 22.890 1.00 7.00 C ATOM 408 NH1 ARG 29 1.571 34.242 21.882 1.00 7.00 N ATOM 409 NH2 ARG 29 1.848 34.864 24.064 1.00 7.00 N ATOM 423 N VAL 30 -2.478 39.877 18.191 1.00 7.00 N ATOM 424 CA VAL 30 -3.369 40.391 17.164 1.00 7.00 C ATOM 425 C VAL 30 -3.632 41.886 17.334 1.00 7.00 C ATOM 426 O VAL 30 -3.770 42.370 18.458 1.00 7.00 O ATOM 427 CB VAL 30 -4.668 39.545 17.179 1.00 7.00 C ATOM 428 CG1 VAL 30 -5.330 39.613 18.538 1.00 7.00 C ATOM 429 CG2 VAL 30 -5.661 40.015 16.115 1.00 7.00 C ATOM 439 N THR 31 -3.706 42.596 16.216 1.00 7.00 N ATOM 440 CA THR 31 -4.005 44.020 16.145 1.00 7.00 C ATOM 441 C THR 31 -5.503 44.316 16.176 1.00 7.00 C ATOM 442 O THR 31 -6.329 43.436 15.935 1.00 7.00 O ATOM 443 CB THR 31 -3.471 44.572 14.823 1.00 7.00 C ATOM 444 OG1 THR 31 -4.152 43.857 13.770 1.00 7.00 O ATOM 445 CG2 THR 31 -1.949 44.374 14.721 1.00 7.00 C ATOM 453 N GLU 32 -5.848 45.590 16.408 1.00 7.00 N ATOM 454 CA GLU 32 -7.236 46.056 16.351 1.00 7.00 C ATOM 455 C GLU 32 -7.809 46.035 14.928 1.00 7.00 C ATOM 456 O GLU 32 -9.023 45.948 14.733 1.00 7.00 O ATOM 457 CB GLU 32 -7.328 47.470 16.915 1.00 7.00 C ATOM 458 CG GLU 32 -6.945 47.568 18.376 1.00 7.00 C ATOM 459 CD GLU 32 -5.450 47.670 18.603 1.00 7.00 C ATOM 460 OE1 GLU 32 -4.703 47.592 17.639 1.00 7.00 O ATOM 461 OE2 GLU 32 -5.054 47.815 19.729 1.00 7.00 O ATOM 468 N ARG 33 -6.914 46.123 13.943 1.00 7.00 N ATOM 469 CA ARG 33 -7.257 46.105 12.532 1.00 7.00 C ATOM 470 C ARG 33 -6.710 44.803 11.899 1.00 7.00 C ATOM 471 O ARG 33 -5.502 44.719 11.636 1.00 7.00 O ATOM 472 CB ARG 33 -6.680 47.315 11.826 1.00 7.00 C ATOM 473 CG ARG 33 -7.197 48.645 12.329 1.00 7.00 C ATOM 474 CD ARG 33 -6.662 49.775 11.533 1.00 7.00 C ATOM 475 NE ARG 33 -7.073 51.067 12.076 1.00 7.00 N ATOM 476 CZ ARG 33 -6.800 52.271 11.521 1.00 7.00 C ATOM 477 NH1 ARG 33 -6.127 52.352 10.389 1.00 7.00 N ATOM 478 NH2 ARG 33 -7.213 53.380 12.120 1.00 7.00 N ATOM 492 N PRO 34 -7.581 43.798 11.642 1.00 7.00 N ATOM 493 CA PRO 34 -7.305 42.446 11.152 1.00 7.00 C ATOM 494 C PRO 34 -6.434 42.306 9.919 1.00 7.00 C ATOM 495 O PRO 34 -5.734 41.298 9.769 1.00 7.00 O ATOM 496 CB PRO 34 -8.706 41.945 10.820 1.00 7.00 C ATOM 497 CG PRO 34 -9.595 42.650 11.793 1.00 7.00 C ATOM 498 CD PRO 34 -9.033 44.006 11.924 1.00 7.00 C ATOM 506 N PHE 35 -6.443 43.279 9.018 1.00 7.00 N ATOM 507 CA PHE 35 -5.645 43.127 7.813 1.00 7.00 C ATOM 508 C PHE 35 -4.183 42.849 8.064 1.00 7.00 C ATOM 509 O PHE 35 -3.559 42.169 7.240 1.00 7.00 O ATOM 510 CB PHE 35 -5.759 44.357 6.933 1.00 7.00 C ATOM 511 CG PHE 35 -5.005 45.554 7.360 1.00 7.00 C ATOM 512 CD1 PHE 35 -3.708 45.763 6.911 1.00 7.00 C ATOM 513 CD2 PHE 35 -5.582 46.493 8.183 1.00 7.00 C ATOM 514 CE1 PHE 35 -3.015 46.880 7.280 1.00 7.00 C ATOM 515 CE2 PHE 35 -4.887 47.609 8.546 1.00 7.00 C ATOM 516 CZ PHE 35 -3.608 47.803 8.092 1.00 7.00 C ATOM 526 N TRP 36 -3.677 43.297 9.224 1.00 7.00 N ATOM 527 CA TRP 36 -2.299 43.165 9.655 1.00 7.00 C ATOM 528 C TRP 36 -1.879 41.704 9.908 1.00 7.00 C ATOM 529 O TRP 36 -0.682 41.355 9.893 1.00 7.00 O ATOM 530 CB TRP 36 -2.130 43.944 10.965 1.00 7.00 C ATOM 531 CG TRP 36 -2.005 45.486 10.912 1.00 7.00 C ATOM 532 CD1 TRP 36 -2.837 46.384 11.506 1.00 7.00 C ATOM 533 CD2 TRP 36 -1.003 46.283 10.233 1.00 7.00 C ATOM 534 NE1 TRP 36 -2.405 47.665 11.273 1.00 7.00 N ATOM 535 CE2 TRP 36 -1.292 47.618 10.497 1.00 7.00 C ATOM 536 CE3 TRP 36 0.089 45.980 9.456 1.00 7.00 C ATOM 537 CZ2 TRP 36 -0.517 48.643 9.995 1.00 7.00 C ATOM 538 CZ3 TRP 36 0.867 46.988 8.949 1.00 7.00 C ATOM 539 CH2 TRP 36 0.574 48.293 9.212 1.00 7.00 C ATOM 550 N ILE 37 -2.867 40.871 10.216 1.00 7.00 N ATOM 551 CA ILE 37 -2.681 39.473 10.562 1.00 7.00 C ATOM 552 C ILE 37 -3.096 38.574 9.417 1.00 7.00 C ATOM 553 O ILE 37 -2.350 37.692 8.986 1.00 7.00 O ATOM 554 CB ILE 37 -3.526 39.118 11.828 1.00 7.00 C ATOM 555 CG1 ILE 37 -2.831 39.526 13.168 1.00 7.00 C ATOM 556 CG2 ILE 37 -3.829 37.637 11.905 1.00 7.00 C ATOM 557 CD1 ILE 37 -2.442 40.956 13.311 1.00 7.00 C ATOM 569 N SER 38 -4.310 38.803 8.930 1.00 7.00 N ATOM 570 CA SER 38 -4.928 37.941 7.942 1.00 7.00 C ATOM 571 C SER 38 -4.636 38.210 6.464 1.00 7.00 C ATOM 572 O SER 38 -5.002 37.373 5.637 1.00 7.00 O ATOM 573 CB SER 38 -6.412 37.950 8.161 1.00 7.00 C ATOM 574 OG SER 38 -6.764 37.346 9.386 1.00 7.00 O ATOM 580 N SER 39 -3.936 39.305 6.121 1.00 7.00 N ATOM 581 CA SER 39 -3.636 39.669 4.730 1.00 7.00 C ATOM 582 C SER 39 -4.883 40.117 3.984 1.00 7.00 C ATOM 583 O SER 39 -5.322 39.524 2.996 1.00 7.00 O ATOM 584 CB SER 39 -3.005 38.527 3.968 1.00 7.00 C ATOM 585 OG SER 39 -2.292 39.034 2.880 1.00 7.00 O ATOM 591 N PHE 40 -5.475 41.175 4.501 1.00 7.00 N ATOM 592 CA PHE 40 -6.680 41.743 3.903 1.00 7.00 C ATOM 593 C PHE 40 -6.384 43.072 3.234 1.00 7.00 C ATOM 594 O PHE 40 -5.355 43.693 3.490 1.00 7.00 O ATOM 595 CB PHE 40 -7.804 41.974 4.918 1.00 7.00 C ATOM 596 CG PHE 40 -8.347 40.777 5.625 1.00 7.00 C ATOM 597 CD1 PHE 40 -8.509 39.545 4.996 1.00 7.00 C ATOM 598 CD2 PHE 40 -8.746 40.906 6.942 1.00 7.00 C ATOM 599 CE1 PHE 40 -9.054 38.484 5.675 1.00 7.00 C ATOM 600 CE2 PHE 40 -9.295 39.838 7.618 1.00 7.00 C ATOM 601 CZ PHE 40 -9.450 38.632 6.981 1.00 7.00 C ATOM 611 N ILE 41 -7.287 43.477 2.334 1.00 7.00 N ATOM 612 CA ILE 41 -7.232 44.774 1.649 1.00 7.00 C ATOM 613 C ILE 41 -7.337 45.962 2.621 1.00 7.00 C ATOM 614 O ILE 41 -6.902 47.072 2.313 1.00 7.00 O ATOM 615 CB ILE 41 -8.340 44.856 0.568 1.00 7.00 C ATOM 616 CG1 ILE 41 -8.033 46.035 -0.406 1.00 7.00 C ATOM 617 CG2 ILE 41 -9.738 45.002 1.222 1.00 7.00 C ATOM 618 CD1 ILE 41 -8.859 46.037 -1.690 1.00 7.00 C ATOM 630 N GLY 42 -7.955 45.723 3.771 1.00 7.00 N ATOM 631 CA GLY 42 -8.156 46.716 4.809 1.00 7.00 C ATOM 632 C GLY 42 -8.794 46.038 6.006 1.00 7.00 C ATOM 633 O GLY 42 -8.988 44.821 6.005 1.00 7.00 O ATOM 637 N ARG 43 -9.097 46.793 7.048 1.00 7.00 N ATOM 638 CA ARG 43 -9.631 46.162 8.252 1.00 7.00 C ATOM 639 C ARG 43 -10.960 45.456 7.989 1.00 7.00 C ATOM 640 O ARG 43 -11.839 46.003 7.319 1.00 7.00 O ATOM 641 CB ARG 43 -9.803 47.191 9.363 1.00 7.00 C ATOM 642 CG ARG 43 -10.893 48.230 9.152 1.00 7.00 C ATOM 643 CD ARG 43 -10.859 49.271 10.214 1.00 7.00 C ATOM 644 NE ARG 43 -11.158 48.696 11.533 1.00 7.00 N ATOM 645 CZ ARG 43 -11.221 49.375 12.696 1.00 7.00 C ATOM 646 NH1 ARG 43 -11.029 50.680 12.724 1.00 7.00 N ATOM 647 NH2 ARG 43 -11.481 48.718 13.817 1.00 7.00 N ATOM 661 N SER 44 -11.105 44.255 8.546 1.00 7.00 N ATOM 662 CA SER 44 -12.316 43.457 8.443 1.00 7.00 C ATOM 663 C SER 44 -13.099 43.421 9.730 1.00 7.00 C ATOM 664 O SER 44 -12.762 44.073 10.722 1.00 7.00 O ATOM 665 CB SER 44 -12.001 42.024 8.055 1.00 7.00 C ATOM 666 OG SER 44 -13.187 41.256 7.898 1.00 7.00 O ATOM 672 N LYS 45 -14.140 42.612 9.708 1.00 7.00 N ATOM 673 CA LYS 45 -15.014 42.417 10.848 1.00 7.00 C ATOM 674 C LYS 45 -14.765 41.069 11.515 1.00 7.00 C ATOM 675 O LYS 45 -15.043 40.890 12.701 1.00 7.00 O ATOM 676 CB LYS 45 -16.461 42.510 10.396 1.00 7.00 C ATOM 677 CG LYS 45 -16.867 43.891 9.899 1.00 7.00 C ATOM 678 CD LYS 45 -18.340 43.918 9.500 1.00 7.00 C ATOM 679 CE LYS 45 -18.771 45.309 9.056 1.00 7.00 C ATOM 680 NZ LYS 45 -20.204 45.342 8.633 1.00 7.00 N TER 3519 END